EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
23149937RBFOX2 is an important regulator of mesenchymal tissue-specific splicing in both normal and cancer tissues.Mol Cell Biol2013 JanVenables JPdoi: 10.1128/MCB.01174-12
23143756Associations of polymorphisms in the genes of FGFR2, FGF1, and RBFOX2 with breast cancer risk by estrogen/progesterone receptor status.Mol Carcinog2013 NovCen YLdoi: 10.1002/mc.21979
27001519Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer.Nucleic Acids Res2016 May 19Chen Ydoi: 10.1093/nar/gkw177
27911856Splicing factor ratio as an index of epithelial-mesenchymal transition and tumor aggressiveness in breast cancer.Oncotarget2017 Jan 10Fici Pdoi: 10.18632/oncotarget.13682.

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr2235768260Silentrs754807298I251I0.44
BLCAchr2235745929Silentrs749041051G435G0.07
BLCAchr2235761259Missense_MutationnovelD303H0.05
BRCAchr22357389063'UTRrs5614474640.4
BRCAchr2235809808Missense_MutationNAS145L0.2Fox-1_C
BRCAchr2235761202Missense_MutationNAS322G0.18
CESCchr2235759924Missense_MutationNAR358Q0.14
CESCchr2235781636SilentnovelF191F0.21
CESCchr22357390323'UTRnovel0.44
CESCchr22357425033'Flanknovel0.11
CESCchr22357438563'Flanknovel0.63
COADchr2235768290SilentnovelL241L0.18
COADchr22357440683'Flanknovel0.19
COADchr2235759979Missense_MutationNAA340T0.35
COADchr2235777984Intronnovel0.19
COADchr2235768312Missense_MutationnovelA234V0.73
COADchr2235781698Missense_MutationnovelS171R0.1
COADchr22357441953'FlankNA0.29
COADchr2235777905Intronnovel0.38
COADchr2235809950Missense_MutationnovelI98F0.03
COADchr2235746475Splice_Regionrs368460878D412D0.2
COADchr2235809974Missense_Mutationrs140420879A90T0.22
ESCAchr22357388563'UTRnovel0.28
GBMchr2235745973Missense_Mutationrs771797500D421N0.18
GBMchr2235781666Silentrs200137291P181P0.38
HNSCchr2235746495Missense_Mutationrs770778072A406T0.17
KICHchr2235938894Missense_MutationnovelE64K0.14
KIRPchr2235809960SilentNAP94P0.43
LAMLchr2235938857Missense_Mutationrs562357805R76Q0.12
LIHCchr2235768328Missense_MutationNAE229K0.1
LUADchr2235778039In_Frame_DelnovelV211_N216del0.07
LUADchr2235809914Missense_MutationnovelT110S0.2
LUADchr2235759912Missense_MutationnovelP362L0.42
LUADchr2235938862SilentnovelP74P0.61
LUADchr2235781657SilentNAL184L0.24
LUSCchr2235760018Missense_MutationnovelP327S0.07
LUSCchr2235778009Intronnovel0.23
LUSCchr2235744233Missense_MutationnovelG443A0.25
LUSCchr2235759889Missense_MutationNAG370C0.37
LUSCchr2235840343Intronrs7601893180.25
LUSCchr2235768305Missense_MutationNAR236S0.28
LUSCchr2235840273Intronnovel0.26
OVchr22357395323'Flanknovel0.67
OVchr2235750429Intronnovel0.37
OVchr2235778019Splice_Regionnovel0.08
OVchr22357440813'Flanknovel0.06
PRADchr2235746475Splice_Regionrs368460878D412D0.45
PRADchr2235750448Intronnovel0.13
READchr2235809828Silentrs750871473H138H0.41
READchr2235768326SilentnovelE229E0.43
READchr22357391193'UTRrs7757331910.5
SARCchr2235809850Missense_MutationnovelL131P0.38Fox-1_C
SKCMchr2235777913Intronnovel0.53
SKCMchr2235809917Missense_MutationnovelP109S0.23
SKCMchr2235778002Intronnovel0.26
SKCMchr2235750444Intronnovel0.29
SKCMchr2235781635Missense_Mutationrs763038015R192C0.25
SKCMchr2235744214SilentNAA449A0.13
SKCMchr2235809848Missense_MutationNAY132D0.22Fox-1_C
SKCMchr22357441723'Flanknovel0.23
SKCMchr2235840236Intronnovel0.45
STADchr2235809974Missense_Mutationrs140420879A90T0.11
STADchr22357441983'Flankrs3718443930.22
STADchr2235840291IntronNA0.42
STADchr2235809838Missense_Mutationrs779107559T135M0.4Fox-1_C
STADchr2235840291IntronNA0.43
STADchr2235744226SilentNAY445Y0.13
STADchr2235761422SilentnovelL288L0.15
STADchr2235840272Intronnovel0.22
THCAchr2235761215Nonsense_MutationnovelY317*0.11
UCECchr2235761459Missense_MutationNAL276S0.3
UCECchr2235809787Missense_MutationNAS152Y0.28Fox-1_C
UCECchr2235840341Intronnovel0.29
UCECchr22357415563'Flanknovel0.31
UCECchr22357388843'UTRnovel0.09
UCECchr22357394503'Flanknovel0.4
UCECchr22357404593'Flanknovel0.54
UCECchr22357440673'Flanknovel0.3
UCECchr2235768328Missense_MutationNAE229K0.45
UCECchr2235768260Silentrs754807298I251I0.16
UCECchr2235840278Intronnovel0.12
UCECchr2235759987Missense_MutationnovelT337M0.37
UCECchr2235745948Missense_MutationNAA429V0.52
UCECchr2235745966Missense_MutationNAY423F0.13
UCECchr2235759979Missense_MutationNAA340T0.17
UCECchr2235756129Silentrs779612165D375D0.29
UCECchr22357388243'UTRnovel0.44
UCECchr2235781697Missense_MutationnovelS171N0.39
UCECchr22357390943'UTRnovel0.31
UCECchr22357405943'Flanknovel0.23
UCECchr22357391713'UTRnovel0.31
UCECchr2235746516Missense_Mutationrs762015963A399T0.43
UCECchr2235840223Intronnovel0.42
UCECchr22357439553'Flanknovel0.29
UCECchr22357389893'UTRnovel0.35
UCECchr22357391473'UTRrs5480278790.32
UCECchr22357399213'Flanknovel0.44
UCECchr22357398523'Flanknovel0.42
UCECchr2235761441Missense_MutationnovelA282V0.47
UCECchr2235809991Missense_Mutationrs150388915P84L0.38
UCECchr22357396623'Flanknovel0.32
UCECchr22357402073'Flanknovel0.67
UCECchr22357403553'Flanknovel0.32
UCECchr2235750423Intronnovel0.46
UCECchr2235809785Missense_MutationnovelL153I0.06Fox-1_C
UCECchr2235768268Missense_MutationNAR249C0.38
UCECchr2235768260Silentrs754807298I251I0.26
UCECchr22357397233'Flanknovel0.25
UCECchr22357400173'Flanknovel0.23
UCECchr22357404593'Flanknovel0.31
UCECchr22357430073'Flanknovel0.18
UCECchr2235745933Missense_MutationnovelV434A0.15
UCECchr22357424953'Flanknovel0.43
UCECchr22357403643'Flanknovel0.23
UCECchr22357440923'Flanknovel0.17
UCECchr22357404593'Flanknovel0.29
UCECchr22357440963'Flanknovel0.2
UCECchr2235809977Missense_MutationNAD89N0.42
UCECchr22357388753'UTRnovel0.38
UCECchr22357392293'Flanknovel0.44
UCECchr2235759946Missense_MutationNAR351W0.4
UCECchr22357388693'UTRnovel0.4
UCECchr22357414853'Flankrs7620627480.3
UCECchr22357403573'Flanknovel0.59
UCECchr22357440553'Flanknovel0.29
UCECchr2235777989Intronnovel0.38
UCECchr22357416253'Flanknovel0.33
UCECchr22357438653'Flanknovel0.49
UCECchr22357440043'Flanknovel0.3
UCECchr2235809876SilentNAG122G0.32
UCECchr2235765465Missense_MutationNAR259C0.31
UCECchr2235781629Missense_MutationNAR194W0.09
UCECchr2235840193IntronNA0.11
UCECchr22357424683'Flanknovel0.44
UCECchr2235781724Missense_MutationNAT162I0.23Fox-1_C
UCECchr22357423153'Flanknovel0.38
UCECchr22357391323'UTRnovel0.56
UCECchr2235759987Missense_MutationnovelT337M0.49
UCECchr22357405023'Flanknovel0.16

