EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr94844670Missense_MutationnovelE286K0.17
BLCAchr947930195'UTRnovel0.3
BRCAchr94826926Missense_MutationnovelR93C0.1RTC
BRCAchr94850331Intronrs5334306220.2
BRCAchr94841274SilentNAV209V0.69
CESCchr947930825'UTRnovel0.39
CHOLchr94841229Splice_Regionnovel0.31
COADchr94826997SilentNAV116V0.29
COADchr94849456Missense_Mutationrs781574564V293I0.29
COADchr94841261Missense_Mutationrs745330205A205V0.22
COADchr94860138Missense_Mutationrs142051884R329W0.44
COADchr948604233'UTRnovel0.28
COADchr94827002Missense_MutationnovelR118L0.29
COADchr94860210Missense_MutationNAG353W0.24
ESCAchr947929685'UTRnovel0.35
ESCAchr94793197Missense_MutationnovelR36W0.4RTC
GBMchr94834265Missense_MutationnovelA195V0.06
GBMchr94849551Splice_SitenovelX324_splice0.5
GBMchr948603223'UTRnovel0.35
GBMchr94826973SilentnovelF108F0.05
HNSCchr94826916SilentnovelC89C0.09
HNSCchr94844556Missense_MutationnovelE248K0.22
LUADchr94833225SilentNAL152L0.19
LUADchr94844632Missense_MutationNAE273A0.24
LUADchr94844522Splice_Regionnovel0.3
LUSCchr94823599Missense_Mutationrs115216700R63Q0.58RTC
LUSCchr94841242Missense_MutationnovelR199S0.2
LUSCchr94844532Missense_MutationNAG240C0.79
OVchr94860180Missense_MutationnovelT343S0.05
OVchr94833200Missense_MutationnovelG144V0.04
PRADchr94834198Missense_MutationNAV173M0.52
READchr94823599Missense_Mutationrs115216700R63Q0.22RTC
READchr94849482Silentrs767438290A301A0.27
READchr94844526Missense_MutationNAS238P0.36
SARCchr94849484Missense_MutationnovelL302P0.21
SARCchr94860199Missense_MutationnovelE349V0.3
SKCMchr94849544Missense_MutationnovelP322L0.36
SKCMchr948603093'UTRnovel0.27
SKCMchr94793151SilentnovelL20L0.38
SKCMchr94849543Missense_MutationnovelP322S0.4
SKCMchr94826983Missense_MutationNAP112S0.48
SKCMchr94850297Intronnovel0.82
SKCMchr94826886SilentNAL79L0.05
SKCMchr94841214Intronnovel0.26
SKCMchr94844531Silentrs749284895P239P0.22
SKCMchr94844532Missense_MutationnovelG240S0.22
SKCMchr94834165Missense_Mutationrs148074533G162R0.17
SKCMchr94823558Silentrs747429340A49A0.29
SKCMchr94826969Missense_MutationNAP107L0.17
STADchr94793106SilentNAA5A0.48
STADchr94841245Missense_Mutationrs371417592V200M0.35
STADchr94849482Silentrs767438290A301A0.25
STADchr94844593Missense_MutationNAA260V0.24
UCECchr94793123Missense_MutationnovelA11G0.33RTC
UCECchr94833153Splice_SitenovelX129_splice0.31
UCECchr94826985Silentrs377073783P112P0.34
UCECchr94850328IntronNA0.13
UCECchr94841235Nonsense_MutationnovelY196*0.17
UCECchr94826920Missense_Mutationrs150920079V91I0.45RTC
UCECchr94841288Missense_MutationnovelS214I0.19
UCECchr94850366Intronnovel0.09
UCECchr94860151Missense_MutationnovelS333N0.37
UCECchr94834150Missense_Mutationrs116589736R157W0.32
UCECchr94823588Silentrs768617640T59T0.36
UCECchr94826988Frame_Shift_DelnovelI115*0.45
UCECchr94841288Missense_MutationnovelS214N0.08
UCECchr94833175Missense_MutationnovelA136T0.48
UCECchr948603293'UTRrs1917884960.5
UCECchr94826938Missense_MutationnovelY97H0.06RTC
UCECchr94826993Missense_MutationNAI115T0.13
UCECchr94823599Missense_Mutationrs115216700R63Q0.43RTC
UCECchr94834227Silentrs374022520L182L0.44
UCECchr94834209Silentrs532877046V176V0.27
UCECchr947929715'UTRnovel0.48
UCECchr94834177Missense_MutationnovelE166K0.53
UCECchr94849482Silentrs767438290A301A0.36

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCAAMP0.15440.073854
LAMLDEL0.01050.24147
OVDEL0.43180.00059831
STADAMP0.10880.0062179
TGCTDEL0.38677.3329e-05
THCADEL0.03010.24038
THYMDEL0.03250.022012

Survival Analysis
CancerP-value Q-value
THYM0.0068

Kaplan-Meier Survival Analysis

KIRC0.00036

Kaplan-Meier Survival Analysis

SARC0.015

Kaplan-Meier Survival Analysis

UCS0.006

Kaplan-Meier Survival Analysis

BRCA0.018

Kaplan-Meier Survival Analysis

KIRP0.048

Kaplan-Meier Survival Analysis

PAAD0.048

Kaplan-Meier Survival Analysis

BLCA0.043

Kaplan-Meier Survival Analysis

CESC0.023

Kaplan-Meier Survival Analysis

UCEC0.048

Kaplan-Meier Survival Analysis

GBM0.0063

Kaplan-Meier Survival Analysis

LIHC0.00089

Kaplan-Meier Survival Analysis

LGG0.0001

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000120158 (Gene tree)
Gene ID
10171
Gene Symbol
RCL1
Alias
RPCL1|RNAC
Full Name
RNA terminal phosphate cyclase like 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
93,084 bases
Position
chr9:4,792,834-4,885,917
Accession
17687
RBP type
canonical RBP
Summary
(RNA Terminal Phosphate Cyclase Like 1) is a Protein Coding gene. Among its related pathways are rRNA processing in the nucleus and cytosol and Gene Expression. Gene Ontology (GO) annotations related to this gene include RNA binding and RNA-3'-phosphate cyclase activity. An important paralog of this gene is RTCA.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000371169RTCPF01137.211.4e-6011
ENSP00000371151RTCPF01137.212.2e-3311
ENSP00000412000RTCPF01137.217.6e-1211
ENSP00000371147RTCPF01137.217.2e-0711
ENSP00000371149RTCPF01137.217.2e-0711
ENSP00000388096RTCPF01137.217.2e-0711
ENSP00000412000RTC_insertPF05189.138e-3711
ENSP00000371169RTC_insertPF05189.132.4e-3611
ENSP00000413381RTC_insertPF05189.131.6e-2911
ENSP00000371147RTC_insertPF05189.133.7e-2911
ENSP00000371149RTC_insertPF05189.133.7e-2911
ENSP00000388096RTC_insertPF05189.133.7e-2911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
19332556A novel small-subunit processome assembly intermediate that contains the U3 snoRNP, nucleolin, RRP5, and DBP4.Mol Cell Biol2009 JunTurner AJdoi: 10.1128/MCB.00029-09
21367972Crystal structure of Rcl1, an essential component of the eukaryal pre-rRNA processosome implicated in 18s rRNA biogenesis.RNA2011 AprTanaka Ndoi: 10.1261/rna.2571811
16376378GTP-dependent formation of a ribonucleoprotein subcomplex required for ribosome biogenesis.J Mol Biol2006 Feb 17Karbstein K-
31217256Rrp5 Establishes a Checkpoint for 60S Assembly During 40S Maturation.RNA2019 Jun 19Khoshnevis Sdoi: 10.1261/rna.071225.119
16307926An essential GTPase promotes assembly of preribosomal RNA processing complexes.Mol Cell2005 Nov 23Karbstein K-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000441844RCL1-205497-ENSP00000413381137 (aa)-Q5VZU2
ENST00000381750RCL1-2042134XM_006716715ENSP00000371169373 (aa)XP_006716778Q9Y2P8
ENST00000442869RCL1-2061644-ENSP00000412000215 (aa)-Q5VZU3
