EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
18505059	POLR2F, ATP6V0A1 and PRNP expression in colorectal cancer: new molecules with prognostic significance?	Anticancer Res	2008 Mar-Apr	Antonacopoulou AG	-

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr22	37959465	Silent	NA	A70A	0.17
BLCA	chr22	37956810	Missense_Mutation	NA	E20K	0.14
BLCA	chr22	38025630	Silent	novel	A115A	0.15
BLCA	chr22	37967200	Intron	novel		0.35
BLCA	chr22	38025975	Missense_Mutation	novel	N77D	0.49	RNA_pol_Rpb6
BLCA	chr22	37956804	Missense_Mutation	novel	E18Q	0.27
BRCA	chr22	37959461	Missense_Mutation	rs763720250	R69Q	0.38	RNA_pol_Rpb6
BRCA	chr22	38026070	Missense_Mutation	NA	K108N	0.31
BRCA	chr22	37953799	Missense_Mutation	NA	N4K	0.53
BRCA	chr22	38025659	Missense_Mutation	NA	S125Y	0.41
CESC	chr22	37956852	Intron	novel		0.15
CESC	chr22	37967163	Missense_Mutation	novel	E96K	0.09	RNA_pol_Rpb6
CESC	chr22	37956782	Silent	rs75033328	G10G	0.37
CESC	chr22	37959364	Missense_Mutation	rs759220077	E37K	0.23
CESC	chr22	37967735	3'UTR	novel		0.07
CESC	chr22	37953771	5'UTR	novel		0.25
CESC	chr22	37967791	3'UTR	novel		0.47
CHOL	chr22	38026136	Silent	novel	P130P	0.22
COAD	chr22	38025913	Missense_Mutation	NA	T54A	0.42	RNA_pol_Rpb6
COAD	chr22	37956785	Silent	rs747162109	D11D	0.35
COAD	chr22	37959371	Frame_Shift_Ins	NA	*S41Lfs76**	0.35
COAD	chr22	37959448	Missense_Mutation	rs760223334	V65M	0.25	RNA_pol_Rpb6
COAD	chr22	38025871	Missense_Mutation	novel	A42V	0.19
COAD	chr22	37956782	Silent	rs75033328	G10G	0.08
COAD	chr22	37967642	Missense_Mutation	novel	I104T	0.12
COAD	chr22	37956837	Missense_Mutation	rs771399849	E29K	0.28
COAD	chr22	38026110	Frame_Shift_Ins	novel	*T124Hfs17**	0.19
COAD	chr22	37959445	Missense_Mutation	novel	R64C	0.35	RNA_pol_Rpb6
COAD	chr22	37956893	Intron	rs771426287		0.29
GBM	chr22	37967791	3'UTR	novel		0.13
HNSC	chr22	37953809	Splice_Site	novel	X7_splice	0.28
HNSC	chr22	37956795	Missense_Mutation	novel	D15N	0.18
KIRP	chr22	37956846	Splice_Region	novel		0.41
KIRP	chr22	37953779	5'UTR	novel		0.5
KIRP	chr22	37959411	Missense_Mutation	NA	I52M	0.43	RNA_pol_Rpb6
LAML	chr22	37967737	3'UTR	novel		0.07
