EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact
TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
27569444Gene expression profile analysis of dbpA knockdown in colorectal cancer cells.Cell Biol Int2016 DecLiu Rdoi: 10.1002/cbin.10670
27430286RNAi-mediated downregulation of DNA binding proteinA inhibits tumorigenesis in colorectal cancer.Int J Mol Med2016 SepLiu RTdoi: 10.3892/ijmm.2016.2662
19749785Upregulation of human DNA binding protein A (dbpA) in gastric cancer cells.Acta Pharmacol Sin2009 OctWang GRdoi: 10.1038/aps.2009.137

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1210704105Missense_MutationNAA275V0.69
BLCAchr1210713267Missense_MutationnovelD173Y0.39
BLCAchr1210701986Missense_MutationnovelN343D0.3
BLCAchr1210701994Missense_Mutationrs184471157R340H0.37
BLCAchr12107012593'UTRnovel0.12
BRCAchr1210702085Missense_MutationnovelD310H0.06
BRCAchr1210710024Nonsense_MutationnovelQ222*0.1
CESCchr12106993893'UTRnovel0.32
CESCchr1210710002Missense_MutationnovelR229H0.25
CESCchr1210702033Missense_Mutationrs140201332R327L0.32
CESCchr12106992273'UTRnovel0.05
COADchr1210704066Missense_Mutationrs745797213R288H0.04
COADchr1210710104Missense_Mutationrs749620675E195G0.52
ESCAchr12106993003'UTRnovel0.26
GBMchr1210702114Missense_Mutationrs145744944R300Q0.45
GBMchr1210702022Missense_MutationNAR331C0.5
KIRCchr1210713272Missense_Mutationrs371143914A171V0.39
KIRCchr1210701963Missense_MutationNAK350N0.12
LIHCchr1210713273Missense_Mutationrs747930990A171T0.46
LUADchr1210713308Missense_MutationNAG159D0.4
LUADchr1210704059Silentrs777444749R290R0.24
LUADchr1210719119Missense_MutationNAK96R0.25
LUADchr1210718108Missense_MutationNAE114K0.32
LUSCchr1210715738Missense_MutationNAG136R0.56
LUSCchr1210722868Missense_MutationNAA82P0.35
LUSCchr1210702009Missense_MutationNAY335F0.22
LUSCchr1210710003Missense_MutationNAR229C0.38
LUSCchr1210715729Missense_MutationnovelE139K0.35
LUSCchr1210701960Missense_MutationnovelE351D0.31
OVchr1210713218Missense_MutationNAP189H0.34
OVchr1210713288Missense_MutationnovelE166K0.09
OVchr1210702051In_Frame_DelnovelQ315_Q322del0.07
READchr1210709956SilentNAQ244Q0.25
READchr1210702066Missense_MutationnovelA316G0.08
SKCMchr1210704115Missense_MutationnovelP272S0.56
SKCMchr1210709967Missense_MutationnovelH241Y0.32
SKCMchr1210704056SilentNAY291Y0.13
SKCMchr1210704087Missense_MutationNAV281A0.2
SKCMchr1210713279Missense_Mutationrs760752611R169C0.17
SKCMchr1210713264Missense_Mutationrs748937054R174W0.3
SKCMchr1210710028SilentNAR220R0.29
STADchr1210715736SilentnovelG136G0.29
STADchr1210713279Missense_Mutationrs760752611R169C0.24
STADchr1210704066Missense_Mutationrs745797213R288H0.33
STADchr1210702024Missense_Mutationrs144824557R330Q0.08
STADchr1210710085Silentrs750604266S201S0.42
STADchr1210715710Missense_MutationnovelV145A0.37
STADchr1210702120Missense_Mutationrs201062345R298H0.16
STADchr12107012643'UTRnovel0.43
STADchr1210709991Missense_Mutationrs753555662R233W0.48
STADchr1210702027Missense_MutationNAY329C0.22
STADchr1210710014Missense_Mutationrs146058214R225H0.12
UCECchr1210701984Silentrs749563516N343N0.24
UCECchr1210719084Missense_MutationNAN108H0.06
UCECchr1210719094SilentnovelY104Y0.1
UCECchr12106993833'UTRnovel0.38
UCECchr1210701963Frame_Shift_DelnovelE351Rfs*370.52
UCECchr1210710105Frame_Shift_DelnovelE195Rfs*730.09
UCECchr1210713264Missense_Mutationrs748937054R174W0.39
UCECchr1210719089Missense_MutationNAF106C0.3
UCECchr1210704115Missense_MutationnovelP272S0.19
UCECchr1210704148Missense_MutationnovelA261T0.06
UCECchr12106991903'Flanknovel0.29
UCECchr1210702000Missense_MutationnovelR338H0.46
UCECchr1210710029Missense_Mutationrs143435496R220Q0.4
UCECchr12106994973'UTRnovel0.12
UCECchr1210710105Missense_MutationnovelE195K0.22
UCECchr1210713273Missense_Mutationrs747930990A171T0.38
UCECchr1210713304Silentrs201043365P160P0.33
UCECchr1210715758Missense_Mutationrs769907120R129Q0.37
UCECchr12106992793'UTRnovel0.31
UCECchr12106994343'UTRnovel0.2
UCECchr12106993893'UTRnovel0.36
UCECchr1210709983SilentNAR235R0.44
UCECchr12106992123'Flankrs5650282310.38
UCECchr1210701989Missense_MutationnovelP342S0.18
UCECchr1210702120Missense_Mutationrs201062345R298H0.32
UCECchr1210709973Missense_MutationnovelP239S0.59
UCECchr1210713245Missense_MutationnovelG180V0.28
UCECchr1210719081Nonsense_MutationNAR109*0.39
UCECchr12106992783'UTRnovel0.47
UCECchr1210704133Missense_MutationnovelE266K0.3
UCECchr1210704056Nonsense_MutationnovelY291*0.14
UCECchr1210719141Missense_MutationnovelT89A0.28
UCECchr1210710066Missense_MutationnovelD208Y0.4
UCECchr1210719084Missense_MutationNAN108H0.37
UCECchr1210702120Missense_Mutationrs201062345R298H0.3