ENST00000381728RCL1-201758XM_017014176ENSP00000371147187 (aa)XP_016869665Q9Y2P8
ENST00000473230RCL1-209441--- (aa)--
ENST00000381732RCL1-203804-ENSP00000371151175 (aa)-Q5VYW8
ENST00000381730RCL1-202801-ENSP00000371149187 (aa)-Q9Y2P8
ENST00000448872RCL1-2081459XM_011517673ENSP00000388096187 (aa)XP_011515975Q9Y2P8
ENST00000445485RCL1-2071878--- (aa)--
Gene Model
Click here to download ENSG00000120158's gene model file
Pathways
Pathway IDPathway NameSource
hsa03008Ribosome biogenesis in eukaryotesKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000120158Hemoglobin A, Glycosylated6.945E-0619875614
ENSG00000120158Heart Failure9.1760822E-004-
ENSG00000120158Platelet Function Tests1.7895200E-005-
ENSG00000120158Platelet Function Tests7.9723527E-006-
ENSG00000120158Erythrocyte Count1E-828017375
ENSG00000120158Platelet Count1E-2922139419
ENSG00000120158Erythrocyte Count1E-1923222517
ENSG00000120158Erythrocyte Count2E-723263863
ENSG00000120158Erythrocyte Indices1E-828017375
ENSG00000120158Erythrocyte Indices2E-928017375
ENSG00000120158Erythrocyte Count3E-1420139978
ENSG00000120158Platelet Count1E-924026423
ENSG00000120158Erythrocyte Indices6E-1120139978
ENSG00000120158Hemoglobins6E-1120139978
ENSG00000120158Erythrocyte Count1E-1128017375
ENSG00000120158Platelet Count1E-623263863
ENSG00000120158Erythrocyte Count3E-2019862010
ENSG00000120158Erythrocyte Indices2E-1419862010
ENSG00000120158Erythrocyte Count5E-2328017375
ENSG00000120158Erythrocyte Indices5E-623263863
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000120158rs785336594855858CHigh light scatter reticulocyte percentage of red cells27863252[0.028-0.046] unit decrease0.03710078EFO_0007986
ENSG00000120158rs1780378094849647CMean corpuscular hemoglobin27863252[0.081-0.098] unit decrease0.08967346EFO_0004527
ENSG00000120158rs787424494847570CRed blood cell count27863252[0.053-0.07] unit increase0.0619076EFO_0004305
ENSG00000120158rs1780378094849647CMean corpuscular volume27863252[0.088-0.105] unit decrease0.09619212EFO_0004526
ENSG00000120158rs223649694844265CMean corpuscular hemoglobin20139978[0.053-0.101] unit decrease0.077EFO_0004509|EFO_0004527
ENSG00000120158rs223649694844265CMean corpuscular volume20139978[0.066-0.114] unit decrease0.09EFO_0004526
ENSG00000120158rs1075865894856877?Red blood cell count28017375EFO_0004305
ENSG00000120158rs1075865894856877AMean corpuscular volume28017375[0.0028-0.0052] unit decrease0.004EFO_0004526
ENSG00000120158rs1075865894856877?Mean corpuscular volume28017375EFO_0004526
ENSG00000120158rs1075865694852599AMean corpuscular hemoglobin28017375[0.0026-0.0054] unit increase0.004EFO_0004527
ENSG00000120158rs1075865894856877?Mean corpuscular hemoglobin28017375EFO_0004527
ENSG00000120158rs223649694844265CRed blood cell traits23222517[0.22-0.34] unit decrease0.279EFO_0004526
ENSG00000120158rs45728794834394APlatelet count23263863[3.55-8.42] unit decrease5.987EFO_0004309
ENSG00000120158rs223649694844265TMean corpuscular volume23263863[0.26-0.57] unit increase0.4162EFO_0004526