LIHC	chr22	37967493	Intron	novel		0.48
LIHC	chr22	38025591	Silent	novel	G102G	0.37
LIHC	chr22	37953749	5'UTR	novel		0.35
LUAD	chr22	37967740	3'UTR	novel		0.28
LUSC	chr22	38026090	Missense_Mutation	novel	P115L	0.3
LUSC	chr22	37959377	Missense_Mutation	rs775564769	S41C	0.1
LUSC	chr22	37967644	Missense_Mutation	rs774038371	I105V	0.26
PRAD	chr22	37956836	Silent	novel	A28A	0.58
SKCM	chr22	38025628	Missense_Mutation	novel	A115T	0.21
SKCM	chr22	38025909	Missense_Mutation	novel	M55V	0.24	RNA_pol_Rpb6
SKCM	chr22	37959371	Missense_Mutation	novel	L39H	0.1
SKCM	chr22	37959372	Silent	novel	L39L	0.11
SKCM	chr22	38026106	Silent	novel	P120P	0.47
SKCM	chr22	38026063	Missense_Mutation	novel	S106L	0.44
SKCM	chr22	37959363	Silent	rs771379672	V36V	0.35
STAD	chr22	38025662	Missense_Mutation	novel	R126H	0.63
STAD	chr22	37967637	Silent	NA	I102I	0.25
STAD	chr22	37956783	Missense_Mutation	rs550998177	D11N	0.26
STAD	chr22	37956785	Silent	rs747162109	D11D	0.2
STAD	chr22	37959385	Nonsense_Mutation	rs763157475	R44*	0.09
STAD	chr22	37956786	Missense_Mutation	rs774791641	D12N	0.3
UCEC	chr22	38025974	Missense_Mutation	NA	R74I	0.3	RNA_pol_Rpb6
UCEC	chr22	37967193	Intron	novel		0.42
UCEC	chr22	37967143	Missense_Mutation	novel	P89H	0.44	RNA_pol_Rpb6
UCEC	chr22	37967199	Intron	novel		0.11
UCEC	chr22	37967443	Intron	novel		0.25
UCEC	chr22	37967129	Frame_Shift_Del	novel	*E86Rfs9**	0.38	RNA_pol_Rpb6
UCEC	chr22	38025640	Missense_Mutation	novel	G119C	0.11
UCEC	chr22	37967787	3'UTR	novel		0.48
UCEC	chr22	37967662	Missense_Mutation	novel	P111T	0.15
UCEC	chr22	37967788	3'UTR	novel		0.29
UCEC	chr22	37967684	Nonsense_Mutation	NA	W118*	0.45
UCEC	chr22	37959363	Silent	rs771379672	V36V	0.43
UCEC	chr22	37967396	Intron	novel		0.54
UCEC	chr22	37959460	Nonsense_Mutation	novel	R69*	0.57	RNA_pol_Rpb6
UCEC	chr22	37967434	Intron	novel		0.2
UCEC	chr22	37967684	Frame_Shift_Del	NA	*V120Wfs159**	0.37
UCEC	chr22	37967288	Intron	novel		0.25
UCEC	chr22	37967413	Intron	novel		0.25
UCEC	chr22	37967921	3'UTR	novel		0.25
UCEC	chr22	37967726	3'UTR	novel		0.32
UCEC	chr22	37967741	3'UTR	novel		0.38
UCEC	chr22	38026099	Missense_Mutation	novel	P118L	0.22

