EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
15215162TRIO amplification and abundant mRNA expression is associated with invasive tumor growth and rapid tumor cell proliferation in urinary bladder cancer.Am J Pathol2004 JulZheng M-
19008376The guanine nucleotide exchange factors trio, Ect2, and Vav3 mediate the invasive behavior of glioblastoma.Am J Pathol2008 DecSalhia Bdoi: 10.2353/ajpath.2008.080043
29207149Knockdown of Trio by CRISPR/Cas9 suppresses migration and invasion of cervical cancer cells.Oncol Rep2018 FebHou Cdoi: 10.3892/or.2017.6117

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr514387743SilentnovelL1259L0.39
BLCAchr514359454Missense_MutationNAE772Q0.07
BLCAchr514471432Missense_MutationnovelE1960Q0.62
BLCAchr514381191Missense_MutationNAS1170C0.37
BLCAchr514387819Missense_MutationNAE1285Q0.11
BLCAchr514398960Nonsense_MutationNAR1502*0.07
BLCAchr514358204Silentrs750259424Q691Q0.33
BLCAchr514336565SilentnovelL628L0.5
BLCAchr514482690Missense_MutationnovelE2192Q0.45
BLCAchr514297123Missense_MutationnovelE410Q0.2
BLCAchr514498630SilentnovelL2774L0.1
BLCAchr514482728Missense_MutationnovelK2204N0.28
BLCAchr514492812Splice_RegionnovelL2626L0.07
BLCAchr514487481Missense_Mutationrs776030839E2285K0.32
BLCAchr514502638Missense_MutationnovelE2798K0.27
BLCAchr514304516Missense_MutationNAS475L0.05
BLCAchr514496992Missense_MutationNAG2665E0.17
BLCAchr514398954Missense_MutationNAL1500V0.2
BLCAchr514498565Missense_MutationnovelD2753Y0.27
BLCAchr514290937SilentnovelR254R0.27
BLCAchr514387626Missense_MutationnovelN1253K0.63
BLCAchr514336545Missense_MutationnovelT622A0.31
BLCAchr514358345Splice_RegionnovelL738L0.39
BLCAchr514387487Missense_MutationNAC1207S0.21
BLCAchr514508017Missense_MutationnovelI2963M0.51
BLCAchr514507136Missense_Mutationrs781136104R2876H0.21
BLCAchr514406633Silentrs147339578I1640I0.15
BLCAchr514304578Missense_MutationnovelL496V0.04
BLCAchr514481588Missense_MutationnovelM2145I0.15
BLCAchr514485159Missense_MutationNAI2250V0.14
BLCAchr514389322Missense_MutationNAE1328K0.3
BLCAchr514364721Missense_MutationnovelE887K0.07
BLCAchr514398993Missense_MutationnovelE1513Q0.39
BLCAchr514293122Frame_Shift_InsnovelC391Efs*500.11
BLCAchr514358265Missense_Mutationrs199843575R712C0.37
BLCAchr514363859Frame_Shift_DelnovelL841Ffs*20.27
BLCAchr514496988Missense_MutationnovelE2664Q0.42
BLCAchr514492698Missense_Mutationrs368253813M2588I0.17
BLCAchr514508191Missense_MutationnovelQ3021H0.29
BRCAchr514462804Missense_MutationnovelS1849F0.1
BRCAchr514368722Silentrs10064745S963S0.31
BRCAchr514498145Missense_MutationnovelV2702L0.04
BRCAchr514481610Nonsense_MutationNAG2153*0.11
BRCAchr514498627Missense_MutationNAS2773R0.22
BRCAchr5145091483'UTRnovel0.18
BRCAchr514504483Silentrs760721624R2834R0.23
BRCAchr514399053Missense_MutationNAY1533H0.31
BRCAchr514507209In_Frame_DelnovelE2901del0.07
BRCAchr514316522Missense_MutationnovelD504Y0.08
BRCAchr514476934Missense_MutationnovelE2042K0.13
BRCAchr514363764SilentNAE808E0.25
BRCAchr514479973Missense_MutationnovelP2100A0.11
BRCAchr514507138Missense_Mutationrs748327260L2877F0.19
BRCAchr514358312SilentnovelV727V0.09
BRCAchr514287051SilentNAK176K0.33
BRCAchr514399067SilentNAL1537L0.17
BRCAchr514304492Missense_MutationnovelA467D0.09
BRCAchr514358253Missense_MutationNAD708H0.38
BRCAchr514290787SilentNAG204G0.23
BRCAchr514398961Missense_MutationNAR1502Q0.13
BRCAchr514482626Missense_MutationNAF2170L0.14
BRCAchr514498102Silentrs371720824F2687F0.11
BRCAchr514465681IntronNA0.16
BRCAchr514480008SilentNAL2111L0.28
BRCAchr514472651Missense_MutationNAV1991A0.21
BRCAchr514358213SilentNAL694L0.4
BRCAchr514358223Missense_MutationNAV698M0.42
BRCAchr514290818Missense_MutationNAE215K0.24
BRCAchr514507163Missense_MutationNAG2885E0.24
CESCchr514441240Intronnovel0.25
CESCchr514359480Missense_MutationNAI780M0.3
CESCchr514485187Missense_Mutationrs750947029R2259Q0.22
CESCchr514374288Silentrs145133665S1092S0.08
CESCchr514378093Missense_MutationnovelQ1138R0.45
CESCchr514488778Intronnovel0.53
CESCchr5145094123'UTRnovel0.16
CESCchr514291156Missense_MutationnovelQ327H0.25
CESCchr514316725SilentnovelF571F0.32
CESCchr514462807Missense_MutationNAS1850L0.34
CESCchr514507182Missense_MutationNAK2891N0.29
CESCchr5145086773'UTRnovel0.26
CESCchr514482625Missense_MutationnovelF2170C0.1
CESCchr514476894Missense_Mutationrs371806945D2028E0.34
CESCchr514290776Missense_MutationNAE201K0.29
CESCchr514336596Missense_MutationnovelE639K0.47
CESCchr514389312SilentnovelS1324S0.33
CESCchr514405867Missense_MutationnovelK1579R0.09
CESCchr514492714Missense_Mutationrs759385450A2594T0.24
CESCchr514488816Intronnovel0.44
