Dataset Overview
RBP
ZRSR2
Knock-Method
shRNA
RBP Family
zf-CCCH
Biosample Name
TF-1 cells
Tissue Type
Blood
Biosample Type
Cell line
# of Control
1
# of Treat
2
Species
Human
Data Source
GEO
Profile ID
GSE63816
Platform
GPL11154
Pubmed ID
25586593
ZRSR2 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of ZRSR2
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
AACS
6.82
4.89
-0.43445
0.04206
0.59138
ABCA17P
11.88
16.11
0.49106
0.04197
0.59138
ABCA2
17.61
12.64
-0.47124
0.00125
0.07993
ABCB1
8.39
12.02
0.39691
0.01470
0.36402
ABCG2
2.13
4.61
0.87913
0.02284
0.45613
ABHD14A
7.78
5.19
-0.55816
0.04751
0.62275
ABHD14B
43.15
34.22
-0.33329
0.02473
0.47254
ABHD5
15.24
23.36
0.62186
0.00058
0.04948
AC004381.6
17.6
12.98
-0.40061
0.02554
0.48173
AC005077.14
0.89
0.47
-0.93709
0.00616
0.21878
Showing 1 to 10 of 999 entries
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Function Analysis of Target Genes of ZRSR2
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AAMDC
77552064_77552106_77532174_77532287_77553524_77553674
0.00340
-0.263
DataSet_02_97
View details
AARSD1
41114191_41114312_41113208_41113368_41116122_41116254
0.00047
-0.416
DataSet_02_97
View details
ABCA2
139904644_139904823_139904434_139904576_139905071_139905189
0.00159
-0.5
DataSet_02_97
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ABCC5
183727676_183727765_183707013_183707171_183732051_183732235
0.00057
0.476
DataSet_02_97
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ABCD3
94924162_94924199_94884010_94884144_94930330_94930429
0.00942
-0.353
DataSet_02_97
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ABCF3
183906451_183906458_183905928_183906195_183906548_183906629
0.00003
-1.0
DataSet_02_97
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ABHD11
73152205_73152402_73151897_73152065_73152657_73152793
0.00652
0.486
DataSet_02_97
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ABHD18
128887108_128887211_128886628_128886761_128904093_128904202
0.00007
0.772
DataSet_02_97
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AC002070.1
119840119_119840235_119825791_119826133_119991352_119991450
0.00017
-0.709
DataSet_02_97
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AC005154.1
30590933_30591095_30587974_30590397_30591715_30591795
0.00319
0.5
DataSet_02_97
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Showing 1 to 10 of 1,373 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AC005154.1
30616179_30616326_30618621_30618744_30608448_30608605
0.00954
0.286
DataSet_02_97
View details
AC087632.1
64634741_64634884_64658184_64658274_64592517_64592922
0.00634
0.257
DataSet_02_97
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AC087632.1
64658172_64658274_64668941_64669104_64592517_64592922
0.00160
0.028
DataSet_02_97
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AC087632.1
64658184_64658274_64668941_64669104_64592517_64592922
0.00147
0.03
DataSet_02_97
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ACY1
52019376_52019481_52019867_52019962_52018062_52018174
0.00382
-0.406
DataSet_02_97
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ADCK1
78325418_78325622_78353433_78353592_78288777_78288861
0.00045
-0.584
DataSet_02_97
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AKAP8L
15514285_15514366_15514468_15514526_15511960_15512414
0.00006
0.433
DataSet_02_97
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ALS2CR12
202195458_202195556_202207092_202207154_202195192_202195245
0.00085
-0.466
DataSet_02_97
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ANXA2
60682411_60682516_60688478_60688626_60678226_60678285
0.00003
1.0
DataSet_02_97
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AP003108.2
61205475_61205585_61213412_61213703_61205096_61205320
0.00003
0.691
DataSet_02_97
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Showing 1 to 10 of 112 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ADAM15
155034379_155034593_155034379_155034451_155034720_155034845
0.00018
0.514
DataSet_02_97
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ADD1
2910241_2911158_2910241_2910331_2916610_2916767
0.00313
-0.4
DataSet_02_97
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ADNP2
77875412_77875533_77875412_77875467_77890985_77891075
0.00170
-0.192
DataSet_02_97
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AFG3L1P
90048180_90048331_90048180_90048326_90050938_90051007
0.00002
0.838
DataSet_02_97
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AKAP8L
