EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
COADchrX488312163'UTRrs7819941160.24
COADchrX488311893'UTRnovel0.29
LUADchrX48832222SilentnovelA78A0.47
STADchrX48831276Missense_MutationnovelR256H0.19
UCECchrX48831276Missense_MutationnovelR256H0.47
UCECchrX48831307Missense_MutationnovelE246K0.29
UCECchrX48831400Missense_MutationnovelP215S0.33
UCECchrX488311733'UTRnovel0.57
UCECchrX488312503'UTRnovel0.46
UCECchrX48831276Missense_MutationnovelR256H0.28

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
OVAMP0.21428.1018e-09
SARCAMP0.29180.19108
THCADEL0.0020.21991

Survival Analysis
CancerP-value Q-value
KIRC0.043

Kaplan-Meier Survival Analysis

SARC0.037

Kaplan-Meier Survival Analysis

MESO0.031

Kaplan-Meier Survival Analysis

HNSC0.034

Kaplan-Meier Survival Analysis

PRAD0.019

Kaplan-Meier Survival Analysis

BRCA0.036

Kaplan-Meier Survival Analysis

KIRP0.026

Kaplan-Meier Survival Analysis

PAAD0.0001

Kaplan-Meier Survival Analysis

UCEC0.0019

Kaplan-Meier Survival Analysis

LIHC0.036

Kaplan-Meier Survival Analysis

DLBC0.021

Kaplan-Meier Survival Analysis

LGG0.0014

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000102109 (Gene tree)
Gene ID
27344
Gene Symbol
PCSK1N
Alias
SAAS|SgVIII|SCG8|proSAAS|PEN|BigLEN
Full Name
proprotein convertase subtilisin/kexin type 1 inhibitor
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
4,547 bases
Position
chrX:48,831,092-48,835,638
Accession
17301
RBP type
canonical RBP
Summary
The protein encoded by this gene functions as an inhibitor of prohormone convertase 1, which regulates the proteolytic cleavage of neuroendocrine peptide precursors. The proprotein is further processed into multiple short peptides. A polymorphism within this gene may be associated with obesity. [provided by RefSeq, Aug 2013]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000218230ProSAASPF07259.122e-10211