CESCchr514358345Splice_RegionnovelL738L0.38
CESCchr514461279Frame_Shift_InsnovelT1824Gfs*660.43
CESCchr514368773Silentrs142713400Y980Y0.14
CESCchr514405860Missense_MutationnovelE1577Q0.22
COADchr514316703Missense_MutationnovelQ564R0.17
COADchr514330791Missense_MutationNAI582N0.48
COADchr514387792Nonsense_MutationNAR1276*0.45
COADchr514336645Missense_Mutationrs753710560R655Q0.21
COADchr514287035Missense_MutationNAN171T0.39
COADchr514336662Missense_MutationNAR661W0.4
COADchr514476940Missense_MutationNAL2044I0.31
COADchr514508206Silentrs200447498F3026F0.45
COADchr514358231SilentNAA700A0.27
COADchr514358222Silentrs778327240D697D0.52
COADchr514368837Missense_MutationnovelK1002E0.06
COADchr514399061Missense_MutationnovelS1535R0.14
COADchr514488020SilentnovelA2464A0.43
COADchr514387518Frame_Shift_DelNAK1219Nfs*430.11
COADchr514487672Frame_Shift_Delrs746654944V2351Cfs*620.35
COADchr514286914Missense_MutationNAR131C0.3
COADchr514465616Missense_MutationNAI1913M0.32
COADchr514374312SilentNAT1100T0.09
COADchr514387497SilentNAG1210G0.37
COADchr514508233Silentrs369006273P3035P0.17
COADchr514286914Missense_MutationNAR131C0.09
COADchr514358220Missense_MutationNAD697N0.19
COADchr514297191Silentrs141998293A432A0.38
COADchr514508092Silentrs55898643G2988G0.24
COADchr514316672Missense_MutationNAI554V0.34
COADchr514481586Missense_MutationnovelM2145V0.38
COADchr514487510SilentNAG2294G0.36
COADchr514394100SilentnovelQ1427Q0.07
COADchr514508346Missense_MutationNAR3073H0.37
COADchr514508003Missense_Mutationrs780863165A2959T0.16
COADchr514270832Frame_Shift_DelNAN57Tfs*40.32
COADchr514487672Frame_Shift_Delrs746654944V2351Cfs*620.29
COADchr514369468Missense_MutationnovelD1054A0.16
COADchr514487940Missense_MutationnovelR2438C0.17
COADchr5145086783'UTRnovel0.25
COADchr514316693Missense_Mutationrs761067835R561W0.14
COADchr514363820Missense_Mutationrs370634993R827H0.14
COADchr514488114Nonsense_MutationNAR2496*0.35
COADchr514487672Frame_Shift_Delrs746654944V2351Cfs*620.3
COADchr514358222Silentrs778327240D697D0.47
COADchr514363853Missense_MutationNAM838T0.42
COADchr514471330Missense_MutationNAR1926C0.06
COADchr514508023Silentrs546106927L2965L0.39
COADchr514504524Missense_MutationnovelQ2848R0.21
COADchr514374299Missense_MutationNAP1096Q0.13
COADchr514401012Missense_MutationNAF1555S0.09
COADchr514485236Missense_MutationnovelN2275K0.16
COADchr514387518Frame_Shift_DelNAK1219Nfs*430.2
COADchr514270856Missense_MutationnovelM63I0.24
COADchr514280323Splice_RegionNAG78G0.3
COADchr514479341SilentNAT2078T0.32
COADchr514389293Missense_MutationnovelY1318F0.12
COADchr514461022Missense_MutationNAS1736L0.24
COADchr514465543Splice_SiteNAX1890_splice0.19
COADchr514508002Silentrs572269818F2958F0.35
COADchr514369389Frame_Shift_DelNAE1028Rfs*290.41
COADchr514369465Missense_Mutationrs754511053T1053M0.32
COADchr514488201Missense_MutationNAR2525C0.27
DLBCchr514397119Missense_Mutationrs373502206R1463Q0.09
DLBCchr514359393Missense_MutationnovelN751K0.41
ESCAchr514368861Missense_MutationnovelV1010I0.13
ESCAchr514369505SilentnovelQ1066Q0.09
ESCAchr514390988Missense_MutationnovelD1406N0.1
ESCAchr514358309Silentrs762757315N726N0.29
ESCAchr514406634Missense_Mutationrs775980433A1641T0.42
ESCAchr514419837Silentrs540921917N1673N0.63
ESCAchr514489166Intronnovel0.74
GBMchr514389293Missense_MutationnovelY1318S0.06
GBMchr514387843Nonsense_MutationnovelK1293*0.19
GBMchr514364719Missense_MutationnovelH886P0.2
GBMchr514374312SilentNAT1100T0.34
GBMchr514502581Missense_Mutationrs745436046P2779S0.25
GBMchr514462866Missense_MutationNAP1870A0.55
GBMchr514399078Splice_Regionnovel0.07
GBMchr514286874Missense_MutationnovelE117D0.12
GBMchr514389337Missense_Mutationrs770762103I1333V0.19
GBMchr514336645Missense_Mutationrs753710560R655Q0.19
GBMchr514381156Silentrs199861793G1158G0.35
GBMchr514394112Missense_MutationnovelK1431N0.14
GBMchr514405891Missense_Mutationrs753950455R1587H0.21
GBMchr514366938Missense_MutationnovelQ945K0.68
GBMchr514405862SilentnovelE1577E0.18
GBMchr514498565Missense_MutationnovelD2753Y0.53
GBMchr514358310Missense_Mutationrs748582661V727M0.26
GBMchr514406603Silentrs780909267D1630D0.3
GBMchr514389291Splice_RegionnovelT1317T0.04
GBMchr514471345Missense_MutationnovelL1931F0.1
GBMchr514508226Missense_MutationnovelE3033G0.08
GBMchr514498560Missense_Mutationrs746758470T2751M0.47
GBMchr514471323SilentnovelL1923L0.08
GBMchr514496943Missense_MutationNAG2649C0.04
GBMchr514492630Nonsense_MutationnovelK2566*0.06
GBMchr514471445Missense_MutationnovelS1964C0.04
GBMchr514363821SilentnovelR827R0.08
GBMchr514498632Missense_MutationnovelR2775T0.07
HNSCchr514381223Missense_Mutationrs773995062E1181Q0.31
