EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr12101329395SilentnovelQ1121Q0.35
BLCAchr12101383188Missense_MutationnovelD2602N0.16
BLCAchr12101338938Missense_MutationnovelE1332Q0.2DRIM
BLCAchr12101357075Missense_MutationnovelG1895A0.12
BLCAchr12101383125Missense_MutationNAD2581H0.42
BLCAchr12101366589Missense_MutationnovelL2053V0.25
BLCAchr12101292042Missense_MutationnovelA371S0.22
BLCAchr12101352171Missense_MutationNAQ1667H0.23
BLCAchr12101366571Missense_MutationNAP2047S0.55
BLCAchr12101317482Missense_MutationNAE853Q0.24
BLCAchr12101291754Missense_Mutationrs772729936D302N0.3
BLCAchr12101308313Missense_MutationNAQ708H0.23
BLCAchr12101373714Missense_Mutationrs769744992E2360K0.14
BLCAchr12101305996SilentnovelP621P0.1
BLCAchr12101379373Missense_MutationnovelH2467Y0.15
BLCAchr12101293186Missense_MutationNAE398K0.23
BLCAchr12101338921Missense_MutationNAR1326T0.19DRIM
BLCAchr12101289015Missense_MutationNAE191Q0.22
BLCAchr12101373599Missense_MutationNAE2321D0.42
BLCAchr12101290784Missense_MutationNAQ263E0.22
BLCAchr12101285820Missense_MutationNAV89F0.25
BLCAchr12101293174Missense_MutationnovelE394Q0.65
BLCAchr12101293240Missense_MutationNAE416K0.24
BLCAchr12101383612Frame_Shift_DelnovelP2668Lfs*170.3
BLCAchr12101385645Missense_MutationnovelE2707Q0.38
BLCAchr12101327078Splice_Regionnovel0.18
BLCAchr12101367880Missense_MutationnovelK2096N0.11
BLCAchr12101333433Frame_Shift_DelnovelV1184Ffs*200.19DRIM
BRCAchr12101300003SilentNAL539L0.59
BRCAchr12101286470Missense_MutationNAL159P0.33
BRCAchr12101363690Missense_MutationNAG1969R0.28
BRCAchr12101346480Frame_Shift_DelnovelL1593Kfs*180.14
BRCAchr12101329307Missense_MutationNAG1092V0.12DRIM
BRCAchr12101329424Missense_MutationNAS1131L0.37DRIM
BRCAchr12101383140Missense_Mutationrs200357157E2586K0.24
BRCAchr12101342587Missense_MutationnovelE1415K0.05DRIM
BRCAchr12101306044Silentrs758027281N637N0.13
BRCAchr12101356987Missense_Mutationrs778767258R1866C0.43
BRCAchr12101383643Missense_MutationnovelE2677G0.12
BRCAchr12101354918Missense_MutationNAS1732G0.45
BRCAchr12101311787Missense_MutationNAA767D0.35
BRCAchr12101327134Missense_MutationnovelS1032C0.1DRIM
BRCAchr12101354883Missense_MutationNAR1720P0.25
BRCAchr12101365603Missense_MutationnovelP2035T0.09
BRCAchr12101280311Missense_MutationnovelT10N0.07
BRCAchr12101305952Missense_MutationNAD607N0.42
BRCAchr12101344606Missense_MutationnovelM1487I0.14DRIM
CESCchr12101290143Missense_MutationnovelD202H0.2
CESCchr12101281141Missense_MutationNAG24E0.27
CESCchr12101290145Frame_Shift_InsnovelN204Kfs*100.14
CESCchr12101291023Intronnovel0.75
CESCchr12101329435Missense_MutationnovelD1135H0.62DRIM
CESCchr12101312218Missense_MutationnovelP832T0.41
CESCchr12101386099Silentrs149045326L2778L0.24
CESCchr12101375715Missense_MutationNAI2452S0.18
CESCchr12101369793Frame_Shift_DelnovelE2153Sfs*30.06
CESCchr12101375735Missense_MutationNAE2459K0.33
CESCchr12101354879Missense_MutationNAE1719K0.13