15514285_15514526_15514468_15514526_15511960_15512414
0.00008
-0.8
DataSet_02_97
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AKR1C2
5041391_5042858_5042741_5042858_5040816_5040939
0.00000
-0.757
DataSet_02_97
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AMZ2
66246328_66247108_66246328_66246611_66247190_66247319
0.00003
-0.667
DataSet_02_97
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ANXA1
75769113_75769258_75769113_75769256_75773437_75773517
0.00001
1.0
DataSet_02_97
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ANXA2
60644577_60644675_60644581_60644675_60643922_60644018
0.00007
-0.677
DataSet_02_97
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AP4M1
99699502_99700016_99699502_99699591_99700297_99700404
0.00498
-0.55
DataSet_02_97
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Showing 1 to 10 of 188 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AARSD1
41108420_41108577_41108420_41108521_41109154_41109212
0.00034
-0.54
DataSet_02_97
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AARSD1
41114191_41114312_41114191_41114289_41116122_41116254
0.00005
-0.725
DataSet_02_97
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AC003005.1
58016024_58016154_58016027_58016154_58002838_58002965
0.00228
0.752
DataSet_02_97
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AC005562.1
28937906_28937960_28937911_28937960_28935447_28935580
0.00037
-0.274
DataSet_02_97
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AC020915.1
58823393_58823828_58823562_58823828_58817453_58817582
0.00084
0.141
DataSet_02_97
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AC026954.2
7218649_7219097_7218649_7218974_7219594_7219646
0.00018
0.5
DataSet_02_97
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ACAD10
112186814_112187007_112186976_112187007_112186120_112186279
0.00369
-0.334
DataSet_02_97
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ACTG1
79478213_79478829_79478213_79478652_79478928_79479168
0.00184
-0.256
DataSet_02_97
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ADAMTSL5
1511623_1511771_1511623_1511726_1512961_1513018
0.00010
-0.705
DataSet_02_97
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ADCK5
145616055_145616256_145616060_145616256_145615870_145615946
0.00118
0.496
DataSet_02_97
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Showing 1 to 10 of 264 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABCA2
139917392_139918292_139917392_139917504_139918289_139918292
0.00894
-0.136
DataSet_02_97
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ABHD11
73151550_73152065_73151550_73151690_73151891_73152065
0.00596
-0.178
DataSet_02_97
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AC009053.1
74385937_74386276_74385937_74386101_74386194_74386276
0.00002
-1.0
DataSet_02_97
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ACY1
52020620_52021469_52020620_52020677_52021003_52021469
0.00269
-0.194
DataSet_02_97
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AL162258.1
153604509_153604716_153604509_153604539_153604630_153604716
0.00834
-0.462
DataSet_02_97
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AMZ2P1
62968871_62969635_62968871_62969045_62969359_62969635
0.00027
-0.296
DataSet_02_97
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ANAPC5
121764898_121766300_121764898_121765034_121766118_121766300
0.00338
-0.405
DataSet_02_97
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ANK1
41529871_41530430_41529871_41529944_41530033_41530430
0.00034
0.448
DataSet_02_97
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APEH
49712615_49713220_49712615_49712742_49713126_49713220
0.00332
-0.26
DataSet_02_97
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ARHGAP27
43480984_43481462_43480984_43481075_43481394_43481462
0.00009
0.629
DataSet_02_97
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Differential Variants in RNA (DVRs)
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
16927039
C
T
0.00040
NBPF1
-
FALSE
chr1
10519936
T
C
0.00349
.
FALSE
AluJr
SINE,Alu
chr1
32508478
C
T
0.00509
KHDRBS1
+
FALSE
chr1
109535088
G
A
0.00353
WDR47
-
FALSE
chr1
26144433
T
C
0.00476
SEPN1
+
FALSE
chr1
10517623
T
C
0.00664
.
FALSE
AluSx1
SINE,Alu
chr1
33149256
A
G
0.00286
SYNC,RBBP4
+,-
FALSE
AluSx1
SINE,Alu
chr1
10518734
T
C
0.00143
.
FALSE
AluSx1
SINE,Alu
chr1
148561090
G
A
0.00087
NBPF15
+
FALSE
chr1
100676277
A
G
0.00135
DBT
-
FALSE
Showing 1 to 10 of 268 entries
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression