EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
21075448The type III inositol 1,4,5-trisphosphate receptor is associated with aggressiveness of colorectal carcinoma.Cell Calcium2010 DecShibao Kdoi: 10.1016/j.ceca.2010.09.005
23992640Molecular interaction and functional coupling between type 3 inositol 1,4,5-trisphosphate receptor and BKCa channel stimulate breast cancer cell proliferation.Eur J Cancer2013 NovMound Adoi: 10.1016/j.ejca.2013.07.013
14666665Possible involvement of inositol 1,4,5-trisphosphate receptor type 3 (IP3R3) in the peritoneal dissemination of gastric cancers.Anticancer Res2003 Sep-OctSakakura C-

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr633683339Missense_MutationnovelP1577R0.29
ACCchr633689393Missense_MutationnovelI2284F0.43
ACCchr633671198Missense_MutationnovelG874S0.24
ACCchr633662569Missense_MutationnovelF251L0.47
ACCchr633689239Splice_Regionrs150616390G2232G0.25
BLCAchr633669030Missense_MutationnovelS688L0.36
BLCAchr633689298Missense_Mutationrs756560277A2252V0.06
BLCAchr633670813Missense_MutationnovelE862Q0.21
BLCAchr633689257SilentnovelL2238L0.14
BLCAchr633691699Missense_Mutationrs139781035S2437L0.59
BLCAchr633692847Silentrs149058562E2526E0.39
BLCAchr633693679Missense_MutationNAE2587Q0.45
BLCAchr633695641Intronnovel0.58
BLCAchr633669052SilentNAT695T0.18
BLCAchr633676789Nonsense_MutationnovelQ1102*0.08
BLCAchr633669125Frame_Shift_DelnovelA720Efs*490.06
BLCAchr633680552Splice_RegionNA0.26
BLCAchr633693702Missense_MutationnovelI2594M0.07
BLCAchr633676815SilentnovelI1110I0.14
BLCAchr633686474SilentnovelI1978I0.23
BLCAchr633670776Silentrs776612517V849V0.2
BLCAchr633685789SilentnovelL1877L0.41
BLCAchr633640517Silentrs777701344A41A0.2
BLCAchr633665202Missense_MutationNAQ466H0.21
BLCAchr633680131Missense_MutationnovelE1408K0.25
BLCAchr633671279Missense_MutationNAM901L0.5
BLCAchr633669016SilentnovelL683L0.23
BLCAchr633676765Splice_Regionnovel0.27
BLCAchr633655836SilentNAT77T0.43
BRCAchr633688666SilentnovelL2193L0.09
BRCAchr633679931Missense_Mutationrs755528499S1341L0.21
BRCAchr633686185Missense_Mutationrs778613128V1934M0.14
BRCAchr633695095Intronnovel0.33
BRCAchr633669111Missense_Mutationrs771869292A715V0.05
BRCAchr633669145SilentnovelL726L0.37
BRCAchr633680368Missense_MutationNAV1422M0.24
BRCAchr633687276Silentrs778571725S2042S0.17
BRCAchr633690104Missense_MutationnovelA2313G0.09
BRCAchr633677090Splice_SitenovelX1174_splice0.1
BRCAchr633695721Nonsense_MutationNAQ2653*0.71
BRCAchr633690084SilentnovelT2306T0.1
BRCAchr633680054Missense_MutationNAY1382F0.2
BRCAchr633663791Missense_MutationNAC353W0.18
BRCAchr633695174Intronnovel0.17
BRCAchr633691910SilentnovelL2480L0.07
BRCAchr633621657Missense_MutationNAE19K0.22
BRCAchr633640540Missense_MutationnovelP49L0.08
BRCAchr633688714SilentNAF2209F0.28
BRCAchr633688404Missense_MutationnovelE2181K0.27
BRCAchr633686119Missense_MutationNAD1912N0.21
BRCAchr633621657Missense_MutationNAE19Q0.24
BRCAchr633678725Silentrs144005144F1286F0.41
BRCAchr633693605Missense_MutationNAE2562A0.36
BRCAchr633694999Missense_MutationNAE2621K0.59
BRCAchr633691715SilentnovelL2442L0.09
BRCAchr633672108Missense_MutationNAF936L0.47
BRCAchr633679986SilentNAH1359H0.9
BRCAchr633672205Missense_Mutationrs373625572L969M0.38
CESCchr633695600Intronrs5470796670.31
CESCchr633672100Missense_MutationnovelS934T0.36
CESCchr633675769SilentnovelH1065H0.31
CESCchr633673637Missense_MutationnovelS992F0.16
CESCchr633688380Missense_Mutationrs578183913D2173N0.28
CESCchr633695740Missense_Mutationrs766896205R2659H0.36
CESCchr633688268Missense_MutationNAQ2135H0.13
CESCchr633665097Silentrs373612197I431I0.19
CESCchr633682574SilentnovelL1509L0.23
CESCchr633658699SilentnovelL133L0.17
CESCchr633680038Missense_MutationNAE1377K0.39
CESCchr6336958573'UTRrs5651024330.45
CESCchr633667186Missense_Mutationrs768879198R537W0.09
CESCchr633663500Missense_MutationnovelE319Q0.06
CHOLchr633663791Missense_MutationNAC353W0.21
CHOLchr633664890Missense_MutationnovelR390Q0.15
COADchr633677580Missense_MutationnovelM1200T0.14