CESCchr12101290816SilentNAL273L0.38
CESCchr12101299818Missense_Mutationrs139131985V523M0.46
CESCchr12101308203Missense_Mutationrs77466434R672W0.39
CESCchr12101374876Missense_MutationnovelE2400D0.15
CESCchr121013862023'UTRnovel0.23
CESCchr12101365529Missense_MutationNAG2010A0.41
CESCchr12101366580Missense_MutationNAD2050N0.26
CESCchr12101317605Missense_MutationNAE894Q0.28
CESCchr12101344606Missense_MutationnovelM1487I0.35DRIM
CHOLchr12101312057Missense_MutationnovelM778T0.61
COADchr12101372954Missense_MutationNAA2290V0.12
COADchr12101286398Missense_Mutationrs147399996S135L0.39
COADchr12101305983Missense_MutationNAG617D0.37
COADchr12101329372Missense_Mutationrs750578552A1114T0.36DRIM
COADchr12101290225Missense_MutationnovelF229C0.21
COADchr12101312037Splice_RegionnovelE771E0.21
COADchr12101295572SilentnovelK448K0.25
COADchr12101383049Missense_MutationnovelK2555N0.06
COADchr12101373426Missense_MutationnovelS2302T0.44
COADchr12101383062Missense_Mutationrs770137347A2560T0.27
COADchr12101281155Missense_MutationnovelD29N0.06
COADchr12101366605Missense_MutationnovelC2058F0.37
COADchr12101338159SilentNAS1250S0.23
COADchr12101286412Nonsense_MutationnovelQ140*0.29
COADchr12101343012SilentnovelI1456I0.28
COADchr12101363690Missense_Mutationrs759472914G1969S0.28
COADchr12101371149Missense_MutationnovelA2260V0.5
COADchr12101379419Missense_MutationnovelT2482I0.04
COADchr12101295530SilentNAD434D0.28
COADchr12101379487Missense_MutationnovelT2505A0.05
COADchr12101356987Missense_Mutationrs778767258R1866C0.09
COADchr12101367969Missense_MutationNAD2126G0.34
COADchr12101285799Missense_MutationnovelV82M0.09
COADchr12101312056Missense_MutationnovelM778L0.05
COADchr12101354868Missense_MutationnovelA1715V0.1
COADchr12101312043SilentnovelE773E0.05
COADchr12101383569SilentnovelG2652G0.22
COADchr12101338131Missense_Mutationrs140749743A1241V0.26DRIM
COADchr12101285588Missense_MutationNAF49V0.09
COADchr12101309772Missense_MutationNAR722C0.13
COADchr12101356617Nonsense_Mutationrs747880391R1820*0.09
COADchr12101281126Missense_Mutationrs777483339F19C0.17
COADchr12101288984Frame_Shift_InsNAL183Tfs*90.29
COADchr12101329309Missense_Mutationrs552660501R1093C0.25DRIM
COADchr12101342983Missense_Mutationrs199880162D1447N0.31DRIM
COADchr12101317616SilentNAP897P0.22
COADchr12101317562Silentrs138126922I879I0.34
COADchr12101352151Missense_MutationNAH1661N0.11
COADchr12101370549Missense_MutationnovelF2225V0.3
COADchr12101344717Missense_MutationNAE1524D0.19DRIM
COADchr12101361978Missense_MutationNAF1903C0.06
COADchr12101375657Missense_Mutationrs771120382R2433C0.21
COADchr12101383266Missense_Mutationrs752995039R2628W0.29
COADchr12101365517Missense_Mutationrs756791850R2006Q0.37
COADchr12101373692SilentnovelS2352S0.12
COADchr12101356982Frame_Shift_InsnovelA1865Sfs*120.08
COADchr12101373416Silentrs201584446T2298T0.3
ESCAchr12101281135Missense_Mutationrs151017457R22Q0.27
ESCAchr12101338910Missense_MutationnovelK1322N0.2DRIM
