EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
ACC	chr7	128314902	Missense_Mutation	novel	P636L	0.35
BLCA	chr7	128314878	Missense_Mutation	novel	S644C	0.26
BLCA	chr7	128321263	Splice_Region	novel		0.2
BLCA	chr7	128343753	Missense_Mutation	novel	S14L	0.17
BLCA	chr7	128321406	Missense_Mutation	NA	Q475E	0.33
BLCA	chr7	128313253	Silent	novel	V689V	0.29
BLCA	chr7	128338306	Missense_Mutation	NA	K162R	0.28
BLCA	chr7	128325818	Splice_Region	novel	E401E	0.11
BLCA	chr7	128338335	Silent	NA	K152K	0.22
BRCA	chr7	128335902	Missense_Mutation	NA	E252K	0.33
BRCA	chr7	128310910	Nonsense_Mutation	novel	G723*	0.1
BRCA	chr7	128335601	Silent	novel	I296I	0.08
BRCA	chr7	128310825	Missense_Mutation	novel	A751E	0.07
BRCA	chr7	128343826	5'UTR	rs776802497		0.23
BRCA	chr7	128335880	Missense_Mutation	NA	S259L	0.26
BRCA	chr7	128343753	Missense_Mutation	novel	S14W	0.53
BRCA	chr7	128323576	Missense_Mutation	rs145208220	T452M	0.3
CESC	chr7	128335945	Silent	NA	D237D	0.12
CESC	chr7	128338780	Missense_Mutation	novel	T132P	0.2	RRM_1
CESC	chr7	128338249	Splice_Site	novel	X181_splice	0.38
CESC	chr7	128343867	5'UTR	novel		0.29
CESC	chr7	128336006	Missense_Mutation	novel	S217L	0.35
CESC	chr7	128330900	Missense_Mutation	novel	E350Q	0.16
COAD	chr7	128314949	Silent	NA	Q620Q	0.35
COAD	chr7	128321342	Missense_Mutation	NA	K496R	0.23
COAD	chr7	128339750	Missense_Mutation	rs548440684	M54V	0.29
COAD	chr7	128339281	Frame_Shift_Del	NA	*A107Pfs10**	0.32
COAD	chr7	128321383	Silent	rs755061584	I482I	0.17
COAD	chr7	128325891	Missense_Mutation	NA	G377A	0.39
COAD	chr7	128343895	5'UTR	novel		0.43
COAD	chr7	128335975	Silent	novel	D227D	0.33
COAD	chr7	128318055	Missense_Mutation	rs543277007	S539T	0.29
COAD	chr7	128315014	Frame_Shift_Del	NA	M599*	0.1
COAD	chr7	128310917	Frame_Shift_Del	novel	*A721Lfs69**	0.13
COAD	chr7	128315014	Frame_Shift_Del	NA	M599*	0.39
COAD	chr7	128335610	Silent	NA	S293S	0.12
COAD	chr7	128333293	Missense_Mutation	novel	I339T	0.36
COAD	chr7	128335956	Missense_Mutation	rs369500252	D234N	0.26
GBM	chr7	128310726	3'UTR	novel		0.13
GBM	chr7	128314795	Missense_Mutation	novel	A672T	0.31
GBM	chr7	128321406	Nonsense_Mutation	novel	Q475*	0.19
GBM	chr7	128317719	Silent	rs765780383	E576E	0.35
GBM	chr7	128335654	Missense_Mutation	novel	K279E	0.18
GBM	chr7	128310630	3'UTR	novel		0.78
GBM	chr7	128310863	Missense_Mutation	novel	K738N	0.72
GBM	chr7	128324613	Missense_Mutation	novel	T429A	0.19
GBM	chr7	128310616	3'UTR	novel		0.25
GBM	chr7	128321352	Missense_Mutation	novel	N493D	0.05
GBM	chr7	128310639	3'UTR	novel		0.75
GBM	chr7	128338250	Missense_Mutation	novel	G181C	0.1
HNSC	chr7	128325829	Missense_Mutation	novel	P398S	0.11
HNSC	chr7	128321406	Missense_Mutation	NA	Q475E	0.12
HNSC	chr7	128324608	Missense_Mutation	novel	K430N	0.11
HNSC	chr7	128335577	Missense_Mutation	novel	Q304H	0.11
HNSC	chr7	128317703	Nonsense_Mutation	rs770885287	R582*	0.13
KIRC	chr7	128324611	Silent	NA	T429T	0.26
KIRC	chr7	128335541	Splice_Site	NA	X316_splice	0.18
KIRC	chr7	128338266	Missense_Mutation	NA	N175K	0.25
