EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
26265695Depletion of the chromatin remodeler CHD4 sensitizes AML blasts to genotoxic agents and reduces tumor formation.Blood2015 Sep 17Sperlazza Jdoi: 10.1182/blood-2015-03-631606
23708667The NuRD complex cooperates with DNMTs to maintain silencing of key colorectal tumor suppressor genes.Oncogene2014 Apr 24Cai Ydoi: 10.1038/onc.2013.178
25407497Association of the chromodomain helicase DNA-binding protein 4 (CHD4) missense variation p.D140E with cancer: potential interaction with smoking.Genes Chromosomes Cancer2015 FebYamada Mdoi: 10.1002/gcc.22227
29305962CHD4-mediated loss of E-cadherin determines metastatic ability in triple-negative breast cancer cells.Exp Cell Res2018 Feb 1Luo CWdoi: 10.1016/j.yexcr.2017.12.032
17694084The human Mi-2/NuRD complex and gene regulation.Oncogene2007 Aug 13Denslow SA-
25737278Resistance to therapy in BRCA2 mutant cells due to loss of the nucleosome remodeling factor CHD4.Genes Dev2015 Mar 1Guillemette Sdoi: 10.1101/gad.256214.114.
26095183Defeating EpCAM(+) liver cancer stem cells by targeting chromatin remodeling enzyme CHD4 in human hepatocellular carcinoma.J Hepatol2015 NovNio Kdoi: 10.1016/j.jhep.2015.06.009
27779108RNAi screens identify CHD4 as an essential gene in breast cancer growth.Oncotarget2016 Dec 6D'Alesio Cdoi: 10.18632/oncotarget.12646.