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
23342162Pax6 interactions with chromatin and identification of its novel direct target genes in lens and forebrain.PLoS One2013Xie Qdoi: 10.1371/journal.pone.0054507
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000611033PCSK1N-202392--- (aa)--
ENST00000218230PCSK1N-2011050-ENSP00000218230260 (aa)-Q9UHG2
Gene Model
Click here to download ENSG00000102109's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000102109's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000102109PCSK1N10096.154ENSANAG00000031176PCSK1N10096.154Aotus_nancymaae
ENSG00000102109PCSK1N9987.645ENSBTAG00000013250PCSK1N8587.645Bos_taurus
ENSG00000102109PCSK1N10096.154ENSCJAG00000047969PCSK1N10096.154Callithrix_jacchus
ENSG00000102109PCSK1N10088.846ENSCAFG00000015657PCSK1N10088.846Canis_familiaris
ENSG00000102109PCSK1N10088.846ENSCAFG00020020325PCSK1N10088.846Canis_lupus_dingo
ENSG00000102109PCSK1N9987.259ENSCHIG00000016734PCSK1N10085.328Capra_hircus
ENSG00000102109PCSK1N10061.923ENSTSYG00000030484PCSK1N10059.387Carlito_syrichta
ENSG00000102109PCSK1N9583.468ENSCPOG00000007567PCSK1N10083.142Cavia_porcellus
ENSG00000102109PCSK1N10095.000ENSCCAG00000032016PCSK1N10095.000Cebus_capucinus
ENSG00000102109PCSK1N10097.701ENSCATG00000036843PCSK1N10097.701Cercocebus_atys
ENSG00000102109PCSK1N5883.051ENSCLAG00000003392PCSK1N10079.817Chinchilla_lanigera
ENSG00000102109PCSK1N10097.692ENSCSAG00000013181PCSK1N10097.692Chlorocebus_sabaeus
ENSG00000102109PCSK1N7793.750ENSCANG00000033540PCSK1N9195.918Colobus_angolensis_palliatus
ENSG00000102109PCSK1N10085.769ENSCGRG00001013577Pcsk1n10085.769Cricetulus_griseus_chok1gshd
ENSG00000102109PCSK1N9986.047ENSDNOG00000045077PCSK1N9987.209Dasypus_novemcinctus
ENSG00000102109PCSK1N10086.154ENSDORG00000007957Pcsk1n10086.154Dipodomys_ordii
ENSG00000102109PCSK1N9384.298ENSEASG00005019237PCSK1N8690.090Equus_asinus_asinus
ENSG00000102109PCSK1N10091.154ENSECAG00000038828PCSK1N10091.154Equus_caballus
ENSG00000102109PCSK1N7577.551ENSEEUG00000013069PCSK1N10082.143Erinaceus_europaeus
ENSG00000102109PCSK1N10087.692ENSFCAG00000011223PCSK1N10087.692Felis_catus
ENSG00000102109PCSK1N10099.231ENSGGOG00000004538PCSK1N10099.231Gorilla_gorilla
ENSG00000102109PCSK1N9585.141ENSHGLG00000002975PCSK1N10084.733Heterocephalus_glaber_female
ENSG00000102109PCSK1N10088.123ENSSTOG00000025546PCSK1N10087.739Ictidomys_tridecemlineatus
ENSG00000102109PCSK1N10085.115ENSJJAG00000000165Pcsk1n10085.115Jaculus_jaculus
ENSG00000102109PCSK1N10069.847ENSLAFG00000030200PCSK1N10069.084Loxodonta_africana
ENSG00000102109PCSK1N8697.321ENSMFAG00000039428PCSK1N8597.321Macaca_fascicularis
ENSG00000102109PCSK1N8897.817ENSMMUG00000016469PCSK1N9697.321Macaca_mulatta
ENSG00000102109PCSK1N10097.318ENSMNEG00000035990PCSK1N10097.318Macaca_nemestrina
ENSG00000102109PCSK1N10085.000ENSMAUG00000015797Pcsk1n10085.000Mesocricetus_auratus
ENSG00000102109PCSK1N10086.923ENSMICG00000030219PCSK1N10086.923Microcebus_murinus
ENSG00000102109PCSK1N10083.077ENSMOCG00000016403Pcsk1n10083.077Microtus_ochrogaster
ENSG00000102109PCSK1N10081.923MGP_CAROLIEiJ_G0032906Pcsk1n10083.846Mus_caroli
ENSG00000102109PCSK1N10081.538ENSMUSG00000039278Pcsk1n10083.462Mus_musculus
ENSG00000102109PCSK1N10081.538MGP_PahariEiJ_G0031455Pcsk1n10083.462Mus_pahari
ENSG00000102109PCSK1N10081.154MGP_SPRETEiJ_G0034055Pcsk1n10083.077Mus_spretus
ENSG00000102109PCSK1N10085.385ENSMPUG00000013669PCSK1N10085.385Mustela_putorius_furo
ENSG00000102109PCSK1N7475.879ENSMLUG00000009125PCSK1N10073.737Myotis_lucifugus
ENSG00000102109PCSK1N9985.769ENSNGAG00000014688Pcsk1n9985.769Nannospalax_galili
ENSG00000102109PCSK1N10098.077ENSNLEG00000007899PCSK1N10098.077Nomascus_leucogenys
ENSG00000102109PCSK1N9180.508ENSOPRG00000012443PCSK1N9980.426Ochotona_princeps
ENSG00000102109PCSK1N10084.291ENSODEG00000010528PCSK1N10084.291Octodon_degus
ENSG00000102109PCSK1N9078.632ENSOCUG00000009021PCSK1N10077.308Oryctolagus_cuniculus
ENSG00000102109PCSK1N10088.462ENSOGAG00000034785PCSK1N10088.462Otolemur_garnettii
ENSG00000102109PCSK1N8586.486ENSOARG00000011670PCSK1N10086.486Ovis_aries
ENSG00000102109PCSK1N8599.550ENSPPAG00000034344PCSK1N10099.550Pan_paniscus
ENSG00000102109PCSK1N10083.462ENSPPRG00000010202PCSK1N10086.154Panthera_pardus
ENSG00000102109PCSK1N100100.000ENSPTRG00000049734PCSK1N100100.000Pan_troglodytes
ENSG00000102109PCSK1N10097.318ENSPANG00000015256PCSK1N10097.318Papio_anubis
ENSG00000102109PCSK1N10086.538ENSPEMG00000017215Pcsk1n10086.538Peromyscus_maniculatus_bairdii
ENSG00000102109PCSK1N10099.231ENSPPYG00000020322PCSK1N10099.231Pongo_abelii
ENSG00000102109PCSK1N10091.154ENSPCOG00000012912PCSK1N10091.154Propithecus_coquereli
ENSG00000102109PCSK1N10083.846ENSPVAG00000007642PCSK1N10083.846Pteropus_vampyrus
ENSG00000102109PCSK1N10084.231ENSRNOG00000007112Pcsk1n10084.231Rattus_norvegicus
ENSG00000102109PCSK1N10084.231ENSRNOG00000046021LOC10834817210084.231Rattus_norvegicus
ENSG00000102109PCSK1N8992.672ENSRBIG00000033130PCSK1N9992.672Rhinopithecus_bieti
ENSG00000102109PCSK1N8597.297ENSRROG00000042291PCSK1N9597.297Rhinopithecus_roxellana
ENSG00000102109PCSK1N10096.538ENSSBOG00000035004PCSK1N10096.538Saimiri_boliviensis_boliviensis
ENSG00000102109PCSK1N9988.803ENSSSCG00000021328PCSK1N10088.803Sus_scrofa
ENSG00000102109PCSK1N6787.356ENSTBEG00000011240PCSK1N7189.655Tupaia_belangeri
ENSG00000102109PCSK1N8589.140ENSTTRG00000004727PCSK1N10089.140Tursiops_truncatus
ENSG00000102109PCSK1N8666.368ENSVVUG00000017773PCSK1N7066.368Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0002021response to dietary excess-IEAProcess
GO:0004866endopeptidase inhibitor activity21873635.IBAFunction
GO:0004867serine-type endopeptidase inhibitor activity-IEAFunction
GO:0005102signaling receptor binding10632593.TASFunction
GO:0005615extracellular space21873635.IBAComponent
GO:0005802trans-Golgi network-IEAComponent
GO:0007218neuropeptide signaling pathway-IEAProcess
GO:0009409response to cold-IEAProcess
GO:0010951negative regulation of endopeptidase activity-IEAProcess
GO:0016486peptide hormone processing-IEAProcess
GO:0030141secretory granule-IEAComponent
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