KIRC	chr7	128321316	Nonsense_Mutation	NA	K505*	0.15
KIRC	chr7	128325874	Missense_Mutation	NA	F383V	0.23
KIRC	chr7	128339760	Silent	NA	V50V	0.3
KIRP	chr7	128318057	In_Frame_Ins	novel	G537_Q538insR	0.27
LGG	chr7	128325826	Nonsense_Mutation	novel	E399*	0.21
LGG	chr7	128330894	Missense_Mutation	rs781569084	G352R	0.34
LIHC	chr7	128338296	Silent	NA	L165L	0.41
LIHC	chr7	128325815	Splice_Region	novel		0.25
LIHC	chr7	128324567	Missense_Mutation	novel	R444L	0.33
LIHC	chr7	128339286	Missense_Mutation	novel	K105E	0.23
LUAD	chr7	128324611	Silent	novel	T429T	0.08
LUAD	chr7	128310736	3'UTR	novel		0.14
LUAD	chr7	128314822	Missense_Mutation	rs761737836	D663H	0.2
LUAD	chr7	128330891	Missense_Mutation	NA	E353K	0.09
LUAD	chr7	128321326	Frame_Shift_Del	novel	*K496Tfs11**	0.19
LUAD	chr7	128324567	Missense_Mutation	novel	R444L	0.25
LUSC	chr7	128314775	Silent	novel	G678G	0.28
LUSC	chr7	128330893	Missense_Mutation	novel	G352V	0.14
LUSC	chr7	128318088	Missense_Mutation	novel	L528V	0.43
LUSC	chr7	128321327	Missense_Mutation	rs757103148	K501R	0.72
LUSC	chr7	128336004	Missense_Mutation	novel	V218I	0.13
LUSC	chr7	128339309	Missense_Mutation	novel	C97S	0.12
OV	chr7	128321317	Silent	novel	R504R	0.05
OV	chr7	128325851	Missense_Mutation	NA	Q390H	0.22
OV	chr7	128310905	Silent	novel	N724N	0.07
OV	chr7	128310585	3'UTR	novel		0.72
OV	chr7	128310905	Frame_Shift_Ins	novel	*N724Kfs2**	0.2
OV	chr7	128335933	Silent	novel	D241D	0.04
OV	chr7	128313257	Missense_Mutation	NA	K688R	0.14
OV	chr7	128330861	Missense_Mutation	NA	Y363D	0.3
OV	chr7	128310639	3'UTR	novel		0.27
OV	chr7	128310801	Missense_Mutation	novel	S759T	0.06
OV	chr7	128314835	Missense_Mutation	novel	Q658H	0.04
PAAD	chr7	128314780	Nonsense_Mutation	rs781302150	R677*	0.14
PAAD	chr7	128330855	Missense_Mutation	rs760285523	R365C	0.18
PAAD	chr7	128335566	Missense_Mutation	novel	S308N	0.2
PAAD	chr7	128338328	Missense_Mutation	novel	G155S	0.13
PAAD	chr7	128335942	Silent	NA	D238D	0.21
PAAD	chr7	128323582	Frame_Shift_Del	novel	*I448Wfs12**	0.05
PRAD	chr7	128339687	Missense_Mutation	rs778159238	V75M	0.32
READ	chr7	128330870	Nonsense_Mutation	novel	E360*	0.4
READ	chr7	128313247	Silent	rs770210501	P691P	0.21
READ	chr7	128310497	3'UTR	novel		0.38
SARC	chr7	128310868	Frame_Shift_Del	novel	*Y737Ifs53**	0.16
SARC	chr7	128339282	Missense_Mutation	novel	K106T	0.34
SKCM	chr7	128336042	Missense_Mutation	rs757954490	G205D	0.51
SKCM	chr7	128314774	Missense_Mutation	NA	P679S	0.23
SKCM	chr7	128330839	Missense_Mutation	NA	P370L	0.12
SKCM	chr7	128333326	Missense_Mutation	rs551832928	P328L	0.16
SKCM	chr7	128335930	Missense_Mutation	novel	E242D	0.11
SKCM	chr7	128321374	Silent	novel	S485S	0.06
SKCM	chr7	128310893	Silent	rs769481129	T728T	0.26
SKCM	chr7	128339281	Frame_Shift_Del	NA	*A107Pfs10**	0.32
SKCM	chr7	128313181	Silent	rs202000898	S713S	0.2
SKCM	chr7	128317998	Missense_Mutation	rs751906113	R558C	0.32
SKCM	chr7	128317999	Silent	novel	L557L	0.34
SKCM	chr7	128318029	Silent	NA	F547F	0.2
SKCM	chr7	128339243	Missense_Mutation	rs190091775	R119Q	0.47	RRM_1