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
PCPGDEL0.31480.044123
THCADEL0.15630.046486
THYMDEL0.08130.063154

Survival Analysis
CancerP-value Q-value
KIRC0.011

Kaplan-Meier Survival Analysis

STAD0.016

Kaplan-Meier Survival Analysis

MESO0.019

Kaplan-Meier Survival Analysis

ACC0.00062

Kaplan-Meier Survival Analysis

UCS0.0011

Kaplan-Meier Survival Analysis

ESCA0.00033

Kaplan-Meier Survival Analysis

READ0.027

Kaplan-Meier Survival Analysis

LAML0.02

Kaplan-Meier Survival Analysis

KICH0.029

Kaplan-Meier Survival Analysis

LGG0.0056

Kaplan-Meier Survival Analysis

UVM0.0019

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • PRI
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000100320 (Gene tree)
Gene ID
23543
Gene Symbol
RBFOX2
Alias
HNRBP2|FOX-2|HRNBP2|RBM9
Full Name
RNA binding fox-1 homolog 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
290,157 bases
Position
chr22:35,738,736-36,028,892
Accession
9906
RBP type
canonical RBP
Summary
This gene is one of several human genes similar to the C. elegans gene Fox-1. This gene encodes an RNA binding protein that is thought to be a key regulator of alternative exon splicing in the nervous system and other cell types. The protein binds to a conserved UGCAUG element found downstream of many alternatively spliced exons and promotes inclusion of the alternative exon in mature transcripts. The protein also interacts with the estrogen receptor 1 transcription factor and regulates estrogen receptor 1 transcriptional activity. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000380470Fox-1_CPF12414.83.8e-4111
ENSP00000262829Fox-1_CPF12414.83.8e-4111
ENSP00000391670Fox-1_CPF12414.83.9e-4111
ENSP00000405651Fox-1_CPF12414.84.2e-4111
ENSP00000413035Fox-1_CPF12414.85.3e-4111
ENSP00000474464Fox-1_CPF12414.81.2e-3711
ENSP00000352328Fox-1_CPF12414.82.6e-2611
ENSP00000407855Fox-1_CPF12414.81.1e-1911
ENSP00000384944Fox-1_CPF12414.81.3e-1911
ENSP00000475142RRM_1PF00076.226e-1811
ENSP00000384944RRM_1PF00076.221.1e-1711
ENSP00000407855RRM_1PF00076.221.1e-1711
ENSP00000352328RRM_1PF00076.221.3e-1711
ENSP00000380470RRM_1PF00076.221.8e-1711
ENSP00000405651RRM_1PF00076.222e-1711
ENSP00000391670RRM_1PF00076.222e-1711
ENSP00000413035RRM_1PF00076.222.6e-1711
ENSP00000386177RRM_1PF00076.222.1e-1611
ENSP00000474464RRM_1PF00076.225e-0911
ENSP00000262829RRM_1PF00076.223.7e-0711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Click here to download all RNA binding sites