COADchr633663822Missense_Mutationrs749099428A364T0.28
COADchr633695051Missense_MutationNAH2638R0.2
COADchr633683305Missense_MutationNAA1566T0.25
COADchr633665151Missense_MutationnovelS449R0.44
COADchr633688350Missense_MutationnovelE2163K0.08
COADchr633694811Intronnovel0.32
COADchr633676852Nonsense_MutationnovelK1123*0.29
COADchr633669073SilentnovelE702E0.22
COADchr633664875Missense_Mutationrs753753894S385L0.25
COADchr633658813SilentNAR171R0.21
COADchr633692839Missense_MutationNAR2524C0.35
COADchr633668567Missense_Mutationrs142075453V647I0.34
COADchr633662625Missense_Mutationrs777019225R270H0.39
COADchr633686435SilentnovelN1965N0.31
COADchr633658725Missense_MutationnovelL142S0.38
COADchr633672183SilentNAD961D0.19
COADchr633680562Missense_MutationNAS1453N0.35
COADchr633680028Silentrs758747831A1373A0.28
COADchr633663872Silentrs372786080F380F0.22
COADchr633667164Frame_Shift_DelNAG531Vfs*500.15
COADchr633686105Missense_MutationNAT1907M0.25
COADchr633686185Missense_Mutationrs778613128V1934M0.28
COADchr633655794SilentNAN63N0.18
COADchr633683284Missense_MutationNAA1559T0.28
COADchr633680636Missense_Mutationrs763726545A1478T0.39
COADchr633688323Missense_Mutationrs142820127R2154W0.37
COADchr633655769Missense_MutationnovelC55F0.14
COADchr633668555Missense_MutationnovelI643F0.18
COADchr633667898Frame_Shift_DelNAK608Sfs*660.34
COADchr633662612Nonsense_Mutationrs747619884R266*0.24
COADchr633670530Missense_Mutationrs767435428F799L0.21
COADchr633663804Missense_MutationNAP358S0.3
COADchr633670404Missense_MutationNAV757M0.13
COADchr633677053SilentnovelG1162G0.16
COADchr633687231Silentrs766466833D2027D0.1
COADchr633694944Frame_Shift_DelNAR2604Gfs*300.27
COADchr633675732Missense_Mutationrs770956589R1053H0.53
COADchr633676915Missense_MutationNAA1144T0.45
COADchr633682588Missense_MutationNAL1514P0.49
COADchr633684872Frame_Shift_DelNAN1746Tfs*300.2
COADchr633665882Missense_MutationNAV486A0.4
COADchr633680375Missense_MutationnovelT1424M0.1
COADchr633662932Missense_MutationNAR294C0.47
COADchr633682610Silentrs571319160S1521S0.46
COADchr633677516SilentNAL1179L0.17
COADchr633684800Missense_Mutationrs756479384A1722T0.15
COADchr633692791Missense_MutationNAV2508M0.3
COADchr633692830Missense_MutationNAA2521T0.43
COADchr633686145Silentrs202114409G1920G0.18
COADchr633670522Missense_Mutationrs762693746P796L0.3
COADchr633662584SilentNAE256E0.28
COADchr633680038Missense_MutationNAE1377K0.25
COADchr633680614Silentrs771140880S1470S0.31
COADchr633684634Missense_MutationNAL1695I0.26
COADchr633694899Intronnovel0.19
COADchr633687527Missense_MutationNAR2076H0.2
DLBCchr633665210Missense_Mutationrs778958478R469H0.23
ESCAchr633684143Missense_MutationnovelC1638R0.09
ESCAchr633693672Silentrs183531106T2584T0.11
ESCAchr6336959983'UTRnovel0.41
ESCAchr633685804Missense_MutationnovelE1882Q0.31
ESCAchr633678456Silentrs543118868T1228T0.36
ESCAchr633685409Silentrs747022423F1786F0.11
GBMchr633676818Missense_MutationnovelK1111N0.32
GBMchr633694810Intronnovel0.27
GBMchr633685705Missense_Mutationrs201614062R1849C0.29
GBMchr633665858Missense_MutationnovelD478A0.05
GBMchr633695153Intronnovel0.77
GBMchr633659079Missense_MutationnovelA196V0.28
GBMchr633667932SilentnovelF618F0.29
GBMchr633673711Missense_MutationnovelD1017Y0.32
GBMchr633685503Missense_MutationnovelD1818Y0.52
GBMchr633680645Missense_MutationnovelS1481C0.08
GBMchr633695588IntronNA0.49
GBMchr633693587Missense_MutationnovelE2556V0.21
GBMchr633665845Nonsense_MutationNAQ474*0.23
GBMchr633676838Missense_MutationNAR1118Q0.1
GBMchr633665878Missense_Mutationrs748147185D485N0.41
GBMchr633672045SilentnovelR915R0.18
GBMchr633685705Missense_Mutationrs201614062R1849C0.49
GBMchr633688161Missense_MutationnovelQ2123H0.3
GBMchr633695147Intronnovel0.19
GBMchr633680590SilentnovelP1462P0.08
GBMchr633686105Missense_MutationNAT1907M0.32
GBMchr633680591Missense_MutationnovelT1463S0.17
GBMchr633695666Intronnovel0.05
GBMchr633691008Missense_MutationnovelL2375Q0.08
HNSCchr633678807Missense_MutationnovelV1314L0.37
HNSCchr633688753Missense_MutationnovelF2222L0.2
HNSCchr633689275Missense_MutationnovelW2244C0.2