STAD	chr7	128313180	Missense_Mutation	NA	E714K	0.08
STAD	chr7	128333294	Frame_Shift_Ins	novel	*I339Yfs7**	0.36
STAD	chr7	128313269	Missense_Mutation	rs746002917	R684Q	0.28
STAD	chr7	128338306	Missense_Mutation	NA	K162R	0.29
STAD	chr7	128338273	Missense_Mutation	NA	G173D	0.34
STAD	chr7	128314951	Nonsense_Mutation	NA	Q620*	0.19
STAD	chr7	128310895	Missense_Mutation	NA	T728A	0.3
STAD	chr7	128315002	Missense_Mutation	novel	P603T	0.14
STAD	chr7	128324611	Silent	NA	T429T	0.11
THCA	chr7	128333355	In_Frame_Ins	novel	V319_S320insTELV	0.07
UCEC	chr7	128313205	Silent	rs779123994	K705K	0.09
UCEC	chr7	128343799	5'UTR	rs753677419		0.1
UCEC	chr7	128310702	3'UTR	novel		0.4
UCEC	chr7	128318093	Missense_Mutation	NA	R526Q	0.2
UCEC	chr7	128323585	Missense_Mutation	NA	R449H	0.15
UCEC	chr7	128310527	3'UTR	novel		0.25
UCEC	chr7	128338328	Missense_Mutation	novel	G155S	0.37
UCEC	chr7	128323529	Missense_Mutation	rs145972885	R468W	0.43
UCEC	chr7	128313269	Missense_Mutation	rs746002917	R684Q	0.43
UCEC	chr7	128310416	3'UTR	novel		0.36
UCEC	chr7	128325877	Nonsense_Mutation	NA	Q382*	0.14
UCEC	chr7	128315014	Frame_Shift_Del	NA	M599*	0.21
UCEC	chr7	128335957	Silent	rs751620358	N233N	0.05
UCEC	chr7	128338331	Missense_Mutation	NA	R154C	0.26
UCEC	chr7	128317689	Missense_Mutation	novel	K586N	0.32
UCEC	chr7	128330870	Nonsense_Mutation	novel	E360*	0.61
UCEC	chr7	128339721	Silent	novel	K63K	0.34
UCEC	chr7	128310404	3'UTR	novel		0.25
UCEC	chr7	128318043	Missense_Mutation	novel	A543T	0.16
UCEC	chr7	128310900	Missense_Mutation	rs376787376	T726M	0.35
UCEC	chr7	128335956	Missense_Mutation	rs369500252	D234N	0.35
UCEC	chr7	128325815	Splice_Region	NA		0.4
UCEC	chr7	128318034	Missense_Mutation	novel	E546K	0.05
UCEC	chr7	128335956	Missense_Mutation	rs369500252	D234N	0.21
UCEC	chr7	128343781	Missense_Mutation	novel	T5P	0.18
UCEC	chr7	128314793	Silent	rs749555599	A672A	0.37
UCEC	chr7	128333342	Missense_Mutation	novel	K323Q	0.26
UCEC	chr7	128310643	3'UTR	novel		0.32
UCEC	chr7	128330870	Missense_Mutation	novel	E360K	0.32
UCEC	chr7	128339243	Missense_Mutation	rs190091775	R119Q	0.31	RRM_1
UCEC	chr7	128314884	Missense_Mutation	rs140126189	A642V	0.34
UCEC	chr7	128314883	Silent	rs774538894	A642A	0.29
UCEC	chr7	128338274	Missense_Mutation	novel	G173C	0.35
UCEC	chr7	128339631	Splice_Site	novel	X93_splice	0.21
UCEC	chr7	128310731	3'UTR	novel		0.44
UCEC	chr7	128310874	Missense_Mutation	rs757896814	E735K	0.38
UCEC	chr7	128314884	Missense_Mutation	rs140126189	A642V	0.19
UCEC	chr7	128317703	Nonsense_Mutation	rs770885287	R582*	0.45
UCEC	chr7	128317985	Missense_Mutation	rs776119154	N562S	0.2
UCEC	chr7	128324597	Missense_Mutation	rs142762468	P434L	0.23
UCEC	chr7	128330858	Missense_Mutation	novel	V364I	0.15
UCEC	chr7	128313236	Missense_Mutation	novel	K695T	0.44
UCEC	chr7	128321267	Missense_Mutation	novel	E521V	0.05
UCEC	chr7	128310596	3'UTR	novel		0.17
UCEC	chr7	128335609	Missense_Mutation	novel	D294N	0.08
UCEC	chr7	128335933	Missense_Mutation	novel	D241E	0.07
UCS	chr7	128318035	Silent	NA	A545A	0.33

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
ACC	DEL	0.0778	0.12261
CESC	DEL	0.1661	0.0016147
DLBC	DEL	0.1042	0.03486
KIRC	AMP	0.2822	0.075418
LAML	DEL	0.1257	3.4101e-05
LGG	AMP	0.3138	1.5525e-07
LIHC	DEL	0.0784	0.24831
PAAD	DEL	0.0652	0.049388
TGCT	DEL	0.0467	0.11738
THCA	DEL	0	0.27619
UCEC	DEL	0.0946	0.0001859
UCS	DEL	0.2857	0.10142

Survival Analysis

Cancer	P-value	Q-value
KIRC	0.0013	Kaplan-Meier Survival Analysis
STAD	0.0096	Kaplan-Meier Survival Analysis
MESO	0.00059	Kaplan-Meier Survival Analysis
SKCM	0.011	Kaplan-Meier Survival Analysis
PRAD	0.0067	Kaplan-Meier Survival Analysis
PAAD	0.05	Kaplan-Meier Survival Analysis
LAML	0.00075	Kaplan-Meier Survival Analysis
KICH	0.0017	Kaplan-Meier Survival Analysis
UCEC	0.001	Kaplan-Meier Survival Analysis
LIHC	0.00012	Kaplan-Meier Survival Analysis
DLBC	0.042	Kaplan-Meier Survival Analysis
LGG	0.008	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Pathways

Phenotypes

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000106344 (Gene tree)
Gene ID: 55131
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 46,229 bases
Position: chr7:128,297,685-128,343,913
Accession: 21863
RBP type: canonical RBP
Summary: The protein encoded by this gene is a specific nucleolar component of the spliceosomal small nuclear ribonucleoprotein (snRNP)complexes . It specifically associates with U1, U2, U4, U5, and U6 small nuclear RNAs (snRNAs), possibly coordinating their transition through the nucleolus. Mutation in this gene causes alopecia, progressive neurological defects, and endocrinopathy (ANE syndrome), a pleiotropic and clinically heterogeneous disorder. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2009]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000223073	RRM_1	PF00076.22	5.1e-56	1	3
ENSP00000223073	RRM_1	PF00076.22	5.1e-56	2	3
ENSP00000223073	RRM_1	PF00076.22	5.1e-56	3	3
ENSP00000390517	RRM_1	PF00076.22	3.1e-28	1	2
ENSP00000390517	RRM_1	PF00076.22	3.1e-28	2	2
ENSP00000420503	RRM_1	PF00076.22	5.7e-28	1	2
ENSP00000420503	RRM_1	PF00076.22	5.7e-28	2	2
ENSP00000418071	RRM_1	PF00076.22	1.7e-23	1	2
ENSP00000418071	RRM_1	PF00076.22	1.7e-23	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	NascentRICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
25939713	RBM28, a protein deficient in ANE syndrome, regulates hair follicle growth via miR-203 and p63.	Exp Dermatol	2015 Aug	Warshauer E	doi: 10.1111/exd.12737
20937268	Regulation of lin-4 miRNA expression, organismal growth and development by a conserved RNA binding protein in C. elegans.	Dev Biol	2010 Dec 15	Bracht JR	doi: 10.1016/j.ydbio.2010.10.003
28793857	Mapping of leptin and its syntenic genes to chicken chromosome 1p.	BMC Genet	2017 Aug 9	Seroussi E	doi: 10.1186/s12863-017-0543-1.

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000488249	RBM28-207	570	-	-	- (aa)	-	-
ENST00000495327	RBM28-208	395	-	-	- (aa)	-	-
ENST00000487602	RBM28-206	715	-	ENSP00000419840	186 (aa)	-	H7C5G8
ENST00000415472	RBM28-202	2251	-	ENSP00000390517	618 (aa)	-	Q9NW13
ENST00000481788	RBM28-205	1052	-	-	- (aa)	-	-
ENST00000459726	RBM28-203	728	-	ENSP00000420503	204 (aa)	-	C9JE21
ENST00000478061	RBM28-204	932	-	ENSP00000418071	283 (aa)	-	C9JAA9
ENST00000223073	RBM28-201	15507	XM_011516370	ENSP00000223073	759 (aa)	XP_011514672	Q9NW13

Gene Model

Click here to download ENSG00000106344's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03008	Ribosome biogenesis in eukaryotes	KEGG