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
25110022RBFOX2 protein domains and cellular activities.Biochem Soc Trans2014 AugArya ADdoi: 10.1042/BST20140050.
29186814Alternative Splicing of L-type CaV1.2 Calcium Channels: Implications in Cardiovascular Diseases.Genes (Basel)2017 Nov 24Hu Zdoi: 10.3390/genes8120344.
22577521Computational prediction of protein-protein interactions of human tyrosinase.Enzyme Res2012Wang SFdoi: 10.1155/2012/192867
18691435Constructing disease-specific gene networks using pair-wise relevance metric: application to colon cancer identifies interleukin 8, desmin and enolase 1 as the central elements.BMC Syst Biol2008 Aug 10Jiang Wdoi: 10.1186/1752-0509-2-72.
18177378Xenopus Rbm9 is a novel interactor of XGld2 in the cytoplasmic polyadenylation complex.FEBS J2008 FebPapin Cdoi: 10.1111/j.1742-4658.2007.06216.x
20645658High-throughput integrated analyses for the tyrosinase-induced melanogenesis: microarray, proteomics and interactomics studies.J Biomol Struct Dyn2010 OctLu ZR-
29981323Alternative RNA splicing associated with axon regeneration after rat peripheral nerve injury.Exp Neurol2018 OctMao Sdoi: 10.1016/j.expneurol.2018.07.003
31128090Alternative splicing induces cytoplasmic localization of RBFOX2 protein in calcific tendinopathy.Exp Mol Pathol2019 AugCho Ndoi: 10.1016/j.yexmp.2019.104264
11875103A negative coregulator for the human ER.Mol Endocrinol2002 MarNorris JD-
20131247Fox-2 protein regulates the alternative splicing of scleroderma-associated lysyl hydroxylase 2 messenger RNA.Arthritis Rheum2010 AprSeth Pdoi: 10.1002/art.27315.
24837674RNA Bind-n-Seq: quantitative assessment of the sequence and structural binding specificity of RNA binding proteins.Mol Cell2014 Jun 5Lambert Ndoi: 10.1016/j.molcel.2014.04.016
19448617Cancer-associated regulation of alternative splicing.Nat Struct Mol Biol2009 JunVenables JPdoi: 10.1038/nsmb.1608
29170129Rbfox family proteins make the homo- and hetero-oligomeric complexes.Biochem Biophys Res Commun2018 Jan 1Choi Sdoi: 10.1016/j.bbrc.2017.11.128
20042473Autoregulation of Fox protein expression to produce dominant negative splicing factors.RNA2010 FebDamianov Adoi: 10.1261/rna.1838210
23143756Associations of polymorphisms in the genes of FGFR2, FGF1, and RBFOX2 with breast cancer risk by estrogen/progesterone receptor status.Mol Carcinog2013 NovCen YLdoi: 10.1002/mc.21979
25087874Rbfox2-coordinated alternative splicing of Mef2d and Rock2 controls myoblast fusion during myogenesis.Mol Cell2014 Aug 21Singh RKdoi: 10.1016/j.molcel.2014.06.035
24658850RNA-binding proteins in neurological diseases.Sci China Life Sci2014 AprZhou H-
24637117Rbfox2 controls autoregulation in RNA-binding protein networks.Genes Dev2014 Mar 15Jangi Mdoi: 10.1101/gad.235770.113.
24151077Reactivation of fetal splicing programs in diabetic hearts is mediated by protein kinase C signaling.J Biol Chem2013 Dec 6Verma SKdoi: 10.1074/jbc.M113.507426
23435423The RNA-binding protein Rbfox2: an essential regulator of EMT-driven alternative splicing and a mediator of cellular invasion.Oncogene2014 Feb 27Braeutigam Cdoi: 10.1038/onc.2013.50
27239029Dysregulation of RBFOX2 Is an Early Event in Cardiac Pathogenesis of Diabetes.Cell Rep2016 Jun 7Nutter CAdoi: 10.1016/j.celrep.2016.05.002
27485310Rbfox2 function in RNA metabolism is impaired in hypoplastic left heart syndrome patient hearts.Sci Rep2016 Aug 3Verma SKdoi: 10.1038/srep30896.
28279710Satellite-like cells contribute to pax7-dependent skeletal muscle repair in adult zebrafish.Dev Biol2017 Apr 15Berberoglu MAdoi: 10.1016/j.ydbio.2017.03.004
26251513In vivo assessment of contractile strength distinguishes differential gene function in skeletal muscle of zebrafish larvae.J Appl Physiol (1985)2015 Oct 1Martin BLdoi: 10.1152/japplphysiol.00447.2015
