RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr7	6694922	G	C	0.00996	ZNF316	+	FALSE
chr1	23519110	G	A	0.00268	HTR1D	-	FALSE	AluSc	SINE,Alu
chr1	9324451	C	T	0.00266	H6PD	+	FALSE
chr11	82686151	T	C	0.00404	RAB30	-	FALSE
chr1	12677547	G	A	0.00543	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	27634734	G	A	0.00978	WDTC1	+	FALSE
chr1	1593060	T	C	0.00538	CDK11B,SLC35E2B	-	FALSE
chr1	569492	T	C	0.00743		.	FALSE
chr7	129251289	C	T	0.00808		.	FALSE
chr15	41593269	A	G	0.00196		.	FALSE	AluSz6	SINE,Alu
chr1	151846854	T	G	0.00626	THEM4	-	FALSE	AluSx	SINE,Alu
chrX	77083641	T	C	0.00055	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	70718271	G	A	0.00273		.	FALSE
chr1	71531596	A	G	0.00016	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr1	210004199	C	G	0.00531	DIEXF	+	FALSE
chr1	91486838	G	C	0.00370	ZNF644	-	FALSE
chr4	17803681	T	C	3.85233E-06	DCAF16	-	TRUE	AluY	SINE,Alu
chr10	75008965	T	C	0.00017	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr10	75009651	T	C	0.00558	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	97543764	C	T	0.00353	DPYD	-	FALSE
chr4	3514539	G	A	6.66134E-16	LRPAP1	-	FALSE
chr5	130537154	A	G	0.00951	LYRM7	+	TRUE	AluSp	SINE,Alu
chr3	40503562	G	A	0.00017	RPL14	+	FALSE
chr1	148556726	G	T	0.00758		.	FALSE
chr11	118621699	T	C	0.00108	DDX6	-	FALSE
chr1	168218660	A	G	0.00296		.	FALSE	AluSz	SINE,Alu
chr3	196659892	T	G	0.00620	SENP5	+	FALSE	AluSz	SINE,Alu
chr1	10521238	T	C	0.00795	DFFA	-	TRUE	AluY	SINE,Alu
chr1	16919961	C	T	0.00133	NBPF1	-	FALSE
chr3	156259229	T	C	1.62025E-06	SSR3	-	TRUE	AluSq2	SINE,Alu
chr14	74524774	T	C	0.00481	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr1	31344952	C	T	0.00842	SDC3	-	FALSE
chr2	191556847	G	T	9.96724E-06	NAB1	+	FALSE
chr2	37230734	C	T	0.00025	HEATR5B	-	FALSE
chr8	11701297	T	C	0.00288	CTSB	-	TRUE	AluSx1	SINE,Alu
chr9	136209396	C	T	0.00126	MED22	-	FALSE
chr1	207247478	C	T	0.00995	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr1	36068276	T	C	0.00339	PSMB2	-	TRUE	AluSc	SINE,Alu
chrX	123045103	A	G	0.00996	XIAP	+	TRUE	AluSp	SINE,Alu
chr19	42376675	A	G	0.00085		.	FALSE
chr2	37328042	T	C	6.80414E-06		.	FALSE
chr7	137612916	G	C	0.00356	CREB3L2	-	FALSE
chr14	50792961	G	A	0.00547		.	FALSE	AluSx	SINE,Alu
chr1	173834225	T	C	0.00105	GAS5	-	FALSE	AluSz	SINE,Alu
chr7	22765456	G	T	5.19964E-05	LOC541472	-	FALSE
chr1	32661594	C	T	0.00725	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	160966376	T	C	0.00996	F11R	-	TRUE	AluSg	SINE,Alu
chr2	172412008	C	G	0.00982	CYBRD1	+	FALSE
chr9	28403	G	T	1.21037E-06	WASH1	-	FALSE	MIR	SINE,Alu
chr1	93603188	A	G	0.00374	MTF2	+	FALSE
chr2	109401259	C	T	0.00889	RANBP2	+	FALSE
chr1	104097685	C	T	0.00721	RNPC3,AMY2B	+	FALSE
chr2	37327702	T	C	8.81739E-07		.	FALSE
chr1	19578192	G	A	0.00246	MRTO4	+	FALSE
chr1	179042482	A	G	1.77761E-07	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	229652587	T	C	0.00732	ABCB10	-	FALSE
chr1	40923019	G	A	0.00019	ZFP69B	+	FALSE
chr3	40503729	A	G	5.91625E-05	RPL14	+	FALSE
chr1	144868170	C	T	0.00750	NBPF20,PDE4DIP	+,-	FALSE
chr1	68940887	T	G	0.00293	DEPDC1	-	FALSE	MIR	SINE,Alu
chr1	47843356	A	T	0.00556	CMPK1	+	FALSE
chr19	12742290	A	G	0.00564		.	FALSE	AluSx	SINE,Alu
chr9	21331119	C	T	0.00343	KLHL9	-	FALSE	L1M	SINE,Alu
chr19	54627915	C	T	0.00015	PRPF31	+	FALSE