ESCAchr12101334443Missense_MutationNAE1194Q0.13DRIM
ESCAchr12101357001Silentrs145450532A1870A0.15
ESCAchr12101383590SilentnovelG2659G0.62
ESCAchr12101381157Silentrs372963217L2534L0.41
ESCAchr12101286379Frame_Shift_Delrs761528888L131*0.32
ESCAchr12101312274Missense_MutationnovelI850M0.06
GBMchr12101386045Missense_MutationnovelK2760N0.1
GBMchr12101317577Silentrs758804530A884A0.41
GBMchr12101386077Missense_MutationnovelK2771M0.08
GBMchr12101345602Missense_MutationnovelF1552V0.16
GBMchr12101371142Missense_Mutationrs372457025E2258K0.2
GBMchr12101383640Missense_Mutationrs750799541R2676Q0.25
GBMchr12101356646SilentnovelK1829K0.38
GBMchr12101290767Missense_MutationnovelV257D0.14
GBMchr12101290974Intronnovel0.24
GBMchr12101327167Missense_Mutationrs774700772R1043Q0.43DRIM
GBMchr12101342952Silentrs751110666F1436F0.12
GBMchr12101353066Nonsense_MutationnovelE1682*0.13
GBMchr12101386007Nonsense_MutationnovelK2748*0.42
GBMchr12101369850Missense_MutationnovelA2172S0.1
HNSCchr12101285608Missense_MutationnovelW55C0.35
HNSCchr12101291823Missense_MutationnovelT325A0.26
HNSCchr12101286434Nonsense_MutationnovelW147*0.3
HNSCchr12101356984Missense_MutationnovelA1865S0.15
HNSCchr12101363628Missense_MutationnovelQ1948R0.23
HNSCchr12101383215Missense_MutationnovelE2611K0.14
HNSCchr12101363672Missense_MutationnovelD1963Y0.18
HNSCchr12101356996Missense_MutationnovelL1869V0.37
HNSCchr12101355038Missense_Mutationrs751752396I1772V0.15
HNSCchr12101372956Missense_MutationnovelQ2291E0.36
HNSCchr12101290964Intronnovel0.16
HNSCchr12101346517Missense_MutationnovelS1605T0.21
HNSCchr12101285576Missense_MutationnovelE45K0.27
HNSCchr12101373716Missense_MutationnovelE2360D0.33
HNSCchr12101290956Intronnovel0.14
HNSCchr12101338937SilentNAK1331K0.32
HNSCchr12101373658Missense_MutationnovelT2341K0.32
KIRCchr12101346566Frame_Shift_InsnovelF1622Lfs*170.09
KIRPchr12101327134Missense_MutationNAS1032Y0.15DRIM
KIRPchr12101290823Missense_MutationNAM276V0.28
KIRPchr12101373582Splice_Regionnovel0.6
LAMLchr12101291869Missense_Mutationrs373233138T340M0.13
LAMLchr12101370509SilentnovelA2211A0.1
LAMLchr12101286339SilentnovelA115A0.03
LAMLchr12101299836Nonsense_MutationnovelR529*0.05
LAMLchr12101338891Missense_MutationnovelS1316N0.07DRIM
LGGchr12101327177Silentrs201637301A1046A0.34
LGGchr12101356686Missense_MutationNAL1843V0.11
LGGchr12101308228Missense_Mutationrs749696639R680H0.46
LGGchr12101327166Missense_Mutationrs771140706R1043W0.42DRIM
LGGchr12101363687Missense_MutationnovelL1968I0.13
LGGchr12101375701Missense_MutationnovelK2447N0.36
LGGchr12101385702In_Frame_InsnovelL2726delinsHLNI0.13
LIHCchr12101383241Silentrs538781494L2619L0.08
LIHCchr12101300033Missense_MutationNAM549I0.91
LIHCchr121012801465'UTRnovel0.3
LIHCchr12101290919Intronnovel0.45
LIHCchr12101355030Missense_MutationnovelK1769R0.05
LIHCchr12101357052Missense_MutationNAE1887D0.14
LIHCchr12101317480Missense_MutationnovelN852S0.27
LIHCchr12101386049Missense_MutationNAE2762Q0.35
