EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr14	77708131	Missense_Mutation	novel	R7T	0.17
BLCA	chr14	77708106	5'UTR	novel		0.15
CESC	chr14	77708084	5'UTR	novel		0.24
COAD	chr14	77708210	Splice_Site	NA	X33_splice	0.4
COAD	chr14	77708089	5'UTR	novel		0.28
HNSC	chr14	77708090	5'UTR	rs113904336		0.27
KIRC	chr14	77717537	In_Frame_Ins	novel	S102_D103insLL	0.05
LIHC	chr14	77708131	Missense_Mutation	NA	R7K	0.47
READ	chr14	77710884	Silent	NA	C48C	0.15
STAD	chr14	77708156	Silent	NA	S15S	0.15
STAD	chr14	77710866	Silent	rs201733692	F42F	0.26
STAD	chr14	77710874	Missense_Mutation	novel	V45A	0.37	RRM_1
STAD	chr14	77708191	Missense_Mutation	NA	P27L	0.4	RRM_1
STAD	chr14	77708117	Silent	rs374317411	A2A	0.31
STAD	chr14	77717552	Silent	NA	K107K	0.22
UCEC	chr14	77708131	Missense_Mutation	NA	R7K	0.34
UCEC	chr14	77715863	Missense_Mutation	novel	I83T	0.1	RRM_1
UCEC	chr14	77715836	Missense_Mutation	novel	R74Q	0.39	RRM_1
UCEC	chr14	77717596	3'UTR	novel		0.85
UCEC	chr14	77717597	3'UTR	novel		0.08
UCEC	chr14	77710849	Nonsense_Mutation	NA	E37*	0.18	RRM_1
UCEC	chr14	77715794	Missense_Mutation	novel	R60I	0.21	RRM_1
UCEC	chr14	77717571	3'UTR	novel		0.19
UCEC	chr14	77717596	3'UTR	novel		0.42

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
CHOL	DEL	0.5	0.00040262
COAD	DEL	0.2905	0.050084
GBM	DEL	0.2652	5.7274e-07
KIRC	DEL	0.3826	0.0074281
KIRP	DEL	0.1632	0.085174
LGG	DEL	0.2086	1.1681e-13
LUAD	DEL	0.1996	0.0018747
MESO	DEL	0.4138	0.088547
PAAD	DEL	0.0707	0.11332
READ	DEL	0.3576	0.189
SARC	DEL	0.2763	0.0013077
SKCM	DEL	0.2997	0.10277

Survival Analysis

Cancer	P-value	Q-value
ACC	0.042	Kaplan-Meier Survival Analysis
HNSC	0.0045	Kaplan-Meier Survival Analysis
LUSC	0.0025	Kaplan-Meier Survival Analysis
BRCA	0.031	Kaplan-Meier Survival Analysis
ESCA	0.0014	Kaplan-Meier Survival Analysis
LAML	0.009	Kaplan-Meier Survival Analysis
KICH	0.032	Kaplan-Meier Survival Analysis
LGG	0.0022	Kaplan-Meier Survival Analysis
LUAD	0.0059	Kaplan-Meier Survival Analysis
UVM	0.00016	Kaplan-Meier Survival Analysis
OV	0.0066	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000119705 (Gene tree)
Gene ID: 81892
Gene Symbol: SLIRP
Alias: DC50|C14orf156
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 53,034 bases
Position: chr14:77,708,071-77,761,104
Accession: 20495
RBP type: canonical RBP
Summary: Steroid receptor RNA activator (SRA, or SRA1; MIM 603819) is a complex RNA molecule containing multiple stable stem-loop structures that functions in coactivation of nuclear receptors. SLIRP interacts with stem-loop structure-7 of SRA (STR7) and modulates nuclear receptor transactivation (Hatchell et al., 2006 [PubMed 16762838]).[supplied by OMIM, Mar 2008]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000452057	RRM_1	PF00076.22	8.1e-13	1	1
ENSP00000478794	RRM_1	PF00076.22	8.7e-13	1	1
ENSP00000450770	RRM_1	PF00076.22	1.1e-12	1	1
ENSP00000238688	RRM_1	PF00076.22	1.3e-12	1	1
ENSP00000450909	RRM_1	PF00076.22	1.4e-12	1	1
ENSP00000450849	RRM_1	PF00076.22	1.9e-12	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
16762838	SLIRP, a small SRA binding protein, is a nuclear receptor corepressor.	Mol Cell	2006 Jun 9	Hatchell EC	-
23976951	Loss of the nuclear receptor corepressor SLIRP compromises male fertility.	PLoS One	2013 Aug 15	Colley SM	doi: 10.1371/journal.pone.0070700
26866271	Affinity purification-mass spectrometry analysis of bcl-2 interactome identified SLIRP as a novel interacting protein.	Cell Death Dis	2016 Feb 11	Trisciuoglio D	doi: 10.1038/cddis.2015.357.
27353330	SLIRP stabilizes LRPPRC via an RRM-PPR protein interface.	Nucleic Acids Res	2016 Aug 19	Spahr H	doi: 10.1093/nar/gkw575
20200222	LRPPRC and SLIRP interact in a ribonucleoprotein complex that regulates posttranscriptional gene expression in mitochondria.	Mol Biol Cell	2010 Apr 15	Sasarman F	doi: 10.1091/mbc.E10-01-0047
25214534	Tissue-specific responses to the LRPPRC founder mutation in French Canadian Leigh Syndrome.	Hum Mol Genet	2015 Jan 15	Sasarman F	doi: 10.1093/hmg/ddu468
25008111	A human mitochondrial poly(A) polymerase mutation reveals the complexities of post-transcriptional mitochondrial gene expression.	Hum Mol Genet	2014 Dec 1	Wilson WC	doi: 10.1093/hmg/ddu352
28835257	Long noncoding RNAs coordinate functions between mitochondria and the nucleus.	Epigenetics Chromatin	2017 Aug 23	Dong Y	doi: 10.1186/s13072-017-0149-x.

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000556831	SLIRP-207	729	-	ENSP00000450770	96 (aa)	-	H0YJ40
ENST00000557623	SLIRP-211	865	-	ENSP00000452057	98 (aa)	-	G3V4X6
ENST00000613856	SLIRP-212	420	-	ENSP00000478794	92 (aa)	-	A0A087WUN7
ENST00000556310	SLIRP-205	626	-	ENSP00000452329	76 (aa)	-	H0YJW7
ENST00000553981	SLIRP-202	285	-	ENSP00000450587	56 (aa)	-	H0YJ07
ENST00000557342	SLIRP-209	408	-	ENSP00000450909	109 (aa)	-	Q9GZT3
ENST00000238688	SLIRP-201	394	-	ENSP00000238688	107 (aa)	-	Q9GZT3
ENST00000557431	SLIRP-210	725	-	ENSP00000450849	124 (aa)	-	G3V2S9
ENST00000556375	SLIRP-206	408	-	ENSP00000452162	72 (aa)	-	H0YJU7
ENST00000555890	SLIRP-204	471	-	ENSP00000451606	40 (aa)	-	H0YJI1
ENST00000556956	SLIRP-208	450	-	-	- (aa)	-	-
ENST00000554074	SLIRP-203	445	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000119705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000119705's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000119705	SLIRP	84	34.375	ENSG00000153944	MSI2	62	32.895
ENSG00000119705	SLIRP	86	33.846	ENSG00000138668	HNRNPD	77	34.091
ENSG00000119705	SLIRP	91	30.769	ENSG00000152795	HNRNPDL	54	30.769
ENSG00000119705	SLIRP	93	30.986	ENSG00000132819	RBM38	62	30.667
ENSG00000119705	SLIRP	93	33.846	ENSG00000197451	HNRNPAB	50	33.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000119705	SLIRP	92	57.143	ENSAPOG00000001298	slirp	88	48.864	Acanthochromis_polyacanthus
ENSG00000119705	SLIRP	97	80.899	ENSAMEG00000003975	SLIRP	85	81.818	Ailuropoda_melanoleuca
ENSG00000119705	SLIRP	92	58.571	ENSACIG00000023083	slirp	83	55.952	Amphilophus_citrinellus
ENSG00000119705	SLIRP	93	59.155	ENSAOCG00000006342	slirp	90	50.562	Amphiprion_ocellaris
