RNA binding proteome (RBPome)
| PID | Title | Method |
Time | Author | Doi |
|---|
| 30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & HEK293 | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
| 30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & HEK293 | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
| 29431736 | Capturing the interactome of newly transcribed RNA | PolyT-RICK & Hela | 2018 Feb 12 | Bao X | DOI: 10.1038/nmeth.4595 |
| 29431736 | Capturing the interactome of newly transcribed RNA | RICK & Hela | 2018 Feb 12 | Bao X | DOI: 10.1038/nmeth.4595 |
| 30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & Hela | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
| 30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & MCF10A | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
| 30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & U2OS | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
Protein-Protein Interaction (PPI)
* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
| Ensembl ID | Gene Symbol | Coverage | Identiy |
Ortholog | Gene Symbol | Coverage | Identiy |
Species |
|---|
| ENSG00000092841 | MYL6 | 100 | 40.426 | WBGene00003371 | mlc-3 | 91 | 46.429 | Caenorhabditis_elegans |
|---|
| ENSG00000092841 | MYL6 | 100 | 100.000 | ENSMUSG00000090841 | Myl6 | 100 | 100.000 | Mus_musculus |
|---|
| ENSG00000092841 | MYL6 | 99 | 74.172 | ENSMUSG00000061086 | Myl4 | 92 | 75.000 | Mus_musculus |
|---|