26058814Alternative splicing of the cell fate determinant Numb in hepatocellular carcinoma.Hepatology2015 OctLu Ydoi: 10.1002/hep.27923
25921069Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors.Mol Cell2015 Jun 4Misra Adoi: 10.1016/j.molcel.2015.03.016
27871485Unusual Processing Generates SPA LncRNAs that Sequester Multiple RNA Binding Proteins.Mol Cell2016 Nov 3Wu Hdoi: 10.1016/j.molcel.2016.10.007
29067356Cell-Specific RNA Binding Protein Rbfox2 Regulates CaV2.2 mRNA Exon Composition and CaV2.2 Current Size.eNeuro2017 Oct 10Allen SEdoi: 10.1523/ENEURO.0332-16.2017
30537200A Small Cyclic β-Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b.Chembiochem2019 Apr 1Sun YTdoi: 10.1002/cbic.201800645
30626936TGF-β-induced alternative splicing of TAK1 promotes EMT and drug resistance.Oncogene2019 AprTripathi Vdoi: 10.1038/s41388-018-0655-8
30867288RBFox2-miR-34a-Jph2 axis contributes to cardiac decompensation during heart failure.Proc Natl Acad Sci U S A2019 Mar 26Hu Jdoi: 10.1073/pnas.1822176116
27720642RNA Sequence Context Effects Measured InVitro Predict InVivo Protein Binding and Regulation.Mol Cell2016 Oct 20Taliaferro JMdoi: 10.1016/j.molcel.2016.08.035
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000414461RBFOX2-2071706-ENSP00000407855370 (aa)-O43251
ENST00000416721RBFOX2-2081254XM_017028696ENSP00000405651376 (aa)XP_016884185O43251
ENST00000473487RBFOX2-212789-ENSP00000475142234 (aa)-S4R469
ENST00000397305RBFOX2-204759-ENSP00000380472128 (aa)-B0QYY6
ENST00000262829RBFOX2-2011538-ENSP00000262829358 (aa)-O43251
ENST00000449924RBFOX2-2101935XM_006724191ENSP00000391670380 (aa)XP_006724254O43251
ENST00000359369RBFOX2-2021409XM_006724189ENSP00000352328370 (aa)XP_006724252B0QYY4
ENST00000408983RBFOX2-206663-ENSP00000386177200 (aa)-B0QYY7
ENST00000463509RBFOX2-2112396--- (aa)--
ENST00000405409RBFOX2-2056932XM_017028698ENSP00000384944367 (aa)XP_016884187O43251
ENST00000397303RBFOX2-2031354XM_024452191ENSP00000380470357 (aa)XP_024307959B0QYV1
ENST00000495377RBFOX2-214733-ENSP00000474464230 (aa)-S4R3K7
ENST00000491982RBFOX2-2131004--- (aa)--
ENST00000438146RBFOX2-2091356XM_005261428ENSP00000413035451 (aa)XP_005261485O43251
Gene Model
Click here to download ENSG00000100320's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000100320Monocytes8.0720000E-005-
ENSG00000100320Monocytes8.0720000E-005-
ENSG00000100320Longevity7E-627015805
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000100320rs1120592892235902814?Parental longevity (mother's age at death)27015805[0.057-0.146] unit decrease0.10177EFO_0007796
ENSG00000100320rs57501842235830469GSelf-reported math ability30038396[0.018-0.037] unit decrease0.0279EFO_0004875
ENSG00000100320rs59951772235913505AReading disability or specific language impairment (pleiotropy)25065397z score decrease5.026EFO_1001510|EFO_0005424
ENSG00000100320rs1508010522235859882ASuicide attempts30116032[1.19-1.82]1.5076EFO_0004321
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000100320's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000100320RBFOX210066.667ENSG00000078328RBFOX110069.634
ENSG00000100320RBFOX29258.944ENSG00000167281RBFOX39969.880
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000100320RBFOX29964.082ENSAPOG00000004877rbfox29154.978Acanthochromis_polyacanthus
ENSG00000100320RBFOX29960.400ENSAPOG00000021561-9257.388Acanthochromis_polyacanthus
ENSG00000100320RBFOX29993.133ENSAMEG00000007228RBFOX2100100.000Ailuropoda_melanoleuca
ENSG00000100320RBFOX29857.438ENSACIG00000001690rbfox28957.609Amphilophus_citrinellus
ENSG00000100320RBFOX26661.677ENSACIG00000022922-8266.505Amphilophus_citrinellus
ENSG00000100320RBFOX29961.200ENSAOCG00000015358-9257.265Amphiprion_ocellaris
ENSG00000100320RBFOX29965.164ENSAOCG00000013752rbfox29155.411Amphiprion_ocellaris
ENSG00000100320RBFOX29961.200ENSAPEG00000013905-9257.265Amphiprion_percula
ENSG00000100320RBFOX29964.082ENSAPEG00000022359rbfox29155.195Amphiprion_percula