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
PCPG	DEL	0.3272	0.044123
THCA	DEL	0.1563	0.046486
THYM	DEL	0.0732	0.063154

Survival Analysis

Cancer	P-value	Q-value
KIRC	0.0012	Kaplan-Meier Survival Analysis
PRAD	0.0068	Kaplan-Meier Survival Analysis
BRCA	0.05	Kaplan-Meier Survival Analysis
ESCA	0.003	Kaplan-Meier Survival Analysis
COAD	0.00037	Kaplan-Meier Survival Analysis
LAML	0.017	Kaplan-Meier Survival Analysis
GBM	0.028	Kaplan-Meier Survival Analysis
DLBC	0.016	Kaplan-Meier Survival Analysis
LGG	0.0001	Kaplan-Meier Survival Analysis
LUAD	0.0031	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

Literatures

Expression

Transcripts

Gene Model

Pathways

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000100142 (Gene tree)
Gene ID: 5435
Gene Symbol: POLR2F
Alias: RPB6|HRBP14.4
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 89,309 bases
Position: chr22:37,952,607-38,041,915
Accession: 9193
RBP type: canonical RBP
Summary: This gene encodes the sixth largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes. In yeast, this polymerase subunit, in combination with at least two other subunits, forms a structure that stabilizes the transcribing polymerase on the DNA template. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000475343	RNA_pol_Rpb6	PF01192.22	2.8e-15	1	1
ENSP00000475707	RNA_pol_Rpb6	PF01192.22	4.6e-15	1	1
ENSP00000403852	RNA_pol_Rpb6	PF01192.22	5e-15	1	1
ENSP00000385725	RNA_pol_Rpb6	PF01192.22	1.1e-12	1	1
ENSP00000476187	RNA_pol_Rpb6	PF01192.22	1.2e-12	1	1
ENSP00000384112	RNA_pol_Rpb6	PF01192.22	1.6e-12	1	1

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
30854058	Identification of B-cell translocation gene 1-controlled gene networks in diffuse large B-cell lymphoma: A study based on bioinformatics analysis.	Oncol Lett	2019 Mar	Yan W	doi: 10.3892/ol.2019.9900

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000333418	POLR2F-201	811	-	ENSP00000332130	145 (aa)	-	H0Y2U7
ENST00000488684	POLR2F-211	564	-	ENSP00000475342	76 (aa)	-	U3KQQ7
ENST00000470701	POLR2F-208	584	-	ENSP00000475707	122 (aa)	-	U3KQB0
ENST00000443002	POLR2F-206	1890	XM_017028832	ENSP00000406826	111 (aa)	XP_016884321	F8WC47
ENST00000405557	POLR2F-202	560	-	ENSP00000384112	126 (aa)	-	B0QYL8
ENST00000460648	POLR2F-207	518	-	ENSP00000475257	74 (aa)	-	U3KPV3
ENST00000484894	POLR2F-210	551	-	-	- (aa)	-	-
ENST00000608713	POLR2F-214	1612	-	-	- (aa)	-	-
ENST00000606538	POLR2F-213	760	-	ENSP00000476187	98 (aa)	-	U3KQS8
ENST00000492213	POLR2F-212	550	-	ENSP00000475343	112 (aa)	-	U3KPY1
ENST00000483713	POLR2F-209	615	-	ENSP00000476132	76 (aa)	-	U3KQQ7
ENST00000442738	POLR2F-205	2106	-	ENSP00000403852	127 (aa)	-	P61218
ENST00000407936	POLR2F-203	582	-	ENSP00000385725	158 (aa)	-	B0QYL9
ENST00000427034	POLR2F-204	883	-	ENSP00000389307	93 (aa)	-	H0Y439

Gene Model

Click here to download ENSG00000100142's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03020	RNA polymerase	KEGG
hsa04623	Cytosolic DNA-sensing pathway	KEGG
hsa05016	Huntington disease	KEGG

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000100142	rs11912649	22	38019535	?	Macular thickness	30535121	[0.25-0.53] unit decrease	0.39	EFO_0008375
ENSG00000100142	rs9610884	22	37955678	?	Heel bone mineral density	30595370			EFO_0009270
ENSG00000100142	rs139896	22	38001790	C	Smoking initiation (ever regular vs never regular) (MTAG)	30643251	[0.0052-0.0096] unit increase	0.00739974	EFO_0006527
ENSG00000100142	rs139896	22	38001790	C	Smoking initiation (ever regular vs never regular)	30643251	[0.01-0.021] unit increase	0.015440351	EFO_0006527