HNSCchr514504559Missense_MutationnovelE2860Q0.03
HNSCchr514291065Nonsense_MutationnovelS297*0.18
HNSCchr514290723Missense_MutationnovelM183T0.13
HNSCchr514369450Missense_MutationnovelG1048D0.22
HNSCchr514487504SilentnovelG2292G0.29
HNSCchr514508346Missense_MutationNAR3073H0.22
HNSCchr514405939Missense_MutationnovelE1603G0.29
HNSCchr514419882SilentnovelR1688R0.53
HNSCchr514368854Silentrs756381004L1007L0.12
HNSCchr514291201SilentnovelL342L0.24
HNSCchr514399183Intronnovel0.5
HNSCchr514304513Missense_Mutationrs766016794P474L0.21
HNSCchr514479969Missense_MutationnovelI2098M0.53
HNSCchr514476963Missense_MutationnovelH2051Q0.13
HNSCchr514419929Missense_MutationnovelS1704C0.56
HNSCchr514504589Missense_MutationnovelE2870Q0.05
HNSCchr514492623Silentrs764670811T2563T0.11
HNSCchr514492639Missense_MutationnovelE2569K0.1
HNSCchr514488137SilentnovelP2503P0.21
HNSCchr514368871Missense_MutationnovelS1013F0.37
KICHchr5145085723'UTRnovel0.53
KIRCchr514363907Missense_MutationNAV856G0.05
KIRCchr514497010Missense_MutationNAS2671Y0.23
KIRCchr514485115Missense_MutationNAK2235I0.29
KIRCchr514462916Frame_Shift_InsnovelD1887Lfs*100.26
KIRPchr514497006Missense_MutationNAV2670L0.25
KIRPchr514401003Missense_MutationnovelP1552H0.45
KIRPchr514387563Frame_Shift_DelnovelL1233Cfs*290.39
KIRPchr514496907Missense_MutationNAR2637S0.44
KIRPchr514471451Missense_MutationNAS1966F0.72
LAMLchr514286915Missense_MutationNAR131H0.42
LGGchr514406644Missense_Mutationrs55687522T1644M0.31
LGGchr514399060Missense_MutationnovelS1535N0.08
LGGchr514462811SilentnovelG1851G0.07
LGGchr514471382Missense_Mutationrs745976496N1943S0.24
LIHCchr514270831Missense_MutationNAR55Q0.61
LIHCchr514280362SilentnovelP91P0.08
LIHCchr514368871Missense_MutationnovelS1013C0.38
LIHCchr514487517Missense_MutationNAG2297S0.13
LIHCchr514394102Missense_MutationNAR1428Q0.39
LIHCchr514304528Missense_MutationnovelD479G0.17
LUADchr514507217Missense_MutationnovelV2903D0.11
LUADchr514498125Missense_MutationnovelT2695K0.26
LUADchr514481275SilentnovelS2126S0.17
LUADchr514280410Silentrs764200107L107L0.07
LUADchr514291228Missense_MutationNAK351N0.25
LUADchr514419850Nonsense_Mutationrs749963113R1678*0.24
LUADchr514291125Missense_MutationnovelR317L0.26
LUADchr514507988Missense_MutationnovelG2954W0.09
LUADchr514482596SilentnovelA2160A0.37
LUADchr514369380Missense_MutationNAS1025C0.08
LUADchr514291204SilentNAR343R0.27
LUADchr514502590Missense_MutationnovelD2782N0.34
LUADchr514419926Missense_MutationnovelR1703L0.06
LUADchr514488913Intronnovel0.44
LUADchr514485147Missense_MutationnovelV2246L0.56
LUADchr514507197SilentNAL2896L0.31
LUADchr514280361Missense_Mutationrs767063550P91L0.41
LUADchr514474089Missense_MutationNAW2025C0.11
LUADchr514287055Missense_MutationNAE178K0.09
LUADchr514398903Missense_MutationnovelQ1483E0.05
LUADchr514462841Missense_MutationnovelE1861D0.07
LUADchr514472638Missense_MutationnovelD1987Y0.62
LUADchr514330900Missense_MutationnovelQ618H0.2
LUADchr514330901Splice_SitenovelX618_splice0.19
LUADchr514280425SilentnovelA112A0.04
LUADchr5145085233'UTRnovel0.09
LUADchr514390274Missense_MutationnovelD1368Y0.43
LUADchr514330834SilentnovelV596V0.21
LUADchr514330835Missense_MutationnovelG597W0.2
LUADchr514369418SilentnovelE1037E0.06
LUADchr514488913Intronnovel0.44
LUADchr514358251Missense_MutationNAQ707L0.09
LUADchr514479294Nonsense_MutationNAQ2063*0.06
LUADchr514474038Missense_MutationnovelM2008I0.13
LUADchr514508244Missense_MutationnovelP3039L0.31
LUADchr514462809Missense_MutationNAG1851W0.5
LUADchr514358210Missense_MutationNAE693D0.17
LUADchr514406612SilentnovelS1633S0.2
LUADchr514482581Splice_SitenovelX2156_splice0.29
LUADchr514507963SilentnovelT2945T0.12
LUADchr514291140Missense_MutationnovelR322L0.17
LUADchr514291141SilentnovelR322R0.18
LUADchr514419785Missense_MutationnovelG1656V0.18
LUADchr514359398Missense_MutationNAS753F0.49
LUADchr514286890Missense_MutationnovelG123C0.11
LUADchr514481266SilentNAL2123L0.07
LUADchr514378011Splice_SiteNAX1111_splice0.3
LUSCchr514291008Missense_MutationnovelE278G0.19
LUSCchr514330897SilentNAA617A0.3
LUSCchr514290995Missense_MutationnovelD274Y0.18
LUSCchr514363878SilentnovelI846I0.09
LUSCchr514270887Missense_MutationnovelA74T0.13
LUSCchr514508317SilentnovelT3063T0.43
LUSCchr514291121Missense_MutationnovelD316H0.08
LUSCchr514387607Missense_MutationnovelG1247E0.38
LUSCchr514507193Missense_MutationNAH2895L0.39
LUSCchr514502633Missense_MutationnovelY2796C0.79
LUSCchr514471340Missense_MutationnovelS1929L0.34
LUSCchr514476963Splice_Regionrs746238974H2051H0.23
LUSCchr514336611Missense_MutationNAE644Q0.09