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCADEL0.11520.05664
COADDEL0.09310.087189
DLBCDEL0.08330.11856
GBMDEL0.1040.0061973
LUADDEL0.20741.5736e-06
MESODEL0.08050.17495
PAADDEL0.13590.0019175
READDEL0.12730.064633
STADDEL0.15190.00030002
TGCTAMP0.94673.5918e-21
THYMAMP0.03250.24554

Survival Analysis
CancerP-value Q-value
THYM0.015

Kaplan-Meier Survival Analysis

KIRC0.00011

Kaplan-Meier Survival Analysis

ACC0.0012

Kaplan-Meier Survival Analysis

SKCM0.011

Kaplan-Meier Survival Analysis

ESCA0.027

Kaplan-Meier Survival Analysis

KIRP0.0043

Kaplan-Meier Survival Analysis

COAD0.043

Kaplan-Meier Survival Analysis

PAAD0.0026

Kaplan-Meier Survival Analysis

LAML0.0027

Kaplan-Meier Survival Analysis

LGG0.0001

Kaplan-Meier Survival Analysis

LUAD0.023

Kaplan-Meier Survival Analysis

Drugs

Select Dataset :


Input Drug :


Input Cell Line :


Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • PRI
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000060138 (Gene tree)
Gene ID
8531
Gene Symbol
YBX3
Alias
dbpA|ZONAB|CSDA1|CSDA
Full Name
Y-box binding protein 3
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
24,372 bases
Position
chr12:10,699,077-10,723,448
Accession
2428
RBP type
canonical RBP
Summary
(Y-Box Binding Protein 3) is a Protein Coding gene. Diseases associated with YBX3 include Lyme Disease and Uterine Inflammatory Disease. Among its related pathways are Apoptosis-related network due to altered Notch3 in ovarian cancer and Cytoskeleton remodeling Regulation of actin cytoskeleton by Rho GTPases. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and DNA-binding transcription factor activity. An important paralog of this gene is YBX1.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000279550CSDPF00313.221.6e-2511
ENSP00000228251CSDPF00313.221.9e-2511
ENSP00000485718CSDPF00313.224.1e-1411
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Click here to download all RNA binding sites