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr126570960Missense_MutationNAR1877Q0.12
BLCAchr126577820Missense_MutationNAE1776Q0.08
BLCAchr126599982Missense_MutationnovelE425Q0.23
BLCAchr126573208Nonsense_MutationnovelS1808*0.09
BLCAchr126591584Splice_SiteNAX1075_splice0.43
BLCAchr126598063Frame_Shift_DelnovelY574Sfs*430.29
BLCAchr126582149SilentnovelL1501L0.18
BLCAchr126583132Intronnovel0.14
BLCAchr126598012Missense_MutationnovelE592K0.06
BLCAchr126600303Missense_MutationnovelD386H0.11
BLCAchr126600939Missense_Mutationrs760698915R305H0.48
BLCAchr126581084SilentNAV1623V0.21
BLCAchr126593576Missense_MutationnovelS785C0.21ResIII
BLCAchr126598290Missense_MutationNAE540K0.54
BLCAchr126600274SilentnovelV395V0.29
BLCAchr126581709Missense_MutationNAP1541A0.22
BLCAchr126582943Splice_Regionnovel0.29
BLCAchr126583261Missense_MutationNAL1333V0.34
BLCAchr126582924Missense_MutationNAP1387L0.16
BLCAchr126583063Missense_MutationNAE1371Q0.21
BLCAchr126583363Missense_MutationNAE1299Q0.19
BLCAchr126582959Intronrs7681055980.18
BLCAchr126594518Missense_MutationnovelE752K0.2ResIII
BLCAchr126582247Missense_MutationNAE1469Q0.14
BLCAchr126582668SilentnovelF1439F0.26
BLCAchr126606305SilentnovelL23L0.41
BLCAchr126588300Missense_MutationnovelQ1155E0.26
BLCAchr126581763Missense_MutationnovelE1523Q0.36
BLCAchr1265706373'UTRnovel0.32
BLCAchr126600390Missense_MutationnovelE357K0.19
BLCAchr126573266Missense_MutationnovelL1789V0.43
BLCAchr126598416Missense_MutationnovelL498V0.15
BLCAchr126592007Missense_MutationnovelR1000P0.18
BLCAchr126595363Nonsense_MutationnovelE698*0.39
BRCAchr126581802Missense_MutationNAE1510Q0.14
BRCAchr126600550SilentnovelT349T0.29
BRCAchr126602094Missense_Mutationrs138116135R102C0.27
BRCAchr126593114Missense_MutationNAR877W0.3ResIII
BRCAchr126593169SilentNAD858D0.27
BRCAchr126587931Missense_MutationNAR1162W0.17
BRCAchr126601385Missense_MutationNAA235P0.69
BRCAchr126602129Missense_MutationNAP90Q0.35
BRCAchr126593113Missense_MutationNAR877Q0.44ResIII
BRCAchr126570986SilentNAV1868V0.28
BRCAchr126591732Missense_MutationnovelL1062V0.05
BRCAchr126599773Splice_RegionnovelT494T0.21
BRCAchr126593472Missense_MutationNAE820K0.18ResIII
BRCAchr126592041Missense_MutationNAI989F0.37
BRCAchr126606273Splice_SiteNAX34_splice0.38
BRCAchr126578894Nonsense_MutationNAE1645*0.12
BRCAchr126581141SilentNAD1604D0.13
BRCAchr126602132Missense_MutationnovelG89V0.09
BRCAchr126601053Missense_MutationNAG267V0.36
BRCAchr126570886Missense_MutationnovelE1902K0.08
BRCAchr126600303Missense_MutationNAD386N0.18
BRCAchr126592417Missense_MutationNAR975H0.08
BRCAchr126600965Missense_MutationnovelI296M0.15
BRCAchr126583251Missense_MutationNAG1336E0.08
BRCAchr126588373SilentnovelG1130G0.31
BRCAchr1265705943'UTRnovel0.27
BRCAchr126583291Missense_MutationNAE1323Q0.25
BRCAchr126598072Nonsense_MutationNAR572*0.16
BRCAchr126593114Missense_MutationNAR877W0.18ResIII
BRCAchr126570991Missense_MutationNAD1867N0.19
BRCAchr126591958Missense_MutationNAK1016N0.38
BRCAchr126587546SilentNAK1239K0.27
BRCAchr126583317Nonsense_MutationNAW1314*0.12
CESCchr1265700863'UTRnovel0.2
CESCchr126581125Missense_MutationNAE1610K0.4
CESCchr126602380Frame_Shift_DelNAK73Rfs*1290.32
CESCchr126583114Splice_SiteNAX1354_splice0.61
CESCchr126601696Missense_MutationnovelE170G0.64
CESCchr126602477Missense_MutationnovelE41K0.3
CESCchr126597989Missense_MutationNAK599N0.27
CESCchr126596082Missense_MutationNAD650N0.53
CESCchr126601662SilentNAF181F0.13
CESCchr126582862Missense_MutationnovelG1408S0.65
CESCchr126592745Silentrs748238713L909L0.31
CESCchr126594623Missense_MutationnovelE717K0.4ResIII
CESCchr126601038Missense_MutationnovelR272M0.09
CESCchr126594516Missense_MutationNAE752D0.31ResIII
CESCchr126578633Intronnovel0.14
CESCchr126577887SilentNAQ1753Q0.22
CESCchr126602453Missense_Mutationrs779921079P49A0.18
CESCchr1265700933'UTRnovel0.37
CESCchr126599862Missense_MutationNAD465N0.25
CESCchr126581068Missense_Mutationrs760270237E1629K0.53
COADchr126578115SilentNAN1714N0.24
COADchr126597932Missense_MutationnovelK618N0.15
COADchr126582612Splice_Regionrs7730897480.13
COADchr126600309Missense_MutationNAL384M0.41
COADchr126582872Frame_Shift_InsNAL1404Ffs*90.42
COADchr126587885Missense_MutationNAR1177H0.36
COADchr126596059SilentNAE657E0.32
COADchr126587834Missense_MutationNAL1194R0.22
COADchr126588315Missense_MutationNAP1150S0.18
COADchr126592505Frame_Shift_InsNAL946Tfs*30.2
COADchr126592417Missense_MutationNAR975H0.23
COADchr126583245Missense_MutationNAR1338I0.21
