EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
19050074	Genomic alterations link Rho family of GTPases to the highly invasive phenotype of pancreas cancer.	Proc Natl Acad Sci U S A	2008 Dec 9	Kimmelman AC	doi: 10.1073/pnas.0809966105

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr18	23481298	3'UTR	novel		0.15
BLCA	chr18	23477053	Silent	novel	L407L	0.11
BLCA	chr18	23466226	Missense_Mutation	NA	E213K	0.29
BLCA	chr18	23464097	Missense_Mutation	novel	N104D	0.41
BLCA	chr18	23453320	5'UTR	novel		0.21
BLCA	chr18	23464261	Missense_Mutation	novel	S127R	0.53
BLCA	chr18	23466259	Nonsense_Mutation	novel	K224delinsTRNHS*	0.11
BLCA	chr18	23464530	Missense_Mutation	NA	P149A	0.56
CESC	chr18	23466232	Missense_Mutation	rs774183551	R215C	0.34
CESC	chr18	23473437	Missense_Mutation	novel	D275A	0.05
CESC	chr18	23481357	3'UTR	novel		0.36
CESC	chr18	23473543	Silent	novel	F310F	0.06
CESC	chr18	23453405	5'UTR	novel		0.4
COAD	chr18	23463080	Splice_Site	rs373422920	X60_splice	0.41
COAD	chr18	23479412	Frame_Shift_Del	NA	L482*	0.4
COAD	chr18	23464079	Missense_Mutation	NA	R98C	0.05
COAD	chr18	23477034	Missense_Mutation	NA	T401M	0.1
COAD	chr18	23453409	5'UTR	novel		0.64
COAD	chr18	23453422	5'UTR	novel		0.24
COAD	chr18	23464221	Missense_Mutation	NA	E114V	0.37
COAD	chr18	23477264	Missense_Mutation	rs56282762	S447L	0.21
ESCA	chr18	23464531	Missense_Mutation	novel	P149L	0.44
GBM	chr18	23463080	Splice_Site	rs373422920	X60_splice	0.38
HNSC	chr18	23475025	Missense_Mutation	novel	H364R	0.15
HNSC	chr18	23473586	Missense_Mutation	novel	I325V	0.66
HNSC	chr18	23473542	Missense_Mutation	novel	F310Y	0.31
HNSC	chr18	23463080	Splice_Site	rs373422920	X60_splice	0.15
HNSC	chr18	23467520	Missense_Mutation	novel	G270V	0.2
KIRC	chr18	23477013	Missense_Mutation	rs111330062	R394Q	0.07
KIRC	chr18	23464085	Frame_Shift_Ins	novel	*F103Ifs5**	0.35
KIRC	chr18	23479359	Missense_Mutation	NA	E463K	0.08
LAML	chr18	23463074	Silent	novel	E58E	0.05
LAML	chr18	23477056	Missense_Mutation	novel	S408R	0.06
LGG	chr18	23467494	Missense_Mutation	NA	K261N	0.1
LGG	chr18	23464614	Missense_Mutation	novel	A177T	0.15
LGG	chr18	23473444	Missense_Mutation	novel	K277N	0.15
LGG	chr18	23477226	Missense_Mutation	NA	H434Q	0.43
LIHC	chr18	23473440	Missense_Mutation	novel	E276G	0.44
LUAD	chr18	23481305	3'UTR	novel		0.41
LUAD	chr18	23464274	Missense_Mutation	NA	V132I	0.19
LUAD	chr18	23463005	Missense_Mutation	novel	L35F	0.25	RIO1
LUAD	chr18	23473621	Silent	rs766327455	L336L	0.15
LUAD	chr18	23479361	Silent	novel	E463E	0.07
LUAD	chr18	23477179	Missense_Mutation	NA	V419F	0.29
LUAD	chr18	23475087	Frame_Shift_Ins	novel	*A385Gfs13**	0.06
LUSC	chr18	23479337	Silent	NA	V455V	0.14
LUSC	chr18	23477268	Missense_Mutation	novel	Q448H	0.21
LUSC	chr18	23473571	Missense_Mutation	novel	N320Y	0.13
OV	chr18	23481345	3'UTR	novel		0.15
OV	chr18	23453365	5'UTR	novel		0.16
OV	chr18	23479338	Missense_Mutation	NA	K456Q	0.4
OV	chr18	23464618	Missense_Mutation	NA	R178T	0.49
PAAD	chr18	23473590	Missense_Mutation	rs756485853	R326H	0.21