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
17562864LINE-1 ORF1 protein localizes in stress granules with other RNA-binding proteins, including components of RNA interference RNA-induced silencing complex.Mol Cell Biol2007 SepGoodier JL-
31189097The RNA-Binding Protein YBX3 Controls Amino Acid Levels by Regulating SLC mRNA Abundance.Cell Rep2019 Jun 11Cooke Adoi: 10.1016/j.celrep.2019.05.039.
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000366290YBX3-204512--- (aa)--
ENST00000366286YBX3-203704--- (aa)--
ENST00000540447YBX3-2086393--- (aa)--
ENST00000544622YBX3-216685XM_011520871ENSP0000048571892 (aa)XP_011519173A0A0D9SEI8
ENST00000228251YBX3-2011796XM_017020122ENSP00000228251372 (aa)XP_016875611P16989
ENST00000542002YBX3-212952--- (aa)--
ENST00000546164YBX3-217805--- (aa)--
ENST00000536107YBX3-205438--- (aa)--
ENST00000540975YBX3-210677--- (aa)--
ENST00000541351YBX3-211717--- (aa)--
ENST00000544501YBX3-214181--- (aa)--
ENST00000536823YBX3-206840--- (aa)--
ENST00000542641YBX3-213669--- (aa)--
ENST00000539204YBX3-207649--- (aa)--
ENST00000279550YBX3-2021708XM_017020123ENSP00000279550303 (aa)XP_016875612P16989
ENST00000540747YBX3-209548--- (aa)--
ENST00000544504YBX3-215583--- (aa)--
ENST00000546298YBX3-218564--- (aa)--
Gene Model
Click here to download ENSG00000060138's gene model file
Pathways
Pathway IDPathway NameSource
hsa04530Tight junctionKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000060138Cholesterol, LDL6.30753578670415E-517903299
ENSG00000060138Alanine Transaminase3.82e-005-
ENSG00000060138Alanine Transaminase7.249e-005-
ENSG00000060138Platelet Function Tests6.4000000E-006-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000060138's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000060138YBX37095.312ENSG00000065978YBX18555.034
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000060138YBX39196.429ENSAMEG00000009393YBX39590.000Ailuropoda_melanoleuca
ENSG00000060138YBX39195.238ENSAPLG00000003147YBX370100.000Anas_platyrhynchos
ENSG00000060138YBX39886.923ENSANAG00000033366-9386.923Aotus_nancymaae
ENSG00000060138YBX310097.043ENSANAG00000024492-10098.418Aotus_nancymaae
ENSG00000060138YBX389100.000ENSBTAG00000009663YBX310077.003Bos_taurus
ENSG00000060138YBX38290.667ENSCJAG00000033824-9891.892Callithrix_jacchus
ENSG00000060138YBX310095.968ENSCJAG00000021660-10095.968Callithrix_jacchus
ENSG00000060138YBX39197.619ENSCAFG00000013401YBX310092.202Canis_familiaris
ENSG00000060138YBX310087.467ENSCAFG00020006412YBX310086.400Canis_lupus_dingo
ENSG00000060138YBX39197.619ENSCHIG00000010863YBX310081.183Capra_hircus
ENSG00000060138YBX39197.619ENSTSYG00000004204-8894.774Carlito_syrichta
ENSG00000060138YBX310075.248ENSTSYG00000035821-9780.357Carlito_syrichta
ENSG00000060138YBX39197.619ENSCAPG00000015039YBX39386.760Cavia_aperea
ENSG00000060138YBX39197.619ENSCPOG00000011329YBX38687.713Cavia_porcellus
ENSG00000060138YBX310096.774ENSCCAG00000016469YBX310096.774Cebus_capucinus
ENSG00000060138YBX310098.660ENSCATG00000034411YBX310098.660Cercocebus_atys
ENSG00000060138YBX39196.429ENSCLAG00000016030YBX39487.108Chinchilla_lanigera
ENSG00000060138YBX310099.196ENSCSAG00000008744YBX310099.196Chlorocebus_sabaeus
ENSG00000060138YBX389100.000ENSCHOG00000011988YBX37783.237Choloepus_hoffmanni
ENSG00000060138YBX39297.647ENSCPBG00000014147YBX38178.840Chrysemys_picta_bellii
ENSG00000060138YBX39197.619ENSCANG00000036801YBX310098.413Colobus_angolensis_palliatus
ENSG00000060138YBX39197.619ENSCGRG00001016148Ybx310084.409Cricetulus_griseus_chok1gshd
ENSG00000060138YBX39197.619ENSCGRG00000004563Ybx39889.384Cricetulus_griseus_crigri