COADchr126578406Splice_RegionNA0.33
COADchr126581787Missense_Mutationrs200017158R1515C0.37
COADchr126587875SilentNAV1180V0.43
COADchr126591526Missense_MutationNAE1094K0.17
COADchr126581592Intronnovel0.34
COADchr1265705133'UTRnovel0.35
COADchr126583239Missense_MutationNAR1340H0.31
COADchr126582870Missense_MutationNAA1405V0.38
COADchr126581522Intronnovel0.12
COADchr126600216Splice_SiteNAX414_splice0.19
COADchr126581787Missense_Mutationrs200017158R1515C0.08
COADchr126594536Missense_MutationNAD746N0.41ResIII
COADchr126591472Missense_MutationNAF1112L0.28
COADchr126591493Missense_MutationNAR1105W0.4
COADchr126583007Intronnovel0.13
COADchr126594458Splice_SiteNAX771_splice0.05
COADchr126601389Silentrs533239676A233A0.24
COADchr126570945Missense_MutationNAA1882V0.53
COADchr126581364Frame_Shift_DelNAN1569Ifs*90.44
COADchr126592503Silentrs772555151L946L0.28
COADchr126592417Missense_MutationNAR975H0.37
COADchr126587889Missense_MutationnovelT1176A0.07
COADchr126591713Missense_MutationNAR1068H0.09
COADchr126578710Intronnovel0.32
COADchr126583121Splice_RegionNA0.37
COADchr126591466Missense_MutationNAA1114T0.32
COADchr126593587SilentNAS781S0.28
COADchr126600558Nonsense_MutationNAR347*0.25
COADchr126582868Missense_MutationNAR1406G0.22
COADchr126583007Intronnovel0.19
COADchr126600621Missense_MutationNAI326V0.14
COADchr126588298Splice_RegionnovelQ1155Q0.05
COADchr126598071Missense_MutationNAR572Q0.08
COADchr126582259Missense_MutationNAR1465W0.33
COADchr126599826Missense_MutationNAN477D0.28
COADchr126573233Missense_MutationNAR1800C0.24
COADchr126583162Intronrs7617556840.31
COADchr126593556Missense_MutationNAR792W0.07ResIII
COADchr126598386Missense_MutationNAW508R0.32
COADchr126592417Missense_MutationNAR975H0.34
COADchr126587441Silentrs746335183N1274N0.37
COADchr126602380Frame_Shift_DelNAK73Rfs*1290.13
COADchr126581582Intronnovel0.27
COADchr126599843Missense_MutationNAY471C0.32
COADchr126582243Missense_MutationNAP1470L0.21
COADchr126570955Missense_MutationNAP1879A0.39
COADchr126598372SilentNAQ512Q0.25
DLBCchr126593580Missense_MutationnovelL784V0.32ResIII
DLBCchr126601688Nonsense_MutationNAR173*0.34
ESCAchr126600557Missense_MutationNAR347Q0.4
ESCAchr126573229Missense_Mutationrs763955970R1801Q0.39
ESCAchr126598222Splice_RegionnovelQ562Q0.14
ESCAchr126591732Missense_MutationnovelL1062I0.08
ESCAchr1265702473'UTRnovel0.27
ESCAchr1265701783'UTRnovel0.19
GBMchr126577902SilentnovelR1748R0.26
GBMchr126597969Missense_MutationnovelA606E0.04
GBMchr126588350Missense_MutationnovelA1138V0.06
GBMchr126596107Missense_MutationNAL641F0.22
GBMchr126599774Missense_Mutationrs375234607T494M0.09
GBMchr126591523Missense_MutationnovelR1095C0.06
GBMchr126600576Missense_MutationnovelR341S0.14
GBMchr126592487Missense_MutationnovelP952T0.13
GBMchr126591755Missense_MutationnovelL1054P0.11
GBMchr126587755Missense_MutationnovelK1220N0.06
HNSCchr126582176SilentnovelV1492V0.12
HNSCchr126591976In_Frame_DelnovelN1010del0.05
HNSCchr126600292SilentnovelP389P0.13
HNSCchr126600293Missense_MutationnovelP389L0.14
HNSCchr126570867Splice_SitenovelX1907_splice0.21
HNSCchr126581732Missense_MutationnovelP1533L0.29
HNSCchr126600374Missense_MutationnovelV362E0.11
HNSCchr126581495Intronnovel0.08
HNSCchr126597994Nonsense_MutationNAR598*0.29
HNSCchr126582932SilentnovelP1384P0.07
HNSCchr126597932Frame_Shift_DelnovelK618Nfs*50.16
HNSCchr126582280Missense_MutationnovelA1458T0.25
HNSCchr126577909Missense_MutationnovelY1746C0.22
HNSCchr126583072Missense_MutationnovelV1368M0.1
HNSCchr126583239Missense_MutationNAR1340H0.27
KICHchr126592474Missense_MutationnovelR956L0.44
KICHchr126593564Missense_MutationNAN789S0.29ResIII
KIRCchr126601676Missense_MutationNAN177D0.36
KIRCchr126578875Missense_MutationNAD1651A0.17
KIRCchr126601693Missense_MutationNAD171A0.05
KIRCchr126587916Missense_MutationnovelK1167E0.31
KIRCchr126581661Missense_MutationNAV1557I0.38
KIRCchr126592468Missense_MutationNAL958H0.31
KIRCchr126581367Missense_MutationNAE1568A0.28
KIRPchr126598374Nonsense_MutationNAQ512*0.15
KIRPchr126602395Missense_MutationNAS68T0.3
LAMLchr126592418Missense_MutationNAR975C0.04
LAMLchr126582649Missense_MutationnovelR1446G0.15
LAMLchr126592417Missense_MutationNAR975H0.26
LAMLchr126573123SilentnovelS1836S0.03
LAMLchr126594520Missense_MutationnovelD751V0.08ResIII
LGGchr126592709Missense_MutationNAP921S0.09
LGGchr126593564Missense_MutationNAN789S0.15ResIII
LGGchr126581131Missense_Mutationrs201992075V1608I0.41
LGGchr126593521Silentrs112803905V803V0.42
LGGchr126592468Missense_MutationnovelL958R0.05
LIHCchr126594600Frame_Shift_DelnovelD720Efs*110.41ResIII
LIHCchr126601697Nonsense_MutationnovelE170*0.35
LIHCchr126591986Missense_MutationNAS1007F0.49
LIHCchr126581726Missense_MutationNAS1535L0.21
LIHCchr126573128Silentrs778830438L1835L0.15
LIHCchr126592698Missense_MutationnovelF924L0.46
LIHCchr126583338Missense_MutationNAE1307G0.35
LIHCchr126601399Missense_MutationNAA230V0.51
LIHCchr126583394Intronnovel0.17
LUADchr126600216Splice_SiteNAX414_splice0.07
LUADchr126570950SilentnovelP1880P0.16
LUADchr126593482Missense_MutationNAI816M0.37ResIII
LUADchr126587933Missense_MutationNAH1161R0.3
LUADchr1266064445'UTRnovel0.21
LUADchr126598062Missense_MutationnovelQ575L0.06
LUADchr126597982Missense_MutationNAD602Y0.41
LUADchr126601367Missense_MutationnovelV241L0.11
LUADchr126601451Missense_MutationNAS213G0.12
LUADchr126598283Missense_MutationNAQ542P0.36
LUADchr126598082Missense_MutationnovelQ568H0.68
LUADchr126599850Missense_MutationnovelS469P0.61
LUADchr126587869SilentnovelE1182E0.21
LUADchr126598087Missense_MutationnovelC567R0.29
LUADchr126600363Missense_MutationNAE366Q0.09
LUADchr126602081Missense_MutationnovelE106G0.3
LUADchr126593595Silentrs530395831L779L0.22
LUADchr126587758SilentnovelL1219L0.22
LUADchr126593424Missense_MutationnovelR836C0.25ResIII
LUADchr126581148Missense_Mutationrs771561972S1602L0.31
LUADchr126581149Missense_MutationnovelS1602P0.31
LUADchr126583473Intronnovel0.18
LUADchr126601328Nonsense_MutationnovelE254*0.29
LUSCchr126587839Missense_MutationnovelM1192I0.16
LUSCchr126583509Intronnovel0.65
LUSCchr126594575Missense_MutationNAG733C0.15ResIII
LUSCchr1266063985'UTRnovel0.31
LUSCchr126570950Frame_Shift_InsnovelV1881Sfs*110.13
LUSCchr126594492Missense_MutationNAQ760H0.33ResIII
LUSCchr126578683Intronnovel0.43
LUSCchr126587756Missense_MutationNAK1220R0.43
LUSCchr126587488Missense_MutationNAD1259H0.05
LUSCchr126581715Missense_MutationNAK1539E0.25
LUSCchr126593569SilentnovelI787I0.06
LUSCchr126583407Intronrs7617975510.33
LUSCchr1265705943'UTRnovel0.25
LUSCchr126597965SilentNAE607E0.12
LUSCchr126602063Missense_Mutationrs747906347P112L0.45
LUSCchr126591487Missense_MutationNAE1107Q0.1
LUSCchr126602417Missense_MutationnovelR61W0.68
LUSCchr126594510SilentnovelG754G0.32
LUSCchr126600243Missense_Mutationrs377488166E406K0.06
OVchr126597939Missense_MutationNAG616E0.13
OVchr126582867Missense_MutationNAR1406L0.19
OVchr126582655Missense_MutationnovelL1444I0.44
OVchr126598045Missense_MutationnovelD581H0.27
OVchr126581687Missense_MutationnovelD1548G0.04
OVchr126592017Missense_Mutationrs779545095L997F0.31
OVchr126587559Missense_MutationnovelG1235E0.08
OVchr126591792Missense_MutationNAG1042C0.13
OVchr126583675Intronnovel0.14
OVchr126587497Missense_MutationnovelR1256W0.4
OVchr126591764Missense_MutationnovelK1051T0.36
OVchr126601007SilentNAD282D0.14
OVchr126592013Missense_Mutationrs758014481N998S0.07
PAADchr126583379Splice_SitenovelX1294_splice0.03
PAADchr126601289Missense_MutationnovelG267S0.03
PAADchr126578121Nonsense_MutationnovelW1712*0.21
PAADchr126581733Missense_MutationnovelP1533T0.15
PAADchr126591492Missense_MutationNAR1105Q0.18
PAADchr126592751Missense_MutationnovelN907H0.04
PAADchr126598055SilentnovelK577K0.2
PRADchr126593125Missense_MutationNAD873G0.13ResIII
PRADchr126592506Frame_Shift_DelnovelK945Nfs*280.26
PRADchr126581576Intronnovel0.27
PRADchr126601962Missense_MutationnovelK146E0.24
PRADchr126601021Missense_MutationnovelP278T0.39
PRADchr126594499Missense_MutationNAT758I0.3ResIII
READchr126581683SilentnovelT1549T0.26
READchr126592779SilentNAK897K0.25
READchr126598287Missense_MutationNAR541W0.24
READchr126581535Intronnovel0.21
READchr126587447SilentNAG1272G0.58
READchr126598071Missense_MutationNAR572Q0.17
READchr126583103SilentNAD1357D0.31
READchr126592031Missense_MutationNAR992Q0.39
READchr126602392Missense_MutationNAK69T0.32
SARCchr1265705703'UTRnovel0.24
SARCchr126583267Nonsense_MutationnovelR1331*0.55
SARCchr126583268Silentrs769359634A1330A0.54
SARCchr1266064285'UTRnovel0.63
SARCchr1266064295'UTRnovel0.59
SKCMchr126583121Splice_RegionNA0.38
SKCMchr126583083Missense_MutationNAS1364F0.19
SKCMchr126591714Missense_MutationNAR1068C0.28
SKCMchr126581740Missense_MutationnovelM1530I0.54
SKCMchr126598232Missense_MutationNAS559F0.23
SKCMchr1265705923'UTRnovel0.16
SKCMchr126593191Missense_MutationNAS851F0.11ResIII
SKCMchr126592462Missense_MutationNAA960V0.19
SKCMchr126582784IntronNA0.3
SKCMchr126593608SilentNAS774S0.32