LUSCchr514304549Missense_MutationnovelH486R0.1
LUSCchr514399093Intronrs7793901790.31
LUSCchr514297174Missense_Mutationrs747731735E427Q0.24
LUSCchr514330836Missense_MutationnovelG597A0.18
LUSCchr514368812Silentrs570447608A993A0.25
LUSCchr514485161Missense_MutationNAI2250M0.44
LUSCchr514286874SilentNAE117E0.19
LUSCchr514498628SilentNAL2774L0.13
LUSCchr514488091Missense_Mutationrs748080841S2488C0.11
LUSCchr514462763SilentnovelR1835R0.27
LUSCchr514465568SilentNAR1897R0.06
LUSCchr514390231Splice_RegionnovelN1353N0.47
LUSCchr514394048Missense_MutationnovelQ1410L0.15
LUSCchr514387509SilentnovelA1214A0.04
LUSCchr514471331Missense_Mutationrs375877998R1926H0.06
LUSCchr514330850Missense_MutationNAR602G0.15
LUSCchr514406667Missense_MutationnovelD1652Y0.1
LUSCchr514364761Missense_MutationnovelR900L0.28
LUSCchr514291011Missense_MutationnovelG279V0.45
LUSCchr514374245Missense_MutationNAR1078Q0.25
LUSCchr514508305SilentNAG3059G0.19
LUSCchr514405909Missense_MutationnovelR1593Q0.29
LUSCchr514465555Missense_MutationnovelR1893L0.32
LUSCchr514488905Intronnovel0.5
MESOchr514290856SilentnovelA227A0.17
MESOchr514507133Missense_MutationnovelG2875A0.13
OVchr514485074SilentnovelS2221S0.24
OVchr514369372Splice_SiteNAX1023_splice0.45
OVchr514369505Missense_MutationNAQ1066H0.2
OVchr514358247Missense_MutationNAV706L0.18
OVchr514406639SilentNAS1642S0.47
OVchr514399109Intronnovel0.09
OVchr514399111Intronnovel0.07
OVchr514297095SilentNAR400R0.19
OVchr514406636SilentnovelA1641A0.22
OVchr514465713Intronnovel0.04
OVchr514465714Intronnovel0.04
OVchr514419831Missense_MutationNAN1671K0.12
OVchr514489052Intronnovel0.42
OVchr514462783Missense_MutationnovelG1842D0.15
OVchr514498245Splice_SitenovelX2736_splice0.24
OVchr514363882Missense_MutationnovelQ848K0.06
OVchr514507176Missense_MutationnovelE2889D0.35
OVchr514364659Missense_MutationnovelL866R0.12
OVchr514489086Intronnovel0.18
PAADchr514369382Silentrs747758995S1025S0.15
PAADchr514387792Nonsense_MutationNAR1276*0.2
PAADchr514406667Missense_Mutationrs765405800D1652N0.23
PAADchr514482698Silentrs139448086I2194I0.16
PAADchr514485186Missense_MutationnovelR2259W0.16
PAADchr514485239Missense_MutationnovelF2276L0.2
PCPGchr514390952Missense_MutationnovelT1394S0.22
PCPGchr514286966Missense_MutationnovelS148C0.32
PRADchr514359514Missense_MutationnovelE792K0.16
PRADchr514504540Silentrs754497690V2853V0.18
PRADchr514366881Missense_MutationNAG926R0.2
PRADchr514504394Missense_MutationNAG2805S0.07
PRADchr514363750Missense_MutationNAS804A0.06
PRADchr514507970Missense_MutationNAY2948H0.13
PRADchr514482698Silentrs139448086I2194I0.4
PRADchr514492716Silentrs762432411A2594A0.48
READchr514363788Silentrs758409767F816F0.26
READchr514291015SilentNAQ280Q0.34
READchr514336662Missense_MutationNAR661W0.33
READchr5145084373'UTRrs7617425650.46
READchr514462838Silentrs146544278G1860G0.77
READchr514419819SilentNAF1667F0.35
READchr514290946SilentnovelI257I0.63
READchr514508002Silentrs572269818F2958F0.4
SARCchr514481608Missense_MutationnovelQ2152L0.22
SARCchr514368723Missense_Mutationrs139892017A964T0.3
SARCchr514359441SilentnovelA767A0.51
SARCchr514507207SilentnovelL2900L0.33
SKCMchr514488182SilentNAA2518A0.64
SKCMchr514405930Missense_MutationnovelA1600V0.26
SKCMchr514488982Intronrs7792670830.23
SKCMchr514462810Missense_MutationNAG1851E0.52
SKCMchr514399105Intronnovel0.21
SKCMchr514462837Missense_MutationNAG1860D0.23
SKCMchr514476891Splice_Regionnovel0.42
SKCMchr514366901Silentrs141984882A932A0.15
SKCMchr514368849Missense_MutationNAR1006C0.27
SKCMchr514465587Missense_MutationNAP1904S0.1
SKCMchr514492596SilentNAS2554S0.28
SKCMchr514508366Nonsense_MutationNAR3080*0.24
SKCMchr514482660Missense_Mutationrs373321656R2182C0.16
SKCMchr514488098Silentrs748883903P2490P0.28
SKCMchr514419849Silentrs374579202I1677I0.51
SKCMchr514488173SilentNAR2515R0.25
SKCMchr514280404SilentnovelR105R0.29
SKCMchr514492712Missense_MutationnovelR2593P0.19
SKCMchr514280415Missense_MutationNAS109F0.29
SKCMchr514487473Missense_Mutationrs746676823S2282L0.56
SKCMchr514394102Missense_MutationNAR1428Q0.2
SKCMchr514482745Missense_Mutationrs750016484P2210L0.09
SKCMchr514336685SilentNAI668I0.12
SKCMchr514497857Missense_MutationNAP2677L0.06
SKCMchr514405848Missense_MutationNAA1573T0.44
SKCMchr514363882Nonsense_MutationnovelQ848*0.21
SKCMchr514369373Splice_SiteNAX1023_splice0.21
SKCMchr514363755Nonsense_MutationNAW805*0.24
SKCMchr514507948SilentNAA2940A0.13
SKCMchr514507219Missense_Mutationrs748154890R2904W0.4
SKCMchr514280406Missense_MutationNAR106K0.2
SKCMchr514369461Missense_MutationNAE1052K0.1
SKCMchr514387564SilentNAL1233L0.09
SKCMchr514419944Missense_MutationnovelG1709D0.51