ENSG00000100320RBFOX29961.290ENSATEG00000009959-9457.113Anabas_testudineus
ENSG00000100320RBFOX29962.295ENSATEG00000021951rbfox29155.940Anabas_testudineus
ENSG00000100320RBFOX210097.759ENSAPLG00000007609RBFOX29996.247Anas_platyrhynchos
ENSG00000100320RBFOX210096.639ENSACAG00000016535RBFOX210088.158Anolis_carolinensis
ENSG00000100320RBFOX29995.197ENSANAG00000015245RBFOX210099.020Aotus_nancymaae
ENSG00000100320RBFOX29960.800ENSACLG00000017380-9857.023Astatotilapia_calliptera
ENSG00000100320RBFOX29963.158ENSACLG00000009744rbfox29154.818Astatotilapia_calliptera
ENSG00000100320RBFOX29963.600ENSAMXG00000011451rbfox29555.462Astyanax_mexicanus
ENSG00000100320RBFOX210099.573ENSBTAG00000020125RBFOX210098.660Bos_taurus
ENSG00000100320RBFOX210099.737ENSCJAG00000019456-10099.737Callithrix_jacchus
ENSG00000100320RBFOX210099.573ENSCJAG00000038886-9698.930Callithrix_jacchus
ENSG00000100320RBFOX210099.573ENSCAFG00000001701RBFOX210099.468Canis_familiaris
ENSG00000100320RBFOX210098.450ENSCAFG00020004541RBFOX210088.962Canis_lupus_dingo
ENSG00000100320RBFOX210099.573ENSCHIG00000014027RBFOX210096.896Capra_hircus
ENSG00000100320RBFOX210099.468ENSTSYG00000014123RBFOX210099.468Carlito_syrichta
ENSG00000100320RBFOX210095.385ENSCAPG00000014308RBFOX29383.754Cavia_aperea
ENSG00000100320RBFOX299100.000ENSCPOG00000022180RBFOX210095.503Cavia_porcellus
ENSG00000100320RBFOX210099.734ENSCCAG00000036584RBFOX210099.734Cebus_capucinus
ENSG00000100320RBFOX2100100.000ENSCATG00000038655RBFOX2100100.000Cercocebus_atys
ENSG00000100320RBFOX299100.000ENSCLAG00000017106RBFOX29997.214Chinchilla_lanigera
ENSG00000100320RBFOX2100100.000ENSCSAG00000008110RBFOX28899.381Chlorocebus_sabaeus
ENSG00000100320RBFOX29797.600ENSCHOG00000002887RBFOX29997.222Choloepus_hoffmanni
ENSG00000100320RBFOX210098.880ENSCPBG00000023144RBFOX210098.880Chrysemys_picta_bellii
ENSG00000100320RBFOX2100100.000ENSCANG00000035832RBFOX2100100.000Colobus_angolensis_palliatus
ENSG00000100320RBFOX210098.880ENSCGRG00001017727Rbfox210097.082Cricetulus_griseus_chok1gshd
ENSG00000100320RBFOX210098.688ENSCGRG00000014237Rbfox210098.688Cricetulus_griseus_crigri
ENSG00000100320RBFOX29958.397ENSCSEG00000007360-9255.579Cynoglossus_semilaevis
ENSG00000100320RBFOX29962.903ENSCSEG00000007748rbfox29256.438Cynoglossus_semilaevis
ENSG00000100320RBFOX29959.657ENSCVAG00000016503-8363.125Cyprinodon_variegatus
ENSG00000100320RBFOX29359.657ENSCVAG00000004491rbfox210066.798Cyprinodon_variegatus
ENSG00000100320RBFOX29958.893ENSDARG00000052182rbfox210065.441Danio_rerio
ENSG00000100320RBFOX210098.718ENSDNOG00000004372RBFOX29398.913Dasypus_novemcinctus
ENSG00000100320RBFOX210097.863ENSDORG00000015003Rbfox210095.676Dipodomys_ordii
ENSG00000100320RBFOX210096.899ENSETEG00000005638RBFOX210087.404Echinops_telfairi
ENSG00000100320RBFOX210098.599ENSEASG00005018920RBFOX210097.339Equus_asinus_asinus
ENSG00000100320RBFOX210098.599ENSECAG00000018923RBFOX210097.339Equus_caballus
ENSG00000100320RBFOX210089.916ENSEEUG00000004549RBFOX210093.333Erinaceus_europaeus
ENSG00000100320RBFOX29954.694ENSELUG00000000102rbfox210062.264Esox_lucius
ENSG00000100320RBFOX29956.835ENSELUG00000009404-9454.825Esox_lucius
ENSG00000100320RBFOX210096.923ENSFCAG00000040224-8798.592Felis_catus
ENSG00000100320RBFOX210099.162ENSFCAG00000010061RBFOX210099.162Felis_catus
ENSG00000100320RBFOX210098.039ENSFALG00000013111RBFOX29895.756Ficedula_albicollis
ENSG00000100320RBFOX29478.027ENSFDAG00000006204RBFOX28779.153Fukomys_damarensis
ENSG00000100320RBFOX26460.976ENSFHEG00000006384-9563.043Fundulus_heteroclitus
ENSG00000100320RBFOX29962.500ENSFHEG00000010546rbfox29353.878Fundulus_heteroclitus
ENSG00000100320RBFOX29962.821ENSGMOG00000005278rbfox26876.812Gadus_morhua
ENSG00000100320RBFOX210092.098ENSGALG00000012540RBFOX210092.098Gallus_gallus
ENSG00000100320RBFOX29361.207ENSGAFG00000008448rbfox210067.729Gambusia_affinis