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000100142's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000100142	POLR2F	100	88.976	ENSAPOG00000002902	polr2f	100	88.976	Acanthochromis_polyacanthus
ENSG00000100142	POLR2F	100	99.213	ENSAMEG00000010331	POLR2F	100	99.213	Ailuropoda_melanoleuca
ENSG00000100142	POLR2F	100	88.976	ENSACIG00000000923	polr2f	100	88.976	Amphilophus_citrinellus
ENSG00000100142	POLR2F	100	89.764	ENSAOCG00000003182	polr2f	100	89.764	Amphiprion_ocellaris
ENSG00000100142	POLR2F	100	89.764	ENSAPEG00000012999	polr2f	100	89.764	Amphiprion_percula
ENSG00000100142	POLR2F	100	88.976	ENSATEG00000008929	polr2f	100	88.976	Anabas_testudineus
ENSG00000100142	POLR2F	98	97.500	ENSAPLG00000015235	POLR2F	96	97.500	Anas_platyrhynchos
ENSG00000100142	POLR2F	100	99.213	ENSACAG00000015288	POLR2F	100	99.213	Anolis_carolinensis
ENSG00000100142	POLR2F	100	100.000	ENSANAG00000020840	POLR2F	100	100.000	Aotus_nancymaae
ENSG00000100142	POLR2F	100	89.764	ENSACLG00000016129	polr2f	100	89.764	Astatotilapia_calliptera
ENSG00000100142	POLR2F	100	89.796	ENSAMXG00000012812	polr2f	100	89.764	Astyanax_mexicanus
ENSG00000100142	POLR2F	100	100.000	ENSBTAG00000004820	POLR2F	100	100.000	Bos_taurus
ENSG00000100142	POLR2F	66	81.081	WBGene00007355	rpb-6	68	70.213	Caenorhabditis_elegans
ENSG00000100142	POLR2F	100	100.000	ENSCJAG00000048241	POLR2F	100	100.000	Callithrix_jacchus
ENSG00000100142	POLR2F	100	99.213	ENSCAFG00000001437	POLR2F	100	99.213	Canis_familiaris
ENSG00000100142	POLR2F	100	99.180	ENSCHIG00000012907	POLR2F	96	99.180	Capra_hircus
ENSG00000100142	POLR2F	100	99.213	ENSTSYG00000008187	POLR2F	100	99.213	Carlito_syrichta
ENSG00000100142	POLR2F	98	100.000	ENSCAPG00000013419	POLR2F	94	100.000	Cavia_aperea
ENSG00000100142	POLR2F	100	100.000	ENSCPOG00000034094	POLR2F	100	100.000	Cavia_porcellus
ENSG00000100142	POLR2F	100	100.000	ENSCCAG00000036489	POLR2F	100	100.000	Cebus_capucinus
ENSG00000100142	POLR2F	100	100.000	ENSCATG00000041014	POLR2F	100	100.000	Cercocebus_atys
ENSG00000100142	POLR2F	100	100.000	ENSCLAG00000017167	POLR2F	100	100.000	Chinchilla_lanigera
ENSG00000100142	POLR2F	100	100.000	ENSCSAG00000006862	POLR2F	100	100.000	Chlorocebus_sabaeus
ENSG00000100142	POLR2F	100	98.980	ENSCPBG00000023030	POLR2F	62	98.347	Chrysemys_picta_bellii
ENSG00000100142	POLR2F	81	78.261	ENSCING00000019359	-	73	75.000	Ciona_intestinalis
ENSG00000100142	POLR2F	100	100.000	ENSCANG00000041884	POLR2F	100	100.000	Colobus_angolensis_palliatus
ENSG00000100142	POLR2F	100	100.000	ENSCGRG00001023541	POLR2F	100	100.000	Cricetulus_griseus_chok1gshd
ENSG00000100142	POLR2F	100	100.000	ENSCGRG00000011921	POLR2F	100	100.000	Cricetulus_griseus_crigri
ENSG00000100142	POLR2F	87	90.566	ENSCSEG00000006848	polr2f	83	90.566	Cynoglossus_semilaevis
ENSG00000100142	POLR2F	100	88.189	ENSCVAG00000010437	polr2f	100	88.189	Cyprinodon_variegatus