ENSG00000119705	SLIRP	93	59.155	ENSAPEG00000015719	-	91	50.562	Amphiprion_percula
ENSG00000119705	SLIRP	93	59.155	ENSAPEG00000015917	slirp	90	50.562	Amphiprion_percula
ENSG00000119705	SLIRP	92	58.571	ENSATEG00000013525	slirp	77	55.844	Anabas_testudineus
ENSG00000119705	SLIRP	92	58.571	ENSAMXG00000018693	slirp	88	53.409	Astyanax_mexicanus
ENSG00000119705	SLIRP	100	83.673	ENSCJAG00000016946	SLIRP	89	82.727	Callithrix_jacchus
ENSG00000119705	SLIRP	95	80.556	ENSCAFG00020015876	-	86	71.875	Canis_lupus_dingo
ENSG00000119705	SLIRP	100	81.452	ENSCCAG00000030130	SLIRP	89	82.727	Cebus_capucinus
ENSG00000119705	SLIRP	100	85.870	ENSCATG00000036327	SLIRP	84	85.897	Cercocebus_atys
ENSG00000119705	SLIRP	99	84.000	ENSCSAG00000011736	SLIRP	87	81.053	Chlorocebus_sabaeus
ENSG00000119705	SLIRP	88	65.672	ENSCPBG00000026327	SLIRP	75	61.842	Chrysemys_picta_bellii
ENSG00000119705	SLIRP	97	82.432	ENSCANG00000032892	SLIRP	86	82.143	Colobus_angolensis_palliatus
ENSG00000119705	SLIRP	99	77.333	ENSCGRG00001024068	Slirp	86	67.708	Cricetulus_griseus_chok1gshd
ENSG00000119705	SLIRP	99	77.333	ENSCGRG00000017440	Slirp	86	67.708	Cricetulus_griseus_crigri
ENSG00000119705	SLIRP	96	51.136	ENSCSEG00000015766	slirp	87	48.837	Cynoglossus_semilaevis
ENSG00000119705	SLIRP	88	65.672	ENSCVAG00000012504	slirp	75	61.842	Cyprinodon_variegatus
ENSG00000119705	SLIRP	93	59.155	ENSDARG00000097753	slirp	72	59.459	Danio_rerio
ENSG00000119705	SLIRP	93	70.423	ENSDNOG00000007721	SLIRP	81	67.416	Dasypus_novemcinctus
ENSG00000119705	SLIRP	97	75.676	ENSDORG00000012379	Slirp	86	68.421	Dipodomys_ordii
ENSG00000119705	SLIRP	99	68.000	ENSETEG00000010345	SLIRP	87	66.316	Echinops_telfairi
ENSG00000119705	SLIRP	96	80.682	ENSEASG00005020193	SLIRP	86	73.684	Equus_asinus_asinus
ENSG00000119705	SLIRP	95	72.222	ENSEEUG00000007257	SLIRP	88	66.292	Erinaceus_europaeus
ENSG00000119705	SLIRP	92	55.714	ENSELUG00000016800	slirp	73	55.405	Esox_lucius
ENSG00000119705	SLIRP	100	80.263	ENSFCAG00000036326	SLIRP	84	80.723	Felis_catus
ENSG00000119705	SLIRP	88	55.224	ENSFALG00000012583	SLIRP	81	47.674	Ficedula_albicollis
ENSG00000119705	SLIRP	95	73.611	ENSFDAG00000008347	SLIRP	79	68.539	Fukomys_damarensis
ENSG00000119705	SLIRP	80	62.295	ENSFHEG00000004709	slirp	83	57.895	Fundulus_heteroclitus
ENSG00000119705	SLIRP	92	55.714	ENSGMOG00000016948	slirp	83	48.276	Gadus_morhua
ENSG00000119705	SLIRP	88	55.224	ENSGALG00000031238	SLIRP	73	56.522	Gallus_gallus
ENSG00000119705	SLIRP	93	63.380	ENSGAFG00000010998	slirp	84	59.524	Gambusia_affinis
ENSG00000119705	SLIRP	89	57.353	ENSGACG00000020137	slirp	81	58.571	Gasterosteus_aculeatus