ENSG00000120158rs1081509494845520AMean corpuscular hemoglobin23263863[0.083-0.209] unit increase0.1461EFO_0004527
ENSG00000120158rs1330066394814948CPlatelet count22139419[4.64-6.53] 10^9/l increase5.585EFO_0004309
ENSG00000120158rs1075865894856877AMean corpuscular volume19862010[0.003-0.005] fl decrease0EFO_0004526
ENSG00000120158rs1075865894856877AMean corpuscular hemoglobin19862010[0.004-0.006] pg decrease0EFO_0004527
ENSG00000120158rs1075865894856877?Red blood cell count29403010[0.028-0.045] unit increase novel0.03646EFO_0004305
ENSG00000120158rs1075865694852599?Mean corpuscular volume29403010[0.07-0.087] unit decrease novel0.07883EFO_0004526
ENSG00000120158rs382443094847168?Mean corpuscular hemoglobin29403010[0.062-0.079] unit decrease novel0.07049EFO_0004527
ENSG00000120158rs1235157094806633?Platelet count29403010[0.069-0.099] unit decrease novel0.08416EFO_0004309
ENSG00000120158rs1075865694852599GImmature fraction of reticulocytes27863252[0.056-0.073] unit decrease0.06415109EFO_0007986
ENSG00000120158rs1097480894840380GPlatelet count27863252[0.11-0.13] unit increase0.1217556EFO_0004309
ENSG00000120158rs188743094856234APlatelet count27863252[0.063-0.078] unit increase0.07034669EFO_0004309
ENSG00000120158rs1081509594848297GRed cell distribution width27863252[0.032-0.049] unit increase0.04005609EFO_0005192
ENSG00000120158rs785336594855858CHigh light scatter reticulocyte count27863252[0.019-0.036] unit decrease0.02752521EFO_0007986
ENSG00000120158rs1097480894840380GPlateletcrit27863252[0.13-0.15] unit increase0.1356046EFO_0007985
ENSG00000120158rs188743094856234APlateletcrit27863252[0.071-0.086] unit increase0.07844472EFO_0007985
ENSG00000120158rs29684794793798TEosinophil counts27863252[0.015-0.03] unit increase0.02221495EFO_0004842
ENSG00000120158rs1073906994863305ARed cell distribution width28957414[0.031-0.05] unit increase0.0407602EFO_0005192
ENSG00000120158rs1075865694852599?Red cell distribution width30595370EFO_0005192
ENSG00000120158rs1075865694852599?Mean corpuscular hemoglobin30595370EFO_0004527
ENSG00000120158rs1075865694852599?Red blood cell count30595370EFO_0004305
ENSG00000120158rs46018294850613?Eosinophil counts30595370EFO_0004842
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000120158's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000120158RCL19687.023ENSAPOG00000015666rcl110078.877Acanthochromis_polyacanthus
ENSG00000120158RCL110097.674ENSAMEG00000002631RCL110097.587Ailuropoda_melanoleuca
ENSG00000120158RCL19687.786ENSACIG00000021195rcl19979.459Amphilophus_citrinellus
ENSG00000120158RCL19685.496ENSAOCG00000002223rcl110078.342Amphiprion_ocellaris
ENSG00000120158RCL19685.496ENSAPEG00000006905rcl110078.610Amphiprion_percula
ENSG00000120158RCL110078.704ENSATEG00000020026rcl19976.757Anabas_testudineus
ENSG00000120158RCL110086.047ENSAPLG00000006031RCL110087.195Anas_platyrhynchos
ENSG00000120158RCL110085.581ENSACAG00000003640RCL110085.255Anolis_carolinensis