ENSG00000100142	POLR2F	100	87.402	ENSDARG00000036625	polr2f	100	87.402	Danio_rerio
ENSG00000100142	POLR2F	100	100.000	ENSDNOG00000005884	POLR2F	100	100.000	Dasypus_novemcinctus
ENSG00000100142	POLR2F	100	100.000	ENSDORG00000024789	Polr2f	100	100.000	Dipodomys_ordii
ENSG00000100142	POLR2F	83	72.115	FBgn0003275	RpII18	79	72.115	Drosophila_melanogaster
ENSG00000100142	POLR2F	69	80.882	ENSEBUG00000008509	polr2f	90	67.816	Eptatretus_burgeri
ENSG00000100142	POLR2F	77	70.930	ENSEBUG00000002842	-	90	64.078	Eptatretus_burgeri
ENSG00000100142	POLR2F	95	96.190	ENSEASG00005018802	-	95	96.190	Equus_asinus_asinus
ENSG00000100142	POLR2F	100	97.638	ENSEEUG00000011014	POLR2F	100	97.638	Erinaceus_europaeus
ENSG00000100142	POLR2F	100	87.402	ENSELUG00000000319	polr2f	100	87.402	Esox_lucius
ENSG00000100142	POLR2F	100	99.213	ENSFCAG00000002806	POLR2F	100	99.213	Felis_catus
ENSG00000100142	POLR2F	100	100.000	ENSFDAG00000009926	POLR2F	100	100.000	Fukomys_damarensis
ENSG00000100142	POLR2F	92	88.393	ENSFHEG00000005448	polr2f	84	88.679	Fundulus_heteroclitus
ENSG00000100142	POLR2F	100	83.465	ENSGMOG00000009967	polr2f	100	83.465	Gadus_morhua
ENSG00000100142	POLR2F	100	97.638	ENSGALG00000012291	POLR2F	100	97.638	Gallus_gallus
ENSG00000100142	POLR2F	100	87.755	ENSGAFG00000017573	polr2f	100	87.402	Gambusia_affinis
ENSG00000100142	POLR2F	100	85.039	ENSGACG00000007322	polr2f	100	85.039	Gasterosteus_aculeatus
ENSG00000100142	POLR2F	100	99.213	ENSGAGG00000021757	POLR2F	100	99.213	Gopherus_agassizii
ENSG00000100142	POLR2F	100	100.000	ENSGGOG00000005213	POLR2F	100	100.000	Gorilla_gorilla
ENSG00000100142	POLR2F	100	89.764	ENSHBUG00000022089	polr2f	100	89.764	Haplochromis_burtoni
ENSG00000100142	POLR2F	100	100.000	ENSHGLG00000018942	POLR2F	100	100.000	Heterocephalus_glaber_female
ENSG00000100142	POLR2F	100	100.000	ENSHGLG00100012851	POLR2F	100	100.000	Heterocephalus_glaber_male
ENSG00000100142	POLR2F	100	87.755	ENSHCOG00000006149	polr2f	100	86.614	Hippocampus_comes
ENSG00000100142	POLR2F	81	91.209	ENSIPUG00000000814	polr2f	100	91.753	Ictalurus_punctatus
ENSG00000100142	POLR2F	100	100.000	ENSSTOG00000025722	POLR2F	100	100.000	Ictidomys_tridecemlineatus
ENSG00000100142	POLR2F	100	100.000	ENSJJAG00000008097	Polr2f	100	100.000	Jaculus_jaculus
ENSG00000100142	POLR2F	100	90.551	ENSKMAG00000014230	polr2f	100	90.551	Kryptolebias_marmoratus
ENSG00000100142	POLR2F	87	89.623	ENSLBEG00000008383	polr2f	88	89.623	Labrus_bergylta
ENSG00000100142	POLR2F	100	94.488	ENSLACG00000003931	POLR2F	100	94.488	Latimeria_chalumnae
ENSG00000100142	POLR2F	100	88.462	ENSLOCG00000011827	polr2f	100	88.462	Lepisosteus_oculatus
ENSG00000100142	POLR2F	100	100.000	ENSLAFG00000012632	POLR2F	100	100.000	Loxodonta_africana
ENSG00000100142	POLR2F	100	100.000	ENSMFAG00000033687	POLR2F	100	100.000	Macaca_fascicularis
ENSG00000100142	POLR2F	100	100.000	ENSMMUG00000038231	POLR2F	100	99.180	Macaca_mulatta