HNSCchr633695700Intronnovel0.26
HNSCchr633684419Missense_MutationnovelR1667P0.28
HNSCchr633692772SilentnovelF2501F0.16
HNSCchr633665874SilentnovelV483V0.12
HNSCchr633669133Frame_Shift_DelnovelD722Efs*120.08
HNSCchr633686189Missense_MutationnovelG1935D0.21
HNSCchr633692778Silentrs767020507I2503I0.49
HNSCchr633689235Splice_Regionnovel0.41
HNSCchr633669101Missense_MutationnovelA712T0.09
HNSCchr633690992SilentnovelL2370L0.06
HNSCchr633692734Missense_MutationnovelL2489V0.16
HNSCchr633670526SilentnovelV797V0.12
HNSCchr633675743Missense_Mutationrs556088693R1057C0.09
HNSCchr633695076SilentnovelL2646L0.37
HNSCchr633691621Missense_Mutationrs752938750P2411H0.57
HNSCchr633689397Frame_Shift_InsnovelA2287Cfs*260.44
HNSCchr633692778Silentrs767020507I2503I0.33
HNSCchr633691829SilentnovelR2453R0.24
HNSCchr633668581SilentNAL651L0.25
KIRCchr633683215Missense_MutationnovelR1536W0.27
KIRCchr633662618Missense_MutationNAT268A0.13
KIRCchr633694870Intronnovel0.35
KIRCchr633672102Silentrs370555491S934S0.24
KIRCchr633695653Intronnovel0.25
KIRPchr633695679Intronnovel0.06
KIRPchr633676822Missense_MutationNAE1113K0.25
KIRPchr633670404Missense_MutationnovelV757L0.88
KIRPchr633665098Missense_MutationNAV432M0.76
LAMLchr633689344Silentrs761992573A2267A0.47
LAMLchr633685708Frame_Shift_InsnovelH1852Afs*110.33
LAMLchr633670690Missense_Mutationrs747839088A821T0.38
LGGchr633670689Silentrs778513669N820N0.1
LGGchr633664902Missense_MutationNAT394N0.07
LGGchr633670491Missense_Mutationrs577602247V786M0.58
LGGchr633675745Silentrs774110911R1057R0.25
LGGchr633688324Missense_Mutationrs756358608R2154Q0.28
LGGchr633682560Missense_Mutationrs757325241T1505A0.39
LGGchr633665184Silentrs780808015N460N0.31
LGGchr633665908Missense_MutationnovelD495Y0.12
LGGchr633667240Missense_MutationnovelL555M0.39
LGGchr633685426Missense_Mutationrs778950448R1792H0.3
LGGchr633687305Missense_Mutationrs373691310N2052S0.36
LGGchr633689355Missense_MutationNAR2271H0.37
LGGchr633695569Intronnovel0.43
LGGchr633657995Missense_Mutationrs768293062V116M0.17
LGGchr633659107Silentrs755640976A205A0.46
LGGchr633664950Missense_Mutationrs765845561E410G0.33
LGGchr633688370SilentnovelS2169S0.09
LGGchr633667238Missense_Mutationrs776134726R554H0.14
LIHCchr633640504Missense_MutationnovelV37A0.31
LIHCchr633663842Missense_MutationnovelD370E0.31
LIHCchr633670458Missense_MutationnovelA775S0.36
LIHCchr633689333Missense_MutationNAL2264I0.42
LIHCchr633683329Missense_Mutationrs531158838R1574W0.38
LIHCchr633687099Missense_MutationnovelE2024Q0.1
LIHCchr633687317Missense_MutationNAL2056Q0.49
LIHCchr633677081Missense_Mutationrs147513071V1172I0.16
LIHCchr633675780Missense_MutationNAP1069L0.28
LIHCchr633684642Missense_MutationNAN1697K0.31
LIHCchr633672080Missense_MutationNAM927T0.33
LIHCchr633678461Missense_MutationNAQ1230R0.3
LIHCchr633689333Missense_MutationNAL2264I0.07
LIHCchr633684463Missense_Mutationrs748669362R1682W0.09
LUADchr633688342Missense_MutationnovelE2160G0.1
LUADchr633678756Missense_MutationnovelV1297L0.26
LUADchr633680615Missense_MutationnovelV1471F0.26
LUADchr633658828Splice_Regionrs116499996N176N0.1
LUADchr633659530Missense_MutationNAL231Q0.28
LUADchr633670340Silentrs757011659L735L0.34
LUADchr633680552Splice_RegionNA0.24
LUADchr633687275Missense_MutationNAS2042L0.39
LUADchr633685676Nonsense_MutationNAS1839*0.25
LUADchr633691054Missense_MutationNAF2390L0.73
LUADchr633667921Missense_MutationnovelV615L0.15
LUADchr633667197Missense_MutationNAE540D0.36
LUADchr633690184Missense_MutationnovelF2340L0.35
LUADchr633684664Missense_MutationNAD1705Y0.22
LUADchr633670668Splice_Regionnovel0.22
LUADchr633669022Silentrs561046732I685I0.1
LUADchr633672105SilentnovelV935V0.09
LUADchr633690935Missense_MutationNAR2351C0.19
LUADchr633687080SilentNAL2017L0.18
LUADchr633676913Missense_MutationNAA1143G0.23
LUADchr633691638Nonsense_MutationnovelG2417*0.54
LUADchr633658801Silentrs370534623F167F0.29
LUADchr633684659Frame_Shift_Delrs753781307D1705Tfs*60.16
LUADchr633664902Missense_MutationNAT394N0.31
LUADchr633664962Missense_MutationNAR414L0.27