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000106344	Blood Vessels	7.951e-005	-
ENSG00000106344	Blood Vessels	8.932e-005	-
ENSG00000106344	Blood Vessels	8.932e-005	-

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000106344's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000106344	RBM28	98	30.827	ENSG00000070756	PABPC1	89	41.667
ENSG00000106344	RBM28	64	31.061	ENSG00000151846	PABPC3	55	30.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000106344	RBM28	100	50.000	ENSAPOG00000015512	rbm28	100	51.154	Acanthochromis_polyacanthus
ENSG00000106344	RBM28	100	97.500	ENSAMEG00000004776	RBM28	92	93.478	Ailuropoda_melanoleuca
ENSG00000106344	RBM28	68	55.238	ENSACIG00000023153	rbm28	100	51.566	Amphilophus_citrinellus
ENSG00000106344	RBM28	58	43.802	ENSACIG00000023163	-	99	62.069	Amphilophus_citrinellus
ENSG00000106344	RBM28	100	49.510	ENSAOCG00000000462	rbm28	100	51.253	Amphiprion_ocellaris
ENSG00000106344	RBM28	100	50.000	ENSAPEG00000012996	rbm28	100	51.314	Amphiprion_percula
ENSG00000106344	RBM28	100	48.529	ENSATEG00000001672	rbm28	72	65.000	Anabas_testudineus
ENSG00000106344	RBM28	57	60.684	ENSACAG00000013153	-	98	50.269	Anolis_carolinensis
ENSG00000106344	RBM28	100	100.000	ENSANAG00000033922	RBM28	100	93.289	Aotus_nancymaae
ENSG00000106344	RBM28	100	52.632	ENSACLG00000025024	rbm28	100	48.730	Astatotilapia_calliptera
ENSG00000106344	RBM28	71	58.864	ENSAMXG00000000763	rbm28	99	59.284	Astyanax_mexicanus
ENSG00000106344	RBM28	57	46.552	ENSAMXG00000043026	-	85	65.854	Astyanax_mexicanus
ENSG00000106344	RBM28	100	84.100	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSG00000106344	RBM28	100	100.000	ENSCJAG00000017731	RBM28	100	92.773	Callithrix_jacchus
ENSG00000106344	RBM28	100	95.000	ENSCAFG00000001667	RBM28	100	85.151	Canis_familiaris
ENSG00000106344	RBM28	100	95.000	ENSCAFG00020021648	RBM28	100	85.151	Canis_lupus_dingo
ENSG00000106344	RBM28	100	100.000	ENSCHIG00000014146	RBM28	100	84.363	Capra_hircus
ENSG00000106344	RBM28	100	85.733	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSG00000106344	RBM28	84	61.755	ENSCAPG00000013218	RBM28	100	61.599	Cavia_aperea
ENSG00000106344	RBM28	100	95.000	ENSCPOG00000006253	RBM28	100	83.574	Cavia_porcellus
ENSG00000106344	RBM28	100	100.000	ENSCCAG00000035105	RBM28	100	93.553	Cebus_capucinus
ENSG00000106344	RBM28	100	97.500	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSG00000106344	RBM28	100	80.158	ENSCLAG00000003707	RBM28	90	95.000	Chinchilla_lanigera
ENSG00000106344	RBM28	100	100.000	ENSCSAG00000010161	RBM28	100	96.316	Chlorocebus_sabaeus
ENSG00000106344	RBM28	56	100.000	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSG00000106344	RBM28	62	62.187	ENSCPBG00000018088	RBM28	87	60.300	Chrysemys_picta_bellii
ENSG00000106344	RBM28	73	41.955	ENSCING00000009238	-	58	41.571	Ciona_intestinalis
ENSG00000106344	RBM28	54	43.768	ENSCSAVG00000007149	-	94	43.491	Ciona_savignyi
ENSG00000106344	RBM28	88	100.000	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSG00000106344	RBM28	87	100.000	ENSCGRG00001021278	Rbm28	82	100.000	Cricetulus_griseus_chok1gshd
ENSG00000106344	RBM28	100	100.000	ENSCGRG00000005098	Rbm28	82	100.000	Cricetulus_griseus_crigri
ENSG00000106344	RBM28	100	47.549	ENSCSEG00000004212	rbm28	100	49.301	Cynoglossus_semilaevis
ENSG00000106344	RBM28	100	48.529	ENSCVAG00000010493	rbm28	82	65.000	Cyprinodon_variegatus
