RNA binding proteome (RBPome)
PID | Title | Method |
Time | Author | Doi |
---|
30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & HEK293 | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & HEK293 | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & Hela | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & MCF10A | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & MCF7 | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & U2OS | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
Protein-Protein Interaction (PPI)
![](./data/PPI/Homo_sapiens/Homo_sapiens.ENSG00000099901.png)
* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl ID | Gene Symbol | Coverage | Identiy |
Ortholog | Gene Symbol | Coverage | Identiy |
Species |
---|
ENSG00000099901 | RANBP1 | 100 | 98.113 | ENSMUSG00000005732 | Ranbp1 | 98 | 94.975 | Mus_musculus |
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ENSG00000099901 | RANBP1 | 98 | 69.231 | YDR002W | YRB1 | 77 | 53.797 | Saccharomyces_cerevisiae |
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