LUADchr633684828Missense_MutationnovelE1731A0.35
LUADchr633682583Silentrs773138921P1512P0.18
LUADchr633670454SilentnovelL773L0.29
LUADchr633670455Missense_Mutationrs200526442R774C0.29
LUADchr633689235Splice_Regionnovel0.1
LUADchr633640539Missense_MutationNAP49S0.3
LUSCchr633671245SilentnovelL889L0.1
LUSCchr633688289Silentrs752663456G2142G0.28
LUSCchr633663872Silentrs372786080F380F0.14
LUSCchr633684364Missense_MutationnovelQ1649K0.23
LUSCchr633659062SilentNAA190A0.12
LUSCchr633659063Missense_MutationNAG191W0.11
LUSCchr633684453Silentrs755082712K1678K0.16
LUSCchr633664897SilentnovelL392L0.48
LUSCchr633680555Missense_MutationnovelV1451L0.26
LUSCchr633673641SilentNAV993V0.54
LUSCchr633689255Missense_MutationnovelL2238V0.26
LUSCchr633685804Missense_MutationnovelE1882Q0.66
LUSCchr633664952Missense_MutationnovelR411W0.25
LUSCchr633665213Missense_MutationnovelR470M0.12
LUSCchr633672127Missense_MutationnovelA943S0.09
LUSCchr633667211Missense_MutationNAK545R0.27
LUSCchr633685471Missense_MutationnovelN1807S0.13
LUSCchr633694784Intronnovel0.5
LUSCchr633670692SilentNAA821A0.2
LUSCchr633684603SilentnovelN1684N0.13
LUSCchr633692784In_Frame_InsnovelI2506_I2507dup0.3
LUSCchr633658748Missense_MutationnovelV150M0.56
LUSCchr633670776SilentnovelV849V0.51
LUSCchr633695715Missense_MutationnovelT2651S0.16
LUSCchr633664880Missense_MutationNAV387F0.57
LUSCchr633684803Missense_MutationnovelA1723T0.31
LUSCchr633680067Missense_MutationnovelK1386N0.58
LUSCchr633687560Missense_MutationnovelS2087C0.13
LUSCchr633659029Frame_Shift_DelnovelD181Tfs*30.79
LUSCchr633670748Missense_MutationnovelY840C0.39
OVchr633695106Intronnovel0.04
OVchr633658705SilentnovelV135V0.04
OVchr633680085SilentnovelP1392P0.04
OVchr633695576Intronnovel0.28
OVchr633679929Frame_Shift_InsnovelS1341Vfs*440.09
OVchr633674258Missense_MutationnovelG1037R0.08
OVchr633684818SilentnovelL1728L0.1
OVchr633690987In_Frame_DelnovelS2368_I2369delinsF0.17
OVchr633690062Missense_MutationnovelS2299I0.08
OVchr633694969Frame_Shift_InsnovelV2611Afs*240.09
OVchr633673627Missense_MutationnovelY989D0.06
OVchr633680664Missense_MutationNAN1487S0.2
OVchr633688390Missense_MutationnovelS2176F0.18
OVchr633695000Missense_MutationnovelE2621V0.2
OVchr633680389Nonsense_MutationnovelK1429*0.08
OVchr633695008Missense_MutationnovelI2624L0.64
OVchr633664949Missense_MutationNAE410K0.47
OVchr633690034Missense_MutationnovelL2290M0.06
OVchr633667233Missense_MutationnovelM552I0.25
OVchr633659119Frame_Shift_InsnovelV210Cfs*460.14
OVchr633691847Missense_MutationnovelL2459F0.05
OVchr633672027Splice_SiteNAX910_splice0.31
OVchr633668581SilentNAL651L0.18
OVchr633671226Missense_MutationnovelR883P0.08
PAADchr633672049Missense_Mutationrs754127262I917V0.12
PAADchr633659117Nonsense_MutationnovelE209*0.04
PAADchr633662641Silentrs569007497S275S0.15
PAADchr633665917Missense_MutationnovelV498F0.18
PAADchr633667186Missense_Mutationrs768879198R537W0.16
PAADchr633684389Missense_Mutationrs766016611S1657L0.18
PAADchr633688255Missense_Mutationrs766040259R2131H0.16
PAADchr633695739Missense_Mutationrs138851075R2659C0.18
PAADchr6336958303'UTRrs7771895920.17
PCPGchr633684827Missense_MutationnovelE1731K0.08
PRADchr633684851Missense_MutationnovelD1739H0.2
PRADchr633691085SilentnovelR2401R0.05
PRADchr633677073Frame_Shift_DelnovelY1169Sfs*110.03
PRADchr633672040Missense_Mutationrs566710188R914W0.27
PRADchr633686184Silentrs149221361N1933N0.25
PRADchr633688258Missense_MutationnovelS2132I0.42
PRADchr633695695Intronnovel0.31
PRADchr633688420Missense_Mutationrs763958223R2186H0.09
READchr633691075SilentNAL2397L0.27
READchr633691090Silentrs751450550L2402L0.34
READchr633676912Missense_Mutationrs373241450A1143T0.3
SARCchr633662931SilentnovelC293C0.47
SARCchr633662932Missense_MutationNAR294C0.47
SARCchr633687319Missense_MutationnovelA2057S0.13
SARCchr633678473Missense_MutationnovelK1234R0.42
SKCMchr633663851SilentNAT373T0.15
SKCMchr633658737Missense_MutationnovelN146S0.19
SKCMchr633658738Silentrs2296344N146N0.2
SKCMchr633667962Splice_RegionnovelP628P0.35
SKCMchr633680009Missense_MutationNAS1367F0.14
SKCMchr633678773SilentnovelF1302F0.3
SKCMchr633688301SilentNAF2146F0.27
SKCMchr633665089Missense_MutationnovelF429V0.15
SKCMchr633673593Splice_RegionNAF977F0.15
SKCMchr633676842SilentnovelT1119T0.21
SKCMchr6336958493'UTRnovel0.31
SKCMchr633655794SilentNAN63N0.09
SKCMchr633665109SilentNAP435P0.17
SKCMchr633680352Silentrs201389648F1416F0.27
SKCMchr633672047Missense_MutationNAS916F0.35
SKCMchr633672153SilentNAL951L0.3
SKCMchr633640508SilentNAV38V0.12
SKCMchr633675784SilentNAL1070L0.09
SKCMchr633682582Missense_Mutationrs771517190P1512L0.26
SKCMchr633686115SilentNAF1910F0.18
SKCMchr633680438Missense_MutationNAT1445I0.15
SKCMchr633667216Missense_Mutationrs752466498A547T0.21
SKCMchr633690066Silentrs749018804F2300F0.35
SKCMchr633679931Missense_Mutationrs755528499S1341L0.25
SKCMchr633688710Missense_MutationNAS2208F0.52
SKCMchr633684785Missense_MutationNAD1717N0.27
SKCMchr633684914SilentNAL1760L0.49
SKCMchr633685780SilentnovelL1874L0.38
SKCMchr633691893Missense_MutationnovelG2475S0.22
SKCMchr633692764Silentrs772189956L2499L0.26
SKCMchr633662570SilentNAL252L0.35
SKCMchr633688750SilentNAF2221F0.24
SKCMchr633672181Missense_MutationNAD961Y0.16
SKCMchr633688394SilentNAF2177F0.84
SKCMchr633685757Missense_MutationNAS1866F0.23
SKCMchr633662602SilentnovelQ262Q0.96
SKCMchr633669054Nonsense_MutationnovelW696*0.17
SKCMchr633669055Missense_MutationnovelW696C0.17
SKCMchr633640539Missense_MutationNAP49S0.19
SKCMchr633640540Missense_MutationnovelP49L0.19
SKCMchr633692882Missense_MutationNAC2538Y0.32
SKCMchr633673593Splice_RegionNAF977F0.15
SKCMchr633684889SilentnovelQ1751Q0.29
SKCMchr633684890Missense_MutationnovelE1752K0.29
SKCMchr633664936SilentnovelI405I0.26
SKCMchr633665065Missense_MutationnovelP421S0.36
SKCMchr633686502SilentnovelL1988L0.54
SKCMchr633640539Missense_MutationNAP49S0.24
STADchr633640497Missense_MutationNAR35C0.36
STADchr633640534Frame_Shift_InsnovelK50*0.16
STADchr633670458Missense_MutationNAA775T0.19
STADchr633691619Frame_Shift_DelNAL2412Wfs*480.46
STADchr633670774Missense_Mutationrs200072171V849M0.07
STADchr633667156Missense_Mutationrs139434169R527C0.28
STADchr633685726Missense_MutationNAE1856K0.31
STADchr633691700Silentrs113565114S2437S0.68
STADchr633680364SilentNAC1420C0.12
STADchr633682566Missense_Mutationrs746407544R1507C0.26
STADchr633675727SilentnovelG1051G0.17
STADchr633686106Silentrs189648121T1907T0.23
STADchr633669046Missense_MutationNAW693C0.32
STADchr633691086Missense_MutationNAR2401L0.42
STADchr633664927SilentNAN402N0.37
STADchr633684659Frame_Shift_Delrs753781307D1705Tfs*60.26
STADchr633691109Missense_MutationNAA2409S0.23
STADchr633667164Frame_Shift_DelNAG531Vfs*500.28
STADchr633679963Missense_Mutationrs368822884A1352T0.5
STADchr633683299Missense_MutationnovelR1564W1
STADchr633685652Missense_Mutationrs776342387A1831V0.36
STADchr633658740Missense_MutationNAA147V0.67
STADchr633668541Missense_Mutationrs770317269C638Y0.54
STADchr633670692Silentrs202110116A821A0.26
STADchr633684852Missense_MutationNAD1739G0.08
STADchr633684924Missense_MutationNAG1763A0.14
STADchr633677070Missense_MutationnovelN1168T0.44
STADchr633684077Missense_Mutationrs753819461V1616M0.4
STADchr633688726Silentrs750196911V2213V0.24
STADchr633680398Missense_MutationNAY1432H0.16
STADchr633694983Silentrs141751520G2615G0.47
STADchr633678724Missense_MutationnovelF1286C0.44
STADchr633663872Silentrs372786080F380F0.32
STADchr633670455Missense_Mutationrs200526442R774C0.34
STADchr633673710Silentrs146528103F1016F0.32
STADchr633690939Missense_MutationNAE2352G0.2
STADchr633670386Missense_MutationNAI751L0.21
STADchr633670347Missense_Mutationrs780991974R738C0.12
STADchr633688780Splice_RegionnovelT2231T0.08
STADchr633695072Missense_MutationNAE2645G0.19
STADchr633686426Silentrs145776727H1962H0.19
STADchr633665103Silentrs753117025S433S0.17
STADchr633693698Missense_MutationnovelM2593T0.11
STADchr633663759Missense_Mutationrs369824854R343C0.11
STADchr633689297Missense_MutationNAA2252S0.07
STADchr633695629Intronrs610518800.12
STADchr633687289Missense_Mutationrs760282940R2047C0.2
STADchr633675729Missense_MutationNAG1052D0.27
STADchr633695731Missense_MutationNAR2656H0.2
STADchr633640491Missense_MutationnovelD33H0.14
STADchr633684875Missense_MutationNAE1747K0.29
STADchr633685689Silentrs772326452S1843S0.29
STADchr633680651Missense_MutationnovelP1483T0.08
STADchr633674229Missense_MutationNAR1027H0.3
STADchr633689328Missense_Mutationrs776633313R2262H0.23
STADchr633640520Silentrs141205726A42A0.38
STADchr633695683Intronnovel0.19
STADchr633655830SilentNAK75K0.22
STADchr633670692Silentrs202110116A821A0.24
STADchr633689382Missense_MutationNAP2280H0.27
STADchr633694894Intronnovel0.26
STADchr633684800Missense_Mutationrs756479384A1722T0.19
STADchr633688663Silentrs762470840P2192P0.34
STADchr633692839Missense_MutationNAR2524C0.1
STADchr633671178Missense_MutationNAA867V0.21
STADchr633693557Missense_MutationNAD2546G0.18
STADchr633640515Missense_Mutationrs149697160A41T0.91
TGCTchr633684643Missense_MutationnovelR1698G0.22
THCAchr633695534Intronnovel0.14
UCECchr633657936Missense_Mutationrs376628421A96V0.43
UCECchr633677537Frame_Shift_DelnovelE1187Sfs*30.38
UCECchr633663751Missense_Mutationrs773223069R340H0.46
UCECchr633655796Missense_Mutationrs747527908R64H0.44
UCECchr633657938Missense_MutationnovelA97T0.17
UCECchr633672056Missense_MutationnovelG919D0.47
UCECchr633680636Missense_Mutationrs763726545A1478T0.15
UCECchr633691912Missense_Mutationrs747686553R2481H0.44
UCECchr6336960073'UTRnovel0.49
UCECchr633665076SilentNAE424E0.33
UCECchr633688349Silentrs772497157D2162D0.4
UCECchr633684871Missense_MutationnovelK1745N0.29
UCECchr633695005Missense_Mutationrs778145976R2623W0.09
UCECchr633669157Splice_SiteNAX730_splice0.54
UCECchr633678456Silentrs543118868T1228T0.49
UCECchr633680004SilentnovelH1365H0.4
UCECchr633690049Missense_Mutationrs59525809V2295M0.38
UCECchr633621682Missense_MutationnovelS27I0.22
UCECchr633658720Silentrs149436819P140P0.48
UCECchr633662625Missense_Mutationrs777019225R270H0.36
UCECchr633664909Silentrs548084731T396T0.45
UCECchr633669131Missense_Mutationrs753604364D722N0.41
UCECchr633670756Missense_MutationnovelN843D0.31
UCECchr633676795Missense_MutationnovelV1104M0.45
UCECchr633680105Missense_MutationnovelV1399A0.41
UCECchr633682535Silentrs372206046T1496T0.31
UCECchr633692821Missense_MutationnovelD2518N0.3
UCECchr633662938Nonsense_MutationNAG296*0.24
UCECchr633668996Missense_MutationnovelA677T0.08
UCECchr633669147Missense_MutationnovelS727I0.21
UCECchr633670332SilentnovelL733L0.08
UCECchr633692843Missense_MutationnovelS2525I0.04
UCECchr633695173Intronnovel0.22
UCECchr633663822Missense_Mutationrs749099428A364T0.43
UCECchr633667216Missense_Mutationrs752466498A547T0.17
UCECchr633688247SilentnovelR2128R0.44
UCECchr633675828Missense_MutationnovelR1085H0.13
UCECchr633693654Silentrs769686159K2578K0.12
UCECchr633658000Missense_MutationnovelK117N0.29
UCECchr633692840Missense_MutationNAR2524H0.23
UCECchr633667157Missense_Mutationrs377347193R527H0.18
UCECchr633667937Missense_MutationnovelS620N0.13
UCECchr633668559Missense_MutationnovelA644V0.32
UCECchr633674207Splice_SiteNAX1020_splice0.12
UCECchr633667152SilentNAP525P0.43
UCECchr633675729Missense_MutationNAG1052D0.33
UCECchr633669023Missense_MutationnovelE686K0.21
UCECchr633686442Missense_MutationnovelD1968Y0.07
UCECchr633665061SilentnovelT419T0.38
UCECchr633668604Missense_MutationnovelP659H0.37
UCECchr633680567Missense_Mutationrs760310772R1455C0.36
UCECchr633676794Silentrs371286972D1103D0.42
UCECchr633673683Frame_Shift_InsnovelA1009Gfs*20.33
UCECchr633669125Missense_Mutationrs750764933A720T0.31
UCECchr633692853SilentNAQ2528Q0.21
UCECchr633670690Missense_Mutationrs747839088A821T0.27
UCECchr633672113Frame_Shift_DelnovelS940Afs*250.33
UCECchr633662665Missense_MutationnovelW283C0.11
UCECchr633678471SilentnovelQ1233Q0.47
UCECchr6336957913'UTRrs7810329750.31
UCECchr633640514Silentrs764696860P40P0.6
UCECchr633658721Missense_MutationnovelA141T0.38
UCECchr633665187SilentnovelE461E0.46
UCECchr633691044Missense_MutationnovelG2387D0.44
UCECchr633667152SilentNAP525P0.38