SKCMchr126583121Splice_RegionNA0.09
SKCMchr126591784SilentNAA1044A0.25
SKCMchr126600576Missense_MutationnovelR341C0.29
SKCMchr126600577SilentnovelS340S0.29
SKCMchr126593099Nonsense_MutationNAQ882*0.53ResIII
SKCMchr126582965Intronrs7634071780.33
SKCMchr126587899SilentNAY1172Y0.51
SKCMchr126581708Missense_MutationNAP1541L0.55
SKCMchr126591714Missense_MutationNAR1068C0.18
SKCMchr126583065Missense_MutationNAS1370L0.46
SKCMchr126596046Nonsense_MutationNAQ662*0.11
SKCMchr126581737SilentNAS1531S0.05
SKCMchr126599833SilentnovelH474H0.22
SKCMchr126599835Missense_Mutationrs187920601H474Y0.43
SKCMchr126591726Missense_MutationnovelE1064K0.45
SKCMchr126592517Nonsense_MutationnovelQ942*0.23
SKCMchr126592518Silentrs747303727D941D0.22
SKCMchr126582943Splice_RegionNA0.39
SKCMchr126583060Missense_MutationnovelE1372K0.25
SKCMchr126594607Missense_MutationNAT722I0.27ResIII
SKCMchr126582173SilentNAL1493L0.66
SKCMchr126596104SilentNAI642I0.41
SKCMchr126582894Missense_MutationNAD1397V0.12
SKCMchr126602008Silentrs368112823S130S0.42
SKCMchr126602009Missense_Mutationrs754152386S130F0.39
SKCMchr126600558Nonsense_MutationNAR347*0.47
SKCMchr126598421Missense_MutationNAP496L0.07
SKCMchr126578488SilentnovelP1680P0.43
SKCMchr126578489Missense_MutationnovelP1680L0.43
SKCMchr126601711Missense_MutationNAH165L0.27
SKCMchr126596113SilentNAH639H0.2
SKCMchr126582272Silentrs370369438V1460V0.29
SKCMchr126570955Missense_MutationnovelP1879S0.53
SKCMchr126573184Missense_MutationNAM1816T0.25
SKCMchr126593215Missense_MutationNAV843A0.18ResIII
SKCMchr126591518SilentNAI1096I0.53
SKCMchr126587795Missense_MutationnovelT1207I0.26
SKCMchr126600941Frame_Shift_InsnovelR305Afs*20.44
STADchr126592549Frame_Shift_DelnovelL931Wfs*130.28
STADchr126591472Missense_MutationNAF1112L0.35
STADchr126599897Missense_MutationnovelR453Q0.26
STADchr126597955Missense_MutationNAR611C0.33
STADchr126581323Missense_MutationNAV1583F0.11
STADchr126596055Missense_MutationNAV659M0.04
STADchr126594563SilentNAL737L0.21
STADchr126602380Frame_Shift_DelNAK73Rfs*1290.21
STADchr126583173Intronrs7616150910.25
STADchr126587885Missense_MutationNAR1177H0.34
STADchr126587930Missense_MutationNAR1162Q0.12
STADchr126600217Splice_Regionrs761570351C414C0.2
STADchr126602380Frame_Shift_DelNAK73Rfs*1290.21
STADchr126602380Frame_Shift_DelNAK73Rfs*1290.19
STADchr126591492Missense_MutationNAR1105Q0.35
STADchr126583253Missense_MutationNAK1335N0.39
STADchr126598349Missense_MutationNAP520H0.34
STADchr126578062Missense_MutationNAR1732L0.24
STADchr126582868Missense_MutationNAR1406C0.26
STADchr126606311SilentNAD21D0.2
STADchr126577792Missense_MutationNAR1785M0.34
STADchr126599781Frame_Shift_DelnovelR492Vfs*70.23
STADchr126583245Missense_MutationNAR1338I0.34
STADchr126577904Missense_MutationnovelR1748W0.12
STADchr126606285Frame_Shift_DelnovelP30Hfs*1720.4
STADchr126583245Missense_MutationNAR1338I0.19
STADchr126583047Missense_MutationNAD1376G0.12
STADchr126587486SilentNAD1259D0.07
STADchr126602380Frame_Shift_DelNAK73Rfs*1290.25
STADchr126592460Missense_MutationNAD961N0.06
STADchr126578488Frame_Shift_DelnovelK1681Rfs*30.18
STADchr126573233Missense_MutationNAR1800C0.35
STADchr126582697Nonsense_MutationNAR1430*0.26
STADchr126593493Missense_MutationNAR813C0.16ResIII
STADchr126578063Missense_Mutationrs767578728R1732W0.36
STADchr126587816Missense_MutationNAR1200Q0.12
STADchr126570951Frame_Shift_DelnovelP1880Sfs*110.24
STADchr126583240Missense_MutationNAR1340C0.64
STADchr126577874Missense_MutationNAY1758H0.2
STADchr126583007Intronnovel0.31
STADchr126591927Missense_MutationNAV1027M0.29
STADchr126593114Missense_MutationNAR877W0.09ResIII
STADchr126581702Missense_MutationNAP1543L0.11
STADchr126592528Missense_MutationnovelA938V0.14
STADchr126592506Frame_Shift_DelnovelK945Nfs*280.38
STADchr126595341Missense_MutationNAT705I0.34
STADchr126578881Missense_MutationNAA1649V0.24
STADchr126594588Silentrs368003608P728P0.26
STADchr126597955Missense_MutationNAR611C0.06
STADchr126587476Missense_MutationNAD1263N0.04
STADchr126591790SilentNAG1042G0.08
STADchr126592506Frame_Shift_DelnovelK945Nfs*280.09
STADchr126583070SilentNAV1368V0.11
STADchr126593492Missense_MutationNAR813H0.1ResIII
STADchr126600584Missense_MutationnovelR338H0.32
STADchr126602380Frame_Shift_DelNAK73Rfs*1290.17
UCECchr126593445Missense_MutationnovelR829C0.32ResIII
UCECchr126593555Missense_MutationNAR792Q0.35ResIII
UCECchr126592815Missense_MutationNAF885L0.32ResIII
UCECchr126587931Missense_MutationNAR1162W0.25