ENSG00000060138YBX39197.619ENSDORG00000009103Ybx38190.592Dipodomys_ordii
ENSG00000060138YBX39197.619ENSETEG00000002557YBX39984.155Echinops_telfairi
ENSG00000060138YBX310086.022ENSEASG00005014726YBX39788.764Equus_asinus_asinus
ENSG00000060138YBX310088.978ENSECAG00000013777YBX310089.516Equus_caballus
ENSG00000060138YBX39197.619ENSEEUG00000010415YBX310092.254Erinaceus_europaeus
ENSG00000060138YBX310092.246ENSFCAG00000027748YBX310093.770Felis_catus
ENSG00000060138YBX39789.888ENSFALG00000003661YBX37198.837Ficedula_albicollis
ENSG00000060138YBX39196.429ENSFDAG00000021192YBX39284.321Fukomys_damarensis
ENSG00000060138YBX38997.561ENSGALG00000031890YBX37097.849Gallus_gallus
ENSG00000060138YBX39297.647ENSGAGG00000017780YBX37782.960Gopherus_agassizii
ENSG00000060138YBX310099.732ENSGGOG00000001352YBX310099.732Gorilla_gorilla
ENSG00000060138YBX39194.048ENSHGLG00000014798-8676.431Heterocephalus_glaber_female
ENSG00000060138YBX388100.000ENSHGLG00000015495-8076.364Heterocephalus_glaber_female
ENSG00000060138YBX382100.000ENSHGLG00100003589YBX38788.532Heterocephalus_glaber_male
ENSG00000060138YBX39192.857ENSSTOG00000032577-10081.720Ictidomys_tridecemlineatus
ENSG00000060138YBX39197.619ENSSTOG00000002108-8886.411Ictidomys_tridecemlineatus
ENSG00000060138YBX38664.198ENSJJAG00000014239Ybx39685.227Jaculus_jaculus
ENSG00000060138YBX310091.398ENSLAFG00000017247YBX310091.935Loxodonta_africana
ENSG00000060138YBX310098.925ENSMFAG00000039369YBX310098.925Macaca_fascicularis
ENSG00000060138YBX39197.619ENSMMUG00000022469YBX310098.769Macaca_mulatta
ENSG00000060138YBX310098.656ENSMNEG00000045109YBX310098.656Macaca_nemestrina
ENSG00000060138YBX39197.619ENSMLEG00000033618YBX37998.606Mandrillus_leucophaeus
ENSG00000060138YBX39196.429ENSMGAG00000014224YBX393100.000Meleagris_gallopavo
ENSG00000060138YBX39197.619ENSMAUG00000012185Ybx39886.293Mesocricetus_auratus
ENSG00000060138YBX38997.561ENSMICG00000031459-10069.967Microcebus_murinus
ENSG00000060138YBX310090.591ENSMICG00000038002-10092.204Microcebus_murinus
ENSG00000060138YBX39197.619ENSMOCG00000016291Ybx39691.186Microtus_ochrogaster
ENSG00000060138YBX38997.561ENSMODG00000018248YBX39184.028Monodelphis_domestica
ENSG00000060138YBX39197.619MGP_CAROLIEiJ_G0028947Ybx310083.871Mus_caroli
ENSG00000060138YBX39197.619ENSMUSG00000030189Ybx310083.871Mus_musculus
ENSG00000060138YBX39197.619MGP_PahariEiJ_G0022709Ybx310084.409Mus_pahari
ENSG00000060138YBX39197.619MGP_SPRETEiJ_G0029994Ybx310084.140Mus_spretus
ENSG00000060138YBX310079.790ENSMPUG00000011810YBX310079.265Mustela_putorius_furo
ENSG00000060138YBX39197.619ENSMLUG00000007476YBX310091.450Myotis_lucifugus
ENSG00000060138YBX39196.429ENSNGAG00000000710Ybx39183.333Nannospalax_galili
ENSG00000060138YBX39594.085ENSNLEG00000034844YBX310094.085Nomascus_leucogenys
ENSG00000060138YBX37797.183ENSMEUG00000002507-8176.879Notamacropus_eugenii
ENSG00000060138YBX38280.921ENSODEG00000017957YBX39481.620Octodon_degus
ENSG00000060138YBX39197.619ENSOANG00000001663-7997.170Ornithorhynchus_anatinus
ENSG00000060138YBX39196.429ENSOCUG00000001889YBX38587.119Oryctolagus_cuniculus
ENSG00000060138YBX310089.974ENSOGAG00000013245YBX310089.710Otolemur_garnettii
ENSG00000060138YBX389100.000ENSOARG00000020919YBX39982.492Ovis_aries
ENSG00000060138YBX310092.742ENSPPAG00000039068YBX310092.742Pan_paniscus
ENSG00000060138YBX310091.979ENSPPRG00000005859YBX310093.443Panthera_pardus
ENSG00000060138YBX39197.619ENSPTIG00000005322YBX38192.334Panthera_tigris_altaica
ENSG00000060138YBX310099.465ENSPTRG00000004681YBX310099.465Pan_troglodytes
ENSG00000060138YBX310098.925ENSPANG00000010280YBX310098.925Papio_anubis
ENSG00000060138YBX39296.471ENSPSIG00000009247YBX395100.000Pelodiscus_sinensis