SKCMchr514291084SilentnovelD303D0.49
SKCMchr514290992Missense_Mutationrs772378892E273K0.43
SKCMchr514287055Nonsense_MutationnovelE178*0.35
SKCMchr514304534Missense_MutationNAE481G0.25
SKCMchr514508023Silentrs546106927L2965L0.95
SKCMchr514471426Missense_MutationNAE1958K0.44
SKCMchr5145084643'UTRnovel0.28
SKCMchr514488983Intronnovel0.36
SKCMchr514387792SilentNAR1276R0.49
SKCMchr514420015Missense_Mutationrs368342075H1733Y0.28
SKCMchr514498588Silentrs776118053I2760I0.44
SKCMchr514304553SilentNAH487H0.16
SKCMchr514474011Missense_MutationNAM1999I0.07
SKCMchr514482590Silentrs754779359I2158I0.32
SKCMchr514476931Missense_MutationnovelP2041S0.49
SKCMchr514492695Silentrs776305258N2587N0.33
SKCMchr514270893Missense_MutationNAL76F0.36
SKCMchr514290942Missense_MutationnovelM256K0.3
SKCMchr514462902Nonsense_MutationnovelQ1882*0.6
SKCMchr514364697Nonsense_MutationNAQ879*0.37
SKCMchr514465662Intronnovel0.53
STADchr514476895Frame_Shift_Delrs752676391L2031*0.38
STADchr514492717Missense_Mutationrs369051747A2595T0.22
STADchr514498145Missense_Mutationrs200412299V2702I0.42
STADchr514291100Missense_MutationNAP309S0.45
STADchr514364786SilentNAQ908Q0.43
STADchr514487672Frame_Shift_Delrs746654944V2351Cfs*620.26
STADchr514405943SilentNAP1604P0.57
STADchr514368774Missense_Mutationrs774072211D981N0.05
STADchr514462836Missense_MutationNAG1860C0.33
STADchr514419850Nonsense_Mutationrs749963113R1678*0.25
STADchr514363746Silentrs141315662L802L0.18
STADchr514378045Missense_MutationNAR1122M0.21
STADchr514476895Frame_Shift_Delrs752676391L2031*0.52
STADchr514487672Frame_Shift_Delrs746654944V2351Cfs*620.47
STADchr514291056Missense_MutationNAK294I0.3
STADchr514297233Missense_MutationNAM446I0.38
STADchr514488201Missense_MutationNAR2525C0.41
STADchr514462772Silentrs764203841G1838G0.26
STADchr514280366Missense_Mutationrs767723793R93C0.21
STADchr514366880Silentrs370683728N925N0.46
STADchr514462820SilentnovelS1854S0.1
STADchr514471385Missense_MutationnovelP1944H0.12
STADchr514485195Missense_MutationnovelW2262R0.35
STADchr514476895Frame_Shift_Delrs752676391L2031*0.42
STADchr514482585Frame_Shift_DelNAI2158Sfs*630.32
STADchr514280416SilentnovelS109S0.18
STADchr514381199Nonsense_MutationnovelQ1173*0.16
STADchr514488047Frame_Shift_Delrs774597492S2476Afs*510.28
STADchr514363784Missense_MutationNAD815G0.16
STADchr514405912Missense_MutationnovelT1594M0.26
STADchr514462868Silentrs138509776P1870P0.26
STADchr514476895Frame_Shift_Delrs752676391L2031*0.42
STADchr514507927Missense_MutationnovelK2933N0.38
STADchr514387749SilentNAL1261L0.37
STADchr514485136Missense_Mutationrs55916212T2242M0.25
STADchr514359436Missense_MutationnovelE766K0.1
STADchr514507135Missense_Mutationrs755026998R2876C0.34
STADchr514358317Missense_MutationnovelK729T0.11
STADchr514291124Missense_Mutationrs368654118R317W0.16
STADchr514387518Frame_Shift_DelNAK1219Nfs*430.48
STADchr514461290SilentnovelP1825P0.33
STADchr514488046Frame_Shift_InsnovelS2476Pfs*520.36
STADchr514504483SilentNAR2834R0.33
STADchr514461281SilentNAA1822A0.3
STADchr514498521Missense_MutationNAD2738G0.27
STADchr514508346Missense_MutationNAR3073H0.33
STADchr514359447Silentrs200525310S769S0.08
STADchr514476895Frame_Shift_Delrs752676391L2031*0.45
STADchr514462857Missense_Mutationrs774835487V1867M0.4
STADchr514290915Missense_MutationNAP247L0.36
STADchr514462844Frame_Shift_DelnovelA1864Pfs*320.24
STADchr514387560Missense_MutationNAF1231L0.23
STADchr514476895Frame_Shift_Delrs752676391L2031*0.27
STADchr514369445Missense_MutationNAK1046N0.11
STADchr514488176SilentnovelH2516H0.36
STADchr514487672Frame_Shift_Delrs746654944V2351Cfs*620.38
STADchr514481572Missense_MutationNAR2140M0.18
STADchr514476895Frame_Shift_Delrs752676391L2031*0.44
STADchr514487672Frame_Shift_Delrs746654944V2351Cfs*620.27
STADchr514504540Silentrs754497690V2853V0.1
STADchr514504540Silentrs754497690V2853V0.39
STADchr514485130Missense_MutationNAS2240L0.29
STADchr514389316Missense_MutationNAV1326M0.41
STADchr514498599Missense_MutationNAD2764A0.18
STADchr514366914Missense_Mutationrs751285174A937T0.21
STADchr514400982Missense_MutationNAT1545I0.2
STADchr514316645Missense_MutationnovelL545M0.06
THCAchr514492624Missense_MutationNAA2564T0.3
THCAchr514293067Missense_MutationNAI370T0.3
THYMchr514389328Missense_MutationnovelP1330T0.3
UCECchr514476895Frame_Shift_Delrs752676391L2031*0.41
UCECchr514485128SilentnovelT2239T0.08
UCECchr514498608Missense_Mutationrs146227809S2767L0.32
UCECchr514401052Missense_MutationNAK1568N0.37
UCECchr514482698Silentrs139448086I2194I0.28
UCECchr5145084373'UTRrs7617425650.27
UCECchr514359523Missense_MutationNAA795T0.26
UCECchr514389291Splice_Regionrs752164149T1317T0.29