PAAD	chr18	23477226	Silent	rs56187215	H434H	0.22
READ	chr18	23453438	5'UTR	novel		0.45
SARC	chr18	23475041	Silent	rs767271842	A369A	0.16
SARC	chr18	23475042	Missense_Mutation	novel	P370S	0.16
SKCM	chr18	23453291	5'UTR	novel		0.27
SKCM	chr18	23464229	Nonsense_Mutation	rs756927666	R117*	0.14
SKCM	chr18	23464247	Missense_Mutation	NA	E123K	0.22
SKCM	chr18	23481363	3'UTR	novel		0.19
SKCM	chr18	23464215	Missense_Mutation	NA	S112F	0.16
SKCM	chr18	23473588	Silent	NA	I325I	0.1
SKCM	chr18	23473499	Missense_Mutation	novel	L296F	0.35
SKCM	chr18	23473556	Missense_Mutation	rs367683674	R315C	0.34
SKCM	chr18	23464096	Silent	novel	F103F	0.12
SKCM	chr18	23473553	Missense_Mutation	rs769139969	D314N	0.95
STAD	chr18	23477052	Frame_Shift_Ins	novel	*Y410Qfs2**	0.34
STAD	chr18	23464525	Frame_Shift_Ins	novel	*P149Gfs24**	0.31
STAD	chr18	23477226	Silent	rs56187215	H434H	0.4
STAD	chr18	23479383	Missense_Mutation	rs767167541	L471V	0.23
STAD	chr18	23473621	Silent	rs766327455	L336L	0.22
STAD	chr18	23453300	5'UTR	novel		0.22
STAD	chr18	23477032	Silent	NA	C400C	0.23
STAD	chr18	23453361	5'UTR	novel		0.37
STAD	chr18	23473606	Silent	NA	K331K	0.31
STAD	chr18	23464042	Silent	NA	Q85Q	0.19
UCEC	chr18	23464566	Missense_Mutation	NA	D161Y	0.35
UCEC	chr18	23473557	Missense_Mutation	rs762479878	R315H	0.24
UCEC	chr18	23466235	Nonsense_Mutation	NA	R216*	0.43
UCEC	chr18	23467460	Missense_Mutation	novel	L250S	0.41
UCEC	chr18	23477191	Missense_Mutation	NA	D423N	0.47
UCEC	chr18	23479380	Missense_Mutation	novel	G470C	0.4
UCEC	chr18	23464079	Missense_Mutation	NA	R98C	0.36
UCEC	chr18	23481503	3'UTR	novel		0.16
UCEC	chr18	23464091	Missense_Mutation	NA	K102Q	0.23
UCEC	chr18	23464255	Silent	rs774587933	S125S	0.24
UCEC	chr18	23473518	Missense_Mutation	rs747008828	R302H	0.2
UCEC	chr18	23477039	Missense_Mutation	NA	V403I	0.28
UCEC	chr18	23481440	3'UTR	novel		0.13
UCEC	chr18	23473622	Missense_Mutation	rs199977739	A337T	0.46
UCEC	chr18	23453422	5'UTR	novel		0.33
UCEC	chr18	23481440	3'UTR	novel		0.13
UCEC	chr18	23462985	Missense_Mutation	NA	N29H	0.44	RIO1
UCEC	chr18	23479356	Nonsense_Mutation	NA	R462*	0.44
UCEC	chr18	23473513	Missense_Mutation	novel	K300N	0.33
UCEC	chr18	23477265	Silent	rs762402323	S447S	0.07
UCEC	chr18	23464527	Missense_Mutation	novel	V148I	0.31
UCEC	chr18	23467415	Missense_Mutation	novel	P235H	0.37
UCEC	chr18	23464085	Frame_Shift_Ins	novel	*F103Ifs5**	0.29
UCEC	chr18	23464085	Frame_Shift_Ins	novel	*F103Ifs5**	0.56
UCEC	chr18	23463064	Frame_Shift_Del	novel	*P57Lfs113**	0.28
UCEC	chr18	23481521	3'UTR	novel		0.46
UCEC	chr18	23477228	Missense_Mutation	novel	G435D	0.41
UCEC	chr18	23453463	Silent	novel	S8S	0.05
UCEC	chr18	23481440	3'UTR	novel		0.23
UCEC	chr18	23463001	Missense_Mutation	novel	S34Y	0.36	RIO1
UCEC	chr18	23453412	5'UTR	novel		0.39
UCEC	chr18	23481503	3'UTR	novel		0.19
UCEC	chr18	23463037	Missense_Mutation	novel	E46G	0.03
UCEC	chr18	23464086	Frame_Shift_Del	NA	*K102Nfs68**	0.68
UCEC	chr18	23453440	Translation_Start_Site	novel	M1?	0.12	RIO1