ENSG00000100320RBFOX28950.847ENSGAFG00000017428-5654.545Gambusia_affinis
ENSG00000100320RBFOX29960.417ENSGACG00000007174-8464.024Gasterosteus_aculeatus
ENSG00000100320RBFOX29964.435ENSGACG00000015968rbfox28761.862Gasterosteus_aculeatus
ENSG00000100320RBFOX299100.000ENSGAGG00000025884RBFOX210098.408Gopherus_agassizii
ENSG00000100320RBFOX2100100.000ENSGGOG00000037332RBFOX2100100.000Gorilla_gorilla
ENSG00000100320RBFOX29960.800ENSHBUG00000000856-9855.346Haplochromis_burtoni
ENSG00000100320RBFOX29963.158ENSHBUG00000004356rbfox29755.032Haplochromis_burtoni
ENSG00000100320RBFOX210099.160ENSHGLG00000012907RBFOX210098.936Heterocephalus_glaber_female
ENSG00000100320RBFOX299100.000ENSHGLG00100009986RBFOX210098.688Heterocephalus_glaber_male
ENSG00000100320RBFOX29962.348ENSHCOG00000016102rbfox29255.437Hippocampus_comes
ENSG00000100320RBFOX29960.938ENSHCOG00000005662-9455.439Hippocampus_comes
ENSG00000100320RBFOX29962.800ENSIPUG00000016896rbfox28959.409Ictalurus_punctatus
ENSG00000100320RBFOX299100.000ENSSTOG00000014841RBFOX210096.296Ictidomys_tridecemlineatus
ENSG00000100320RBFOX210097.872ENSJJAG00000014885Rbfox210094.180Jaculus_jaculus
ENSG00000100320RBFOX29958.400ENSKMAG00000013354-9961.042Kryptolebias_marmoratus
ENSG00000100320RBFOX29965.041ENSKMAG00000021880-9156.674Kryptolebias_marmoratus
ENSG00000100320RBFOX29846.862ENSLBEG00000028310-8442.373Labrus_bergylta
ENSG00000100320RBFOX28658.605ENSLBEG00000026187rbfox28262.791Labrus_bergylta
ENSG00000100320RBFOX210075.773ENSLACG00000003339RBFOX210076.031Latimeria_chalumnae
ENSG00000100320RBFOX210099.149ENSLAFG00000027140RBFOX210098.387Loxodonta_africana
ENSG00000100320RBFOX2100100.000ENSMFAG00000031994RBFOX2100100.000Macaca_fascicularis
ENSG00000100320RBFOX2100100.000ENSMMUG00000014010RBFOX2100100.000Macaca_mulatta
ENSG00000100320RBFOX2100100.000ENSMNEG00000034388RBFOX2100100.000Macaca_nemestrina
ENSG00000100320RBFOX2100100.000ENSMLEG00000005854RBFOX2100100.000Mandrillus_leucophaeus
ENSG00000100320RBFOX29958.635ENSMAMG00000008980-9453.498Mastacembelus_armatus
ENSG00000100320RBFOX29964.777ENSMAMG00000004293rbfox28464.537Mastacembelus_armatus
ENSG00000100320RBFOX29960.800ENSMZEG00005004959-9455.136Maylandia_zebra
ENSG00000100320RBFOX29965.041ENSMZEG00005023838rbfox28959.401Maylandia_zebra
ENSG00000100320RBFOX28574.272ENSMGAG00000012724RBFOX210079.512Meleagris_gallopavo
ENSG00000100320RBFOX29999.563ENSMAUG00000018816Rbfox210095.503Mesocricetus_auratus
ENSG00000100320RBFOX210099.737ENSMICG00000035417RBFOX210099.737Microcebus_murinus
ENSG00000100320RBFOX210096.899ENSMICG00000046341-10088.859Microcebus_murinus
ENSG00000100320RBFOX29999.563ENSMOCG00000009327Rbfox210096.032Microtus_ochrogaster
ENSG00000100320RBFOX26660.947ENSMMOG00000007925-8467.513Mola_mola
ENSG00000100320RBFOX29956.250ENSMMOG00000008287rbfox210061.686Mola_mola
ENSG00000100320RBFOX29896.104ENSMODG00000001122RBFOX210094.488Monodelphis_domestica
ENSG00000100320RBFOX29963.710ENSMALG00000000623rbfox210070.037Monopterus_albus
ENSG00000100320RBFOX26658.896ENSMALG00000002264-7763.819Monopterus_albus
ENSG00000100320RBFOX210098.880MGP_CAROLIEiJ_G0019957Rbfox210098.674Mus_caroli
ENSG00000100320RBFOX210098.880ENSMUSG00000033565Rbfox210098.688Mus_musculus
ENSG00000100320RBFOX210098.880MGP_PahariEiJ_G0019967Rbfox210098.674Mus_pahari
ENSG00000100320RBFOX210098.880MGP_SPRETEiJ_G0020860Rbfox210098.674Mus_spretus
ENSG00000100320RBFOX210099.500ENSMPUG00000012555RBFOX29799.233Mustela_putorius_furo
ENSG00000100320RBFOX29898.974ENSMLUG00000002676RBFOX29897.716Myotis_lucifugus
ENSG00000100320RBFOX29999.127ENSNGAG00000020528Rbfox210095.238Nannospalax_galili
ENSG00000100320RBFOX29356.842ENSNBRG00000001568-8354.000Neolamprologus_brichardi
ENSG00000100320RBFOX29963.008ENSNBRG00000018155rbfox29155.076Neolamprologus_brichardi
ENSG00000100320RBFOX210099.734ENSNLEG00000034979RBFOX210099.754Nomascus_leucogenys