UCECchr514398960Nonsense_MutationNAR1502*0.35
UCECchr514419910Missense_MutationnovelV1698L0.4
UCECchr514286915Missense_MutationNAR131H0.34
UCECchr514336658Silentrs552869777F659F0.33
UCECchr514368876Missense_Mutationrs745774257A1015T0.24
UCECchr514398950Missense_MutationnovelK1498N0.14
UCECchr514462851Missense_MutationnovelD1865N0.33
UCECchr514497010Missense_MutationNAS2671Y0.21
UCECchr514504481Missense_Mutationrs56400458R2834C0.23
UCECchr5145088083'UTRnovel0.58
UCECchr514290809Nonsense_MutationNAE212*0.42
UCECchr514290992Missense_Mutationrs772378892E273K0.19
UCECchr514389364Nonsense_MutationNAG1342*0.29
UCECchr514405881Missense_MutationNAK1584E0.44
UCECchr514465605Missense_Mutationrs773375329V1910I0.1
UCECchr514471388Missense_Mutationrs771840207S1945L0.33
UCECchr5145085323'UTRnovel0.4
UCECchr514504408Silentrs779722932V2809V0.38
UCECchr5145085843'UTRnovel0.56
UCECchr5145091563'UTRnovel0.13
UCECchr514496970Missense_Mutationrs552382011G2658S0.42
UCECchr514336666Missense_MutationNAR662H0.21
UCECchr514287017Nonsense_MutationnovelW165*0.41
UCECchr514316710Silentrs747007284L566L0.5
UCECchr514465682Intronnovel0.41
UCECchr514465604Silentrs200594729L1909L0.21
UCECchr5145092813'UTRnovel0.4
UCECchr514286872Missense_Mutationrs769526836E117K0.13
UCECchr514397148Missense_MutationnovelL1473M0.5
UCECchr514398897Missense_MutationnovelE1481K0.33
UCECchr514280367Missense_Mutationrs376866089R93H0.48
UCECchr514485236Frame_Shift_DelNAL2277*0.44
UCECchr514497010Missense_MutationNAS2671Y0.38
UCECchr514293121Missense_MutationNAA388G0.44
UCECchr514508098SilentnovelS2990S0.08
UCECchr514508342Missense_MutationnovelR3072W0.12
UCECchr514364691Missense_MutationNAR877W0.2
UCECchr514387606Missense_MutationNAG1247R0.24
UCECchr514397053Missense_Mutationrs763926725T1441M0.23
UCECchr514405942Missense_MutationNAP1604L0.29
UCECchr514508002Silentrs572269818F2958F0.22
UCECchr514406644Missense_Mutationrs55687522T1644M0.55
UCECchr514368737SilentnovelQ968Q0.29
UCECchr514482590Silentrs754779359I2158I0.3
UCECchr514297196Missense_MutationNAA434V0.25
UCECchr514316611SilentnovelA533A0.29
UCECchr514336662Missense_MutationNAR661W0.1
UCECchr514359505Missense_MutationnovelR789C0.17
UCECchr514485130Missense_MutationNAS2240L0.05
UCECchr514330851Missense_MutationnovelR602Q0.38
UCECchr514508092Silentrs55898643G2988G0.42
UCECchr514291081Silentrs764374315A302A0.34
UCECchr514479961Missense_MutationnovelL2096M0.17
UCECchr514496966SilentnovelE2656E0.2
UCECchr514359404Missense_MutationnovelN755S0.46
UCECchr514368789Missense_MutationnovelR986W0.11
UCECchr514297095Silentrs746674667R400R0.49
UCECchr514398976Missense_MutationNAR1507Q0.22
UCECchr514397109Missense_MutationnovelV1460M0.36
UCECchr514336564Missense_MutationnovelL628P0.06
UCECchr514297103Missense_MutationnovelS403L0.44
UCECchr514508206Silentrs200447498F3026F0.19
UCECchr514290809Nonsense_MutationNAE212*0.35
UCECchr514441136Intronnovel0.09
UCECchr514394101Missense_MutationnovelR1428G0.06
UCECchr514297159Missense_MutationnovelI422V0.34
UCECchr514304509Missense_MutationnovelL473I0.28
UCECchr514359417SilentnovelT759T0.23
UCECchr514465788Intronnovel0.26
UCECchr5145088083'UTRnovel0.18
UCECchr514471397Frame_Shift_DelnovelL1949Ffs*190.39
UCECchr514476895Frame_Shift_Delrs752676391L2031*0.29
UCECchr514504541Missense_Mutationrs778314493G2854S0.11
UCECchr514359416Missense_Mutationrs201514384T759M0.21
UCECchr514394052SilentnovelR1411R0.35
UCECchr514399000Missense_MutationnovelS1515Y0.37
UCECchr514462853Silentrs539850349D1865D0.45
UCECchr514498590Missense_MutationnovelA2761V0.41
UCECchr514508077Silentrs199903389Y2983Y0.33
UCECchr514508253Missense_Mutationrs759482240A3042V0.53
UCECchr514290749Missense_MutationNAV192I0.36
UCECchr514363788Silentrs758409767F816F0.36
UCECchr514507949Missense_Mutationrs767953889V2941F0.17
UCECchr514504514Nonsense_MutationNAQ2845*0.42
UCECchr514508023Silentrs546106927L2965L0.48
UCECchr514290972Missense_MutationnovelK266M0.33
UCECchr514358266Missense_Mutationrs370241914R712H0.42
UCECchr514364749Missense_Mutationrs756805966A896V0.44
UCECchr514482710Silentrs756634289S2198S0.31
UCECchr514498145Missense_Mutationrs200412299V2702I0.39
UCECchr5145091993'UTRnovel0.44
UCECchr514465552Missense_MutationnovelS1892Y0.55
UCECchr514476955Missense_MutationnovelV2049F0.13
UCECchr514485235Missense_MutationnovelN2275T0.24
UCECchr514369433Silentrs754148709G1042G0.46
UCECchr514498125Missense_MutationNAT2695M0.09
UCECchr514508007Missense_MutationNAA2960V0.37
UCECchr514387518Frame_Shift_DelNAK1219Nfs*430.36
UCECchr514293076Missense_MutationnovelS373N0.37
UCECchr514291080Missense_Mutationrs761019734A302V0.17