chr1	87573963	T	C	0.00787	HS2ST1	+	FALSE
chr1	6282383	T	C	0.00371	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	145513098	A	G	0.00171	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	19542269	T	C	0.00744	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr4	169911126	C	A	0.00122	CBR4	-	FALSE
chr7	29963082	G	A	0.00118	SCRN1	-	FALSE
chr1	15989141	C	G	0.00677		.	FALSE
chr5	95130804	C	T	0.00792	RHOBTB3	+	FALSE	AluSz	SINE,Alu
chr8	30536544	T	C	0.00122	GSR	-	TRUE	AluSp	SINE,Alu
chr1	40306898	T	C	9.21891E-07	TRIT1	-	FALSE
chr1	19586519	A	G	0.00310	MRTO4	+	TRUE	AluSz	SINE,Alu
chr22	39259541	A	G	0.00134	CBX6	-	FALSE
chr5	53841241	T	A	0.00179	SNX18	+	FALSE
chr1	33149443	A	G	0.00327	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	118420452	C	G	0.00713	GDAP2	-	FALSE
chr1	788840	T	C	0.00299	LINC01128	+	FALSE
chr1	9328120	A	G	0.00024	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	949472	G	A	9.07885E-12	ISG15	+	FALSE
chr1	144873887	C	T	0.00088	NBPF20,PDE4DIP	+,-	FALSE
chr1	16011005	G	C	0.00616	PLEKHM2	+	FALSE	(GCG)n	SINE,Alu
chr6	42061234	T	C	0.00170		.	FALSE	AluSx1	SINE,Alu
chr5	478174	C	T	0.00392	SLC9A3,LOC100288152	+,-	FALSE
chr6	33377511	T	C	5.31992E-06		.	FALSE	(TG)n	SINE,Alu
chr17	49042242	T	C	0.00054	SPAG9	-	TRUE	AluJb	SINE,Alu
chr5	112350098	C	T	7.36383E-05	DCP2	+	FALSE
chr17	3561396	C	T	0.00322	CTNS	+	FALSE
chr1	33147934	A	G	0.00251	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	28835934	A	G	0.00596	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	21795388	A	G	0.00732	NBPF3	+	FALSE
chr6	26095462	A	G	0.00113	HFE	+	TRUE	AluY	SINE,Alu
chr1	16909216	G	C	0.00232	NBPF1	-	FALSE
chr2	201842434	T	C	1.94652E-05	FAM126B	-	TRUE	AluJb	SINE,Alu
chr2	37328034	T	C	0.00046		.	FALSE
chr1	53291425	A	G	2.55913E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	3545191	C	T	0.00165	TPRG1L	+	FALSE
chr2	9629293	T	G	0.00426	ADAM17	-	FALSE	(TGT)n	SINE,Alu
chr1	16892135	G	A	0.00221	NBPF1	-	FALSE
chr1	45242861	A	G	0.00911	RPS8	+	TRUE	AluSz	SINE,Alu
chr5	175811094	C	T	0.00700	NOP16	-	FALSE
chr1	177976440	C	T	0.00148	LOC730102	-	FALSE
chr11	61732461	G	T	2.02182E-05	FTH1	-	FALSE
chr2	39009425	A	G	0.00607		.	FALSE	AluSx3	SINE,Alu
chr1	108114598	C	T	0.00863	VAV3	-	FALSE
chr1	179326908	A	G	0.00037	SOAT1	+	TRUE	AluJo	SINE,Alu
chr2	3622912	G	T	0.00000	RPS7	+	FALSE
chr1	3745924	G	A	0.00612	CEP104	-	FALSE
chr1	109855152	A	C	0.00227	SORT1	-	FALSE	A-rich	SINE,Alu
chr3	49396751	T	C	0.00311	RHOA	-	FALSE
chr3	97591153	C	T	0.00866	CRYBG3	+	FALSE
chr1	40147817	C	A	0.00982	HPCAL4	-	FALSE
chr16	15023271	G	A	0.00403		.	FALSE
chr14	74526984	T	C	0.00496	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr2	37328034	T	C	0.00380		.	FALSE
chr3	172117457	C	A	0.00037	FNDC3B	+	FALSE
chr7	44841239	T	A	0.00199	PPIA	+	FALSE
chr2	11323106	G	T	0.00860	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr1	168218522	A	G	0.00153		.	FALSE	AluSz	SINE,Alu
chr1	62673225	G	A	0.00039	L1TD1	+	FALSE	L1MEd	SINE,Alu
chr14	23795222	T	G	0.00162	BCL2L2-PABPN1,PABPN1	+	FALSE
chr1	184661773	G	T	0.00082	EDEM3	-	FALSE
chr15	41590999	A	G	0.00049	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr15	49419124	T	C	1.84263E-05	COPS2	-	TRUE	MARNA	SINE,Alu
chr1	43391823	C	T	0.00718	SLC2A1	-	FALSE