ENSG00000120158RCL110099.535ENSANAG00000037372RCL110098.928Aotus_nancymaae
ENSG00000120158RCL110082.870ENSACLG00000021724rcl19978.919Astatotilapia_calliptera
ENSG00000120158RCL19684.733ENSAMXG00000033394rcl19978.533Astyanax_mexicanus
ENSG00000120158RCL19947.340WBGene00022852ZK1127.59947.340Caenorhabditis_elegans
ENSG00000120158RCL110099.732ENSCJAG00000011202RCL110099.732Callithrix_jacchus
ENSG00000120158RCL110097.209ENSCAFG00000002091RCL110096.515Canis_familiaris
ENSG00000120158RCL110097.209ENSCAFG00020000638RCL17896.515Canis_lupus_dingo
ENSG00000120158RCL110096.515ENSCHIG00000012407RCL110096.515Capra_hircus
ENSG00000120158RCL110099.070ENSTSYG00000009592RCL110097.326Carlito_syrichta
ENSG00000120158RCL16880.925ENSCAPG00000013575RCL110080.925Cavia_aperea
ENSG00000120158RCL110097.674ENSCPOG00000015354RCL110097.319Cavia_porcellus
ENSG00000120158RCL110099.732ENSCCAG00000033505RCL110099.732Cebus_capucinus
ENSG00000120158RCL110099.465ENSCATG00000034721RCL110099.465Cercocebus_atys
ENSG00000120158RCL110097.587ENSCLAG00000007445RCL110097.587Chinchilla_lanigera
ENSG00000120158RCL110099.535ENSCSAG00000008811RCL110099.464Chlorocebus_sabaeus
ENSG00000120158RCL19695.420ENSCHOG00000007216RCL110082.043Choloepus_hoffmanni
ENSG00000120158RCL110089.302ENSCPBG00000025481RCL19489.362Chrysemys_picta_bellii
ENSG00000120158RCL19958.525ENSCING00000019565-9858.919Ciona_intestinalis
ENSG00000120158RCL19630.374ENSCING00000007875-5530.374Ciona_intestinalis
ENSG00000120158RCL19630.806ENSCSAVG00000007269-5530.806Ciona_savignyi
ENSG00000120158RCL1100100.000ENSCANG00000027099RCL110099.732Colobus_angolensis_palliatus
ENSG00000120158RCL110096.247ENSCGRG00001013748Rcl110096.247Cricetulus_griseus_chok1gshd
ENSG00000120158RCL19795.673ENSCGRG00000005843Rcl19996.037Cricetulus_griseus_crigri
ENSG00000120158RCL110081.944ENSCSEG00000000712rcl19779.459Cynoglossus_semilaevis
ENSG00000120158RCL110082.407ENSCVAG00000011536rcl19980.541Cyprinodon_variegatus
ENSG00000120158RCL19686.260ENSDARG00000038312rcl110076.567Danio_rerio
ENSG00000120158RCL110096.744ENSDNOG00000019911RCL110096.981Dasypus_novemcinctus
ENSG00000120158RCL110097.209ENSDORG00000015645Rcl110096.783Dipodomys_ordii
ENSG00000120158RCL19953.968FBgn0020909Rtc19853.968Drosophila_melanogaster
ENSG00000120158RCL172100.000ENSETEG00000014087-82100.000Echinops_telfairi
ENSG00000120158RCL110053.600ENSEBUG00000016621-10053.600Eptatretus_burgeri
ENSG00000120158RCL110097.855ENSEASG00005010653RCL110097.855Equus_asinus_asinus
ENSG00000120158RCL110097.855ENSECAG00000015973RCL110097.855Equus_caballus
ENSG00000120158RCL19695.420ENSEEUG00000009801RCL110082.038Erinaceus_europaeus
ENSG00000120158RCL110077.778ENSELUG00000007353rcl110075.936Esox_lucius
ENSG00000120158RCL110095.710ENSFCAG00000014557RCL110095.710Felis_catus
ENSG00000120158RCL110085.581ENSFALG00000010553RCL19482.817Ficedula_albicollis
ENSG00000120158RCL110096.744ENSFDAG00000004209RCL110096.636Fukomys_damarensis
ENSG00000120158RCL110082.407ENSFHEG00000011228rcl19980.000Fundulus_heteroclitus
ENSG00000120158RCL19684.733ENSGMOG00000004677rcl19977.838Gadus_morhua
ENSG00000120158RCL19986.179ENSGALG00000015024RCL19986.179Gallus_gallus
ENSG00000120158RCL110080.556ENSGAFG00000007257rcl19978.378Gambusia_affinis
ENSG00000120158RCL110080.093ENSGACG00000017474rcl110077.540Gasterosteus_aculeatus
ENSG00000120158RCL110090.233ENSGAGG00000003689RCL110089.812Gopherus_agassizii
ENSG00000120158RCL110099.535ENSGGOG00000015041RCL110099.465Gorilla_gorilla
ENSG00000120158RCL110083.333ENSHBUG00000001393rcl19979.189Haplochromis_burtoni
ENSG00000120158RCL19787.293ENSHGLG00000005368-10080.965Heterocephalus_glaber_female
ENSG00000120158RCL110097.674ENSHGLG00000016452RCL110097.587Heterocephalus_glaber_female
ENSG00000120158RCL19886.567ENSHGLG00100018010-10082.038Heterocephalus_glaber_male
ENSG00000120158RCL110097.674ENSHGLG00100008718-10090.617Heterocephalus_glaber_male
ENSG00000120158RCL110081.019ENSHCOG00000020170rcl19978.378Hippocampus_comes
ENSG00000120158RCL110081.019ENSIPUG00000018054RCL19979.891Ictalurus_punctatus
ENSG00000120158RCL110097.587ENSSTOG00000000023RCL110097.587Ictidomys_tridecemlineatus
ENSG00000120158RCL19372.637ENSJJAG00000000764-9872.637Jaculus_jaculus
ENSG00000120158RCL110096.279ENSJJAG00000022803-10095.710Jaculus_jaculus
ENSG00000120158RCL110084.718ENSJJAG00000015632-10084.718Jaculus_jaculus
ENSG00000120158RCL110079.630ENSKMAG00000011946rcl19978.202Kryptolebias_marmoratus
ENSG00000120158RCL110083.333ENSLBEG00000003957rcl19976.216Labrus_bergylta
ENSG00000120158RCL19685.496ENSLACG00000004594RCL19885.489Latimeria_chalumnae
ENSG00000120158RCL110084.651ENSLOCG00000010148rcl19881.769Lepisosteus_oculatus
ENSG00000120158RCL110093.834ENSLAFG00000017495RCL110093.834Loxodonta_africana
ENSG00000120158RCL110099.535ENSMFAG00000037906RCL110099.464Macaca_fascicularis
ENSG00000120158RCL110093.714ENSMMUG00000041751-10093.714Macaca_mulatta
ENSG00000120158RCL110099.535ENSMNEG00000012288RCL110099.465Macaca_nemestrina
ENSG00000120158RCL110099.535ENSMLEG00000043088RCL110099.464Mandrillus_leucophaeus
ENSG00000120158RCL17230.247ENSMLEG00000042151RTCA5130.247Mandrillus_leucophaeus
ENSG00000120158RCL19685.496ENSMAMG00000008311rcl19979.189Mastacembelus_armatus
ENSG00000120158RCL110082.870ENSMZEG00005017292rcl19978.919Maylandia_zebra
ENSG00000120158RCL110084.018ENSMGAG00000002245RCL110084.018Meleagris_gallopavo
ENSG00000120158RCL110096.279ENSMAUG00000008922Rcl110096.279Mesocricetus_auratus
ENSG00000120158RCL110097.209ENSMICG00000015562RCL110097.051Microcebus_murinus
ENSG00000120158RCL110097.319ENSMOCG00000012145Rcl110097.319Microtus_ochrogaster
ENSG00000120158RCL19681.679ENSMMOG00000021264rcl19976.011Mola_mola
ENSG00000120158RCL19693.130ENSMODG00000015377RCL19493.803Monodelphis_domestica
ENSG00000120158RCL110080.093ENSMALG00000018618rcl19977.838Monopterus_albus
ENSG00000120158RCL110097.051MGP_CAROLIEiJ_G0022853Rcl110097.051Mus_caroli
ENSG00000120158RCL110097.051ENSMUSG00000024785Rcl110097.051Mus_musculus
ENSG00000120158RCL110096.744MGP_PahariEiJ_G0014346Rcl110097.059Mus_pahari