UCECchr514482675Missense_MutationNAR2187C0.13
UCECchr514368797Silentrs144236504C988C0.07
UCECchr514462844Frame_Shift_DelnovelA1864Pfs*320.48
UCECchr514405895Missense_MutationnovelE1588D0.53
UCECchr514471388Missense_Mutationrs771840207S1945L0.38
UCECchr514497848Missense_MutationnovelL2674R0.4
UCECchr514508017SilentnovelI2963I0.24
UCECchr514291228Missense_MutationNAK351N0.33
UCECchr514364716Missense_MutationnovelL885P0.32
UCECchr514482771Missense_MutationnovelK2219E0.29
UCECchr514488893Intronnovel0.38
UCECchr514498212Missense_MutationnovelN2724S0.34
UCECchr514508028Missense_MutationnovelN2967S0.12
UCECchr514366901Silentrs141984882A932A0.04
UCECchr514462853Silentrs539850349D1865D0.13
UCECchr514290849Missense_MutationnovelS225N0.21
UCECchr514291060Missense_MutationnovelK295N0.14
UCECchr514399069Missense_MutationnovelF1538C0.24
UCECchr514465581Missense_MutationnovelE1902K0.19
UCECchr514316566Silentrs767860634P518P0.39
UCECchr514419850Nonsense_Mutationrs749963113R1678*0.35
UCECchr5145092283'UTRnovel0.38
UCECchr514465604Silentrs200594729L1909L0.34
UCECchr514394130Splice_RegionnovelK1437K0.4
UCECchr514485130Missense_MutationNAS2240L0.4
UCECchr514488888Intronnovel0.4
UCECchr514492665Silentrs146231483V2577V0.3
UCECchr514508002Silentrs572269818F2958F0.38
UCECchr514508366Nonsense_MutationNAR3080*0.3
UCECchr514462839Missense_MutationnovelE1861K0.37
UCECchr514401055SilentnovelI1569I0.44
UCECchr514508072Missense_MutationnovelT2982A0.24
UCECchr514290749Missense_MutationNAV192I0.39
UCECchr514485130Missense_MutationNAS2240L0.08
UCECchr514488903Intronrs7598084800.43
UCECchr514508206Silentrs200447498F3026F0.37
UCECchr514441321Intronnovel0.55
UCECchr514406575Missense_Mutationrs751338228D1621G0.58
UCECchr514290806Missense_Mutationrs538529734E211K0.12
UCECchr514387792Nonsense_MutationNAR1276*0.27
UCECchr514471402Missense_MutationNAL1950I0.32
UCECchr514479327Missense_MutationNAE2074K0.23
UCECchr5145084473'UTRnovel0.17
UCECchr514496890Missense_MutationnovelS2631Y0.13
UCECchr514359374Missense_MutationnovelS745N0.5
UCECchr514387517Frame_Shift_InsNAC1220Mfs*70.54
UCECchr514387517Frame_Shift_InsNAC1220Mfs*70.27
UCECchr5145088163'UTRnovel0.77
UCECchr514489147Intronnovel0.2
UCECchr514508206Silentrs200447498F3026F0.33
UCECchr5145086783'UTRnovel0.25
UCECchr514498630SilentNAL2774L0.37
UCECchr514489166Intronnovel0.52
UCECchr514406604Missense_MutationNAG1631S0.42
UCECchr514359532Splice_SiteNAX797_splice0.42
UCECchr514479931Missense_Mutationrs781722470R2086C0.13
UCECchr514359367Missense_MutationnovelI743V0.33
UCECchr514400987Missense_MutationnovelH1547Y0.42
UCECchr514479321Missense_MutationnovelV2072I0.35
UCECchr514336659Missense_MutationnovelV660I0.41
UCECchr514507939SilentnovelF2937F0.39
UCECchr514290806Missense_Mutationrs538529734E211K0.37
UCECchr514476895Frame_Shift_Delrs752676391L2031*0.41
UCECchr514387777Missense_MutationNAS1271A0.2
UCECchr514462838Silentrs146544278G1860G0.18
UCECchr514363788Silentrs758409767F816F0.27
UCECchr514482698Silentrs139448086I2194I0.29
UCECchr514398960Nonsense_MutationNAR1502*0.31
UCECchr514508002Silentrs572269818F2958F0.33
UCECchr5145092823'UTRnovel0.43
UCECchr514286988SilentnovelV155V0.28
UCECchr514286989Missense_MutationnovelA156T0.47
UCECchr514387631Missense_Mutationrs201215276S1255L0.51
UCECchr514390246Missense_MutationnovelE1358D0.18
UCECchr514398960Nonsense_MutationNAR1502*0.24
UCECchr514419888SilentnovelH1690H0.27
UCECchr514462817Missense_MutationnovelQ1853H0.25
UCECchr514465689Intronnovel0.13
UCECchr514471415Missense_MutationnovelS1954L0.34
UCECchr514482590Silentrs754779359I2158I0.65
UCECchr514492569Splice_RegionnovelS2545S0.25
UCECchr514498160Nonsense_Mutationrs747166529R2707*0.33
UCECchr5145085953'UTRnovel0.68
UCECchr514465788Intronnovel0.07
UCECchr514316555Missense_MutationnovelP515S0.43
UCECchr514389386Missense_MutationnovelE1349G0.31
UCECchr514336666Missense_MutationNAR662H0.09
UCECchr514316599SilentnovelN529N0.31
UCECchr514286892SilentnovelG123G0.09
UCECchr514366862Splice_RegionNAV919V0.17
UCECchr514359506Missense_MutationNAR789H0.28
UCECchr514358246Silentrs747272635A705A0.43
UCECchr514488890Intronnovel0.36
UCECchr514368725SilentnovelA964A0.56
UCECchr514387553Missense_MutationnovelR1229I0.39
UCECchr514390966SilentnovelL1398L0.28
UCECchr514398975Missense_MutationnovelR1507W0.23
UCECchr514419851Missense_MutationnovelR1678Q0.37
UCECchr514479309Missense_MutationnovelS2068P0.37
UCECchr514492797Silentrs754877810N2621N0.29
UCECchr514489166Intronnovel0.71
UCSchr514487495Missense_MutationnovelN2289K0.1
UCSchr5145084373'UTRrs7617425650.36
UVMchr514508240Missense_MutationnovelR3038C0.13