UCEC	chr18	23463079	Missense_Mutation	rs200387789	A60V	0.36
UCEC	chr18	23464085	Frame_Shift_Ins	novel	*F103Ifs5**	0.13
UCEC	chr18	23464107	Missense_Mutation	rs771834858	S107N	0.38
UCEC	chr18	23473481	Missense_Mutation	novel	K290E	0.34
UCEC	chr18	23462995	Missense_Mutation	NA	S32Y	0.37	RIO1
UCEC	chr18	23463036	Nonsense_Mutation	NA	E46*	0.33
UCEC	chr18	23481440	3'UTR	novel		0.18
UCEC	chr18	23463009	Missense_Mutation	novel	D37N	0.17	RIO1
UCEC	chr18	23474996	Silent	novel	K354K	0.44
UCEC	chr18	23463042	Nonsense_Mutation	novel	Q48*	0.28

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
LUAD	AMP	0.1531	0.0060965

Survival Analysis

Cancer	P-value	Q-value
THYM	0.031	Kaplan-Meier Survival Analysis
KIRC	0.00014	Kaplan-Meier Survival Analysis
ACC	0.00023	Kaplan-Meier Survival Analysis
SKCM	0.013	Kaplan-Meier Survival Analysis
PRAD	0.00067	Kaplan-Meier Survival Analysis
KIRP	0.026	Kaplan-Meier Survival Analysis
PAAD	0.0014	Kaplan-Meier Survival Analysis
READ	0.05	Kaplan-Meier Survival Analysis
KICH	0.024	Kaplan-Meier Survival Analysis
LIHC	0.0077	Kaplan-Meier Survival Analysis
LGG	0.00012	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000101782 (Gene tree)
Gene ID: 8780
Gene Symbol: RIOK3
Alias: SUDD
Full Name: RIO kinase 3
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 33,781 bases
Position: chr18:23,452,823-23,486,603
Accession: 11451
RBP type: canonical RBP
Summary: This gene was first identified by the similarity of its product to the Aspergillus nidulans SUDD protein. This gene is now recognized as a member of the right open reading frame (RIO) kinase gene family. This gene encodes a serine/threonine kinase that localizes to the cytoplasm and plays a role in the processing of the pre-40 S ribosomal subunit. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2017]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000463660	RIO1	PF01163.22	1.2e-74	1	1
ENSP00000341874	RIO1	PF01163.22	1.3e-74	1	1
ENSP00000462548	RIO1	PF01163.22	2.2e-70	1	1
ENSP00000463644	RIO1	PF01163.22	4e-11	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000584960	RIOK3-210	572	-	-	- (aa)	-	-
ENST00000584130	RIOK3-209	591	-	ENSP00000463791	135 (aa)	-	J3QQL5
ENST00000584052	RIOK3-208	659	-	-	- (aa)	-	-
ENST00000581302	RIOK3-205	3049	-	-	- (aa)	-	-
ENST00000581339	RIOK3-206	888	-	-	- (aa)	-	-
ENST00000584992	RIOK3-211	396	-	-	- (aa)	-	-
ENST00000339486	RIOK3-201	4038	XM_011526242	ENSP00000341874	519 (aa)	XP_011524544	O14730
ENST00000581585	RIOK3-207	1966	-	ENSP00000463660	503 (aa)	-	B4E1Q4
ENST00000581220	RIOK3-204	2384	-	-	- (aa)	-	-
ENST00000577501	RIOK3-203	1904	-	ENSP00000462548	516 (aa)	-	O14730
ENST00000577250	RIOK3-202	685	-	ENSP00000463644	89 (aa)	-	J3QLP4

Gene Model

Click here to download ENSG00000101782's gene model file

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000101782	rs140271614	18	23469770	A	High light scatter reticulocyte count	27863252	[0.13-0.22] unit increase	0.1745625	EFO_0007986