ENSG00000120158RCL110096.247MGP_SPRETEiJ_G0023771Rcl110096.471Mus_spretus
ENSG00000120158RCL110096.515ENSMPUG00000004998RCL110096.515Mustela_putorius_furo
ENSG00000120158RCL110097.051ENSMLUG00000009654RCL110097.051Myotis_lucifugus
ENSG00000120158RCL110097.674ENSNGAG00000015327Rcl110097.587Nannospalax_galili
ENSG00000120158RCL19730.415ENSNGAG00000011540Rtca5930.415Nannospalax_galili
ENSG00000120158RCL110082.870ENSNBRG00000019854rcl19674.581Neolamprologus_brichardi
ENSG00000120158RCL110096.783ENSNLEG00000008891RCL110096.783Nomascus_leucogenys
ENSG00000120158RCL19794.231ENSMEUG00000007653RCL110087.131Notamacropus_eugenii
ENSG00000120158RCL110096.783ENSOPRG00000010965RCL110096.783Ochotona_princeps
ENSG00000120158RCL19896.739ENSODEG00000004151RCL19681.098Octodon_degus
ENSG00000120158RCL110082.870ENSONIG00000003871rcl19978.919Oreochromis_niloticus
ENSG00000120158RCL19788.152ENSOANG00000013193-10087.747Ornithorhynchus_anatinus
ENSG00000120158RCL17583.333ENSOANG00000013194-10083.333Ornithorhynchus_anatinus
ENSG00000120158RCL110098.605ENSOCUG00000008161RCL110098.391Oryctolagus_cuniculus
ENSG00000120158RCL19683.206ENSORLG00000010443rcl110076.471Oryzias_latipes
ENSG00000120158RCL19683.206ENSORLG00020012211rcl110076.471Oryzias_latipes_hni
ENSG00000120158RCL110078.704ENSORLG00015001122rcl110076.203Oryzias_latipes_hsok
ENSG00000120158RCL110081.019ENSOMEG00000022976rcl18878.075Oryzias_melastigma
ENSG00000120158RCL110096.279ENSOGAG00000007480RCL110095.979Otolemur_garnettii
ENSG00000120158RCL110096.783ENSOARG00000013463RCL110096.783Ovis_aries
ENSG00000120158RCL19630.189ENSPPAG00000035119RTCA6530.189Pan_paniscus
ENSG00000120158RCL1100100.000ENSPPAG00000037958RCL110099.732Pan_paniscus
ENSG00000120158RCL110094.906ENSPPRG00000022645RCL110094.906Panthera_pardus
ENSG00000120158RCL110094.884ENSPTIG00000019031RCL110094.884Panthera_tigris_altaica
ENSG00000120158RCL1100100.000ENSPTRG00000020743RCL1100100.000Pan_troglodytes
ENSG00000120158RCL110099.535ENSPANG00000025151RCL110099.464Papio_anubis
ENSG00000120158RCL19687.786ENSPKIG00000021022rcl110078.075Paramormyrops_kingsleyae
ENSG00000120158RCL110089.302ENSPSIG00000012302RCL110089.634Pelodiscus_sinensis
ENSG00000120158RCL110079.630ENSPMGG00000024007rcl110076.738Periophthalmus_magnuspinnatus
ENSG00000120158RCL110097.319ENSPEMG00000023275Rcl110097.319Peromyscus_maniculatus_bairdii
ENSG00000120158RCL19730.959ENSPMAG00000009110rtca9630.959Petromyzon_marinus
ENSG00000120158RCL19372.656ENSPMAG00000005419-9569.663Petromyzon_marinus
ENSG00000120158RCL110094.102ENSPCIG00000000188RCL110094.102Phascolarctos_cinereus
ENSG00000120158RCL110081.481ENSPFOG00000019682rcl19979.189Poecilia_formosa
ENSG00000120158RCL110081.481ENSPLAG00000022354rcl19979.189Poecilia_latipinna
ENSG00000120158RCL110081.481ENSPMEG00000008131rcl19979.189Poecilia_mexicana
ENSG00000120158RCL110081.019ENSPREG00000008032rcl19978.919Poecilia_reticulata
ENSG00000120158RCL110099.732ENSPPYG00000019244RCL110099.732Pongo_abelii