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
KIRPDEL0.02430.09673
SKCMDEL0.15260.011094
TGCTDEL0.57330.098913
THCADEL0.0040.23456

Survival Analysis
CancerP-value Q-value
THYM0.04

Kaplan-Meier Survival Analysis

SARC0.006

Kaplan-Meier Survival Analysis

MESO0.00057

Kaplan-Meier Survival Analysis

ACC0.027

Kaplan-Meier Survival Analysis

SKCM0.0037

Kaplan-Meier Survival Analysis

ESCA0.0069

Kaplan-Meier Survival Analysis

KIRP0.0062

Kaplan-Meier Survival Analysis

CESC0.0069

Kaplan-Meier Survival Analysis

UCEC0.00017

Kaplan-Meier Survival Analysis

LIHC0.0011

Kaplan-Meier Survival Analysis

LGG0.00026

Kaplan-Meier Survival Analysis

THCA0.0053

Kaplan-Meier Survival Analysis

UVM0.01

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000038382 (Gene tree)
Gene ID
7204
Gene Symbol
TRIO
Alias
ARHGEF23
Full Name
trio Rho guanine nucleotide exchange factor
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
388,427 bases
Position
chr5:14,143,702-14,532,128
Accession
12303
RBP type
non-canonical RBP
Summary
This gene encodes a large protein that functions as a GDP to GTP exchange factor. This protein promotes the reorganization of the actin cytoskeleton, thereby playing a role in cell migration and growth. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression