EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
30241046PIG11 over-expression predicts good prognosis and induces HepG2 cell apoptosis via reactive oxygen species-dependent mitochondrial pathway.Biomed Pharmacother2018 DecWang Ydoi: 10.1016/j.biopha.2018.09.062
17029639Evaluation of NTHL1, NEIL1, NEIL2, MPG, TDG, UNG and SMUG1 genes in familial colorectal cancer predisposition.BMC Cancer2006 Oct 9Broderick P-
22266085Elevated N3-methylpurine-DNA glycosylase DNA repair activity is associated with lung cancer.Mutat Res2012 Apr 1Crosbie PAdoi: 10.1016/j.mrfmmm.2012.01.001
25355292Enzymatic MPG DNA repair assays for two different oxidative DNA lesions reveal associations with increased lung cancer risk.Carcinogenesis2014 DecLeitner-Dagan Ydoi: 10.1093/carcin/bgu214
23537643Identification of UHRF1/2 as new N-methylpurine DNA glycosylase-interacting proteins.Biochem Biophys Res Commun2013 Apr 19Liang Cdoi: 10.1016/j.bbrc.2013.02.126

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1685485Missense_MutationnovelK202R0.07
BLCAchr1683070Missense_MutationnovelP112S0.1
BLCAchr1685662Missense_Mutationrs774213821R261Q0.36
BRCAchr1683088Nonsense_Mutationrs199655862R118*0.09
BRCAchr1683163Frame_Shift_InsNAR145Pfs*880.35
BRCAchr1679525Missense_MutationNAS47T0.24
BRCAchr1685463Nonsense_MutationNAQ195*0.12
BRCAchr1683186SilentNAF150F0.33
BRCAchr1683094Missense_Mutationrs2308313R120C0.12
CESCchr1679584Frame_Shift_InsnovelT67Nfs*420.15
CESCchr1685757Missense_MutationnovelE293K0.57
COADchr1685640Missense_MutationnovelP254S0.32
COADchr16792255'UTRnovel0.19
COADchr1679300Frame_Shift_DelNAA5Lfs*40.15
COADchr1685405Silentrs751887856D175D0.37
COADchr1679563Missense_Mutationrs61753368R60C0.33
COADchr1679684Missense_MutationnovelR100Q0.08
COADchr1685616Missense_MutationnovelR246C0.14
COADchr1685520Missense_MutationNAL214F0.25
ESCAchr1685446Missense_MutationnovelG189D0.54
ESCAchr1685511Missense_MutationnovelD211N0.2
GBMchr1683089Missense_Mutationrs201536549R118Q0.26
GBMchr1685671Missense_MutationnovelV264A0.26
HNSCchr16792695'UTRnovel0.36
KIRCchr1683208Missense_Mutationrs562548652V158M0.38
KIRPchr1685676Missense_MutationnovelH266N0.67
LGGchr1683123SilentnovelG129G0.35
LGGchr1683124Missense_MutationnovelP130S0.4
LIHCchr1679607Missense_MutationnovelI74M0.28
OVchr1685511Missense_MutationNAD211Y0.97
OVchr1685507SilentNAL209L0.77
OVchr1683077Missense_MutationnovelG114D0.69
READchr1683134Missense_MutationnovelE133A0.21
READchr16792535'UTRrs3681963380.38
SKCMchr1679528Missense_MutationNAS48L0.3
SKCMchr1685717SilentnovelV279V0.42
SKCMchr1685718Missense_Mutationrs566736218R280W0.41
STADchr1685494Missense_MutationNAA205D0.43
STADchr1679487Silentrs754765496S34S0.27
STADchr1683170Missense_Mutationrs764172082R145H0.31
STADchr1685515Missense_Mutationrs142373562R212H0.14
STADchr1679491Missense_Mutationrs373341989D36N0.17
STADchr1679444Frame_Shift_DelnovelK21Rfs*870.18
STADchr1679445Missense_MutationnovelQ20H0.18
UCECchr1679692SilentNAL103L0.27
UCECchr1685455Missense_MutationnovelT192I0.13
UCECchr16792685'UTRnovel0.31
UCECchr1679666Missense_Mutationrs772837868P94L0.5
UCECchr1683194Missense_MutationnovelP153Q0.22
UCECchr1679305Missense_Mutationrs112187829A5T0.53
UCECchr1679533Missense_Mutationrs112910924D50N0.38
UCECchr1679306Missense_MutationnovelA5D0.51
UCECchr1683089Missense_Mutationrs201536549R118Q0.25
UCECchr1679305Missense_Mutationrs112187829A5T0.15
UCECchr1679588Missense_Mutationrs761403424P68L0.1
UCECchr1679497Missense_MutationNAA38T0.11
UCECchr1679434Missense_Mutationrs560374683R17W0.38
UCECchr1685500Missense_Mutationrs759578895R207H0.41
UCECchr1685717SilentnovelV279V0.59
UCSchr1679448Missense_MutationnovelK21N0.25