UCECchr633692840Missense_MutationNAR2524H0.22
UCECchr633677080Silentrs375729259I1171I0.49
UCECchr633682635Missense_MutationnovelA1530T0.3
UCECchr633689296Silentrs750556387I2251I0.42
UCECchr6336960613'UTRnovel0.1
UCECchr633664968Missense_MutationNAM416T0.3
UCECchr633662559Missense_MutationnovelQ248R0.37
UCECchr633662641Silentrs569007497S275S0.35
UCECchr633687320Missense_Mutationrs756219025A2057V0.38
UCECchr633694980Missense_MutationNAE2614D0.29
UCECchr633655765Splice_SitenovelX54_splice0.21
UCECchr633684883SilentnovelI1749I0.29
UCECchr633674229Missense_MutationNAR1027H0.53
UCECchr633694696Intronnovel0.21
UCECchr633683328Silentrs746631398T1573T0.32
UCECchr633662625Missense_Mutationrs777019225R270H0.42
UCECchr633663872Silentrs372786080F380F0.22
UCECchr6336965203'UTRrs5725005930.19
UCECchr633670472SilentnovelH779H0.52
UCECchr633662576Missense_MutationnovelC254R0.61
UCECchr633663760Missense_Mutationrs150170523R343H0.1
UCECchr633684146Missense_Mutationrs369673229E1639K0.32
UCECchr633686189Missense_MutationnovelG1935D0.38
UCECchr6336961623'UTRrs5355703710.3
UCECchr633669073SilentnovelE702E0.29
UCECchr633690066Silentrs749018804F2300F0.3
UCECchr633675744Missense_Mutationrs763191989R1057H0.4
UCECchr633680074Missense_MutationnovelS1389P0.46
UCECchr633670348Missense_Mutationrs749462828R738H0.4
UCECchr633679963Missense_Mutationrs368822884A1352T0.33
UCECchr633690048Silentrs146604048I2294I0.34
UCECchr633693606Missense_MutationnovelE2562D0.4
UCECchr633695142Intronnovel0.28
UCECchr6336215585'UTRnovel0.33
UCECchr633672058Missense_Mutationrs779072484V920M0.24
UCECchr633655858Missense_Mutationrs766342194A85T0.47
UCECchr6336965423'UTRnovel0.59
UCECchr633665098Missense_MutationNAV432M0.39
UCECchr633669142SilentnovelV725V0.47
UCECchr633689381Missense_MutationNAP2280T0.43
UCECchr6336958263'UTRnovel0.52
UCECchr633663868Missense_MutationNAS379Y0.24
UCECchr633687504SilentNAQ2068Q0.57
UCECchr633677614Missense_MutationnovelQ1211H0.29
UCECchr633687091Missense_Mutationrs773891536R2021Q0.32
UCECchr633687305Missense_MutationNAN2052T0.48
UCECchr633670737Silentrs2229635F836F0.47
UCECchr633671179Silentrs768456799A867A0.32
UCECchr633675732Missense_Mutationrs770956589R1053H0.21
UCECchr633687527Missense_MutationNAR2076H0.41
UCECchr633659520Missense_Mutationrs760333138R228W0.33
UCECchr633677608SilentNAL1209L0.46
UCECchr633688721Missense_MutationnovelA2212T0.29
UCECchr633692794Silentrs375962763L2509L0.23
UCECchr6336964003'UTRnovel0.26
UCECchr633667859Missense_MutationNAT594I0.38
UCECchr633675853SilentnovelK1093K0.15
UCECchr633670498Missense_MutationnovelR788H0.37
UCECchr633663756Missense_MutationnovelG342S0.41
UCECchr633670520Silentrs774973210T795T0.23
UCECchr633685734SilentnovelV1858V0.22
UCECchr633686063Missense_MutationnovelR1893H0.23
UCECchr633686194Missense_Mutationrs146844329V1937I0.32
UCECchr633691085Missense_Mutationrs370516286R2401W0.19
UCECchr633691886Silentrs750689163N2472N0.2
UCECchr633695101Intronnovel0.39
UCECchr6336965693'UTRnovel0.36
UCECchr633674249Missense_MutationnovelA1034T0.51
UCECchr633694955Missense_Mutationrs148037665R2606Q0.39
UCECchr633680096Missense_MutationnovelV1396A0.44
UCECchr633658712Missense_Mutationrs759577490R138W0.36
UCECchr633662624Missense_MutationNAR270C0.33
UCECchr633676862Missense_MutationNAL1126P0.24
UCECchr633687072Nonsense_Mutationrs763696426R2015*0.27
UCECchr633657968Missense_MutationnovelE107K0.41
UCECchr633663822Missense_Mutationrs749099428A364T0.45
UCECchr633667933Missense_Mutationrs773850087V619I0.34
UCECchr633668535Missense_MutationnovelD636G0.54
UCECchr633687048Missense_Mutationrs577534374R2007W0.42
UCECchr633688307Silentrs771212054T2148T0.45
UCECchr633693649Missense_Mutationrs780438879V2577M0.25
UCECchr633668572SilentnovelT648T0.1
UCECchr633670455Missense_Mutationrs200526442R774C0.3
UCECchr633688135Missense_MutationnovelA2115T0.33
UCECchr633691700Silentrs113565114S2437S0.46
UCECchr633692779Missense_Mutationrs754218342V2504I0.35
UCECchr633691700SilentnovelS2437S0.33
UCSchr633662574Missense_MutationnovelT253M0.6
UVMchr633687044SilentnovelE2005E0.65

