EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr6	41921770	Missense_Mutation	rs760983487	E70K	0.18
BRCA	chr6	41931486	Nonsense_Mutation	NA	Y265*	0.39	Bystin
BRCA	chr6	41927493	Nonsense_Mutation	NA	E130*	0.45
CESC	chr6	41921623	Missense_Mutation	NA	D21N	0.6
CESC	chr6	41931552	Silent	novel	F287F	0.3
CESC	chr6	41930657	Missense_Mutation	rs539386229	G198A	0.27	Bystin
COAD	chr6	41932526	Nonsense_Mutation	NA	W378*	0.25	Bystin
COAD	chr6	41930138	Silent	NA	T146T	0.27
COAD	chr6	41930750	Missense_Mutation	NA	A229V	0.29	Bystin
COAD	chr6	41927456	Silent	rs551967443	A117A	0.2
COAD	chr6	41931479	Missense_Mutation	novel	A263V	0.06	Bystin
COAD	chr6	41921592	Frame_Shift_Del	rs768665277	*G12Vfs43**	0.42
COAD	chr6	41921322	5'UTR	novel		0.58
GBM	chr6	41932797	3'UTR	novel		0.5
GBM	chr6	41930681	Frame_Shift_Del	novel	*I206Tfs36**	0.09	Bystin
GBM	chr6	41930670	Missense_Mutation	novel	K202N	0.08	Bystin
HNSC	chr6	41930177	Silent	novel	Q159Q	0.1
HNSC	chr6	41932619	Silent	novel	P409P	0.17
HNSC	chr6	41921763	Missense_Mutation	novel	E67D	0.33
HNSC	chr6	41930202	Missense_Mutation	novel	E168K	0.12	Bystin
HNSC	chr6	41931495	Silent	novel	L268L	0.27
LIHC	chr6	41921576	Missense_Mutation	NA	K5M	0.3
LIHC	chr6	41932671	Missense_Mutation	rs201808575	R427C	0.28	Bystin
LUAD	chr6	41927487	Missense_Mutation	rs771038247	E128K	0.07
LUAD	chr6	41930202	Nonsense_Mutation	NA	E168*	0.11	Bystin
LUSC	chr6	41921556	5'UTR	novel		0.28
LUSC	chr6	41932609	Missense_Mutation	rs149871094	R406Q	0.07	Bystin
LUSC	chr6	41921712	Silent	novel	V50V	0.29
LUSC	chr6	41931769	Missense_Mutation	rs764063989	R303W	0.16	Bystin
LUSC	chr6	41930187	Missense_Mutation	NA	E163Q	0.23	Bystin
LUSC	chr6	41921683	Missense_Mutation	novel	G41R	0.39
LUSC	chr6	41932683	Missense_Mutation	novel	D431N	0.07
OV	chr6	41932618	Missense_Mutation	novel	P409L	0.07	Bystin
OV	chr6	41930162	Nonsense_Mutation	novel	L155*	0.15	Bystin
OV	chr6	41930217	Missense_Mutation	novel	P173T	0.3	Bystin
PAAD	chr6	41927459	Silent	novel	G118G	0.16
PAAD	chr6	41921785	Missense_Mutation	novel	T75A	0.05
PRAD	chr6	41932692	Missense_Mutation	novel	I434F	0.33
PRAD	chr6	41921601	Silent	novel	Q13Q	0.23
PRAD	chr6	41932565	Silent	NA	A391A	0.3
READ	chr6	41930134	Missense_Mutation	rs765781821	R145H	0.3	Bystin
READ	chr6	41931434	Missense_Mutation	rs753749685	R248H	0.5	Bystin
SKCM	chr6	41932608	Missense_Mutation	rs374880622	R406W	0.34	Bystin
SKCM	chr6	41921631	Silent	rs745659269	I23I	0.59
SKCM	chr6	41931748	Nonsense_Mutation	NA	E296*	0.43	Bystin
SKCM	chr6	41921631	Silent	rs745659269	I23I	0.15
SKCM	chr6	41927533	Missense_Mutation	NA	A143V	0.18	Bystin
SKCM	chr6	41930235	Missense_Mutation	NA	P179S	0.37	Bystin
STAD	chr6	41930210	Silent	NA	S170S	0.11
STAD	chr6	41932565	Silent	NA	A391A	0.16
STAD	chr6	41921592	Frame_Shift_Del	rs768665277	*G12Vfs43**	0.15
STAD	chr6	41930684	Missense_Mutation	NA	I207T	0.16	Bystin
STAD	chr6	41921591	Frame_Shift_Ins	novel	*Q13Sfs88**	0.2
UCEC	chr6	41930728	Missense_Mutation	rs368831348	P222S	0.21	Bystin
UCEC	chr6	41932394	Silent	novel	Y334Y	0.34
UCEC	chr6	41932605	Missense_Mutation	novel	L405F	0.33	Bystin
UCEC	chr6	41932605	Missense_Mutation	novel	L405F	0.21	Bystin
UCEC	chr6	41931434	Missense_Mutation	rs753749685	R248H	0.42	Bystin
UCEC	chr6	41932425	Missense_Mutation	NA	L345M	0.17	Bystin
UCEC	chr6	41931748	Missense_Mutation	rs747035538	E296K	0.11	Bystin
UCEC	chr6	41932428	Silent	novel	L346L	0.2
UCEC	chr6	41931421	Missense_Mutation	rs762121058	R244C	0.37	Bystin
UCEC	chr6	41932594	Missense_Mutation	novel	L401R	0.19	Bystin
UCEC	chr6	41930239	Missense_Mutation	rs146819393	R180Q	0.19	Bystin
UCEC	chr6	41931815	Missense_Mutation	novel	P318H	0.09	Bystin
UCEC	chr6	41931405	Silent	novel	A238A	0.24
UCEC	chr6	41932428	Silent	novel	L346L	0.15
UCEC	chr6	41932363	Missense_Mutation	rs764644125	A324V	0.35	Bystin
UCEC	chr6	41932579	Missense_Mutation	NA	D396G	0.33	Bystin
UCEC	chr6	41930734	Missense_Mutation	NA	A224T	0.25	Bystin
UCEC	chr6	41930750	Missense_Mutation	NA	A229V	0.35	Bystin
UCEC	chr6	41931747	Silent	rs140745860	C295C	0.37

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
COAD	AMP	0.1729	0.005341
LUAD	AMP	0.2713	0.00086111
READ	AMP	0.2727	0.02906
SARC	AMP	0.1712	0.031491

Survival Analysis

Cancer	P-value	Q-value
THYM	0.0023	Kaplan-Meier Survival Analysis
KIRC	0.00037	Kaplan-Meier Survival Analysis
SARC	0.00033	Kaplan-Meier Survival Analysis
MESO	0.04	Kaplan-Meier Survival Analysis
ACC	0.0037	Kaplan-Meier Survival Analysis
HNSC	0.018	Kaplan-Meier Survival Analysis
SKCM	0.0001	Kaplan-Meier Survival Analysis
BRCA	0.013	Kaplan-Meier Survival Analysis
KIRP	0.00084	Kaplan-Meier Survival Analysis
LAML	0.0072	Kaplan-Meier Survival Analysis
UCEC	0.0022	Kaplan-Meier Survival Analysis
LIHC	0.0019	Kaplan-Meier Survival Analysis
DLBC	0.043	Kaplan-Meier Survival Analysis
LGG	0.036	Kaplan-Meier Survival Analysis
THCA	0.013	Kaplan-Meier Survival Analysis
LUAD	0.011	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000112578 (Gene tree)
Gene ID: 705
Gene Symbol: BYSL
Alias: Enp1
Full Name: bystin like
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 25,200 bases
Position: chr6:41,907,847-41,933,046
Accession: 1157
RBP type: canonical RBP
Summary: Bystin is expressed as a 2-kb major transcript and a 3.6-kb minor transcript in SNG-M cells and in human trophoblastic teratocarcinoma HT-H cells. Protein binding assays determined that bystin binds directly to trophinin and tastin, and that binding is enhanced when cytokeratins 8 and 18 are present. Immunocytochemistry of HT-H cells showed that bystin colocalizes with trophinin, tastin, and the cytokeratins, suggesting that these molecules form a complex in trophectoderm cells at the time of implantation. Using immunohistochemistry it was determined that trophinin and bystin are found in the placenta from the sixth week of pregnancy. Both proteins were localized in the cytoplasm of the syncytiotrophoblast in the chorionic villi and in endometrial decidual cells at the uteroplacental interface. After week 10, the levels of trophinin, tastin, and bystin decreased and then disappeared from placental villi. [provided by RefSeq, Jul 2008]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000230340	Bystin	PF05291.11	4.9e-138	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000230340	BYSL-201	2029	-	ENSP00000230340	437 (aa)	-	Q13895
ENST00000475702	BYSL-203	670	-	-	- (aa)	-	-
ENST00000372996	BYSL-202	1299	-	ENSP00000362087	183 (aa)	-	H7BY94
ENST00000489290	BYSL-204	1153	-	ENSP00000417813	194 (aa)	-	F8WBL2
ENST00000494032	BYSL-205	572	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000112578's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000112578	Menarche	1E-12	25231870
ENSG00000112578	Menarche	5E-8	27182965

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000112578	rs2479724	6	41923244	T	Menarche (age at onset)	25231870	[0.02-0.04] unit increase	0.03	EFO_0004703
ENSG00000112578	rs9349203	6	41925585	?	Menarche (age at onset)	27182965	[0.015-0.032] unit increase	0.024	EFO_0004703

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000112578's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000112578	BYSL	95	85.876	ENSAPOG00000017917	bysl	99	73.933	Acanthochromis_polyacanthus
ENSG00000112578	BYSL	100	94.508	ENSAMEG00000013033	BYSL	100	94.508	Ailuropoda_melanoleuca
ENSG00000112578	BYSL	84	88.961	ENSACIG00000019537	bysl	99	86.184	Amphilophus_citrinellus
ENSG00000112578	BYSL	95	85.311	ENSAOCG00000001625	bysl	99	73.708	Amphiprion_ocellaris
ENSG00000112578	BYSL	95	85.311	ENSAPEG00000014739	bysl	99	73.708	Amphiprion_percula
ENSG00000112578	BYSL	91	90.419	ENSATEG00000006316	bysl	99	74.266	Anabas_testudineus
ENSG00000112578	BYSL	95	87.006	ENSAPLG00000008733	BYSL	99	81.194	Anas_platyrhynchos
ENSG00000112578	BYSL	97	85.955	ENSACAG00000003079	BYSL	92	75.000	Anolis_carolinensis
ENSG00000112578	BYSL	100	97.025	ENSANAG00000036138	BYSL	100	97.025	Aotus_nancymaae
ENSG00000112578	BYSL	96	83.889	ENSACLG00000022434	bysl	99	74.603	Astatotilapia_calliptera
ENSG00000112578	BYSL	93	85.380	ENSAMXG00000008799	bysl	98	73.563	Astyanax_mexicanus
ENSG00000112578	BYSL	100	93.135	ENSBTAG00000010101	BYSL	100	93.135	Bos_taurus
ENSG00000112578	BYSL	93	55.172	WBGene00000276	byn-1	92	51.069	Caenorhabditis_elegans
ENSG00000112578	BYSL	100	96.110	ENSCJAG00000004266	BYSL	100	96.110	Callithrix_jacchus
ENSG00000112578	BYSL	97	96.629	ENSCAFG00000001614	BYSL	100	93.364	Canis_familiaris
ENSG00000112578	BYSL	97	96.629	ENSCAFG00020008426	BYSL	100	93.364	Canis_lupus_dingo
ENSG00000112578	BYSL	100	94.050	ENSCHIG00000017590	BYSL	73	94.050	Capra_hircus
ENSG00000112578	BYSL	100	94.050	ENSTSYG00000029904	BYSL	100	94.050	Carlito_syrichta
ENSG00000112578	BYSL	79	97.931	ENSCAPG00000015987	BYSL	100	97.279	Cavia_aperea
ENSG00000112578	BYSL	100	93.364	ENSCPOG00000004403	BYSL	100	93.364	Cavia_porcellus
ENSG00000112578	BYSL	100	96.339	ENSCCAG00000036583	BYSL	100	96.339	Cebus_capucinus
ENSG00000112578	BYSL	100	97.941	ENSCATG00000039266	BYSL	100	97.941	Cercocebus_atys
ENSG00000112578	BYSL	100	93.822	ENSCLAG00000014143	BYSL	100	93.822	Chinchilla_lanigera
ENSG00000112578	BYSL	100	97.941	ENSCSAG00000011306	BYSL	100	97.941	Chlorocebus_sabaeus
ENSG00000112578	BYSL	72	96.889	ENSCHOG00000011476	BYSL	72	96.889	Choloepus_hoffmanni
ENSG00000112578	BYSL	97	88.764	ENSCPBG00000017439	BYSL	100	74.439	Chrysemys_picta_bellii
ENSG00000112578	BYSL	90	66.463	ENSCING00000001646	-	96	55.269	Ciona_intestinalis
ENSG00000112578	BYSL	91	65.663	ENSCSAVG00000008659	-	96	54.206	Ciona_savignyi
ENSG00000112578	BYSL	100	97.941	ENSCANG00000031335	BYSL	100	97.941	Colobus_angolensis_palliatus
ENSG00000112578	BYSL	63	93.913	ENSCGRG00001007527	-	99	81.433	Cricetulus_griseus_chok1gshd
ENSG00000112578	BYSL	78	75.497	ENSCGRG00001022668	-	86	94.030	Cricetulus_griseus_chok1gshd
ENSG00000112578	BYSL	100	83.982	ENSCGRG00001006626	-	100	84.668	Cricetulus_griseus_chok1gshd
ENSG00000112578	BYSL	77	92.857	ENSCGRG00001008990	-	91	91.901	Cricetulus_griseus_chok1gshd
ENSG00000112578	BYSL	93	81.176	ENSCGRG00001010109	-	98	77.014	Cricetulus_griseus_chok1gshd
ENSG00000112578	BYSL	78	76.923	ENSCGRG00000002253	-	100	73.129	Cricetulus_griseus_crigri
ENSG00000112578	BYSL	79	91.034	ENSCGRG00000016274	-	100	80.537	Cricetulus_griseus_crigri
ENSG00000112578	BYSL	100	85.102	ENSCGRG00000000072	-	100	85.327	Cricetulus_griseus_crigri
ENSG00000112578	BYSL	97	86.150	ENSCGRG00000016761	-	99	86.854	Cricetulus_griseus_crigri
ENSG00000112578	BYSL	99	83.991	ENSCGRG00000013448	-	97	84.919	Cricetulus_griseus_crigri
ENSG00000112578	BYSL	97	86.517	ENSCSEG00000002246	bysl	95	75.227	Cynoglossus_semilaevis
ENSG00000112578	BYSL	97	85.955	ENSCVAG00000023275	bysl	99	74.661	Cyprinodon_variegatus
ENSG00000112578	BYSL	91	86.228	ENSDARG00000001057	bysl	89	74.014	Danio_rerio
ENSG00000112578	BYSL	100	94.050	ENSDNOG00000016670	BYSL	100	94.050	Dasypus_novemcinctus
ENSG00000112578	BYSL	100	92.220	ENSDORG00000010968	Bysl	100	92.220	Dipodomys_ordii
ENSG00000112578	BYSL	92	56.471	FBgn0010292	bys	92	51.435	Drosophila_melanogaster
ENSG00000112578	BYSL	99	68.981	ENSETEG00000018226	BYSL	99	68.981	Echinops_telfairi
ENSG00000112578	BYSL	92	77.381	ENSEBUG00000000925	bysl	96	66.125	Eptatretus_burgeri
ENSG00000112578	BYSL	100	95.652	ENSEASG00005003059	BYSL	100	95.652	Equus_asinus_asinus
ENSG00000112578	BYSL	100	95.881	ENSECAG00000021260	BYSL	100	95.881	Equus_caballus
ENSG00000112578	BYSL	91	89.222	ENSELUG00000014214	bysl	97	73.363	Esox_lucius
ENSG00000112578	BYSL	100	96.568	ENSFCAG00000026154	BYSL	100	96.568	Felis_catus
ENSG00000112578	BYSL	79	93.103	ENSFALG00000002897	BYSL	96	84.746	Ficedula_albicollis
ENSG00000112578	BYSL	97	94.382	ENSFDAG00000014804	BYSL	100	87.643	Fukomys_damarensis
ENSG00000112578	BYSL	91	90.419	ENSFHEG00000005147	bysl	99	75.278	Fundulus_heteroclitus
ENSG00000112578	BYSL	94	84.302	ENSGMOG00000008061	bysl	99	72.146	Gadus_morhua
ENSG00000112578	BYSL	97	83.708	ENSGALG00000003467	BYSL	98	73.953	Gallus_gallus
ENSG00000112578	BYSL	91	87.425	ENSGAFG00000021598	bysl	98	72.893	Gambusia_affinis
ENSG00000112578	BYSL	91	89.222	ENSGACG00000001059	bysl	99	73.034	Gasterosteus_aculeatus
ENSG00000112578	BYSL	97	88.764	ENSGAGG00000017774	BYSL	100	74.664	Gopherus_agassizii
ENSG00000112578	BYSL	100	99.542	ENSGGOG00000027046	BYSL	100	99.542	Gorilla_gorilla
ENSG00000112578	BYSL	96	83.889	ENSHBUG00000002896	bysl	99	74.603	Haplochromis_burtoni
ENSG00000112578	BYSL	100	92.449	ENSHGLG00000017479	BYSL	100	92.449	Heterocephalus_glaber_female
ENSG00000112578	BYSL	100	92.449	ENSHGLG00100011829	BYSL	100	92.449	Heterocephalus_glaber_male
ENSG00000112578	BYSL	95	85.632	ENSHCOG00000005390	bysl	99	71.783	Hippocampus_comes
ENSG00000112578	BYSL	91	87.425	ENSIPUG00000017509	BYSL	94	74.880	Ictalurus_punctatus
ENSG00000112578	BYSL	100	93.364	ENSSTOG00000021848	BYSL	99	93.364	Ictidomys_tridecemlineatus
ENSG00000112578	BYSL	83	86.755	ENSJJAG00000003859	-	100	78.548	Jaculus_jaculus
ENSG00000112578	BYSL	97	95.506	ENSJJAG00000023129	-	100	91.991	Jaculus_jaculus
ENSG00000112578	BYSL	94	87.209	ENSKMAG00000021439	bysl	99	73.333	Kryptolebias_marmoratus
ENSG00000112578	BYSL	91	89.222	ENSLOCG00000012661	bysl	97	74.032	Lepisosteus_oculatus
ENSG00000112578	BYSL	97	95.506	ENSLAFG00000015418	BYSL	100	94.430	Loxodonta_africana
ENSG00000112578	BYSL	100	97.941	ENSMFAG00000033214	BYSL	100	97.941	Macaca_fascicularis
ENSG00000112578	BYSL	100	97.712	ENSMMUG00000004416	BYSL	99	97.712	Macaca_mulatta
ENSG00000112578	BYSL	100	97.712	ENSMNEG00000043045	BYSL	100	97.712	Macaca_nemestrina
ENSG00000112578	BYSL	100	97.941	ENSMLEG00000041724	BYSL	100	97.941	Mandrillus_leucophaeus
ENSG00000112578	BYSL	92	89.286	ENSMAMG00000023910	bysl	99	73.923	Mastacembelus_armatus
ENSG00000112578	BYSL	93	87.059	ENSMZEG00005011046	bysl	99	74.376	Maylandia_zebra
ENSG00000112578	BYSL	60	96.364	ENSMGAG00000006299	BYSL	97	86.508	Meleagris_gallopavo
ENSG00000112578	BYSL	68	96.135	ENSMAUG00000010845	Bysl	100	96.135	Mesocricetus_auratus
ENSG00000112578	BYSL	100	94.966	ENSMICG00000011347	BYSL	100	94.966	Microcebus_murinus
ENSG00000112578	BYSL	97	95.506	ENSMOCG00000002210	Bysl	100	93.364	Microtus_ochrogaster
ENSG00000112578	BYSL	84	90.909	ENSMMOG00000021768	bysl	99	85.526	Mola_mola
ENSG00000112578	BYSL	97	89.888	ENSMODG00000012808	BYSL	100	83.371	Monodelphis_domestica
ENSG00000112578	BYSL	92	88.757	ENSMALG00000018147	bysl	99	72.912	Monopterus_albus
ENSG00000112578	BYSL	97	93.258	MGP_CAROLIEiJ_G0021703	Bysl	100	89.931	Mus_caroli
ENSG00000112578	BYSL	97	93.820	ENSMUSG00000023988	Bysl	100	90.618	Mus_musculus
ENSG00000112578	BYSL	97	95.506	MGP_PahariEiJ_G0020693	Bysl	100	91.762	Mus_pahari
ENSG00000112578	BYSL	97	93.820	MGP_SPRETEiJ_G0022615	Bysl	100	90.389	Mus_spretus
ENSG00000112578	BYSL	97	96.629	ENSMPUG00000013486	BYSL	100	93.593	Mustela_putorius_furo
ENSG00000112578	BYSL	100	94.737	ENSMLUG00000014028	BYSL	100	94.737	Myotis_lucifugus
ENSG00000112578	BYSL	78	98.601	ENSNGAG00000005496	Bysl	100	98.288	Nannospalax_galili
ENSG00000112578	BYSL	96	83.889	ENSNBRG00000006639	bysl	99	74.434	Neolamprologus_brichardi
ENSG00000112578	BYSL	100	88.787	ENSNLEG00000032809	BYSL	100	88.787	Nomascus_leucogenys
ENSG00000112578	BYSL	79	95.139	ENSMEUG00000000759	BYSL	100	89.761	Notamacropus_eugenii
ENSG00000112578	BYSL	100	93.822	ENSOPRG00000015845	BYSL	100	93.822	Ochotona_princeps
ENSG00000112578	BYSL	100	91.991	ENSODEG00000016059	BYSL	100	91.991	Octodon_degus
ENSG00000112578	BYSL	93	85.882	ENSONIG00000018932	bysl	99	73.756	Oreochromis_niloticus
ENSG00000112578	BYSL	100	94.737	ENSOCUG00000017567	BYSL	100	94.737	Oryctolagus_cuniculus
ENSG00000112578	BYSL	92	88.690	ENSORLG00000000248	bysl	99	73.815	Oryzias_latipes
ENSG00000112578	BYSL	92	88.095	ENSORLG00020008275	bysl	99	73.589	Oryzias_latipes_hni
ENSG00000112578	BYSL	92	88.690	ENSORLG00015004475	bysl	99	73.815	Oryzias_latipes_hsok
ENSG00000112578	BYSL	92	89.286	ENSOMEG00000015003	bysl	99	73.767	Oryzias_melastigma
ENSG00000112578	BYSL	100	94.966	ENSOGAG00000015234	BYSL	100	94.966	Otolemur_garnettii
ENSG00000112578	BYSL	97	94.475	ENSOARG00000002863	BYSL	100	92.553	Ovis_aries
ENSG00000112578	BYSL	100	99.771	ENSPPAG00000028063	BYSL	100	99.771	Pan_paniscus
ENSG00000112578	BYSL	100	96.568	ENSPPRG00000010500	BYSL	100	96.568	Panthera_pardus
ENSG00000112578	BYSL	100	96.568	ENSPTIG00000010244	BYSL	100	96.568	Panthera_tigris_altaica
ENSG00000112578	BYSL	100	99.771	ENSPTRG00000018163	BYSL	100	99.771	Pan_troglodytes
ENSG00000112578	BYSL	100	97.712	ENSPANG00000007619	BYSL	100	97.712	Papio_anubis
ENSG00000112578	BYSL	91	86.145	ENSPKIG00000001265	bysl	98	73.441	Paramormyrops_kingsleyae
ENSG00000112578	BYSL	97	89.326	ENSPSIG00000009405	BYSL	100	75.730	Pelodiscus_sinensis
ENSG00000112578	BYSL	97	84.746	ENSPMGG00000004006	bysl	99	73.576	Periophthalmus_magnuspinnatus
ENSG00000112578	BYSL	97	95.506	ENSPEMG00000022283	Bysl	99	96.980	Peromyscus_maniculatus_bairdii
ENSG00000112578	BYSL	94	85.549	ENSPMAG00000000953	bysl	96	78.507	Petromyzon_marinus
ENSG00000112578	BYSL	97	88.202	ENSPCIG00000025889	BYSL	100	82.916	Phascolarctos_cinereus
ENSG00000112578	BYSL	94	86.047	ENSPFOG00000000406	bysl	98	73.516	Poecilia_formosa
ENSG00000112578	BYSL	94	86.047	ENSPLAG00000013506	bysl	98	73.516	Poecilia_latipinna
ENSG00000112578	BYSL	94	86.047	ENSPMEG00000004461	bysl	98	73.744	Poecilia_mexicana
ENSG00000112578	BYSL	92	86.905	ENSPREG00000004437	bysl	99	72.321	Poecilia_reticulata
ENSG00000112578	BYSL	97	93.820	ENSPPYG00000017273	-	100	95.259	Pongo_abelii
ENSG00000112578	BYSL	80	91.304	ENSPCAG00000004575	BYSL	80	91.304	Procavia_capensis
ENSG00000112578	BYSL	100	79.634	ENSPCOG00000003664	-	100	79.634	Propithecus_coquereli
ENSG00000112578	BYSL	100	95.652	ENSPCOG00000020727	-	100	95.652	Propithecus_coquereli
ENSG00000112578	BYSL	100	94.966	ENSPVAG00000007606	BYSL	100	94.966	Pteropus_vampyrus
ENSG00000112578	BYSL	96	83.889	ENSPNYG00000007839	bysl	99	74.603	Pundamilia_nyererei
ENSG00000112578	BYSL	93	86.550	ENSPNAG00000010533	bysl	98	72.286	Pygocentrus_nattereri
ENSG00000112578	BYSL	97	95.506	ENSRNOG00000049121	Bysl	100	90.847	Rattus_norvegicus
ENSG00000112578	BYSL	100	97.712	ENSRBIG00000030183	BYSL	100	97.712	Rhinopithecus_bieti
ENSG00000112578	BYSL	99	96.568	ENSRROG00000030276	-	98	97.877	Rhinopithecus_roxellana
ENSG00000112578	BYSL	100	97.712	ENSRROG00000007843	-	100	97.712	Rhinopithecus_roxellana
ENSG00000112578	BYSL	98	33.747	YBR247C	ENP1	97	35.789	Saccharomyces_cerevisiae
ENSG00000112578	BYSL	100	96.110	ENSSBOG00000034517	BYSL	100	96.110	Saimiri_boliviensis_boliviensis
ENSG00000112578	BYSL	97	88.333	ENSSHAG00000003954	BYSL	98	84.101	Sarcophilus_harrisii
ENSG00000112578	BYSL	92	86.905	ENSSFOG00015016401	bysl	98	73.227	Scleropages_formosus
ENSG00000112578	BYSL	86	89.172	ENSSMAG00000000371	bysl	99	72.973	Scophthalmus_maximus
ENSG00000112578	BYSL	97	84.270	ENSSDUG00000009127	bysl	99	74.376	Seriola_dumerili
ENSG00000112578	BYSL	97	84.270	ENSSLDG00000022707	bysl	99	74.376	Seriola_lalandi_dorsalis
ENSG00000112578	BYSL	97	88.764	ENSSPUG00000007702	BYSL	99	70.115	Sphenodon_punctatus
ENSG00000112578	BYSL	91	88.623	ENSSPAG00000013378	bysl	99	73.708	Stegastes_partitus
ENSG00000112578	BYSL	100	90.389	ENSSSCG00000026752	BYSL	100	90.389	Sus_scrofa
ENSG00000112578	BYSL	97	86.517	ENSTRUG00000008963	bysl	99	82.895	Takifugu_rubripes
ENSG00000112578	BYSL	91	89.820	ENSTNIG00000014648	bysl	99	75.459	Tetraodon_nigroviridis
ENSG00000112578	BYSL	79	99.306	ENSTBEG00000009332	-	67	95.563	Tupaia_belangeri
ENSG00000112578	BYSL	97	94.944	ENSTTRG00000009429	BYSL	100	85.584	Tursiops_truncatus
ENSG00000112578	BYSL	97	97.753	ENSUAMG00000027838	BYSL	100	94.737	Ursus_americanus
ENSG00000112578	BYSL	100	86.848	ENSUMAG00000011988	BYSL	100	86.848	Ursus_maritimus
ENSG00000112578	BYSL	97	95.506	ENSVPAG00000005678	BYSL	81	93.939	Vicugna_pacos
ENSG00000112578	BYSL	97	96.629	ENSVVUG00000026680	BYSL	100	93.364	Vulpes_vulpes
ENSG00000112578	BYSL	97	84.270	ENSXETG00000011846	bysl	100	73.744	Xenopus_tropicalis
ENSG00000112578	BYSL	92	86.905	ENSXCOG00000003684	bysl	98	69.074	Xiphophorus_couchianus
ENSG00000112578	BYSL	94	85.465	ENSXMAG00000001060	bysl	98	72.562	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	-	IEA	Process
GO:0001829	trophectodermal cell differentiation	-	IEA	Process
GO:0003723	RNA binding	22658674.	HDA	Function
GO:0005515	protein binding	9560222.16189514.16713569.17360433.21516116.25416956.27107012.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IDA	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	-	TAS	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0007155	cell adhesion	9560222.	TAS	Process
GO:0007565	female pregnancy	9560222.	TAS	Process
GO:0008283	cell proliferation	-	IEA	Process
GO:0016020	membrane	19946888.	HDA	Component
GO:0030515	snoRNA binding	21873635.	IBA	Function
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component
GO:0043231	intracellular membrane-bounded organelle	-	IDA	Component
GO:0045177	apical part of cell	-	IEA	Component

EuRBPDB

Note: to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.