ENSG00000101782	rs140271614	18	23469770	A	High light scatter reticulocyte percentage of red cells	27863252	[0.13-0.23] unit increase	0.179018	EFO_0007986
ENSG00000101782	rs140271614	18	23469770	A	Reticulocyte count	27863252	[0.13-0.23] unit increase	0.1775436	EFO_0007986
ENSG00000101782	rs140271614	18	23469770	A	Reticulocyte fraction of red cells	27863252	[0.14-0.23] unit increase	0.1838517	EFO_0007986
ENSG00000101782	rs33969048	18	23477246	A	Immature fraction of reticulocytes	27863252	[0.15-0.28] unit increase	0.2133869	EFO_0007986
ENSG00000101782	rs9954741	18	23459429	C	Anthropometric traits	30166351	[0.0099-0.0169] unit decrease	0.0134	EFO_0004324\|EFO_0004339
ENSG00000101782	rs9954741	18	23459429	?	Anthropometric traits (multi-trait analysis)	30166351			EFO_0004324

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000101782's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000101782	RIOK3	90	41.250	ENSG00000124784	RIOK1	53	43.131

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000101782	RIOK3	99	70.192	ENSAPOG00000020861	riok3	99	70.192	Acanthochromis_polyacanthus
ENSG00000101782	RIOK3	100	96.724	ENSAMEG00000013754	RIOK3	85	96.724	Ailuropoda_melanoleuca
ENSG00000101782	RIOK3	99	72.587	ENSACIG00000019894	riok3	98	74.451	Amphilophus_citrinellus
ENSG00000101782	RIOK3	99	72.692	ENSAOCG00000007172	riok3	99	74.949	Amphiprion_ocellaris
ENSG00000101782	RIOK3	99	72.500	ENSAPEG00000002536	riok3	99	74.127	Amphiprion_percula
ENSG00000101782	RIOK3	97	73.413	ENSATEG00000018303	riok3	99	73.413	Anabas_testudineus
ENSG00000101782	RIOK3	99	86.513	ENSAPLG00000006497	RIOK3	100	86.513	Anas_platyrhynchos
ENSG00000101782	RIOK3	99	82.239	ENSACAG00000000159	RIOK3	99	82.239	Anolis_carolinensis
ENSG00000101782	RIOK3	100	73.622	ENSANAG00000030146	RIOK3	100	73.622	Aotus_nancymaae
ENSG00000101782	RIOK3	93	75.926	ENSACLG00000018966	riok3	98	75.926	Astatotilapia_calliptera
ENSG00000101782	RIOK3	97	73.320	ENSAMXG00000015617	riok3	99	72.605	Astyanax_mexicanus
ENSG00000101782	RIOK3	100	95.954	ENSBTAG00000010042	RIOK3	100	95.954	Bos_taurus
ENSG00000101782	RIOK3	93	35.542	WBGene00014012	riok-3	91	35.542	Caenorhabditis_elegans
ENSG00000101782	RIOK3	100	98.651	ENSCJAG00000020556	RIOK3	100	98.651	Callithrix_jacchus
ENSG00000101782	RIOK3	100	96.339	ENSCAFG00000018201	RIOK3	100	96.339	Canis_familiaris
ENSG00000101782	RIOK3	99	96.132	ENSCAFG00020014801	RIOK3	99	97.080	Canis_lupus_dingo
ENSG00000101782	RIOK3	100	96.339	ENSCHIG00000009312	RIOK3	100	96.339	Capra_hircus
ENSG00000101782	RIOK3	100	95.954	ENSTSYG00000000142	RIOK3	99	97.098	Carlito_syrichta
ENSG00000101782	RIOK3	89	95.217	ENSCAPG00000005756	RIOK3	95	95.217	Cavia_aperea
ENSG00000101782	RIOK3	100	94.027	ENSCPOG00000007991	RIOK3	100	94.027	Cavia_porcellus
ENSG00000101782	RIOK3	100	98.266	ENSCCAG00000028338	RIOK3	99	96.505	Cebus_capucinus
ENSG00000101782	RIOK3	100	98.651	ENSCATG00000040824	RIOK3	100	98.651	Cercocebus_atys
ENSG00000101782	RIOK3	99	94.553	ENSCLAG00000006767	RIOK3	99	94.553	Chinchilla_lanigera