ENSG00000100142	POLR2F	100	100.000	ENSMNEG00000044365	POLR2F	100	100.000	Macaca_nemestrina
ENSG00000100142	POLR2F	100	100.000	ENSMLEG00000033077	POLR2F	100	100.000	Mandrillus_leucophaeus
ENSG00000100142	POLR2F	100	89.764	ENSMAMG00000008056	polr2f	100	89.764	Mastacembelus_armatus
ENSG00000100142	POLR2F	100	89.764	ENSMZEG00005005705	polr2f	100	89.764	Maylandia_zebra
ENSG00000100142	POLR2F	100	97.638	ENSMGAG00000012504	POLR2F	100	97.638	Meleagris_gallopavo
ENSG00000100142	POLR2F	100	100.000	ENSMAUG00000018586	Polr2f	100	100.000	Mesocricetus_auratus
ENSG00000100142	POLR2F	100	100.000	ENSMICG00000013128	POLR2F	100	100.000	Microcebus_murinus
ENSG00000100142	POLR2F	100	100.000	ENSMOCG00000000237	Polr2f	100	100.000	Microtus_ochrogaster
ENSG00000100142	POLR2F	100	89.764	ENSMMOG00000005106	polr2f	100	89.764	Mola_mola
ENSG00000100142	POLR2F	100	97.638	ENSMODG00000019063	POLR2F	100	97.638	Monodelphis_domestica
ENSG00000100142	POLR2F	100	88.976	ENSMALG00000001444	polr2f	100	88.976	Monopterus_albus
ENSG00000100142	POLR2F	100	100.000	MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	Mus_caroli
ENSG00000100142	POLR2F	100	100.000	ENSMUSG00000033020	Polr2f	100	100.000	Mus_musculus
ENSG00000100142	POLR2F	100	100.000	MGP_PahariEiJ_G0020008	Polr2f	100	99.213	Mus_pahari
ENSG00000100142	POLR2F	100	100.000	MGP_SPRETEiJ_G0020904	Polr2f	100	99.213	Mus_spretus
ENSG00000100142	POLR2F	100	99.213	ENSMPUG00000012997	POLR2F	100	99.213	Mustela_putorius_furo
ENSG00000100142	POLR2F	99	100.000	ENSMLUG00000014315	-	100	97.674	Myotis_lucifugus
ENSG00000100142	POLR2F	100	90.816	ENSMLUG00000029612	-	98	92.742	Myotis_lucifugus
ENSG00000100142	POLR2F	100	100.000	ENSNGAG00000020682	Polr2f	100	100.000	Nannospalax_galili
ENSG00000100142	POLR2F	100	88.976	ENSNBRG00000002492	polr2f	100	88.976	Neolamprologus_brichardi
ENSG00000100142	POLR2F	100	100.000	ENSNLEG00000014987	-	100	100.000	Nomascus_leucogenys
ENSG00000100142	POLR2F	100	100.000	ENSODEG00000014123	POLR2F	100	100.000	Octodon_degus
ENSG00000100142	POLR2F	100	88.976	ENSONIG00000008394	polr2f	100	88.976	Oreochromis_niloticus
ENSG00000100142	POLR2F	100	99.213	ENSOANG00000014684	POLR2F	100	99.213	Ornithorhynchus_anatinus
ENSG00000100142	POLR2F	100	100.000	ENSOCUG00000012064	POLR2F	100	100.000	Oryctolagus_cuniculus
ENSG00000100142	POLR2F	100	87.402	ENSORLG00000014580	polr2f	100	87.402	Oryzias_latipes
ENSG00000100142	POLR2F	100	88.189	ENSORLG00020006910	polr2f	100	88.189	Oryzias_latipes_hni
ENSG00000100142	POLR2F	100	86.735	ENSORLG00015015332	polr2f	77	85.965	Oryzias_latipes_hsok
ENSG00000100142	POLR2F	100	87.755	ENSOMEG00000006530	polr2f	72	74.380	Oryzias_melastigma
ENSG00000100142	POLR2F	100	100.000	ENSOGAG00000025463	POLR2F	100	100.000	Otolemur_garnettii
ENSG00000100142	POLR2F	100	100.000	ENSOARG00000014692	POLR2F	100	100.000	Ovis_aries
ENSG00000100142	POLR2F	100	100.000	ENSPPAG00000024276	POLR2F	100	100.000	Pan_paniscus