LIHCchr12101285792SilentNAN79N0.36
LIHCchr12101370495Missense_MutationnovelL2207V0.11
LIHCchr12101352066SilentnovelI1632I0.35
LIHCchr12101342474Frame_Shift_InsnovelQ1378Hfs*50.48DRIM
LUADchr12101295575SilentNAL449L0.18
LUADchr12101329450Splice_SitenovelX1139_splice0.27
LUADchr12101363654SilentnovelR1957R0.1
LUADchr12101333375Frame_Shift_DelnovelD1165Tfs*390.3DRIM
LUADchr12101312053Missense_MutationnovelD777N0.05
LUADchr12101356927Frame_Shift_InsnovelL1847Ffs*690.13
LUADchr12101338934SilentNAS1330S0.28
LUADchr12101363709Missense_MutationNAD1975G0.52
LUADchr12101312225Missense_MutationNAR834T0.13
LUADchr12101312256Silentrs768715409P844P0.22
LUADchr12101346554Missense_MutationnovelA1617V0.26
LUADchr12101334443Missense_MutationNAE1194Q0.13DRIM
LUADchr12101308307SilentNAV706V0.3
LUADchr12101367877SilentNAL2095L0.09
LUADchr12101338121Missense_Mutationrs572010130I1238V0.08DRIM
LUADchr12101329295Missense_MutationNAV1088G0.07DRIM
LUADchr12101366642Missense_MutationNAQ2070H0.21
LUADchr12101308188Missense_MutationnovelD667N0.33
LUADchr12101290964Intronnovel0.15
LUADchr12101354889Missense_MutationNAD1722G0.49
LUADchr12101285758Missense_MutationnovelY68C0.22
LUADchr12101373747Missense_MutationnovelT2371A0.31
LUADchr12101288968Missense_MutationnovelS175I0.52
LUADchr12101329361Missense_MutationnovelH1110R0.62DRIM
LUADchr12101285863Frame_Shift_DelnovelY104Ifs*280.33
LUSCchr121013861383'UTRnovel0.04
LUSCchr12101312182Missense_MutationnovelF820V0.21
LUSCchr12101375714Frame_Shift_InsnovelQ2453Sfs*70.14
LUSCchr12101338077Missense_MutationnovelK1223R0.23DRIM
LUSCchr12101375644SilentnovelE2428E0.29
LUSCchr12101356933SilentNAL1848L0.17
LUSCchr12101281186Missense_MutationnovelS39I0.3
LUSCchr121013862073'UTRnovel0.48
LUSCchr12101319587SilentnovelN927N0.14
LUSCchr12101338260Missense_MutationnovelI1284K0.22DRIM
LUSCchr12101365492SilentnovelR1998R0.11
LUSCchr12101281150Missense_MutationnovelN27I0.41
LUSCchr12101374859Missense_MutationNAE2395Q0.15
LUSCchr12101355098Missense_MutationnovelH1792N0.08
LUSCchr12101286369Missense_MutationnovelH125Q0.24
LUSCchr12101286335Missense_MutationnovelL114W0.17
LUSCchr12101366616Frame_Shift_DelnovelP2063Qfs*120.3
LUSCchr12101383249Missense_MutationnovelL2622W0.29
LUSCchr12101290763Missense_MutationNAP256T0.11
LUSCchr12101354981Missense_MutationnovelK1753E0.21
LUSCchr12101299977Missense_MutationNAL531V0.41
LUSCchr12101345571SilentnovelY1541Y0.19
LUSCchr12101379439Frame_Shift_DelnovelL2489Sfs*270.18
LUSCchr12101308264Missense_Mutationrs767178349Y692C0.33
LUSCchr12101308323Missense_MutationNAP712A0.25
LUSCchr12101285749Missense_MutationnovelG65E0.06
LUSCchr12101385604Missense_Mutationrs760164413S2693F0.3
LUSCchr12101369825SilentNAL2163L0.15
LUSCchr12101352138Missense_MutationnovelL1656F0.17
LUSCchr12101327183Frame_Shift_DelnovelQ1049Lfs*80.14DRIM
LUSCchr12101344723Missense_MutationNAL1526F0.27DRIM
LUSCchr12101286421Missense_MutationNAE143Q0.05