ENSG00000101782	RIOK3	100	99.037	ENSCSAG00000017680	RIOK3	100	99.037	Chlorocebus_sabaeus
ENSG00000101782	RIOK3	87	96.310	ENSCHOG00000008343	RIOK3	87	96.310	Choloepus_hoffmanni
ENSG00000101782	RIOK3	100	86.207	ENSCPBG00000027226	RIOK3	100	86.207	Chrysemys_picta_bellii
ENSG00000101782	RIOK3	97	49.531	ENSCSAVG00000003068	-	100	51.844	Ciona_savignyi
ENSG00000101782	RIOK3	80	100.000	ENSCANG00000035939	RIOK3	95	99.728	Colobus_angolensis_palliatus
ENSG00000101782	RIOK3	100	92.678	ENSCGRG00001013249	Riok3	100	92.678	Cricetulus_griseus_chok1gshd
ENSG00000101782	RIOK3	100	92.293	ENSCGRG00000017636	Riok3	100	92.293	Cricetulus_griseus_crigri
ENSG00000101782	RIOK3	99	71.098	ENSCSEG00000018289	riok3	99	73.029	Cynoglossus_semilaevis
ENSG00000101782	RIOK3	97	71.992	ENSCVAG00000011848	riok3	98	71.992	Cyprinodon_variegatus
ENSG00000101782	RIOK3	96	73.465	ENSDARG00000042751	riok3	97	73.465	Danio_rerio
ENSG00000101782	RIOK3	100	96.146	ENSDNOG00000039433	RIOK3	100	96.146	Dasypus_novemcinctus
ENSG00000101782	RIOK3	100	94.990	ENSDORG00000011663	Riok3	100	94.990	Dipodomys_ordii
ENSG00000101782	RIOK3	89	43.975	FBgn0031643	CG3008	84	42.578	Drosophila_melanogaster
ENSG00000101782	RIOK3	93	93.595	ENSETEG00000003689	RIOK3	100	93.595	Echinops_telfairi
ENSG00000101782	RIOK3	94	53.783	ENSEBUG00000000555	riok3	96	53.783	Eptatretus_burgeri
ENSG00000101782	RIOK3	100	93.642	ENSEASG00005002317	RIOK3	100	93.642	Equus_asinus_asinus
ENSG00000101782	RIOK3	100	93.256	ENSECAG00000009028	RIOK3	100	93.256	Equus_caballus
ENSG00000101782	RIOK3	96	77.108	ENSEEUG00000007005	RIOK3	100	77.108	Erinaceus_europaeus
ENSG00000101782	RIOK3	100	73.129	ENSELUG00000017655	riok3	99	73.129	Esox_lucius
ENSG00000101782	RIOK3	100	96.917	ENSFCAG00000000517	RIOK3	100	96.917	Felis_catus
ENSG00000101782	RIOK3	96	87.649	ENSFALG00000006145	RIOK3	100	86.042	Ficedula_albicollis
ENSG00000101782	RIOK3	100	92.871	ENSFDAG00000001548	RIOK3	100	92.871	Fukomys_damarensis
ENSG00000101782	RIOK3	93	74.897	ENSFHEG00000011350	riok3	99	72.201	Fundulus_heteroclitus
ENSG00000101782	RIOK3	87	74.434	ENSGMOG00000005157	riok3	98	73.102	Gadus_morhua
ENSG00000101782	RIOK3	96	87.251	ENSGALG00000015004	RIOK3	100	85.851	Gallus_gallus
ENSG00000101782	RIOK3	92	63.866	ENSGAFG00000002403	riok3	89	64.026	Gambusia_affinis
ENSG00000101782	RIOK3	96	72.167	ENSGACG00000000880	riok3	97	72.167	Gasterosteus_aculeatus
ENSG00000101782	RIOK3	100	84.100	ENSGAGG00000024785	RIOK3	100	84.100	Gopherus_agassizii
ENSG00000101782	RIOK3	74	96.970	ENSGGOG00000036734	-	100	100.000	Gorilla_gorilla
ENSG00000101782	RIOK3	99	72.587	ENSHBUG00000003233	riok3	99	73.114	Haplochromis_burtoni
ENSG00000101782	RIOK3	100	93.256	ENSHGLG00000003885	RIOK3	100	93.256	Heterocephalus_glaber_female
ENSG00000101782	RIOK3	100	93.256	ENSHGLG00100002077	RIOK3	100	93.256	Heterocephalus_glaber_male
ENSG00000101782	RIOK3	99	71.103	ENSHCOG00000006794	riok3	99	71.103	Hippocampus_comes