chr7	27237453	C	T	0.00421	HOXA13	-	FALSE
chr1	230416399	G	T	5.37638E-05	GALNT2	+	FALSE
chr2	27001973	C	T	0.00327	SLC35F6	+	FALSE	AluSx	SINE,Alu
chr2	30863651	A	T	0.00366	LCLAT1	+	FALSE
chr1	207221096	G	A	0.00452	YOD1	-	FALSE
chr2	37329238	T	C	0.00754		.	FALSE	AluJr4	SINE,Alu
chr1	6583592	T	C	0.00012	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	31905887	A	C	0.00221	SERINC2	+	FALSE
chr14	61112736	T	G	0.00418	SIX1	-	FALSE	(T)n	SINE,Alu
chr1	145282799	G	A	0.00081	NBPF20,NOTCH2NL	+	FALSE
chr3	195404649	A	G	0.00624	SDHAP2	+	FALSE
chr1	144932200	G	T	0.00492	NBPF20,PDE4DIP	+,-	FALSE
chr1	33147947	A	G	0.00345	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	62627128	A	G	2.94675E-05	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	6282400	T	C	0.00118	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	110136328	T	A	0.00577	GNAI3	+	FALSE
chr2	231683849	A	G	0.00786	CAB39	+	FALSE
chr1	67874689	T	C	1.54545E-05	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr2	106510202	C	T	0.00854	NCK2	+	FALSE
chr1	114940227	T	C	0.00852	TRIM33	-	FALSE	(T)n	SINE,Alu
chr14	75202856	A	G	3.12821E-09	FCF1	+	TRUE	AluSx	SINE,Alu
chr3	10192596	A	G	9.40892E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	105881486	A	G	0.00042	TGFBRAP1	-	FALSE
chr2	37328082	T	C	0.00530		.	FALSE
chr1	144606963	G	T	0.00337	NBPF20	+	FALSE
chr3	42252924	G	C	0.00079	TRAK1	+	FALSE
chr5	43575020	T	C	8.37337E-06	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr12	69237077	A	G	0.00445	MDM2	+	TRUE	(GA)n	SINE,Alu
chr3	170114078	A	C	0.00219	SKIL	+	FALSE
chr18	47920424	A	G	0.00000	SKA1	+	FALSE	MER21C	SINE,Alu
chr6	36894339	G	A	0.00650	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr1	214527252	G	A	0.00181	PTPN14	-	FALSE	MADE2	SINE,Alu
chr2	101622700	A	G	0.00387	RPL31	+	FALSE
chr2	32447868	A	G	0.00663	SLC30A6	+	FALSE
chr1	169101269	T	G	0.00207	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr1	10517512	T	C	0.00498		.	FALSE	AluSx1	SINE,Alu
chr1	27204516	T	C	0.00028		.	FALSE	AluSg7	SINE,Alu
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr1	27202812	T	C	0.00353		.	FALSE	AluSq2	SINE,Alu
chr1	26144435	C	G	0.00129	SEPN1	+	FALSE
chr6	42857028	A	G	0.00064	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr9	115447534	T	C	0.00203	INIP	-	TRUE	AluJb	SINE,Alu
chr1	118502750	T	C	0.00922	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	33149486	A	G	5.00374E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	10318652	C	G	0.00047	KIF1B	+	FALSE
chr1	10042988	A	G	4.26240E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	79126336	C	G	1.94494E-06	IFI44	+	FALSE
chr3	73112378	A	G	0.00261	PPP4R2,EBLN2	+	FALSE
chr3	16301791	G	A	4.37274E-05	DPH3	-	FALSE
chr1	16932428	C	G	0.00017	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr4	177252327	A	G	2.51883E-09	SPCS3	+	TRUE
chr1	109181317	C	G	0.00166	FAM102B	+	FALSE
chr1	3545185	C	A	0.00347	TPRG1L	+	FALSE
chr1	89648329	T	C	0.00093	GBP4	-	TRUE	AluYg6	SINE,Alu
chr4	53364	G	A	0.00714	ZNF718,ZNF595	+	FALSE
chr1	226259443	C	A	0.00927	H3F3AP4,H3F3A	+	FALSE
chr1	6282215	T	C	0.00187	ICMT	-	TRUE	AluSz	SINE,Alu
chr8	27661037	A	T	0.00314	ESCO2	+	FALSE	A-rich	SINE,Alu
chr17	27872313	T	C	0.00226	TAOK1	+	FALSE
chr19	9761591	T	C	0.00516	ZNF562	-	TRUE	AluSp	SINE,Alu