ENSG00000119705	SLIRP	92	70.000	ENSGAGG00000009953	SLIRP	60	61.364	Gopherus_agassizii
ENSG00000119705	SLIRP	100	100.000	ENSGGOG00000011059	-	100	100.000	Gorilla_gorilla
ENSG00000119705	SLIRP	100	58.559	ENSHGLG00000018491	SLIRP	83	60.870	Heterocephalus_glaber_female
ENSG00000119705	SLIRP	100	58.559	ENSHGLG00100014153	SLIRP	83	60.870	Heterocephalus_glaber_male
ENSG00000119705	SLIRP	93	61.972	ENSHCOG00000006795	slirp	87	52.326	Hippocampus_comes
ENSG00000119705	SLIRP	92	55.714	ENSIPUG00000010214	SLIRP	85	51.765	Ictalurus_punctatus
ENSG00000119705	SLIRP	100	71.429	ENSSTOG00000034316	SLIRP	87	67.010	Ictidomys_tridecemlineatus
ENSG00000119705	SLIRP	93	49.296	ENSKMAG00000002038	slirp	73	47.368	Kryptolebias_marmoratus
ENSG00000119705	SLIRP	92	55.714	ENSLBEG00000007564	slirp	85	51.765	Labrus_bergylta
ENSG00000119705	SLIRP	93	61.972	ENSLACG00000013434	SLIRP	87	53.333	Latimeria_chalumnae
ENSG00000119705	SLIRP	100	86.957	ENSMFAG00000042960	SLIRP	84	85.897	Macaca_fascicularis
ENSG00000119705	SLIRP	100	86.957	ENSMMUG00000029256	SLIRP	84	85.897	Macaca_mulatta
ENSG00000119705	SLIRP	100	86.957	ENSMNEG00000028921	SLIRP	84	85.897	Macaca_nemestrina
ENSG00000119705	SLIRP	100	85.870	ENSMLEG00000043644	SLIRP	86	83.333	Mandrillus_leucophaeus
ENSG00000119705	SLIRP	92	60.000	ENSMZEG00005004617	slirp	86	57.647	Maylandia_zebra
ENSG00000119705	SLIRP	97	77.027	ENSMAUG00000003857	Slirp	85	68.085	Mesocricetus_auratus
ENSG00000119705	SLIRP	95	81.944	ENSMICG00000012080	SLIRP	88	73.636	Microcebus_murinus
ENSG00000119705	SLIRP	99	77.333	ENSMOCG00000016019	Slirp	83	69.892	Microtus_ochrogaster
ENSG00000119705	SLIRP	92	55.714	ENSMMOG00000018268	slirp	85	52.941	Mola_mola
ENSG00000119705	SLIRP	91	65.217	ENSMODG00000005207	-	100	64.789	Monodelphis_domestica
ENSG00000119705	SLIRP	93	57.746	ENSMALG00000012581	slirp	77	57.333	Monopterus_albus
ENSG00000119705	SLIRP	99	77.333	MGP_CAROLIEiJ_G0017995	Slirp	87	70.213	Mus_caroli
ENSG00000119705	SLIRP	99	78.667	ENSMUSG00000021040	Slirp	76	80.000	Mus_musculus
ENSG00000119705	SLIRP	99	78.667	MGP_SPRETEiJ_G0018840	Slirp	85	70.526	Mus_spretus
ENSG00000119705	SLIRP	95	73.611	ENSMLUG00000029544	-	87	64.948	Myotis_lucifugus
ENSG00000119705	SLIRP	99	69.333	ENSMLUG00000024998	-	87	63.918	Myotis_lucifugus
ENSG00000119705	SLIRP	96	78.082	ENSNGAG00000016363	Slirp	90	70.213	Nannospalax_galili
ENSG00000119705	SLIRP	99	85.333	ENSNLEG00000027238	-	91	85.263	Nomascus_leucogenys
ENSG00000119705	SLIRP	100	91.935	ENSNLEG00000032459	-	89	92.727	Nomascus_leucogenys