ENSG00000100142	POLR2F	100	99.213	ENSPPRG00000013030	POLR2F	100	99.213	Panthera_pardus
ENSG00000100142	POLR2F	100	95.082	ENSPTIG00000000632	POLR2F	99	96.694	Panthera_tigris_altaica
ENSG00000100142	POLR2F	100	100.000	ENSPTRG00000014356	POLR2F	100	100.000	Pan_troglodytes
ENSG00000100142	POLR2F	100	100.000	ENSPANG00000023979	POLR2F	100	100.000	Papio_anubis
ENSG00000100142	POLR2F	100	89.796	ENSPKIG00000002464	polr2f	100	89.764	Paramormyrops_kingsleyae
ENSG00000100142	POLR2F	58	100.000	ENSPSIG00000013913	POLR2F	100	100.000	Pelodiscus_sinensis
ENSG00000100142	POLR2F	100	89.764	ENSPMGG00000009619	polr2f	100	89.764	Periophthalmus_magnuspinnatus
ENSG00000100142	POLR2F	100	100.000	ENSPEMG00000008322	Polr2f	100	100.000	Peromyscus_maniculatus_bairdii
ENSG00000100142	POLR2F	100	97.638	ENSPCIG00000012000	-	100	97.638	Phascolarctos_cinereus
ENSG00000100142	POLR2F	100	88.189	ENSPFOG00000000139	polr2f	100	88.189	Poecilia_formosa
ENSG00000100142	POLR2F	100	88.189	ENSPLAG00000000988	polr2f	100	88.189	Poecilia_latipinna
ENSG00000100142	POLR2F	100	88.189	ENSPMEG00000019063	polr2f	100	88.189	Poecilia_mexicana
ENSG00000100142	POLR2F	100	87.755	ENSPREG00000016749	polr2f	100	87.755	Poecilia_reticulata
ENSG00000100142	POLR2F	100	100.000	ENSPPYG00000011809	POLR2F	100	100.000	Pongo_abelii
ENSG00000100142	POLR2F	100	100.000	ENSPCOG00000025716	POLR2F	100	100.000	Propithecus_coquereli
ENSG00000100142	POLR2F	99	100.000	ENSPVAG00000010107	POLR2F	92	92.517	Pteropus_vampyrus
ENSG00000100142	POLR2F	100	89.764	ENSPNYG00000019790	polr2f	100	89.764	Pundamilia_nyererei
ENSG00000100142	POLR2F	100	90.551	ENSPNAG00000009017	polr2f	100	90.551	Pygocentrus_nattereri
ENSG00000100142	POLR2F	100	100.000	ENSRNOG00000011214	Polr2f	100	99.213	Rattus_norvegicus
ENSG00000100142	POLR2F	100	100.000	ENSRBIG00000044878	POLR2F	100	100.000	Rhinopithecus_bieti
ENSG00000100142	POLR2F	100	100.000	ENSRROG00000019586	POLR2F	100	100.000	Rhinopithecus_roxellana
ENSG00000100142	POLR2F	100	100.000	ENSSBOG00000023340	POLR2F	100	100.000	Saimiri_boliviensis_boliviensis
ENSG00000100142	POLR2F	100	97.638	ENSSHAG00000008502	POLR2F	100	97.638	Sarcophilus_harrisii
ENSG00000100142	POLR2F	100	90.551	ENSSFOG00015012810	polr2f	100	90.551	Scleropages_formosus
ENSG00000100142	POLR2F	100	88.976	ENSSMAG00000005354	polr2f	100	88.976	Scophthalmus_maximus
ENSG00000100142	POLR2F	100	89.764	ENSSDUG00000016273	polr2f	100	89.764	Seriola_dumerili
ENSG00000100142	POLR2F	100	89.764	ENSSLDG00000024895	polr2f	100	89.764	Seriola_lalandi_dorsalis
ENSG00000100142	POLR2F	100	99.213	ENSSPUG00000011343	POLR2F	100	99.213	Sphenodon_punctatus
ENSG00000100142	POLR2F	100	89.764	ENSSPAG00000019646	polr2f	100	89.764	Stegastes_partitus
ENSG00000100142	POLR2F	100	100.000	ENSSSCG00000000116	POLR2F	100	99.213	Sus_scrofa
ENSG00000100142	POLR2F	100	98.425	ENSTGUG00000010476	POLR2F	93	98.425	Taeniopygia_guttata