ENSG00000120158RCL110086.059ENSPCAG00000001440RCL110086.059Procavia_capensis
ENSG00000120158RCL110099.070ENSPCOG00000009611RCL110098.396Propithecus_coquereli
ENSG00000120158RCL110097.319ENSPVAG00000015752RCL110097.319Pteropus_vampyrus
ENSG00000120158RCL110082.870ENSPNYG00000012910rcl19978.919Pundamilia_nyererei
ENSG00000120158RCL19686.260ENSPNAG00000028307rcl19278.552Pygocentrus_nattereri
ENSG00000120158RCL110096.783ENSRNOG00000015491Rcl110096.783Rattus_norvegicus
ENSG00000120158RCL110099.535ENSRBIG00000035818RCL110099.464Rhinopithecus_bieti
ENSG00000120158RCL110099.535ENSRROG00000029781RCL110099.465Rhinopithecus_roxellana
ENSG00000120158RCL19836.486YOL010W-9735.310Saccharomyces_cerevisiae
ENSG00000120158RCL110099.196ENSSBOG00000026369RCL110099.196Saimiri_boliviensis_boliviensis
ENSG00000120158RCL19693.333ENSSHAG00000014086RCL110092.727Sarcophilus_harrisii
ENSG00000120158RCL19687.023ENSSFOG00015023020rcl110078.342Scleropages_formosus
ENSG00000120158RCL110080.556ENSSMAG00000019751rcl18579.189Scophthalmus_maximus
ENSG00000120158RCL110080.556ENSSDUG00000006349rcl110078.075Seriola_dumerili
ENSG00000120158RCL110081.481ENSSLDG00000022076rcl110078.342Seriola_lalandi_dorsalis
ENSG00000120158RCL19630.660ENSSARG00000013993RTCA6430.660Sorex_araneus
ENSG00000120158RCL110096.744ENSSARG00000009260RCL110096.247Sorex_araneus
ENSG00000120158RCL110090.233ENSSPUG00000016330RCL110088.204Sphenodon_punctatus
ENSG00000120158RCL110082.407ENSSPAG00000018038rcl110080.214Stegastes_partitus
ENSG00000120158RCL110099.070ENSSSCG00000005217RCL18398.123Sus_scrofa
ENSG00000120158RCL110085.067ENSTGUG00000005138RCL110085.067Taeniopygia_guttata
ENSG00000120158RCL110081.019ENSTRUG00000010493rcl19978.649Takifugu_rubripes
ENSG00000120158RCL110079.630ENSTNIG00000013214rcl19977.507Tetraodon_nigroviridis
ENSG00000120158RCL110097.209ENSTBEG00000016339RCL110090.885Tupaia_belangeri
ENSG00000120158RCL110096.783ENSTTRG00000016525RCL110096.783Tursiops_truncatus
ENSG00000120158RCL110097.674ENSUAMG00000005598RCL110097.587Ursus_americanus
ENSG00000120158RCL110096.744ENSUMAG00000017890RCL19796.636Ursus_maritimus
ENSG00000120158RCL110098.605ENSVPAG00000009188RCL110098.165Vicugna_pacos
ENSG00000120158RCL110097.209ENSVVUG00000007304RCL18996.646Vulpes_vulpes
ENSG00000120158RCL110075.401ENSXETG00000000592rcl110075.401Xenopus_tropicalis
ENSG00000120158RCL110081.481ENSXCOG00000004922rcl19979.189Xiphophorus_couchianus
ENSG00000120158RCL15930.455ENSXCOG00000008002rtca6330.455Xiphophorus_couchianus
ENSG00000120158RCL110081.481ENSXMAG00000022366RCL19979.189Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000447endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)-IEAProcess
GO:0000480endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)-IEAProcess
GO:0004521endoribonuclease activity21873635.IBAFunction
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0006364rRNA processing-TASProcess
GO:0008150biological_process-NDProcess
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