ENSG00000106344	RBM28	100	72.414	ENSDARG00000025332	rbm28	100	46.753	Danio_rerio
ENSG00000106344	RBM28	100	100.000	ENSDNOG00000001124	RBM28	100	85.414	Dasypus_novemcinctus
ENSG00000106344	RBM28	79	82.056	ENSDORG00000004184	Rbm28	97	82.056	Dipodomys_ordii
ENSG00000106344	RBM28	62	70.635	ENSDORG00000028147	-	71	96.739	Dipodomys_ordii
ENSG00000106344	RBM28	100	73.039	ENSETEG00000007130	RBM28	99	71.671	Echinops_telfairi
ENSG00000106344	RBM28	98	39.000	ENSEBUG00000004419	rbm28	65	42.505	Eptatretus_burgeri
ENSG00000106344	RBM28	100	97.500	ENSEASG00005008528	RBM28	100	85.528	Equus_asinus_asinus
ENSG00000106344	RBM28	100	97.500	ENSECAG00000007745	RBM28	100	85.286	Equus_caballus
ENSG00000106344	RBM28	100	95.000	ENSEEUG00000002389	RBM28	82	95.000	Erinaceus_europaeus
ENSG00000106344	RBM28	100	62.500	ENSELUG00000020602	rbm28	100	52.399	Esox_lucius
ENSG00000106344	RBM28	100	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSG00000106344	RBM28	100	92.500	ENSFDAG00000010169	RBM28	100	85.677	Fukomys_damarensis
ENSG00000106344	RBM28	98	44.000	ENSGMOG00000007091	rbm28	75	50.000	Gadus_morhua
ENSG00000106344	RBM28	71	55.556	ENSGAFG00000004802	rbm28	97	54.846	Gambusia_affinis
ENSG00000106344	RBM28	55	41.964	ENSGAFG00000004817	-	96	62.069	Gambusia_affinis
ENSG00000106344	RBM28	100	46.569	ENSGACG00000012612	rbm28	82	52.410	Gasterosteus_aculeatus
ENSG00000106344	RBM28	100	57.353	ENSGAGG00000008873	RBM28	80	79.670	Gopherus_agassizii
ENSG00000106344	RBM28	98	97.268	ENSGGOG00000004644	RBM28	97	99.167	Gorilla_gorilla
ENSG00000106344	RBM28	100	50.490	ENSHBUG00000009611	rbm28	65	56.325	Haplochromis_burtoni
ENSG00000106344	RBM28	100	95.000	ENSHGLG00000005409	RBM28	100	85.283	Heterocephalus_glaber_female
ENSG00000106344	RBM28	100	95.000	ENSHGLG00100016458	RBM28	100	84.231	Heterocephalus_glaber_male
ENSG00000106344	RBM28	100	40.376	ENSHCOG00000010597	rbm28	78	42.344	Hippocampus_comes
ENSG00000106344	RBM28	57	46.552	ENSIPUG00000007127	-	92	62.637	Ictalurus_punctatus
ENSG00000106344	RBM28	78	45.417	ENSIPUG00000007103	rbm28	97	46.626	Ictalurus_punctatus
ENSG00000106344	RBM28	100	93.182	ENSSTOG00000002169	RBM28	100	85.770	Ictidomys_tridecemlineatus
ENSG00000106344	RBM28	96	97.500	ENSJJAG00000022400	Rbm28	80	97.500	Jaculus_jaculus
ENSG00000106344	RBM28	100	50.476	ENSKMAG00000013348	rbm28	69	67.500	Kryptolebias_marmoratus
ENSG00000106344	RBM28	100	47.393	ENSLBEG00000012998	rbm28	100	50.948	Labrus_bergylta
ENSG00000106344	RBM28	96	57.436	ENSLACG00000010485	-	100	56.690	Latimeria_chalumnae
ENSG00000106344	RBM28	87	70.000	ENSLOCG00000015541	rbm28	80	62.371	Lepisosteus_oculatus
ENSG00000106344	RBM28	100	100.000	ENSLAFG00000010717	RBM28	100	82.654	Loxodonta_africana
ENSG00000106344	RBM28	100	97.500	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSG00000106344	RBM28	100	97.500	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSG00000106344	RBM28	100	97.500	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSG00000106344	RBM28	98	91.304	ENSMLEG00000037717	RBM28	100	95.522	Mandrillus_leucophaeus
ENSG00000106344	RBM28	100	62.500	ENSMAMG00000008525	rbm28	100	50.444	Mastacembelus_armatus
ENSG00000106344	RBM28	73	53.263	ENSMZEG00005019625	rbm28	69	53.213	Maylandia_zebra
ENSG00000106344	RBM28	100	100.000	ENSMAUG00000002263	Rbm28	82	100.000	Mesocricetus_auratus