LUSCchr12101327179Missense_Mutationrs760099420G1047V0.2DRIM
LUSCchr12101338251Missense_MutationnovelY1281C0.04DRIM
LUSCchr12101308313SilentnovelQ708Q0.27
LUSCchr12101375711Missense_MutationnovelI2451V0.15
LUSCchr12101338106Missense_MutationNAT1233S0.27DRIM
LUSCchr12101327228SilentNAP1063P0.26
LUSCchr12101302555Splice_SitenovelX594_splice0.3
LUSCchr12101374892Missense_MutationnovelV2406I0.14
MESOchr12101362025Missense_Mutationrs779982797G1919R0.4
MESOchr12101312075Missense_MutationnovelV784A0.05
MESOchr12101285759SilentnovelY68Y0.3
OVchr12101329300Missense_MutationNAP1090S0.4DRIM
OVchr12101290258Missense_MutationNAH240L0.85
OVchr12101363671Nonsense_Mutationrs747596099Y1962*0.17
OVchr12101292082Missense_MutationnovelL384H0.09
OVchr12101292082Missense_MutationnovelL384H0.04
OVchr12101291791Missense_MutationNAE314G0.28
OVchr121013863423'UTRnovel0.44
OVchr12101369721Missense_MutationnovelV2129M0.05
OVchr12101355011Missense_MutationnovelS1763A0.08
OVchr12101369755Missense_MutationnovelV2140A0.04
OVchr12101329418Missense_MutationNAT1129N0.28DRIM
OVchr12101308181Splice_SitenovelX666_splice0.25
PAADchr12101361983Missense_Mutationrs76643734V1905I0.23
PAADchr12101295518Nonsense_MutationnovelC430*0.25
PAADchr12101366589SilentnovelL2053L0.18
PRADchr12101363616Missense_MutationnovelK1944R0.31
PRADchr12101371076SilentNAL2236L0.21
PRADchr12101327097Missense_MutationNAM1020V0.37DRIM
PRADchr12101379499Missense_MutationNAK2509E0.37
PRADchr12101372938SilentNAL2285L0.09
PRADchr12101295656Frame_Shift_Delnovel0.34
PRADchr12101308308Missense_Mutationrs765182802V707I0.33
PRADchr12101333428Missense_MutationnovelG1182D0.45DRIM
PRADchr12101369849Silentrs139074123A2171A0.28
READchr12101317637Missense_MutationNAK904N0.31
READchr12101342476Missense_MutationnovelQ1378K0.18DRIM
READchr12101371093SilentNAI2241I0.15
READchr12101365513Missense_Mutationrs143153802R2005C0.34
READchr12101352184SilentNAL1672L0.32
READchr12101290933Intronnovel0.25
READchr12101290896Splice_Regionnovel0.4
READchr12101308239Missense_MutationnovelL684F0.32
READchr12101334445Missense_MutationnovelE1194D0.44DRIM
READchr12101342952Silentrs751110666F1436F0.37
READchr12101379433Missense_MutationnovelF2487V0.48
READchr12101334492Missense_MutationNAS1210N0.46DRIM
SARCchr12101321555SilentnovelV989V0.61
SARCchr12101334478SilentnovelL1205L0.62
SKCMchr12101321627Missense_MutationNAM1013I0.3DRIM
SKCMchr12101374867SilentNAV2397V0.48
SKCMchr12101306003Nonsense_MutationNAQ624*0.32
SKCMchr12101373622Missense_MutationnovelP2329L0.14
SKCMchr12101356658SilentNAS1833S0.45
SKCMchr12101286398Missense_Mutationrs147399996S135L0.3
SKCMchr12101290261Missense_Mutationrs776616066S241F0.21
SKCMchr12101327140Missense_MutationNAS1034L0.3DRIM
SKCMchr12101299702Missense_MutationNAK484M0.86
SKCMchr12101286424Missense_MutationNAL144M0.4
SKCMchr12101317627Missense_MutationNAS901F1
SKCMchr12101373435Missense_MutationNAE2305K0.91
SKCMchr12101306001Missense_MutationNAS623F0.18