ENSG00000101782	RIOK3	96	73.239	ENSIPUG00000001406	Riok3	97	73.239	Ictalurus_punctatus
ENSG00000101782	RIOK3	100	95.568	ENSSTOG00000006517	RIOK3	100	95.568	Ictidomys_tridecemlineatus
ENSG00000101782	RIOK3	100	93.702	ENSJJAG00000023689	Riok3	100	93.702	Jaculus_jaculus
ENSG00000101782	RIOK3	99	71.899	ENSKMAG00000007259	riok3	99	71.899	Kryptolebias_marmoratus
ENSG00000101782	RIOK3	97	72.244	ENSLBEG00000013689	riok3	98	72.244	Labrus_bergylta
ENSG00000101782	RIOK3	99	75.388	ENSLACG00000017326	RIOK3	99	75.388	Latimeria_chalumnae
ENSG00000101782	RIOK3	100	77.308	ENSLOCG00000001652	riok3	100	77.308	Lepisosteus_oculatus
ENSG00000101782	RIOK3	100	93.846	ENSLAFG00000001380	RIOK3	100	93.846	Loxodonta_africana
ENSG00000101782	RIOK3	100	98.844	ENSMMUG00000021478	RIOK3	100	98.844	Macaca_mulatta
ENSG00000101782	RIOK3	100	86.513	ENSMNEG00000041106	RIOK3	100	86.513	Macaca_nemestrina
ENSG00000101782	RIOK3	100	99.037	ENSMLEG00000028187	RIOK3	100	99.037	Mandrillus_leucophaeus
ENSG00000101782	RIOK3	97	72.835	ENSMAMG00000008502	riok3	98	72.835	Mastacembelus_armatus
ENSG00000101782	RIOK3	99	72.587	ENSMZEG00005020212	riok3	99	73.114	Maylandia_zebra
ENSG00000101782	RIOK3	100	84.866	ENSMGAG00000010079	RIOK3	100	84.866	Meleagris_gallopavo
ENSG00000101782	RIOK3	99	93.230	ENSMAUG00000020527	Riok3	99	93.230	Mesocricetus_auratus
ENSG00000101782	RIOK3	100	96.146	ENSMICG00000009293	RIOK3	99	96.311	Microcebus_murinus
ENSG00000101782	RIOK3	99	92.412	ENSMOCG00000012114	Riok3	96	92.412	Microtus_ochrogaster
ENSG00000101782	RIOK3	93	71.869	ENSMMOG00000019204	riok3	98	71.869	Mola_mola
ENSG00000101782	RIOK3	100	91.154	ENSMODG00000021496	RIOK3	100	91.154	Monodelphis_domestica
ENSG00000101782	RIOK3	99	71.648	ENSMALG00000020848	riok3	98	73.061	Monopterus_albus
ENSG00000101782	RIOK3	99	93.605	MGP_CAROLIEiJ_G0022001	Riok3	99	93.605	Mus_caroli
ENSG00000101782	RIOK3	99	94.186	ENSMUSG00000024404	Riok3	98	100.000	Mus_musculus
ENSG00000101782	RIOK3	99	94.380	MGP_PahariEiJ_G0018739	Riok3	99	94.380	Mus_pahari
ENSG00000101782	RIOK3	100	96.917	ENSMPUG00000005772	RIOK3	100	96.917	Mustela_putorius_furo
ENSG00000101782	RIOK3	99	93.436	ENSMLUG00000007081	RIOK3	99	93.436	Myotis_lucifugus
ENSG00000101782	RIOK3	99	94.369	ENSNGAG00000011446	Riok3	99	94.369	Nannospalax_galili
ENSG00000101782	RIOK3	75	75.269	ENSNBRG00000016677	riok3	83	75.269	Neolamprologus_brichardi
ENSG00000101782	RIOK3	100	99.229	ENSNLEG00000006758	RIOK3	100	99.229	Nomascus_leucogenys
ENSG00000101782	RIOK3	100	90.385	ENSMEUG00000006292	RIOK3	100	90.385	Notamacropus_eugenii
ENSG00000101782	RIOK3	100	94.027	ENSOPRG00000004803	RIOK3	100	94.027	Ochotona_princeps
ENSG00000101782	RIOK3	100	92.678	ENSODEG00000006444	RIOK3	100	92.678	Octodon_degus
ENSG00000101782	RIOK3	95	73.653	ENSONIG00000013422	riok3	99	73.904	Oreochromis_niloticus
ENSG00000101782	RIOK3	94	89.184	ENSOANG00000012074	RIOK3	100	89.184	Ornithorhynchus_anatinus
ENSG00000101782	RIOK3	100	95.376	ENSOCUG00000016820	RIOK3	100	95.376	Oryctolagus_cuniculus