ENSG00000106344	RBM28	94	83.221	ENSMICG00000000107	RBM28	100	85.180	Microcebus_murinus
ENSG00000106344	RBM28	100	100.000	ENSMOCG00000014615	Rbm28	81	100.000	Microtus_ochrogaster
ENSG00000106344	RBM28	59	45.455	ENSMMOG00000008605	-	71	63.218	Mola_mola
ENSG00000106344	RBM28	70	54.483	ENSMMOG00000008600	rbm28	99	52.490	Mola_mola
ENSG00000106344	RBM28	100	87.500	ENSMODG00000015151	RBM28	100	73.177	Monodelphis_domestica
ENSG00000106344	RBM28	100	48.039	ENSMALG00000006419	rbm28	100	49.310	Monopterus_albus
ENSG00000106344	RBM28	100	97.500	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.971	Mus_caroli
ENSG00000106344	RBM28	100	97.500	ENSMUSG00000029701	Rbm28	100	80.577	Mus_musculus
ENSG00000106344	RBM28	100	97.500	MGP_PahariEiJ_G0021920	Rbm28	100	80.971	Mus_pahari
ENSG00000106344	RBM28	100	97.500	MGP_SPRETEiJ_G0029162	Rbm28	100	80.840	Mus_spretus
ENSG00000106344	RBM28	100	100.000	ENSMPUG00000006511	RBM28	100	83.486	Mustela_putorius_furo
ENSG00000106344	RBM28	100	100.000	ENSMLUG00000002186	RBM28	100	85.564	Myotis_lucifugus
ENSG00000106344	RBM28	100	100.000	ENSNGAG00000006480	-	81	100.000	Nannospalax_galili
ENSG00000106344	RBM28	100	92.500	ENSNGAG00000017946	-	100	78.449	Nannospalax_galili
ENSG00000106344	RBM28	59	43.333	ENSNBRG00000022844	-	86	60.465	Neolamprologus_brichardi
ENSG00000106344	RBM28	100	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSG00000106344	RBM28	81	87.500	ENSMEUG00000009611	RBM28	91	87.500	Notamacropus_eugenii
ENSG00000106344	RBM28	100	76.471	ENSOPRG00000015140	RBM28	90	76.996	Ochotona_princeps
ENSG00000106344	RBM28	100	80.026	ENSODEG00000003213	-	100	79.501	Octodon_degus
ENSG00000106344	RBM28	76	88.413	ENSODEG00000013217	-	83	88.413	Octodon_degus
ENSG00000106344	RBM28	100	49.510	ENSONIG00000014924	rbm28	100	50.000	Oreochromis_niloticus
ENSG00000106344	RBM28	87	81.463	ENSOANG00000000815	-	82	85.000	Ornithorhynchus_anatinus
ENSG00000106344	RBM28	100	100.000	ENSOCUG00000003009	RBM28	100	82.399	Oryctolagus_cuniculus
ENSG00000106344	RBM28	100	49.029	ENSORLG00000009636	rbm28	69	67.500	Oryzias_latipes
ENSG00000106344	RBM28	100	49.515	ENSORLG00020002123	rbm28	69	67.500	Oryzias_latipes_hni
ENSG00000106344	RBM28	100	49.761	ENSORLG00015015030	rbm28	97	60.784	Oryzias_latipes_hsok
ENSG00000106344	RBM28	100	49.758	ENSOMEG00000007801	rbm28	100	50.187	Oryzias_melastigma
ENSG00000106344	RBM28	100	84.430	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSG00000106344	RBM28	100	84.162	ENSOARG00000002547	RBM28	100	84.162	Ovis_aries
ENSG00000106344	RBM28	100	100.000	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSG00000106344	RBM28	100	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSG00000106344	RBM28	100	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSG00000106344	RBM28	100	100.000	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSG00000106344	RBM28	100	97.500	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSG00000106344	RBM28	99	57.500	ENSPKIG00000023453	rbm28	72	57.500	Paramormyrops_kingsleyae
ENSG00000106344	RBM28	100	48.309	ENSPMGG00000012840	rbm28	100	48.090	Periophthalmus_magnuspinnatus
ENSG00000106344	RBM28	96	100.000	ENSPEMG00000020673	Rbm28	81	100.000	Peromyscus_maniculatus_bairdii
ENSG00000106344	RBM28	58	45.337	ENSPMAG00000002948	-	99	46.543	Petromyzon_marinus
ENSG00000106344	RBM28	100	87.500	ENSPCIG00000012810	RBM28	100	71.932	Phascolarctos_cinereus