SKCMchr12101285635Splice_Regionrs143038674F64F0.48
SKCMchr12101369752Nonsense_MutationNAW2139*0.44
SKCMchr12101369831SilentNAD2165D0.87
SKCMchr12101329309Missense_Mutationrs552660501R1093C0.34DRIM
SKCMchr12101309820Missense_MutationNAP738S0.33
SKCMchr12101346463Missense_MutationNAA1587T0.11
SKCMchr12101354989Silentrs372995650S1755S0.3
SKCMchr12101290946Intronnovel0.17
SKCMchr12101312240Missense_MutationnovelS839F0.32
SKCMchr12101317512Missense_MutationNAP863T0.41
SKCMchr12101352078SilentnovelA1636A0.35
SKCMchr12101365539SilentNAV2013V0.85
SKCMchr12101338169Missense_MutationNAD1254N0.46DRIM
SKCMchr12101309772Missense_MutationNAR722C0.15
SKCMchr12101383641SilentnovelR2676R0.16
SKCMchr12101309772Missense_MutationNAR722C0.11
SKCMchr12101327155Missense_MutationnovelA1039V0.27DRIM
SKCMchr12101300046Missense_MutationNAG554R0.04
SKCMchr12101308322SilentnovelV711V0.43
SKCMchr12101290833Missense_MutationnovelS279F0.34
SKCMchr12101353096Missense_MutationNAE1692K0.07
SKCMchr12101346453Splice_RegionNAI1583I0.1
SKCMchr12101292072Missense_MutationnovelP381S0.27
SKCMchr12101321597SilentNAA1003A0.24
SKCMchr12101286446Missense_Mutationrs376796297S151L0.54
STADchr12101365608Silentrs768499716L2036L0.15
STADchr12101373461Silentrs199582058T2313T0.2
STADchr12101342579Missense_Mutationrs200766524T1412M0.48DRIM
STADchr12101381147Missense_MutationnovelS2531I0.28
STADchr12101329371Silentrs144955025S1113S0.25
STADchr12101285841Missense_Mutationrs779027623L96V0.16
STADchr12101379523Missense_MutationNAA2517S0.1
STADchr12101327094Nonsense_MutationNAR1019*0.35DRIM
STADchr12101356613Silentrs577076209V1818V0.48
STADchr12101374808Missense_Mutationrs760622502R2378C0.42
STADchr12101299757SilentNAS502S0.1
STADchr12101379476Missense_Mutationrs761229316Q2501R0.11
STADchr12101385998Frame_Shift_DelnovelM2747*0.15
STADchr12101300003SilentnovelL539L0.05
STADchr12101369865Missense_MutationnovelF2177V0.06
STADchr12101345576Missense_MutationNAT1543I0.31
STADchr12101290888Splice_RegionNAQ297Q0.15
STADchr12101342952Silentrs751110666F1436F0.4
STADchr12101345648Missense_MutationNAY1567C0.23
STADchr12101288984Frame_Shift_InsNAL183Tfs*90.22
STADchr12101342986Missense_Mutationrs768900064V1448I0.21DRIM
STADchr12101292104Splice_RegionNAK391K0.25
STADchr12101371093SilentNAI2241I0.18
STADchr12101383101Missense_MutationNAD2573N0.14
STADchr12101365510Missense_MutationNAL2004V0.22
STADchr12101327094Nonsense_MutationNAR1019*0.12DRIM
STADchr12101373667Missense_MutationNAK2344R0.27
STADchr12101327095Missense_Mutationrs376327544R1019Q0.33DRIM
STADchr12101286379Frame_Shift_Delrs761528888L131*0.28
STADchr12101290914Intronnovel0.17
STADchr12101327166Missense_Mutationrs771140706R1043W0.1DRIM
TGCTchr12101369825SilentNAL2163L0.07
THCAchr12101383270Missense_MutationNAI2629S0.09
THCAchr12101321591Frame_Shift_InsnovelT1002Yfs*240.06DRIM
THCAchr12101383198Frame_Shift_InsnovelK2606Ifs*40.05
THCAchr12101290964Intronnovel0.19
THCAchr12101370520Missense_MutationnovelI2215S0.25