ENSG00000101782	RIOK3	97	72.189	ENSORLG00000003395	riok3	99	72.189	Oryzias_latipes
ENSG00000101782	RIOK3	97	72.387	ENSORLG00020000672	riok3	99	72.387	Oryzias_latipes_hni
ENSG00000101782	RIOK3	97	72.189	ENSORLG00015007372	riok3	99	72.189	Oryzias_latipes_hsok
ENSG00000101782	RIOK3	97	72.421	ENSOMEG00000001380	riok3	98	72.421	Oryzias_melastigma
ENSG00000101782	RIOK3	100	96.532	ENSOGAG00000014502	RIOK3	90	96.532	Otolemur_garnettii
ENSG00000101782	RIOK3	100	96.532	ENSOARG00000008042	RIOK3	100	96.532	Ovis_aries
ENSG00000101782	RIOK3	100	99.807	ENSPPAG00000030258	RIOK3	100	99.807	Pan_paniscus
ENSG00000101782	RIOK3	100	96.917	ENSPPRG00000023302	RIOK3	100	96.917	Panthera_pardus
ENSG00000101782	RIOK3	100	97.110	ENSPTIG00000000960	RIOK3	100	97.110	Panthera_tigris_altaica
ENSG00000101782	RIOK3	100	99.807	ENSPTRG00000009918	RIOK3	100	99.807	Pan_troglodytes
ENSG00000101782	RIOK3	100	99.037	ENSPANG00000011485	RIOK3	100	99.037	Papio_anubis
ENSG00000101782	RIOK3	96	77.445	ENSPKIG00000018297	riok3	98	77.445	Paramormyrops_kingsleyae
ENSG00000101782	RIOK3	100	84.261	ENSPSIG00000006250	RIOK3	100	84.261	Pelodiscus_sinensis
ENSG00000101782	RIOK3	92	73.237	ENSPMGG00000009414	riok3	99	73.237	Periophthalmus_magnuspinnatus
ENSG00000101782	RIOK3	100	92.293	ENSPEMG00000023794	Riok3	100	92.293	Peromyscus_maniculatus_bairdii
ENSG00000101782	RIOK3	85	72.093	ENSPMAG00000003258	riok3	97	72.286	Petromyzon_marinus
ENSG00000101782	RIOK3	93	91.494	ENSPCIG00000013991	RIOK3	100	91.494	Phascolarctos_cinereus
ENSG00000101782	RIOK3	95	73.077	ENSPFOG00000024127	riok3	98	72.530	Poecilia_formosa
ENSG00000101782	RIOK3	95	73.279	ENSPLAG00000004956	riok3	98	72.727	Poecilia_latipinna
ENSG00000101782	RIOK3	95	73.535	ENSPMEG00000020108	riok3	98	72.978	Poecilia_mexicana
ENSG00000101782	RIOK3	98	71.345	ENSPREG00000010010	riok3	99	71.345	Poecilia_reticulata
ENSG00000101782	RIOK3	100	93.023	ENSPPYG00000009062	RIOK3	100	93.023	Pongo_abelii
ENSG00000101782	RIOK3	77	92.251	ENSPCAG00000001021	RIOK3	76	92.251	Procavia_capensis
ENSG00000101782	RIOK3	100	96.724	ENSPCOG00000022631	RIOK3	100	96.724	Propithecus_coquereli
ENSG00000101782	RIOK3	100	82.081	ENSPVAG00000015817	RIOK3	100	82.081	Pteropus_vampyrus
ENSG00000101782	RIOK3	99	72.587	ENSPNYG00000003271	riok3	99	73.114	Pundamilia_nyererei
ENSG00000101782	RIOK3	100	72.624	ENSPNAG00000006213	riok3	99	72.624	Pygocentrus_nattereri
ENSG00000101782	RIOK3	100	94.027	ENSRNOG00000023376	Riok3	100	94.027	Rattus_norvegicus
ENSG00000101782	RIOK3	100	98.844	ENSRBIG00000035071	RIOK3	100	98.844	Rhinopithecus_bieti
ENSG00000101782	RIOK3	100	98.651	ENSRROG00000045710	RIOK3	100	98.651	Rhinopithecus_roxellana
ENSG00000101782	RIOK3	100	98.651	ENSSBOG00000034387	RIOK3	100	98.651	Saimiri_boliviensis_boliviensis
ENSG00000101782	RIOK3	100	91.154	ENSSHAG00000011854	RIOK3	100	91.154	Sarcophilus_harrisii
ENSG00000101782	RIOK3	100	73.714	ENSSFOG00015012912	riok3	98	75.197	Scleropages_formosus
ENSG00000101782	RIOK3	99	72.553	ENSSMAG00000011527	riok3	99	72.553	Scophthalmus_maximus