ENSG00000106344	RBM28	100	47.805	ENSPFOG00000018209	rbm28	100	49.114	Poecilia_formosa
ENSG00000106344	RBM28	100	48.293	ENSPLAG00000016078	rbm28	96	50.193	Poecilia_latipinna
ENSG00000106344	RBM28	100	46.829	ENSPMEG00000004292	rbm28	100	49.114	Poecilia_mexicana
ENSG00000106344	RBM28	100	46.569	ENSPREG00000014287	rbm28	98	48.575	Poecilia_reticulata
ENSG00000106344	RBM28	100	100.000	ENSPPYG00000017975	RBM28	100	99.209	Pongo_abelii
ENSG00000106344	RBM28	90	72.131	ENSPCAG00000008223	RBM28	83	75.556	Procavia_capensis
ENSG00000106344	RBM28	100	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSG00000106344	RBM28	100	76.471	ENSPVAG00000005443	RBM28	76	91.628	Pteropus_vampyrus
ENSG00000106344	RBM28	100	52.632	ENSPNYG00000014003	rbm28	72	52.632	Pundamilia_nyererei
ENSG00000106344	RBM28	55	43.750	ENSPNAG00000022784	-	95	62.637	Pygocentrus_nattereri
ENSG00000106344	RBM28	100	97.500	ENSRNOG00000005468	Rbm28	82	97.500	Rattus_norvegicus
ENSG00000106344	RBM28	100	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSG00000106344	RBM28	100	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSG00000106344	RBM28	82	100.000	ENSSBOG00000012308	RBM28	100	90.289	Saimiri_boliviensis_boliviensis
ENSG00000106344	RBM28	96	67.891	ENSSHAG00000017017	RBM28	99	67.292	Sarcophilus_harrisii
ENSG00000106344	RBM28	100	51.471	ENSSFOG00015001231	rbm28	75	62.500	Scleropages_formosus
ENSG00000106344	RBM28	70	52.968	ENSSMAG00000003885	rbm28	98	50.939	Scophthalmus_maximus
ENSG00000106344	RBM28	55	38.393	ENSSMAG00000003917	-	79	55.172	Scophthalmus_maximus
ENSG00000106344	RBM28	77	34.810	ENSSDUG00000014292	-	98	46.774	Seriola_dumerili
ENSG00000106344	RBM28	100	47.059	ENSSLDG00000020099	rbm28	100	50.510	Seriola_lalandi_dorsalis
ENSG00000106344	RBM28	100	70.588	ENSSARG00000008303	RBM28	81	85.464	Sorex_araneus
ENSG00000106344	RBM28	66	73.529	ENSSPUG00000000838	RBM28	79	73.529	Sphenodon_punctatus
ENSG00000106344	RBM28	70	53.319	ENSSPAG00000023305	rbm28	100	49.521	Stegastes_partitus
ENSG00000106344	RBM28	100	100.000	ENSSSCG00000031847	RBM28	100	85.151	Sus_scrofa
ENSG00000106344	RBM28	100	49.761	ENSTRUG00000013311	rbm28	82	65.000	Takifugu_rubripes
ENSG00000106344	RBM28	99	65.000	ENSTNIG00000017962	rbm28	99	51.100	Tetraodon_nigroviridis
ENSG00000106344	RBM28	86	87.870	ENSTBEG00000012749	RBM28	94	72.067	Tupaia_belangeri
ENSG00000106344	RBM28	100	100.000	ENSTTRG00000013647	RBM28	100	82.415	Tursiops_truncatus
ENSG00000106344	RBM28	100	100.000	ENSUAMG00000006949	RBM28	100	77.880	Ursus_americanus
ENSG00000106344	RBM28	100	85.283	ENSUMAG00000005997	RBM28	100	84.888	Ursus_maritimus
ENSG00000106344	RBM28	94	73.540	ENSVPAG00000008304	RBM28	87	76.312	Vicugna_pacos
ENSG00000106344	RBM28	100	95.000	ENSVVUG00000007270	RBM28	100	84.888	Vulpes_vulpes
ENSG00000106344	RBM28	99	67.500	ENSXETG00000009271	rbm28	99	56.371	Xenopus_tropicalis
ENSG00000106344	RBM28	55	41.964	ENSXCOG00000020358	-	96	62.069	Xiphophorus_couchianus
ENSG00000106344	RBM28	71	53.986	ENSXCOG00000020357	rbm28	99	52.201	Xiphophorus_couchianus
ENSG00000106344	RBM28	100	49.268	ENSXMAG00000004415	rbm28	82	67.500	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	IDA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component

EuRBPDB

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Pathways

Phenotypes

PPI

Paralogs

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.