THYMchr12101383194Missense_MutationnovelE2604K0.4
UCECchr12101357050Nonsense_MutationNAE1887*0.36
UCECchr12101363654Nonsense_Mutationrs780421838R1957*0.3
UCECchr12101381162Missense_MutationNAS2536Y0.28
UCECchr12101286343Missense_MutationnovelD117N0.04
UCECchr12101312080Missense_MutationNAD786Y0.37
UCECchr12101312185Missense_MutationNAR821G0.29
UCECchr121013864123'UTRnovel0.41
UCECchr12101281170Missense_MutationnovelI34V0.12
UCECchr12101302481Missense_MutationnovelT570N0.36
UCECchr12101357032Missense_MutationnovelL1881I0.11
UCECchr12101365574Missense_MutationnovelL2025P0.09
UCECchr12101373443Silentrs369272172I2307I0.31
UCECchr12101383569SilentnovelG2652G0.38
UCECchr12101308308Missense_Mutationrs765182802V707I0.13
UCECchr12101312210Missense_MutationNAT829N0.38
UCECchr12101333347Missense_MutationNAG1155V0.26DRIM
UCECchr12101381206Nonsense_MutationNAE2551*0.42
UCECchr12101293193Missense_Mutationrs201186982R400H0.44
UCECchr12101305994Missense_Mutationrs764486594P621S0.49
UCECchr12101338274Missense_MutationnovelG1289C0.41DRIM
UCECchr12101366631Nonsense_MutationNAR2067*0.44
UCECchr12101383191Missense_Mutationrs375163803G2603R0.38
UCECchr12101385600SilentnovelL2692L0.38
UCECchr12101373637Missense_Mutationrs756277930T2334M0.47
UCECchr12101311756Nonsense_MutationnovelK757*0.29
UCECchr12101319551Missense_MutationNAL915F0.48DRIM
UCECchr12101345644Missense_MutationNAH1566N0.43
UCECchr12101329372Missense_Mutationrs750578552A1114T0.28DRIM
UCECchr12101338118Missense_MutationNAA1237T0.44DRIM
UCECchr12101367906Missense_MutationnovelE2105G0.47
UCECchr12101374843SilentnovelG2389G0.38
UCECchr12101333364Missense_MutationnovelD1161H0.35DRIM
UCECchr12101299725Missense_Mutationrs765120524E492K0.42
UCECchr12101285627Nonsense_MutationnovelE62*0.41
UCECchr12101286447SilentNAS151S0.42
UCECchr12101290913Intronnovel0.31
UCECchr12101293181Missense_MutationnovelR396I0.38
UCECchr12101306008SilentnovelE625E0.39
UCECchr12101346515Missense_MutationnovelL1604P0.4
UCECchr12101365516Nonsense_Mutationrs754376370R2006*0.35
UCECchr12101281180Missense_MutationnovelT37I0.48
UCECchr12101340594Missense_Mutationrs766714525R1362H0.22DRIM
UCECchr12101366698Missense_Mutationrs139993869R2089Q0.53
UCECchr12101385993Missense_MutationnovelA2743V0.26
UCECchr12101383566Silentrs144429729L2651L0.44
UCECchr12101371097Nonsense_MutationnovelE2243*0.39
UCECchr12101319606Missense_MutationNAE934K0.16DRIM
UCECchr12101338916Missense_MutationnovelK1324N0.09DRIM
UCECchr12101352155Missense_MutationNAV1662A0.29
UCECchr12101286340Nonsense_MutationnovelR116*0.09
UCECchr12101338163Missense_MutationNAV1252I0.26DRIM
UCECchr12101372916SilentNAL2277L0.21
UCECchr12101352154Missense_MutationnovelV1662I0.58
UCECchr12101285627Nonsense_MutationnovelE62*0.08
UCECchr12101286447SilentNAS151S0.13
UCECchr12101338852Missense_MutationNAV1303A0.24DRIM
UCECchr12101383223Silentrs144467682L2613L0.23
UCECchr12101291850Missense_MutationnovelS334C0.17