ENSG00000100142	POLR2F	90	97.727	ENSTGUG00000016504	-	100	97.727	Taeniopygia_guttata
ENSG00000100142	POLR2F	100	88.976	ENSTRUG00000021130	polr2f	71	88.976	Takifugu_rubripes
ENSG00000100142	POLR2F	100	89.764	ENSTNIG00000010827	polr2f	100	89.764	Tetraodon_nigroviridis
ENSG00000100142	POLR2F	99	100.000	ENSTTRG00000004817	POLR2F	92	92.517	Tursiops_truncatus
ENSG00000100142	POLR2F	100	99.213	ENSUAMG00000020504	POLR2F	100	99.213	Ursus_americanus
ENSG00000100142	POLR2F	100	99.213	ENSUMAG00000015052	POLR2F	100	99.213	Ursus_maritimus
ENSG00000100142	POLR2F	99	99.174	ENSVVUG00000024021	POLR2F	92	99.174	Vulpes_vulpes
ENSG00000100142	POLR2F	100	94.488	ENSXETG00000006346	polr2f	100	94.488	Xenopus_tropicalis
ENSG00000100142	POLR2F	100	88.189	ENSXCOG00000015983	polr2f	100	88.189	Xiphophorus_couchianus
ENSG00000100142	POLR2F	100	88.189	ENSXMAG00000001559	polr2f	100	88.189	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	TAS	Process
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0001055	RNA polymerase II activity	21873635.	IBA	Function
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0001650	fibrillar center	-	IDA	Component
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0005634	nucleus	9852112.	IDA	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005665	RNA polymerase II, core complex	9852112.	IDA	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0005829	cytosol	-	TAS	Component
GO:0006283	transcription-coupled nucleotide-excision repair	-	TAS	Process
GO:0006351	transcription, DNA-templated	-	TAS	Process
GO:0006361	transcription initiation from RNA polymerase I promoter	-	TAS	Process
GO:0006362	transcription elongation from RNA polymerase I promoter	-	TAS	Process
GO:0006363	termination of RNA polymerase I transcription	-	TAS	Process
GO:0006366	transcription by RNA polymerase II	9852112.	IDA	Process
GO:0006366	transcription by RNA polymerase II	-	TAS	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	-	TAS	Process
GO:0006368	transcription elongation from RNA polymerase II promoter	-	TAS	Process
GO:0006370	7-methylguanosine mRNA capping	-	TAS	Process
GO:0006383	transcription by RNA polymerase III	-	IEA	Process
GO:0008543	fibroblast growth factor receptor signaling pathway	-	TAS	Process
GO:0016070	RNA metabolic process	-	TAS	Process
GO:0032481	positive regulation of type I interferon production	-	TAS	Process
GO:0035019	somatic stem cell population maintenance	-	TAS	Process
GO:0042795	snRNA transcription by RNA polymerase II	-	TAS	Process
GO:0045815	positive regulation of gene expression, epigenetic	-	TAS	Process
GO:0050434	positive regulation of viral transcription	-	TAS	Process
GO:0060964	regulation of gene silencing by miRNA	-	TAS	Process

EuRBPDB

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

Literatures

Expression

Transcripts

Gene Model

Pathways

GWAS

PPI

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.