ENSG00000119705	SLIRP	100	78.947	ENSODEG00000012580	SLIRP	83	78.947	Octodon_degus
ENSG00000119705	SLIRP	92	60.000	ENSONIG00000011692	slirp	86	56.471	Oreochromis_niloticus
ENSG00000119705	SLIRP	96	72.603	ENSOANG00000022366	SLIRP	84	61.702	Ornithorhynchus_anatinus
ENSG00000119705	SLIRP	92	57.143	ENSORLG00000010761	slirp	64	55.422	Oryzias_latipes
ENSG00000119705	SLIRP	92	58.571	ENSORLG00020022188	slirp	82	57.317	Oryzias_latipes_hni
ENSG00000119705	SLIRP	92	57.143	ENSORLG00015020171	slirp	84	54.118	Oryzias_latipes_hsok
ENSG00000119705	SLIRP	92	58.571	ENSOMEG00000019321	slirp	83	56.627	Oryzias_melastigma
ENSG00000119705	SLIRP	100	100.000	ENSPPAG00000040710	-	100	100.000	Pan_paniscus
ENSG00000119705	SLIRP	99	81.443	ENSPPRG00000014350	SLIRP	84	81.928	Panthera_pardus
ENSG00000119705	SLIRP	99	81.443	ENSPTIG00000014196	SLIRP	84	81.928	Panthera_tigris_altaica
ENSG00000119705	SLIRP	100	100.000	ENSPTRG00000030691	SLIRP	100	100.000	Pan_troglodytes
ENSG00000119705	SLIRP	100	86.957	ENSPANG00000026323	SLIRP	84	87.179	Papio_anubis
ENSG00000119705	SLIRP	80	57.377	ENSPKIG00000008831	slirp	69	54.286	Paramormyrops_kingsleyae
ENSG00000119705	SLIRP	88	70.149	ENSPMGG00000010541	slirp	87	64.474	Periophthalmus_magnuspinnatus
ENSG00000119705	SLIRP	95	75.000	ENSPEMG00000013234	Slirp	80	67.033	Peromyscus_maniculatus_bairdii
ENSG00000119705	SLIRP	79	53.333	ENSPMAG00000009355	slirp	76	50.000	Petromyzon_marinus
ENSG00000119705	SLIRP	88	70.149	ENSPCIG00000026842	-	78	68.493	Phascolarctos_cinereus
ENSG00000119705	SLIRP	92	61.429	ENSPFOG00000006758	slirp	86	53.488	Poecilia_formosa
ENSG00000119705	SLIRP	92	61.429	ENSPLAG00000011140	slirp	85	56.471	Poecilia_latipinna
ENSG00000119705	SLIRP	92	61.429	ENSPMEG00000019535	slirp	86	53.488	Poecilia_mexicana
ENSG00000119705	SLIRP	92	61.429	ENSPREG00000011673	slirp	86	53.488	Poecilia_reticulata
ENSG00000119705	SLIRP	100	88.991	ENSPPYG00000006030	SLIRP	87	88.421	Pongo_abelii
ENSG00000119705	SLIRP	95	80.556	ENSPCOG00000015159	SLIRP	88	74.545	Propithecus_coquereli
ENSG00000119705	SLIRP	92	64.286	ENSPNAG00000008633	slirp	90	55.056	Pygocentrus_nattereri
ENSG00000119705	SLIRP	100	86.957	ENSRBIG00000032222	-	84	85.897	Rhinopithecus_bieti
ENSG00000119705	SLIRP	100	81.443	ENSRBIG00000032998	-	77	79.518	Rhinopithecus_bieti
ENSG00000119705	SLIRP	99	80.000	ENSRBIG00000031396	-	79	78.481	Rhinopithecus_bieti
ENSG00000119705	SLIRP	97	80.899	ENSRBIG00000035817	-	86	77.174	Rhinopithecus_bieti
ENSG00000119705	SLIRP	100	83.158	ENSRROG00000017133	-	84	82.716	Rhinopithecus_roxellana