chr2	91805928	T	C	0.00000		.	FALSE	MLT1H1	SINE,Alu
chr8	145159707	G	C	0.00158	MAF1	+	FALSE
chr2	65496187	G	A	0.00103	ACTR2	+	FALSE
chr2	85824711	G	A	0.00198	RNF181	+	FALSE
chr6	7310259	A	G	0.00092	SSR1	-	FALSE
chr1	67874689	T	C	1.72813E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	194789330	G	T	0.00150	XXYLT1	-	FALSE	AluJr	SINE,Alu
chr4	84525986	G	T	0.00081	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr17	73940077	T	C	0.00146	ACOX1	-	TRUE	AluJb	SINE,Alu
chr1	24862643	T	G	0.00079	RCAN3	+	FALSE
chr1	165877720	A	T	9.21169E-05	UCK2	+	FALSE
chr1	212277581	C	T	4.20326E-05	DTL	+	FALSE
chr1	21544447	G	A	0.00115	ECE1	-	FALSE
chr1	85113229	A	G	0.00687	SSX2IP	-	FALSE
chr1	1419700	A	G	0.00464	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	118170485	T	C	0.00281	FAM46C	+	FALSE	(TG)n	SINE,Alu
chr2	65496187	G	A	0.00266	ACTR2	+	FALSE
chr4	1193026	A	G	0.00471	SPON2,LOC100130872	-	FALSE	AluSp	SINE,Alu
chr1	46076543	A	G	0.00156	NASP	+	TRUE	AluSx	SINE,Alu
chr17	40176809	A	T	0.00860	NKIRAS2	+	FALSE	AluSz	SINE,Alu
chr1	16892274	A	T	0.00371	NBPF1	-	FALSE
chr12	29493734	C	T	0.00163	ERGIC2	-	FALSE
chr5	130537789	A	G	0.00822	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	16890672	G	A	0.00142	NBPF1	-	FALSE
chr6	53363500	G	T	0.00684	GCLC	-	FALSE
chr20	43954058	G	C	0.00876	SDC4	-	FALSE
chr1	179326847	A	G	0.00512	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	92862888	A	G	0.00029		.	FALSE	AluJr	SINE,Alu
chr4	2940135	T	C	5.42423E-07	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr3	65341374	T	A	0.00029	MAGI1	-	FALSE
chr4	68587786	G	T	0.00658	UBA6-AS1	+	FALSE	MER41B	SINE,Alu
chr2	37327651	T	C	0.00395		.	FALSE
chr1	19543352	T	C	0.00279	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr6	79649800	C	G	0.00864	PHIP	-	FALSE
chr1	168218735	A	G	0.00924		.	FALSE	AluSz	SINE,Alu
chr10	70742774	A	T	0.00504	DDX21	+	FALSE
chr2	91805938	A	G	0.00000		.	FALSE	MLT1H1	SINE,Alu
chr4	142945451	T	C	0.00585		.	FALSE
chr1	94335333	G	T	0.00258	DNTTIP2	-	FALSE
chr21	33974088	A	G	0.00057	C21orf59	-	FALSE
chr1	10517659	T	C	0.00513		.	FALSE	AluSx1	SINE,Alu
chr1	16889624	T	C	0.00795	NBPF1	-	TRUE
chr1	1650807	T	C	0.00096	CDK11B,CDK11A	-	FALSE
chr1	100654765	T	C	0.00254	DBT	-	TRUE	AluSz	SINE,Alu
chr2	105962339	G	A	0.00079	C2orf49	+	FALSE	AluSp	SINE,Alu
chr2	207943813	G	T	0.00619	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr1	29443675	T	C	0.00190	EPB41	+	FALSE
chr1	6283260	T	C	0.00071	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	15113736	T	C	0.00081	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	247319705	T	G	6.58458E-05	ZNF124	-	FALSE
chr7	38764459	T	C	0.00789	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	28826114	A	G	0.00264	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	173869111	C	G	0.00221		.	FALSE
chr1	19198414	G	A	0.00028	ALDH4A1	-	FALSE
chr1	67875011	G	T	0.00359	SERBP1	-	FALSE
chr7	107788257	C	T	0.00068	NRCAM	-	FALSE
chr1	1309464	C	T	3.88389E-12	AURKAIP1	-	FALSE
chr1	21810693	A	G	0.00370	NBPF3	+	FALSE	L1MC4	SINE,Alu

RBP	ZRSR2
Knock-Method	shRNA
RBP Family	zf-CCCH
Biosample Name	TF-1 cells
Tissue Type	Blood
Biosample Type	Cell line
# of Control	1
# of Treat	2
Species	Human
Data Source	GEO
Profile ID	GSE63816
Platform	GPL11154
Pubmed ID	25586593

ZRSR2 - Target Gene Network