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCAMP0.52220.22898
CHOLDEL0.11110.23475
ESCADEL0.2880.012791
LUADDEL0.13180.1886
UCSDEL0.50.13407

Survival Analysis
CancerP-value Q-value
KIRC0.0001

Kaplan-Meier Survival Analysis

STAD0.0078

Kaplan-Meier Survival Analysis

SARC0.008

Kaplan-Meier Survival Analysis

MESO0.037

Kaplan-Meier Survival Analysis

HNSC0.042

Kaplan-Meier Survival Analysis

PAAD0.037

Kaplan-Meier Survival Analysis

LAML0.0054

Kaplan-Meier Survival Analysis

UCEC0.00097

Kaplan-Meier Survival Analysis

LIHC0.045

Kaplan-Meier Survival Analysis

THCA0.035

Kaplan-Meier Survival Analysis

UVM0.0002

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000103152 (Gene tree)
Gene ID
4350
Gene Symbol
MPG
Alias
MDG
Full Name
N-methylpurine DNA glycosylase
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
8,847 bases
Position
chr16:77,007-85,853
Accession
7211
RBP type
non-canonical RBP
Summary
(N-Methylpurine DNA Glycosylase) is a Protein Coding gene. Among its related pathways are Recognition and association of DNA glycosylase with site containing an affected purine and Telomere C-strand (Lagging Strand) Synthesis. Gene Ontology (GO) annotations related to this gene include damaged DNA binding and DNA-3-methyladenine glycosylase activity.
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
14702295The trp RNA-binding attenuation protein of Bacillus subtilis regulates translation of the tryptophan transport gene trpP (yhaG) by blocking ribosome binding.J Bacteriol2004 JanYakhnin H-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000219431MPG-2011193XM_024450282ENSP00000219431298 (aa)XP_024306050P29372
ENST00000475280MPG-205510--- (aa)--
ENST00000356432MPG-2021205-ENSP00000348809293 (aa)-P29372
ENST00000397817MPG-2031039-ENSP00000380918281 (aa)-P29372
ENST00000436333MPG-204884-ENSP00000388097251 (aa)-A2IDA3
Gene Model
Click here to download ENSG00000103152's gene model file
Pathways
Pathway IDPathway NameSource
hsa03410Base excision repairKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000103152's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000103152MPG9874.564ENSMUSG00000020287Mpg7480.800Mus_musculus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003684damaged DNA binding10854423.TASFunction
GO:0003905alkylbase DNA N-glycosylase activity21873635.IBAFunction
GO:0005515protein binding18482256.25416956.IPIFunction
GO:0005654nucleoplasm-TASComponent
GO:0006284base-excision repair21873635.IBAProcess
GO:0006307DNA dealkylation involved in DNA repair1645538.TASProcess
GO:0008725DNA-3-methyladenine glycosylase activity-IEAFunction
GO:0019104DNA N-glycosylase activity-TASFunction
GO:0042645mitochondrial nucleoid-IEAComponent
GO:0043916DNA-7-methylguanine glycosylase activity-IEAFunction
GO:0045007depurination-TASProcess
GO:0052821DNA-7-methyladenine glycosylase activity-IEAFunction
GO:0052822DNA-3-methylguanine glycosylase activity-IEAFunction
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