UCECchr126593555Missense_MutationNAR792Q0.51ResIII
UCECchr126588342Missense_MutationNAV1141L0.47
UCECchr126591492Missense_MutationnovelR1105P0.45
UCECchr126591493Missense_MutationNAR1105W0.41
UCECchr126583245Missense_MutationNAR1338I0.31
UCECchr126597956SilentnovelE610E0.08
UCECchr126570960Missense_MutationNAR1877Q0.03
UCECchr126602416Missense_Mutationrs753831942R61Q0.25
UCECchr126591713Missense_MutationNAR1068H0.39
UCECchr126593113Missense_MutationNAR877Q0.24ResIII
UCECchr126592053Missense_MutationNAY985H0.4
UCECchr126591518SilentNAI1096I0.34
UCECchr126600634Silentrs371206767F321F0.26
UCECchr126588341Missense_MutationnovelV1141G0.56
UCECchr126598286Missense_MutationNAR541Q0.43
UCECchr1265702553'UTRnovel0.6
UCECchr126582830IntronNA0.43
UCECchr126583524IntronNA0.24
UCECchr126600557Missense_MutationNAR347Q0.44
UCECchr126592417Missense_MutationNAR975H0.55
UCECchr126583313Missense_MutationnovelE1315D0.49
UCECchr126600558Nonsense_MutationNAR347*0.56
UCECchr126596097Missense_MutationnovelR645W0.41
UCECchr126601402Missense_MutationnovelA229V0.31
UCECchr126587930Missense_MutationNAR1162Q0.22
UCECchr126592417Missense_MutationNAR975H0.42
UCECchr126593113Missense_MutationNAR877Q0.42ResIII
UCECchr126592016Missense_MutationNAL997R0.7
UCECchr126583007Intronnovel0.41
UCECchr126583245Missense_MutationNAR1338I0.4
UCECchr126591526Missense_MutationNAE1094K0.37
UCECchr126600276Missense_MutationnovelV395I0.36
UCECchr126583201Nonsense_MutationnovelR1353*0.26
UCECchr126592542Missense_MutationnovelE933D0.13
UCECchr126582931Missense_Mutationrs771875799R1385C0.44
UCECchr126591516Missense_MutationnovelD1097G0.48
UCECchr126592749Missense_MutationnovelN907K0.39
UCECchr126588383Missense_MutationNAR1127Q0.36
UCECchr126577786Missense_MutationNAK1787R0.44
UCECchr126581087Missense_MutationNAE1622D0.18
UCECchr126587743Missense_MutationNAE1224D0.24
UCECchr126601305Missense_MutationNAK261N0.14
UCECchr126602447Missense_MutationNAL51I0.12
UCECchr126587401Missense_MutationnovelR1288W0.43
UCECchr126591492Missense_MutationNAR1105Q0.47
UCECchr126591714Missense_MutationNAR1068C0.36
UCECchr126597946Missense_Mutationrs369228909R614C0.43
UCECchr126593492Missense_MutationNAR813H0.2ResIII
UCECchr126592417Missense_MutationNAR975H0.41
UCECchr126591493Missense_MutationNAR1105W0.27
UCECchr126587936Missense_MutationnovelA1160G0.44
UCECchr126591492Missense_MutationNAR1105Q0.16
UCECchr1265701583'UTRnovel0.47
UCECchr126593556Missense_MutationNAR792W0.38ResIII
UCECchr126602498Splice_SiteNAX34_splice0.23
UCECchr126573209Missense_MutationNAS1808P0.11
UCECchr126598072Nonsense_MutationNAR572*0.21
UCECchr126600940Missense_MutationNAR305C0.35
UCECchr126602073Missense_MutationNAD109N0.5
UCECchr1265703473'UTRnovel0.57
UCECchr126578045SilentnovelL1738L0.4
UCECchr126591493Missense_MutationNAR1105W0.42
UCECchr126583245Missense_MutationNAR1338I0.35
UCECchr126600938SilentNAR305R0.25
UCECchr126591475Missense_MutationNAR1111C0.11
UCECchr126578409Nonsense_MutationnovelE1707*0.22
UCECchr126582680SilentnovelP1435P0.22
UCECchr126601464Frame_Shift_DelnovelK208Nfs*270.37
UCECchr126588383Missense_MutationNAR1127Q0.44
UCECchr126593191Missense_MutationNAS851F0.44ResIII
UCECchr126600290Missense_Mutationrs756628084R390H0.27
UCECchr126602389Missense_Mutationrs377735756R70H0.37
UCECchr1265704273'UTRnovel0.33
UCECchr126587931Missense_MutationNAR1162W0.31
UCECchr126591513Missense_MutationnovelG1098A0.22
UCECchr126598071Missense_MutationNAR572Q0.24
UCECchr126588374Missense_MutationNAG1130D0.6
UCECchr126577791Missense_MutationnovelR1785S0.27
UCECchr126587874Missense_MutationnovelE1181K0.32
UCECchr126591493Missense_MutationNAR1105W0.2
UCECchr126581064Missense_MutationnovelP1630H0.4
UCECchr126587882Missense_MutationNAA1178V0.42
UCECchr1265705373'UTRnovel0.2
UCECchr126583082SilentnovelS1364S0.34
UCECchr126588368Missense_MutationnovelG1132V0.52
UCECchr126597909Missense_MutationNAR626Q0.52
UCECchr126601503Missense_MutationnovelK195N0.1
UCECchr126583245Missense_MutationNAR1338I0.46
UCECchr126588311Missense_MutationNAH1151P0.41
UCECchr126583245Missense_MutationNAR1338I0.32
UCECchr126600340Silentrs779177743C373C0.45
UCECchr126591492Missense_MutationnovelR1105L0.23
UCECchr126587485Missense_MutationNAR1260C0.81
UCECchr126597910Nonsense_MutationnovelR626*0.33
UCECchr126591493Missense_MutationNAR1105W0.25
UCECchr1265703463'UTRnovel0.54
UCECchr126592417Missense_MutationNAR975H0.49
UCECchr126587931Missense_MutationNAR1162W0.3
UCECchr126587520Missense_MutationNAH1248P0.4