ENSG00000100320RBFOX210092.798ENSMEUG00000001547RBFOX210093.316Notamacropus_eugenii
ENSG00000100320RBFOX210096.154ENSOPRG00000014878RBFOX210087.473Ochotona_princeps
ENSG00000100320RBFOX299100.000ENSODEG00000009937RBFOX210097.783Octodon_degus
ENSG00000100320RBFOX29962.917ENSONIG00000008341-9064.835Oreochromis_niloticus
ENSG00000100320RBFOX29967.220ENSONIG00000017998rbfox28864.560Oreochromis_niloticus
ENSG00000100320RBFOX29495.475ENSOANG00000007489RBFOX29895.066Ornithorhynchus_anatinus
ENSG00000100320RBFOX210098.450ENSOCUG00000001349RBFOX29788.265Oryctolagus_cuniculus
ENSG00000100320RBFOX29965.447ENSORLG00000028082rbfox28167.183Oryzias_latipes
ENSG00000100320RBFOX29958.333ENSORLG00000014948-9457.652Oryzias_latipes
ENSG00000100320RBFOX29965.447ENSORLG00020008976rbfox29256.211Oryzias_latipes_hni
ENSG00000100320RBFOX29958.730ENSORLG00020005676-9457.442Oryzias_latipes_hni
ENSG00000100320RBFOX29958.730ENSORLG00015000797-9457.442Oryzias_latipes_hsok
ENSG00000100320RBFOX29965.447ENSORLG00015007027rbfox29256.211Oryzias_latipes_hsok
ENSG00000100320RBFOX29960.159ENSOMEG00000007909-9457.741Oryzias_melastigma
ENSG00000100320RBFOX29964.228ENSOMEG00000015966rbfox29154.936Oryzias_melastigma
ENSG00000100320RBFOX29999.733ENSOGAG00000033250RBFOX210099.733Otolemur_garnettii
ENSG00000100320RBFOX210099.573ENSOARG00000018669RBFOX29896.505Ovis_aries
ENSG00000100320RBFOX2100100.000ENSPPAG00000035653RBFOX2100100.000Pan_paniscus
ENSG00000100320RBFOX210099.162ENSPPRG00000015635RBFOX210099.162Panthera_pardus
ENSG00000100320RBFOX210099.162ENSPTIG00000019147RBFOX210099.162Panthera_tigris_altaica
ENSG00000100320RBFOX2100100.000ENSPTRG00000014305RBFOX2100100.000Pan_troglodytes
ENSG00000100320RBFOX210099.721ENSPANG00000007030RBFOX210099.721Papio_anubis
ENSG00000100320RBFOX29957.031ENSPKIG00000010816-10053.483Paramormyrops_kingsleyae
ENSG00000100320RBFOX28959.641ENSPKIG00000006854-7456.906Paramormyrops_kingsleyae
ENSG00000100320RBFOX210098.599ENSPSIG00000017828RBFOX210098.143Pelodiscus_sinensis
ENSG00000100320RBFOX29962.041ENSPMGG00000007138rbfox210068.561Periophthalmus_magnuspinnatus
ENSG00000100320RBFOX25285.600ENSPMGG00000016969-7961.672Periophthalmus_magnuspinnatus
ENSG00000100320RBFOX29999.563ENSPEMG00000012542Rbfox210096.032Peromyscus_maniculatus_bairdii
ENSG00000100320RBFOX29999.565ENSPCIG00000021550RBFOX210097.486Phascolarctos_cinereus
ENSG00000100320RBFOX29964.557ENSPFOG00000001869-10069.686Poecilia_formosa
ENSG00000100320RBFOX29963.563ENSPFOG00000014209rbfox29354.737Poecilia_formosa
ENSG00000100320RBFOX29959.363ENSPLAG00000002710-10068.498Poecilia_latipinna
ENSG00000100320RBFOX29964.082ENSPLAG00000017308rbfox210068.797Poecilia_latipinna
ENSG00000100320RBFOX28952.101ENSPMEG00000018399-5753.333Poecilia_mexicana
ENSG00000100320RBFOX29962.903ENSPMEG00000007320rbfox210069.288Poecilia_mexicana
ENSG00000100320RBFOX29961.111ENSPMEG00000013663-10068.248Poecilia_mexicana
ENSG00000100320RBFOX26660.355ENSPREG00000016105-6267.172Poecilia_reticulata
ENSG00000100320RBFOX29962.753ENSPREG00000012955rbfox210068.797Poecilia_reticulata
ENSG00000100320RBFOX210099.778ENSPPYG00000011766RBFOX210099.778Pongo_abelii
ENSG00000100320RBFOX275100.000ENSPCAG00000016806RBFOX280100.000Procavia_capensis
ENSG00000100320RBFOX210098.450ENSPCOG00000016273RBFOX29894.550Propithecus_coquereli
ENSG00000100320RBFOX29993.133ENSPVAG00000015844RBFOX27298.790Pteropus_vampyrus
ENSG00000100320RBFOX29959.761ENSPNYG00000020595-9260.714Pundamilia_nyererei
ENSG00000100320RBFOX29963.158ENSPNYG00000016161rbfox29154.957Pundamilia_nyererei
ENSG00000100320RBFOX29654.795ENSPNAG00000000168rbfox28453.009Pygocentrus_nattereri
ENSG00000100320RBFOX29961.570ENSPNAG00000014196-6965.538Pygocentrus_nattereri
ENSG00000100320RBFOX29999.563ENSRNOG00000004688Rbfox210092.035Rattus_norvegicus
ENSG00000100320RBFOX2100100.000ENSRBIG00000033696RBFOX2100100.000Rhinopithecus_bieti