ENSG00000101782	RIOK3	99	72.447	ENSSDUG00000016018	riok3	99	72.640	Seriola_dumerili
ENSG00000101782	RIOK3	65	78.261	ENSSLDG00000022246	riok3	93	77.222	Seriola_lalandi_dorsalis
ENSG00000101782	RIOK3	87	97.048	ENSSARG00000010154	RIOK3	87	97.048	Sorex_araneus
ENSG00000101782	RIOK3	99	85.907	ENSSPUG00000015246	RIOK3	99	85.907	Sphenodon_punctatus
ENSG00000101782	RIOK3	99	72.308	ENSSPAG00000000601	riok3	99	72.308	Stegastes_partitus
ENSG00000101782	RIOK3	100	96.339	ENSSSCG00000029518	RIOK3	100	96.881	Sus_scrofa
ENSG00000101782	RIOK3	96	87.052	ENSTGUG00000010392	RIOK3	100	85.468	Taeniopygia_guttata
ENSG00000101782	RIOK3	99	70.577	ENSTRUG00000007055	riok3	99	70.577	Takifugu_rubripes
ENSG00000101782	RIOK3	93	68.107	ENSTNIG00000001855	riok3	99	68.107	Tetraodon_nigroviridis
ENSG00000101782	RIOK3	74	93.939	ENSTBEG00000015851	RIOK3	55	100.000	Tupaia_belangeri
ENSG00000101782	RIOK3	100	95.376	ENSTTRG00000008839	RIOK3	100	95.376	Tursiops_truncatus
ENSG00000101782	RIOK3	100	96.724	ENSUAMG00000018410	RIOK3	100	96.724	Ursus_americanus
ENSG00000101782	RIOK3	99	97.266	ENSUMAG00000020218	RIOK3	97	97.266	Ursus_maritimus
ENSG00000101782	RIOK3	100	96.532	ENSVPAG00000009034	RIOK3	100	96.532	Vicugna_pacos
ENSG00000101782	RIOK3	100	96.339	ENSVVUG00000003651	RIOK3	76	96.339	Vulpes_vulpes
ENSG00000101782	RIOK3	100	75.769	ENSXETG00000027370	riok3	100	75.769	Xenopus_tropicalis
ENSG00000101782	RIOK3	95	72.112	ENSXCOG00000001032	riok3	99	72.112	Xiphophorus_couchianus
ENSG00000101782	RIOK3	97	72.134	ENSXMAG00000012902	riok3	98	72.134	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0004674	protein serine/threonine kinase activity	25865883.	IDA	Function
GO:0005515	protein binding	19557502.21988832.24807708.25865883.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	TAS	Component
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0007059	chromosome segregation	9602165.	TAS	Process
GO:0030490	maturation of SSU-rRNA	21873635.	IBA	Process
GO:0030490	maturation of SSU-rRNA	22418843.	IMP	Process
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component
GO:0030688	preribosome, small subunit precursor	22072790.22418843.	IDA	Component
GO:0032463	negative regulation of protein homooligomerization	25865883.	IDA	Process
GO:0032728	positive regulation of interferon-beta production	24807708.	IMP	Process
GO:0039534	negative regulation of MDA-5 signaling pathway	25865883.	IMP	Process
GO:0043124	negative regulation of I-kappaB kinase/NF-kappaB signaling	19557502.	IDA	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0045089	positive regulation of innate immune response	24807708.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051607	defense response to virus	-	IEA	Process
GO:0071359	cellular response to dsRNA	24807708.	IMP	Process
GO:0089720	caspase binding	19557502.	IDA	Function
GO:0098586	cellular response to virus	24807708.	IMP	Process
GO:1990786	cellular response to dsDNA	24807708.	IMP	Process

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.