UCECchr1265703623'UTRnovel0.32
UCECchr126582918Missense_MutationNAR1389H0.33
UCECchr126587874Missense_MutationnovelE1181K0.35
UCECchr126597909Missense_MutationNAR626Q0.21
UCECchr126593587SilentNAS781S0.27
UCECchr126594488Missense_MutationnovelA762T0.3ResIII
UCECchr126598350Missense_MutationnovelP520S0.43
UCECchr126591493Missense_MutationNAR1105W0.36
UCECchr126592031Missense_MutationNAR992Q0.44
UCECchr126588353Missense_MutationnovelT1137I0.19
UCECchr126602380Frame_Shift_DelNAK73Rfs*1290.29
UCECchr126592417Missense_MutationNAR975H0.22
UCECchr1265703023'UTRnovel0.32
UCECchr126597990Missense_MutationnovelK599T0.28
UCECchr126592434Missense_MutationNAK969N0.59
UCECchr126591513Missense_MutationNAG1098D0.5
UCECchr126600608Missense_MutationnovelS330Y0.35
UCECchr126583302Missense_MutationnovelR1319Q0.48
UCECchr126592417Missense_MutationNAR975H0.32
UCECchr126587931Missense_MutationNAR1162W0.32
UCECchr126592423Missense_MutationnovelI973S0.38
UCECchr126583302Missense_MutationnovelR1319Q0.38
UCECchr126599952Nonsense_MutationnovelE435*0.36
UCECchr126600316Missense_MutationnovelE381D0.44
UCECchr126592505Frame_Shift_InsNAL946Tfs*30.41
UCECchr126595402Missense_Mutationrs773573339P685S0.07
UCECchr126591493Missense_MutationNAR1105W0.47
UCECchr126583007Intronnovel0.07
UCECchr126588356Missense_MutationNAA1136D0.41
UCECchr126578066Nonsense_MutationnovelR1731*0.08
UCECchr126577864Missense_MutationnovelL1761H0.2
UCECchr126591714Missense_MutationNAR1068C0.3
UCECchr126600385Missense_MutationnovelE358D0.36
UCECchr126592472Missense_MutationNAR957W0.29
UCECchr126599831Missense_MutationnovelC475Y0.26
UCECchr126602380Frame_Shift_DelNAK73Rfs*1290.3
UCECchr126583014Intronnovel0.2
UCECchr126582726Missense_MutationnovelQ1420R0.39
UCECchr126602380Frame_Shift_DelNAK73Rfs*1290.46
UCECchr126573190Missense_MutationNAP1814H0.25
UCECchr126583201Nonsense_MutationnovelR1353*0.05
UCECchr126598371Missense_MutationnovelP513S0.32
UCECchr126601417Missense_MutationnovelA224V0.18
UCECchr126601508Missense_MutationNAP194S0.46
UCECchr126587940Missense_MutationNAR1159G0.44
UCECchr126582648Missense_Mutationrs770630218R1446K0.25
UCECchr126587931Missense_MutationNAR1162W0.31
UCECchr126601975Missense_MutationNAD141E0.4
UCECchr126593125Missense_MutationNAD873G0.31ResIII
UCECchr126601023Missense_MutationNAS277N0.4
UCECchr126587771Missense_MutationNAL1215R0.3
UCECchr126583240Missense_MutationNAR1340C0.37
UCECchr126583267Nonsense_MutationnovelR1331*0.36
UCECchr126570883Missense_MutationnovelP1903S0.21
UCECchr126578087Missense_MutationnovelK1724Q0.27
UCECchr126582696Missense_MutationnovelR1430Q0.35
UCECchr126583201Nonsense_MutationnovelR1353*0.23
UCECchr126587885Missense_MutationNAR1177H0.19
UCECchr126591522Missense_MutationnovelR1095H0.54
UCECchr126592438Missense_MutationnovelS968Y0.22
UCECchr126593521Silentrs112803905V803V0.39
UCECchr126595394Missense_MutationnovelK687N0.17
UCECchr126597945Missense_MutationnovelR614H0.32
UCECchr126601468Missense_MutationnovelA207V0.17
UCECchr126593186Nonsense_MutationnovelE853*0.53ResIII
UCECchr126593476Missense_MutationnovelE818D0.33ResIII
UCECchr126577874Missense_MutationNAY1758H0.67
UCECchr126587940Missense_MutationNAR1159G0.46
UCECchr126593438Missense_MutationnovelG831D0.29ResIII
UCECchr126600340Silentrs779177743C373C0.33
UCECchr126606320Missense_MutationnovelE18D0.35
UCECchr126588378Missense_MutationnovelG1129R0.41
UCECchr126587460Missense_MutationNAT1268I0.26
UCECchr126600545Frame_Shift_DelnovelK351Rfs*90.29
UCECchr126602380Frame_Shift_DelNAK73Rfs*1290.36
UCECchr126591743Frame_Shift_InsnovelM1058Nfs*60.22
UCECchr126593493Missense_MutationNAR813C0.35ResIII
UCECchr126588299Missense_MutationnovelQ1155R0.57
UCECchr126598346Missense_MutationnovelR521Q0.18
UCECchr126601017Missense_MutationnovelR279H0.45
UCECchr126570993Missense_MutationnovelA1866D0.44
UCECchr126583197Splice_SitenovelX1354_splice0.38
UCECchr126591714Missense_MutationNAR1068C0.4
UCSchr126587403Missense_MutationnovelV1287G0.34
UCSchr126577808Missense_MutationnovelK1780E0.98
UCSchr126594550Nonsense_MutationnovelW741*0.43ResIII
UCSchr126583240Missense_MutationNAR1340C0.38
UCSchr126591493Missense_MutationNAR1105W0.46
UCSchr126591472Missense_MutationNAF1112L0.48
UCSchr126591767Missense_MutationnovelG1050E0.96
UCSchr126591471Missense_MutationnovelF1112S0.73
UCSchr126592029Missense_MutationnovelN993H0.36
UCSchr126599972Nonsense_MutationnovelS428*0.4
UCSchr126588392Missense_MutationnovelL1124P0.22
UCSchr126601531Splice_SitenovelX186_splice0.52

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.10420.11856
MESODEL0.08050.17495
PAADDEL0.1250.0019175
TGCTAMP0.94673.5918e-21
THYMAMP0.03250.24554

Survival Analysis
CancerP-value Q-value
THYM0.0028

Kaplan-Meier Survival Analysis

SARC0.01

Kaplan-Meier Survival Analysis

ACC0.038

Kaplan-Meier Survival Analysis

UCS0.045

Kaplan-Meier Survival Analysis

HNSC0.029

Kaplan-Meier Survival Analysis

SKCM0.02

Kaplan-Meier Survival Analysis

KIRP0.05

Kaplan-Meier Survival Analysis

CESC0.018

Kaplan-Meier Survival Analysis

LAML0.036

Kaplan-Meier Survival Analysis

KICH0.01

Kaplan-Meier Survival Analysis

UCEC0.0013

Kaplan-Meier Survival Analysis

LIHC0.00097

Kaplan-Meier Survival Analysis

UVM0.019

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000111642 (Gene tree)
Gene ID
1108
Gene Symbol
CHD4
Alias
Mi-2b|Mi2-BETA
Full Name
chromodomain helicase DNA binding protein 4
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
44,443 bases
Position
chr12:6,570,082-6,614,524
Accession
1919
RBP type
canonical RBP
Summary
The product of this gene belongs to the SNF2/RAD54 helicase family. It represents the main component of the nucleosome remodeling and deacetylase complex and plays an important role in epigenetic transcriptional repression. Patients with dermatomyositis develop antibodies against this protein. Somatic mutations in this gene are associated with serous endometrial tumors. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2014]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000494126ResIIIPF04851.158.7e-1011
ENSP00000494981ResIIIPF04851.151.1e-0911
ENSP00000494247ResIIIPF04851.151.2e-0911
ENSP00000493829ResIIIPF04851.151.4e-0911
ENSP00000349508ResIIIPF04851.151.4e-0911
ENSP00000496543ResIIIPF04851.151.5e-0911
ENSP00000494574ResIIIPF04851.151.5e-0911
ENSP00000493471ResIIIPF04851.151.5e-0911
ENSP00000494456ResIIIPF04851.151.6e-0911
ENSP00000493619ResIIIPF04851.151.6e-0911
ENSP00000496358ResIIIPF04851.151.6e-0911
ENSP00000440542ResIIIPF04851.151.6e-0911
ENSP00000496163ResIIIPF04851.151.6e-0911
ENSP00000440392ResIIIPF04851.151.6e-0911
ENSP00000496634ResIIIPF04851.151.6e-0911
ENSP00000496707ResIIIPF04851.152.3e-0911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000647394CHD4-2511995--- (aa)--
ENST00000642860CHD4-2151799--- (aa)--
ENST00000646462CHD4-2442301-ENSP00000496291605 (aa)-A0A2R8Y7I0
ENST00000645991CHD4-2381253-ENSP0000049645773 (aa)-A0A2R8Y7X1
ENST00000644077CHD4-2221972-ENSP00000496233560 (aa)-A0A2R8Y7M9
ENST00000647112CHD4-2491564--- (aa)--
ENST00000642594CHD4-2116142-ENSP000004936191889 (aa)-A0A2R8Y425
ENST00000646145CHD4-240620--- (aa)--
ENST00000647333CHD4-250753--- (aa)--
ENST00000646268CHD4-2416236-ENSP000004950231377 (aa)-A0A2R8Y685
ENST00000644289CHD4-2255007-ENSP000004967071669 (aa)-A0A2R8Y8C1
ENST00000642637CHD4-2122501-ENSP00000495233458 (aa)-A0A2R8YE38
ENST00000544484CHD4-2076555-ENSP000004403921937 (aa)-A0A0C4DGG9
ENST00000643538CHD4-2202533-ENSP00000494571554 (aa)-A0A2R8Y5M9
ENST00000645645CHD4-2366297XM_017018730ENSP000004965431899 (aa)XP_016874219A0A2R8YFK9
ENST00000646787CHD4-247171--- (aa)--
ENST00000430771CHD4-202527--- (aa)--
ENST00000645265CHD4-235200--- (aa)--
ENST00000646806CHD4-2486359XM_017018732ENSP000004945741892 (aa)XP_016874221A0A2R8Y5J0
ENST00000540960CHD4-205913--- (aa)--
ENST00000545083CHD4-208511--- (aa)--
ENST00000537634CHD4-204792--- (aa)--
ENST00000642879CHD4-2166309XM_024448804ENSP000004944561920 (aa)XP_024304572A0A2R8Y521
ENST00000642810CHD4-2146630-ENSP000004951601425 (aa)-A0A2R8Y5Z7
ENST00000642686CHD4-2131204--- (aa)--
ENST00000643367CHD4-219764--- (aa)--
ENST00000646609CHD4-246854--- (aa)--
ENST00000646608CHD4-2454988-ENSP000004938291554 (aa)-A0A2R8YDJ9
ENST00000644352CHD4-2264111-ENSP000004949811215 (aa)-A0A2R8YDW2
ENST00000645199CHD4-2341327--- (aa)--
ENST00000643815CHD4-2214945-ENSP000004942471484 (aa)-A0A2R8YD40
ENST00000644356CHD4-2273075--- (aa)--
ENST00000647535CHD4-2543099--- (aa)--
ENST00000646070CHD4-239582--- (aa)--
ENST00000645095CHD4-2326291XM_006718958ENSP000004966341940 (aa)XP_006719021Q14839
ENST00000545942CHD4-2101267-ENSP00000437506354 (aa)-F5H6N4
ENST00000644652CHD4-2281616-ENSP00000495539103 (aa)-A0A2R8Y6G9
ENST00000642893CHD4-217361-ENSP0000049444116 (aa)-A0A2R8Y512
ENST00000645717CHD4-237311--- (aa)--
ENST00000357008CHD4-2016438XM_006718962ENSP000003495081902 (aa)XP_006719025A0A2U3TZM0
ENST00000645005CHD4-2306175XM_006718959ENSP000004934711914 (aa)XP_006719022A0A2R8Y212
ENST00000644801CHD4-2295326-ENSP000004966601147 (aa)-A0A2R8Y8B3
ENST00000544040CHD4-2066582XM_017018726ENSP000004405421912 (aa)XP_016874215Q14839
ENST00000647483CHD4-2534145-ENSP000004941261262 (aa)-A0A2R8Y4X2
ENST00000643335CHD4-2186411-ENSP000004963581903 (aa)-A0A2R8YFD8
ENST00000645143CHD4-233612-ENSP0000049583448 (aa)-A0A2R8Y795
ENST00000646360CHD4-2422867--- (aa)--
ENST00000535717CHD4-2031405--- (aa)--
ENST00000646366CHD4-2434622--- (aa)--
ENST00000545584CHD4-209555-ENSP00000444614125 (aa)-F5H596
ENST00000645022CHD4-2316673XM_005253668ENSP000004961631905 (aa)XP_005253725F5GWX5
ENST00000644137CHD4-2246499-ENSP000004958161645 (aa)-A0A2R8YER1
ENST00000647426CHD4-252168--- (aa)--
ENST00000644132CHD4-223773-ENSP0000049449851 (aa)-A0A2R8Y539
Gene Model
Click here to download ENSG00000111642's gene model file
Pathways
Pathway IDPathway NameSource
hsa05165Human papillomavirus infectionKEGG
hsa05203Viral carcinogenesisKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000111642Myopia, Degenerative6E-623049088
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000111642rs1057510126574121?Myopia (pathological)23049088[NR]EFO_0004207
ENSG00000111642rs10849492126611629AHeel bone mineral density30598549[0.0096-0.019] unit decrease0.0142951EFO_0009270
ENSG00000111642rs7308584126597578?Red cell distribution width30595370EFO_0005192
ENSG00000111642rs1639122126601981?Red blood cell count30595370EFO_0004305
ENSG00000111642rs1639122126601981?Heel bone mineral density30595370EFO_0009270
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000111642's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000111642CHD46737.062ENSG00000173575CHD28768.367
ENSG00000111642CHD45236.256ENSG00000127616SMARCA49139.437
ENSG00000111642CHD49975.184ENSG00000170004CHD39964.038
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000111642CHD49982.594ENSAPOG00000008935chd4a9978.930Acanthochromis_polyacanthus
ENSG00000111642CHD49974.315ENSAPOG00000020502-9371.104Acanthochromis_polyacanthus
ENSG00000111642CHD410098.849ENSAMEG00000014179-10098.864Ailuropoda_melanoleuca
ENSG00000111642CHD49979.487ENSACIG00000012387-9576.092Amphilophus_citrinellus
ENSG00000111642CHD49981.547ENSACIG00000019310chd4a9092.825Amphilophus_citrinellus
ENSG00000111642CHD410080.095ENSAOCG00000016412-9881.098Amphiprion_ocellaris
ENSG00000111642CHD49980.725ENSAOCG00000000507-9876.157Amphiprion_ocellaris
ENSG00000111642CHD49479.643ENSAPEG00000001757chd4a9977.347Amphiprion_percula
ENSG00000111642CHD49980.469ENSAPEG00000005957-9875.501Amphiprion_percula
ENSG00000111642CHD49974.485ENSAPEG00000020306-8983.019Amphiprion_percula
ENSG00000111642CHD499