Copy Number Variations (CNVs)
CancerTypeFreq Q-value

Survival Analysis
CancerP-value Q-value
ESCA0.038

Kaplan-Meier Survival Analysis

PAAD0.0067

Kaplan-Meier Survival Analysis

CESC0.014

Kaplan-Meier Survival Analysis

READ0.00022

Kaplan-Meier Survival Analysis

GBM0.026

Kaplan-Meier Survival Analysis

LIHC0.027

Kaplan-Meier Survival Analysis

LGG0.02

Kaplan-Meier Survival Analysis

CHOL0.027

Kaplan-Meier Survival Analysis

OV0.029

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000096433 (Gene tree)
Gene ID
3710
Gene Symbol
ITPR3
Alias
IP3R3
Full Name
inositol 1,4,5-trisphosphate receptor type 3
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
76,210 bases
Position
chr6:33,620,365-33,696,574
Accession
6182
RBP type
non-canonical RBP
Summary
This gene encodes a receptor for inositol 1,4,5-trisphosphate, a second messenger that mediates the release of intracellular calcium. The receptor contains a calcium channel at the C-terminus and the ligand-binding site at the N-terminus. Knockout studies in mice suggest that type 2 and type 3 inositol 1,4,5-trisphosphate receptors play a key role in exocrine secretion underlying energy metabolism and growth. [provided by RefSeq, Aug 2010]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
30917677Atheroprotective Flow Upregulates ITPR3 (Inositol 1,4,5-Trisphosphate Receptor 3) in Vascular Endothelium via KLF4 (Kruppel-Like Factor 4)-Mediated Histone Modifications.Arterioscler Thromb Vasc Biol2019 MayHe Mdoi: 10.1161/ATVBAHA.118.312301.
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000605930ITPR3-2029029XM_011514577ENSP000004751772671 (aa)XP_011512879Q14573
ENST00000374316ITPR3-2019870-ENSP000003634352671 (aa)-Q14573
Gene Model
Click here to download ENSG00000096433's gene model file
Pathways
Pathway IDPathway NameSource
hsa04020Calcium signaling pathwayKEGG
hsa04022cGMP-PKG signaling pathwayKEGG
hsa04070Phosphatidylinositol signaling systemKEGG
hsa04114Oocyte meiosisKEGG
hsa04210ApoptosisKEGG
hsa04218Cellular senescenceKEGG
hsa04270Vascular smooth muscle contractionKEGG
hsa04371Apelin signaling pathwayKEGG
hsa04540Gap junctionKEGG
hsa04611Platelet activationKEGG
hsa04621NOD-like receptor signaling pathwayKEGG
hsa04625C-type lectin receptor signaling pathwayKEGG
hsa04713Circadian entrainmentKEGG
hsa04720Long-term potentiationKEGG
hsa04723Retrograde endocannabinoid signalingKEGG
hsa04724Glutamatergic synapseKEGG
hsa04725Cholinergic synapseKEGG
hsa04726Serotonergic synapseKEGG
hsa04728Dopaminergic synapseKEGG
hsa04730Long-term depressionKEGG
hsa04742Taste transductionKEGG
hsa04750Inflammatory mediator regulation of TRP channelsKEGG
hsa04911Insulin secretionKEGG
hsa04912GnRH signaling pathwayKEGG
hsa04915Estrogen signaling pathwayKEGG
hsa04918Thyroid hormone synthesisKEGG
hsa04921Oxytocin signaling pathwayKEGG
hsa04922Glucagon signaling pathwayKEGG
hsa04924Renin secretionKEGG
hsa04925Aldosterone synthesis and secretionKEGG
hsa04927Cortisol synthesis and secretionKEGG
hsa04928Parathyroid hormone synthesis, secretion and actionKEGG
hsa04934Cushing syndromeKEGG
hsa04970Salivary secretionKEGG
hsa04971Gastric acid secretionKEGG
hsa04972Pancreatic secretionKEGG
hsa05010Alzheimer diseaseKEGG
hsa05163Human cytomegalovirus infectionKEGG
hsa05167Kaposi sarcoma-associated herpesvirus infectionKEGG
hsa05170Human immunodeficiency virus 1 infectionKEGG
hsa05205Proteoglycans in cancerKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000096433Glucose5.947e-00519060910
ENSG00000096433Platelet Function Tests2.3600000E-005-
ENSG00000096433Body Height3E-820881960
ENSG00000096433Obesity1E-619553259
ENSG00000096433Schizophrenia2E-626198764
ENSG00000096433Venous Thromboembolism5E-728203683
ENSG00000096433Graves Disease4E-1221900946
ENSG00000096433Education3E-723722424
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000096433rs4711336633691269?Height20881960[NR]EFO_0004339
ENSG00000096433rs942637633685334?Multiple sclerosis and body mass index (pleiotropy)26920376[1.0883-1.1837]EFO_0003885|EFO_0004340
ENSG00000096433rs2296342633659300ASchizophrenia26198764[NR]1.05EFO_0000692
ENSG00000096433rs3227633694518CEducational attainment23722424[NR]1.037EFO_0004784
ENSG00000096433rs999943633656956TObesity (extreme)19553259[1.20-1.56]1.37EFO_0001073
ENSG00000096433rs2229637633675781AVenous thromboembolism adjusted for sickle cell variant rs77121243-T28203683[1.325-1.9]1.587EFO_0004286
ENSG00000096433rs9394159633650385TGraves' disease21900946[1.24-1.48]1.36EFO_0004237
ENSG00000096433rs942642633687120TEducational attainment (years of education)30038396[0.0059-0.0117] unit decrease0.0088EFO_0004784
ENSG00000096433rs10807127633651665?Red blood cell count30595370EFO_0004305
ENSG00000096433rs10947428633679281?Eczema30595370HP_0000964
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000096433's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory