Cancer | Chr | Position | Mutation Type | dbSNP | Protein-change | Allele Freq | RBD |
---|---|---|---|---|---|---|---|
ACC | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
CESC | |||||||
CESC | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
GBM | |||||||
GBM | |||||||
HNSC | |||||||
HNSC | |||||||
HNSC | |||||||
HNSC | |||||||
KIRC | |||||||
KIRC | |||||||
KIRC | |||||||
KIRC | |||||||
KIRP | |||||||
KIRP | |||||||
LGG | |||||||
LGG | |||||||
LIHC | |||||||
LIHC | |||||||
LUAD | |||||||
LUAD | |||||||
LUAD | |||||||
LUAD | |||||||
LUAD | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
MESO | |||||||
MESO | |||||||
OV | |||||||
PRAD | |||||||
PRAD | |||||||
READ | |||||||
READ | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
THCA | |||||||
THCA | |||||||
THCA | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC |
Cancer | Type | Freq | Q-value |
---|---|---|---|
CHOL | |||
COAD | |||
HNSC | |||
LUAD | |||
LUSC | |||
MESO | |||
STAD | |||
THCA |
Cancer | P-value | Q-value |
---|---|---|
KIRC | ||
STAD | ||
MESO | ||
UCS | ||
HNSC | ||
SKCM | ||
BRCA | ||
KIRP | ||
PAAD | ||
PCPG | ||
READ | ||
KICH | ||
GBM | ||
LGG | ||
THCA | ||
LUAD | ||
OV |
Protein ID | Domain | Pfam ID | E-value | Domain number | Total number |
---|---|---|---|---|---|
ENSP00000423841 | Arb2 | PF09757.9 | 6.1e-09 | 1 | 1 |
ENSP00000379294 | Arb2 | PF09757.9 | 9.5e-09 | 1 | 1 |
Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENST00000395965 | FAM172A-201 | 4312 | XM_005272103 | ENSP00000379294 | 416 (aa) | XP_005272160 | Q8WUF8 |
ENST00000504768 | FAM172A-203 | 803 | - | - | - (aa) | - | - |
ENST00000510445 | FAM172A-208 | 557 | - | - | - (aa) | - | - |
ENST00000511139 | FAM172A-209 | 310 | - | - | - (aa) | - | - |
ENST00000505869 | FAM172A-204 | 1387 | - | ENSP00000426284 | 306 (aa) | - | Q8WUF8 |
ENST00000509163 | FAM172A-206 | 1369 | XM_005272110 | ENSP00000423841 | 370 (aa) | XP_005272167 | Q8WUF8 |
ENST00000509739 | FAM172A-207 | 1031 | XM_005272108 | ENSP00000421834 | 269 (aa) | XP_005272165 | B4DMI0 |
ENST00000502503 | FAM172A-202 | 1392 | - | ENSP00000424097 | 305 (aa) | - | E9PBM2 |
ENST00000506398 | FAM172A-205 | 965 | - | - | - (aa) | - | - |
ensgID | Trait | pValue | Pubmed ID |
---|---|---|---|
ENSG00000113391 | Respiratory Function Tests | 1.49124712248664E-7 | 17903307 |
ENSG00000113391 | Respiratory Function Tests | 1.8826612439496E-8 | 17903307 |
ENSG00000113391 | Respiratory Function Tests | 6.74895090126207E-6 | 17903307 |
ENSG00000113391 | Body Mass Index | 7.22887279638772E-7 | 17903300 |
ENSG00000113391 | Body Mass Index | 1.10469151797701E-5 | 17903300 |
ENSG00000113391 | Body Weight | 2.67278059279839E-6 | 17903300 |
ENSG00000113391 | Body Weight | 5.96812595477305E-6 | 17903300 |
ENSG00000113391 | Body Weight | 1.58845836324054E-7 | 17903300 |
ENSG00000113391 | Body Weight | 8.26936159252969E-6 | 17903300 |
ENSG00000113391 | Body Weight | 3.44588844138233E-6 | 17903300 |
ENSG00000113391 | Body Weight | 3.63822870074558E-7 | 17903300 |
ENSG00000113391 | Platelet Function Tests | 1.9066600E-005 | - |
ENSG00000113391 | Platelet Function Tests | 2.7864800E-005 | - |
ensgID | SNP | Chromosome | Position | SNP-risk | Trait | PubmedID | 95% CI | Or or BEAT | EFO ID |
---|---|---|---|---|---|---|---|---|---|
ENSG00000113391 | rs113647342 | 5 | 93762365 | T | Neuroticism | 29255261 | z score increase | 5.479 | EFO_0007660 |
ENSG00000113391 | rs6874223 | 5 | 93877763 | A | Neuroticism | 29255261 | z score increase | 4.87 | EFO_0007660 |
ENSG00000113391 | rs72786644 | 5 | 93702893 | A | Educational attainment (MTAG) | 30038396 | [0.0085-0.0151] unit increase | 0.0118 | EFO_0004784 |
ENSG00000113391 | rs72788321 | 5 | 93967339 | G | Self-reported math ability | 30038396 | [0.029-0.052] unit increase | 0.0405 | EFO_0004875 |
ENSG00000113391 | rs115136616 | 5 | 93685410 | C | Highest math class taken | 30038396 | [0.026-0.047] unit decrease | 0.0367 | EFO_0004875 |
ENSG00000113391 | rs71641008 | 5 | 94077633 | T | Self-reported math ability (MTAG) | 30038396 | [0.022-0.041] unit decrease | 0.0314 | EFO_0004875 |
ENSG00000113391 | rs62366053 | 5 | 94053622 | ? | Reaction time | 29844566 | [0.0051-0.0119] unit decrease | 0.0085001 | EFO_0008393 |
ENSG00000113391 | rs12332731 | 5 | 93697376 | A | Educational attainment (years of education) | 30038396 | [0.01-0.017] unit increase | 0.0135 | EFO_0004784 |
ENSG00000113391 | rs55736786 | 5 | 93758412 | T | Hippocampal tail volume (corrected for total hippocampal volume) | 30279459 | NR mm3 decrease | 8.59 | EFO_0009398 |
ENSG00000113391 | rs10061069 | 5 | 93735924 | G | Depression | 30718901 | [1.02-1.03] | 1.025641 | EFO_0003761 |
ENSG00000113391 | rs71641008 | 5 | 94077633 | ? | Aspartate aminotransferase levels in low alcohol consumption | 30589442 | [0.044-0.109] unit increase | 0.0763 | EFO_0004736|EFO_0007878 |
ENSG00000113391 | rs13184801 | 5 | 93760836 | G | Neuroticism | 30643256 | [0.0063-0.0132] unit decrease | 0.009756338 | EFO_0007660 |
ENSG00000113391 | rs13184801 | 5 | 93760836 | G | Depressive symptoms | 30643256 | [0.004-0.0085] unit decrease | 0.006273017 | EFO_0007006 |
ENSG00000113391 | rs10061069 | 5 | 93735924 | C | Well-being spectrum (multivariate analysis) | 30643256 | [0.0039-0.0082] unit decrease | 0.006036171 | EFO_0007869 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSG00000113391 | FAM172A | 83 | 37.991 | ENSAPLG00000011555 | - | 97 | 38.961 | Anas_platyrhynchos |
ENSG00000113391 | FAM172A | 100 | 89.873 | ENSAPLG00000004055 | FAM172A | 97 | 88.366 | Anas_platyrhynchos |
ENSG00000113391 | FAM172A | 88 | 91.139 | ENSACAG00000013305 | FAM172A | 95 | 89.344 | Anolis_carolinensis |
ENSG00000113391 | FAM172A | 90 | 95.000 | ENSANAG00000035869 | FAM172A | 93 | 95.455 | Aotus_nancymaae |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSBTAG00000050195 | FAM172A | 100 | 97.356 | Bos_taurus |
ENSG00000113391 | FAM172A | 100 | 99.038 | ENSCJAG00000010444 | FAM172A | 100 | 99.038 | Callithrix_jacchus |
ENSG00000113391 | FAM172A | 89 | 98.378 | ENSCAFG00000008064 | FAM172A | 99 | 98.378 | Canis_familiaris |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSCAFG00020006210 | FAM172A | 100 | 96.875 | Canis_lupus_dingo |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSCHIG00000008440 | FAM172A | 100 | 97.115 | Capra_hircus |
ENSG00000113391 | FAM172A | 87 | 96.992 | ENSTSYG00000006286 | FAM172A | 85 | 96.992 | Carlito_syrichta |
ENSG00000113391 | FAM172A | 63 | 97.500 | ENSCAPG00000014103 | - | 100 | 97.500 | Cavia_aperea |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSCCAG00000023116 | FAM172A | 100 | 98.558 | Cebus_capucinus |
ENSG00000113391 | FAM172A | 100 | 97.468 | ENSCLAG00000005472 | FAM172A | 100 | 97.468 | Chinchilla_lanigera |
ENSG00000113391 | FAM172A | 95 | 51.852 | ENSCPBG00000004402 | - | 96 | 44.173 | Chrysemys_picta_bellii |
ENSG00000113391 | FAM172A | 94 | 98.958 | ENSCANG00000040412 | FAM172A | 98 | 98.958 | Colobus_angolensis_palliatus |
ENSG00000113391 | FAM172A | 100 | 97.596 | ENSDNOG00000004689 | FAM172A | 100 | 97.596 | Dasypus_novemcinctus |
ENSG00000113391 | FAM172A | 100 | 92.459 | ENSDORG00000013558 | Fam172a | 97 | 92.459 | Dipodomys_ordii |
ENSG00000113391 | FAM172A | 89 | 40.000 | ENSEBUG00000016097 | - | 62 | 40.000 | Eptatretus_burgeri |
ENSG00000113391 | FAM172A | 100 | 96.203 | ENSECAG00000018274 | FAM172A | 97 | 94.568 | Equus_caballus |
ENSG00000113391 | FAM172A | 91 | 95.522 | ENSEEUG00000002887 | FAM172A | 97 | 84.444 | Erinaceus_europaeus |
ENSG00000113391 | FAM172A | 99 | 68.901 | ENSELUG00000017647 | fam172a | 96 | 69.287 | Esox_lucius |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSFCAG00000025443 | FAM172A | 100 | 97.837 | Felis_catus |
ENSG00000113391 | FAM172A | 96 | 44.011 | ENSFALG00000006501 | - | 100 | 44.011 | Ficedula_albicollis |
ENSG00000113391 | FAM172A | 88 | 89.538 | ENSFALG00000009072 | FAM172A | 95 | 90.141 | Ficedula_albicollis |
ENSG00000113391 | FAM172A | 100 | 89.459 | ENSGALG00000014661 | FAM172A | 97 | 89.109 | Gallus_gallus |
ENSG00000113391 | FAM172A | 92 | 56.923 | ENSGAGG00000022828 | - | 93 | 45.609 | Gopherus_agassizii |
ENSG00000113391 | FAM172A | 100 | 93.671 | ENSGAGG00000003839 | FAM172A | 97 | 92.079 | Gopherus_agassizii |
ENSG00000113391 | FAM172A | 100 | 99.279 | ENSGGOG00000010296 | FAM172A | 100 | 99.279 | Gorilla_gorilla |
ENSG00000113391 | FAM172A | 100 | 96.203 | ENSHGLG00000011178 | FAM172A | 100 | 96.203 | Heterocephalus_glaber_female |
ENSG00000113391 | FAM172A | 89 | 97.019 | ENSHGLG00100013340 | FAM172A | 100 | 96.203 | Heterocephalus_glaber_male |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSSTOG00000009918 | FAM172A | 100 | 97.356 | Ictidomys_tridecemlineatus |
ENSG00000113391 | FAM172A | 98 | 47.671 | ENSLACG00000001532 | si:ch73-41e3.7 | 100 | 46.950 | Latimeria_chalumnae |
ENSG00000113391 | FAM172A | 100 | 75.871 | ENSLOCG00000001629 | fam172a | 97 | 77.037 | Lepisosteus_oculatus |
ENSG00000113391 | FAM172A | 94 | 98.611 | ENSMFAG00000001171 | FAM172A | 98 | 98.611 | Macaca_fascicularis |
ENSG00000113391 | FAM172A | 100 | 99.459 | ENSMNEG00000039938 | FAM172A | 98 | 98.611 | Macaca_nemestrina |
ENSG00000113391 | FAM172A | 57 | 43.949 | ENSMGAG00000016079 | - | 74 | 43.949 | Meleagris_gallopavo |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSMICG00000030403 | FAM172A | 100 | 98.558 | Microcebus_murinus |
ENSG00000113391 | FAM172A | 100 | 96.203 | ENSMOCG00000003613 | Fam172a | 100 | 94.054 | Microtus_ochrogaster |
ENSG00000113391 | FAM172A | 100 | 92.405 | ENSMODG00000020131 | FAM172A | 97 | 90.594 | Monodelphis_domestica |
ENSG00000113391 | FAM172A | 100 | 93.791 | MGP_PahariEiJ_G0015818 | Fam172a | 100 | 94.937 | Mus_pahari |
ENSG00000113391 | FAM172A | 100 | 100.000 | ENSNGAG00000019570 | Fam172a | 100 | 97.568 | Nannospalax_galili |
ENSG00000113391 | FAM172A | 98 | 96.990 | ENSNLEG00000013903 | FAM172A | 98 | 96.990 | Nomascus_leucogenys |
ENSG00000113391 | FAM172A | 88 | 90.741 | ENSOANG00000011068 | FAM172A | 95 | 91.292 | Ornithorhynchus_anatinus |
ENSG00000113391 | FAM172A | 97 | 97.772 | ENSOCUG00000007299 | FAM172A | 96 | 97.531 | Oryctolagus_cuniculus |
ENSG00000113391 | FAM172A | 100 | 96.394 | ENSOGAG00000015189 | FAM172A | 100 | 96.394 | Otolemur_garnettii |
ENSG00000113391 | FAM172A | 89 | 98.734 | ENSOARG00000016711 | FAM172A | 85 | 94.355 | Ovis_aries |
ENSG00000113391 | FAM172A | 96 | 97.619 | ENSPPAG00000030542 | FAM172A | 99 | 97.619 | Pan_paniscus |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSPPRG00000006653 | FAM172A | 100 | 97.837 | Panthera_pardus |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSPTIG00000012681 | FAM172A | 100 | 97.837 | Panthera_tigris_altaica |
ENSG00000113391 | FAM172A | 96 | 97.619 | ENSPTRG00000017074 | FAM172A | 99 | 97.619 | Pan_troglodytes |
ENSG00000113391 | FAM172A | 94 | 98.611 | ENSPANG00000011687 | FAM172A | 98 | 98.611 | Papio_anubis |
ENSG00000113391 | FAM172A | 97 | 74.167 | ENSPKIG00000012314 | fam172a | 96 | 83.516 | Paramormyrops_kingsleyae |
ENSG00000113391 | FAM172A | 59 | 93.750 | ENSPSIG00000010144 | - | 100 | 93.750 | Pelodiscus_sinensis |
ENSG00000113391 | FAM172A | 100 | 97.468 | ENSPEMG00000009604 | - | 100 | 97.468 | Peromyscus_maniculatus_bairdii |
ENSG00000113391 | FAM172A | 100 | 93.671 | ENSPCIG00000028612 | FAM172A | 97 | 90.594 | Phascolarctos_cinereus |
ENSG00000113391 | FAM172A | 100 | 90.335 | ENSPCOG00000024072 | FAM172A | 96 | 95.378 | Propithecus_coquereli |
ENSG00000113391 | FAM172A | 89 | 94.465 | ENSRNOG00000013844 | Fam172a | 100 | 94.465 | Rattus_norvegicus |
ENSG00000113391 | FAM172A | 81 | 78.027 | ENSRBIG00000028680 | - | 79 | 93.820 | Rhinopithecus_bieti |
ENSG00000113391 | FAM172A | 94 | 98.958 | ENSRROG00000023807 | FAM172A | 98 | 98.958 | Rhinopithecus_roxellana |
ENSG00000113391 | FAM172A | 100 | 98.798 | ENSSBOG00000019860 | FAM172A | 100 | 98.798 | Saimiri_boliviensis_boliviensis |
ENSG00000113391 | FAM172A | 100 | 93.671 | ENSSHAG00000013743 | FAM172A | 97 | 90.594 | Sarcophilus_harrisii |
ENSG00000113391 | FAM172A | 100 | 88.608 | ENSSPUG00000008161 | FAM172A | 97 | 88.614 | Sphenodon_punctatus |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSSSCG00000027608 | FAM172A | 100 | 98.108 | Sus_scrofa |
ENSG00000113391 | FAM172A | 100 | 88.608 | ENSTGUG00000000715 | FAM172A | 100 | 87.368 | Taeniopygia_guttata |
ENSG00000113391 | FAM172A | 88 | 62.295 | ENSTGUG00000013623 | - | 100 | 47.321 | Taeniopygia_guttata |
ENSG00000113391 | FAM172A | 77 | 79.747 | ENSTNIG00000009902 | fam172a | 99 | 59.036 | Tetraodon_nigroviridis |
ENSG00000113391 | FAM172A | 100 | 94.595 | ENSTTRG00000001521 | FAM172A | 97 | 94.321 | Tursiops_truncatus |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSUMAG00000005442 | FAM172A | 100 | 98.317 | Ursus_maritimus |
ENSG00000113391 | FAM172A | 100 | 98.734 | ENSVVUG00000022112 | FAM172A | 100 | 96.875 | Vulpes_vulpes |
ENSG00000113391 | FAM172A | 97 | 43.443 | ENSXETG00000033027 | - | 99 | 42.708 | Xenopus_tropicalis |
ENSG00000113391 | FAM172A | 100 | 82.210 | ENSXETG00000011592 | fam172a | 96 | 82.512 | Xenopus_tropicalis |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | - | ISS | Process |
GO:0005634 | nucleus | 21873635. | IBA | Component |
GO:0005634 | nucleus | - | ISS | Component |
GO:0005783 | endoplasmic reticulum | - | IDA | Component |
GO:0006397 | mRNA processing | - | IEA | Process |
GO:0008380 | RNA splicing | - | IEA | Process |
GO:0014032 | neural crest cell development | - | ISS | Process |
GO:0031048 | chromatin silencing by small RNA | 21873635. | IBA | Process |
GO:0035197 | siRNA binding | 21873635. | IBA | Function |