ENSG00000119705	SLIRP	99	84.000	ENSRROG00000041312	-	77	84.615	Rhinopithecus_roxellana
ENSG00000119705	SLIRP	99	78.667	ENSRROG00000035604	-	79	77.215	Rhinopithecus_roxellana
ENSG00000119705	SLIRP	100	85.870	ENSRROG00000036656	-	84	85.897	Rhinopithecus_roxellana
ENSG00000119705	SLIRP	100	82.258	ENSSBOG00000020014	SLIRP	88	83.636	Saimiri_boliviensis_boliviensis
ENSG00000119705	SLIRP	93	63.380	ENSSFOG00015011165	slirp	88	54.023	Scleropages_formosus
ENSG00000119705	SLIRP	87	46.970	ENSSMAG00000012930	slirp	73	47.297	Scophthalmus_maximus
ENSG00000119705	SLIRP	92	61.429	ENSSDUG00000021883	slirp	55	54.762	Seriola_dumerili
ENSG00000119705	SLIRP	92	61.429	ENSSLDG00000023136	slirp	75	54.762	Seriola_lalandi_dorsalis
ENSG00000119705	SLIRP	93	63.380	ENSSPUG00000009346	SLIRP	76	62.162	Sphenodon_punctatus
ENSG00000119705	SLIRP	92	55.714	ENSSPAG00000013477	slirp	78	55.128	Stegastes_partitus
ENSG00000119705	SLIRP	93	80.282	ENSSSCG00000028167	SLIRP	87	68.367	Sus_scrofa
ENSG00000119705	SLIRP	92	54.286	ENSTGUG00000012337	SLIRP	81	48.837	Taeniopygia_guttata
ENSG00000119705	SLIRP	92	54.930	ENSTRUG00000020127	slirp	74	54.667	Takifugu_rubripes
ENSG00000119705	SLIRP	96	79.545	ENSUAMG00000022445	SLIRP	87	72.165	Ursus_americanus
ENSG00000119705	SLIRP	96	79.545	ENSUMAG00000007166	SLIRP	87	72.165	Ursus_maritimus
ENSG00000119705	SLIRP	97	74.324	ENSVPAG00000001781	SLIRP	87	70.526	Vicugna_pacos
ENSG00000119705	SLIRP	97	78.378	ENSVVUG00000004436	SLIRP	85	74.468	Vulpes_vulpes
ENSG00000119705	SLIRP	92	62.857	ENSXETG00000030343	SLIRP	80	63.380	Xenopus_tropicalis
ENSG00000119705	SLIRP	92	61.429	ENSXCOG00000009422	slirp	85	56.471	Xiphophorus_couchianus
ENSG00000119705	SLIRP	92	62.857	ENSXMAG00000015655	slirp	85	57.647	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000961	negative regulation of mitochondrial RNA catabolic process	21873635.	IBA	Process
GO:0001669	acrosomal vesicle	-	IEA	Component
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005515	protein binding	22045337.25416956.26496610.29507755.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005739	mitochondrion	20833797.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	IDA	Component
GO:0007286	spermatid development	-	IEA	Process
GO:0007338	single fertilization	-	IEA	Process
GO:0030317	flagellated sperm motility	-	IEA	Process
GO:0036126	sperm flagellum	-	IEA	Component
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0070584	mitochondrion morphogenesis	21873635.	IBA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Input Drug :

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.