ENSG00000060138YBX39197.619ENSPEMG00000012132-9987.227Peromyscus_maniculatus_bairdii
ENSG00000060138YBX39395.349ENSPEMG00000010391-8591.150Peromyscus_maniculatus_bairdii
ENSG00000060138YBX38597.436ENSPCIG00000029949YBX310079.615Phascolarctos_cinereus
ENSG00000060138YBX310099.462ENSPPYG00000004279YBX310099.462Pongo_abelii
ENSG00000060138YBX39196.429ENSPCAG00000001397YBX395100.000Procavia_capensis
ENSG00000060138YBX37997.260ENSPCOG00000011663YBX310085.769Propithecus_coquereli
ENSG00000060138YBX39197.619ENSPVAG00000006740YBX37791.724Pteropus_vampyrus
ENSG00000060138YBX39197.619ENSRNOG00000005480Ybx310084.677Rattus_norvegicus
ENSG00000060138YBX310098.118ENSRBIG00000039208YBX310098.118Rhinopithecus_bieti
ENSG00000060138YBX310098.387ENSRROG00000029638YBX310098.387Rhinopithecus_roxellana
ENSG00000060138YBX39197.619ENSSBOG00000030573YBX38795.593Saimiri_boliviensis_boliviensis
ENSG00000060138YBX38997.561ENSSHAG00000003262YBX39880.756Sarcophilus_harrisii
ENSG00000060138YBX38997.590ENSSPUG00000009911-6687.857Sphenodon_punctatus
ENSG00000060138YBX39197.619ENSSSCG00000000633YBX310089.764Sus_scrofa
ENSG00000060138YBX39890.000ENSTGUG00000012047YBX37498.077Taeniopygia_guttata
ENSG00000060138YBX39197.619ENSTBEG00000012570YBX38194.539Tupaia_belangeri
ENSG00000060138YBX39197.619ENSTTRG00000008045YBX310084.586Tursiops_truncatus
ENSG00000060138YBX37594.203ENSUAMG00000016662YBX310088.489Ursus_americanus
ENSG00000060138YBX39196.429ENSUMAG00000016118YBX39491.638Ursus_maritimus
ENSG00000060138YBX357100.000ENSVPAG00000000876YBX310072.535Vicugna_pacos
ENSG00000060138YBX37997.260ENSVVUG00000004956YBX310089.209Vulpes_vulpes
ENSG00000060138YBX38293.333ENSXETG00000016239ybx39068.142Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II-IEAProcess
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding-IEAFunction
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific-ISAFunction
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific19274049.ISMFunction
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific19274049.NASFunction
GO:0001227DNA-binding transcription repressor activity, RNA polymerase II-specific-IEAFunction
GO:0001701in utero embryonic development-IEAProcess
GO:0003690double-stranded DNA binding2977358.TASFunction
GO:0003700DNA-binding transcription factor activity8710501.NASFunction
GO:0003714transcription corepressor activity8710501.TASFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003730mRNA 3'-UTR binding22711822.ISSFunction
GO:0005515protein binding25593058.IPIFunction
GO:0005634nucleus22711822.ISSComponent
GO:0005737cytoplasm7628487.TASComponent
GO:0005829cytosol-IDAComponent
GO:0005923bicellular tight junction22711822.ISSComponent
GO:0007283spermatogenesis-IEAProcess
GO:0008584male gonad development-IEAProcess
GO:0009409response to cold8710501.TASProcess
GO:0009566fertilization-IEAProcess
GO:0017048Rho GTPase binding-ISSFunction
GO:0046622positive regulation of organ growth-IEAProcess
GO:0048471perinuclear region of cytoplasm22711822.ISSComponent
GO:0048642negative regulation of skeletal muscle tissue development-IEAProcess
GO:0060546negative regulation of necroptotic process22711822.IMPProcess
GO:00709353'-UTR-mediated mRNA stabilization22711822.ICProcess
GO:0071356cellular response to tumor necrosis factor22711822.IMPProcess
GO:0071474cellular hyperosmotic response22711822.IMPProcess
GO:1902219negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress22711822.IMPProcess
GO:1905538polysome binding-IEAFunction
GO:2000767positive regulation of cytoplasmic translation22711822.ISSProcess
To top

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us