ENSG00000100320RBFOX2100100.000ENSRROG00000035715RBFOX2100100.000Rhinopithecus_roxellana
ENSG00000100320RBFOX210099.734ENSSBOG00000028291RBFOX210099.734Saimiri_boliviensis_boliviensis
ENSG00000100320RBFOX210097.486ENSSHAG00000006835RBFOX29795.153Sarcophilus_harrisii
ENSG00000100320RBFOX29968.571ENSSFOG00015010482-9063.562Scleropages_formosus
ENSG00000100320RBFOX28163.317ENSSFOG00015013291-6463.500Scleropages_formosus
ENSG00000100320RBFOX29965.164ENSSMAG00000013662rbfox29155.748Scophthalmus_maximus
ENSG00000100320RBFOX29961.961ENSSMAG00000004317-9254.274Scophthalmus_maximus
ENSG00000100320RBFOX29959.839ENSSDUG00000009511-9258.190Seriola_dumerili
ENSG00000100320RBFOX29963.821ENSSDUG00000004292rbfox29155.150Seriola_dumerili
ENSG00000100320RBFOX29959.036ENSSLDG00000018052-9257.974Seriola_lalandi_dorsalis
ENSG00000100320RBFOX29352.792ENSSLDG00000023983rbfox27551.005Seriola_lalandi_dorsalis
ENSG00000100320RBFOX265100.000ENSSARG00000001081-61100.000Sorex_araneus
ENSG00000100320RBFOX210096.170ENSSPUG00000011797RBFOX210088.140Sphenodon_punctatus
ENSG00000100320RBFOX29959.200ENSSPAG00000016272-9256.897Stegastes_partitus
ENSG00000100320RBFOX29965.164ENSSPAG00000013681rbfox29155.411Stegastes_partitus
ENSG00000100320RBFOX210099.440ENSSSCG00000000152RBFOX210099.202Sus_scrofa
ENSG00000100320RBFOX210098.039ENSTGUG00000010808RBFOX210097.019Taeniopygia_guttata
ENSG00000100320RBFOX29963.445ENSTRUG00000007739-9656.992Takifugu_rubripes
ENSG00000100320RBFOX26460.000ENSTRUG00000002748rbfox210063.043Takifugu_rubripes
ENSG00000100320RBFOX26058.904ENSTNIG00000006271rbfox29847.737Tetraodon_nigroviridis
ENSG00000100320RBFOX27998.113ENSTBEG00000003297-6399.145Tupaia_belangeri
ENSG00000100320RBFOX210098.061ENSTTRG00000006922RBFOX210099.486Tursiops_truncatus
ENSG00000100320RBFOX210099.149ENSUAMG00000010612RBFOX29698.649Ursus_americanus
ENSG00000100320RBFOX210099.149ENSUMAG00000016785RBFOX210094.070Ursus_maritimus
ENSG00000100320RBFOX210098.450ENSVPAG00000002824RBFOX210093.573Vicugna_pacos
ENSG00000100320RBFOX210099.573ENSVVUG00000023561RBFOX29999.462Vulpes_vulpes
ENSG00000100320RBFOX29982.979ENSXETG00000000231rbfox210082.979Xenopus_tropicalis
ENSG00000100320RBFOX26783.721ENSXCOG00000015905-8180.303Xiphophorus_couchianus
ENSG00000100320RBFOX29961.134ENSXCOG00000013643rbfox210061.694Xiphophorus_couchianus
ENSG00000100320RBFOX29960.714ENSXMAG00000026769-9156.624Xiphophorus_maculatus
ENSG00000100320RBFOX29963.306ENSXMAG00000029498rbfox28262.570Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000381regulation of alternative mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome-ISSProcess
GO:0003714transcription corepressor activity11875103.IDAFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003723RNA binding11875103.IDAFunction
GO:0003729mRNA binding21873635.IBAFunction
GO:0005515protein binding11875103.16189514.16713569.22365833.23275563.25416956.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus11875103.IDAComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005829cytosol-IDAComponent
GO:0006397mRNA processing-IEAProcess
GO:0007399nervous system development21873635.IBAProcess
GO:0008134transcription factor binding11875103.IDAFunction
GO:0008380RNA splicing-IEAProcess
GO:0008543fibroblast growth factor receptor signaling pathway-TASProcess
GO:0010724regulation of definitive erythrocyte differentiation-IEAProcess
GO:0016070RNA metabolic process11875103.TASProcess
GO:0021942radial glia guided migration of Purkinje cell-IEAProcess
GO:0030520intracellular estrogen receptor signaling pathway11875103.IDAProcess
GO:0042127regulation of cell proliferation11875103.TASProcess
GO:0045892negative regulation of transcription, DNA-templated11875103.IDAProcess
GO:0048813dendrite morphogenesis-IEAProcess
GO:0050885neuromuscular process controlling balance-IEAProcess
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