UCECchr12101372946Silentrs766002145F2287F0.17
UCECchr12101309767Missense_Mutationrs150039308P720L0.07
UCECchr12101357035Missense_MutationnovelL1882I0.3
UCECchr12101286378Frame_Shift_Insrs769562021L131Ffs*270.33
UCECchr12101312225Missense_MutationNAR834T0.27
UCECchr12101369836Missense_MutationnovelA2167V0.2
UCECchr12101383131Missense_MutationNAE2583K0.37
UCECchr12101317563Missense_Mutationrs142705721E880K0.32
UCECchr12101338124Missense_Mutationrs185536134L1239I0.43DRIM
UCECchr12101285789Missense_MutationnovelF78L0.4
UCECchr12101370478Frame_Shift_DelnovelK2202Nfs*270.4
UCECchr121012801245'UTRnovel0.28
UCECchr12101285579Missense_MutationnovelT46P0.27
UCECchr12101344741SilentnovelS1532S0.33
UCECchr12101355069Missense_MutationnovelT1782I0.33
UCECchr12101372940Missense_MutationnovelL2285F0.38
UCECchr12101385667Missense_MutationnovelA2714V0.19
UCECchr12101383238Silentrs776605089T2618T0.28
UCECchr12101371061Missense_MutationnovelI2231F0.39
UCECchr12101374808Missense_Mutationrs760622502R2378C0.36
UCECchr12101381187SilentnovelF2544F0.47
UCECchr12101383190Silentrs369203212D2602D0.38
UCECchr12101383564Missense_MutationnovelL2651I0.35
UCECchr12101290933Intronnovel0.37
UCECchr12101285819SilentnovelI88I0.36
UCECchr12101353088Missense_MutationnovelK1689T0.53
UCECchr12101291979Nonsense_MutationNAQ350*0.53
UCECchr12101367955SilentNAC2121C0.08
UCECchr12101321601Nonsense_MutationnovelR1005*0.48DRIM
UCECchr12101334465Missense_MutationnovelP1201H0.54DRIM
UCECchr12101338904Silentrs756208046V1320V0.5
UCECchr12101295610Missense_Mutationrs773504931S461L0.44
UCECchr12101302477Missense_MutationnovelN569H0.46
UCECchr12101312165Missense_MutationnovelR814I0.42
UCECchr12101383612Missense_MutationnovelL2667I0.46
UCECchr12101302542Missense_MutationnovelK590N0.09
UCECchr12101369769SilentnovelL2145L0.32
UCECchr121013862023'UTRnovel0.33
UCECchr12101281182Missense_MutationnovelA38T0.46
UCECchr12101299725Missense_Mutationrs765120524E492K0.35
UCECchr12101311791Silentrs547678956T768T0.44
UCECchr12101342515Missense_MutationNAL1391I0.4DRIM
UCECchr12101375745Missense_MutationnovelS2462I0.08
UCECchr12101338137Missense_MutationnovelN1243S0.34DRIM
UCECchr12101365510SilentnovelL2004L0.34
UCECchr12101366683Missense_MutationnovelI2084T0.34
UCECchr12101290169Missense_MutationnovelM210I0.37
UCECchr12101333434Missense_MutationnovelV1184A0.34DRIM
UCECchr12101354892Missense_MutationnovelE1723G0.3
UCECchr12101373760Frame_Shift_InsNAR2378Afs*40.26
UCECchr12101383570Missense_Mutationrs779591681A2653T0.17
UCECchr12101309773Missense_MutationNAR722H0.13
UCECchr12101366631Nonsense_MutationNAR2067*0.23
UCECchr12101373623Silentrs763017663P2329P0.44
UCECchr12101371061Missense_Mutationrs766523697I2231V0.26
UCECchr12101311791Silentrs547678956T768T0.45
UCECchr12101354882Missense_MutationNAR1720C0.5
UCECchr12101290778Nonsense_MutationnovelE261*0.31
UCECchr12101290934Intronnovel0.33
UCECchr12101321559Missense_MutationnovelF991V0.31DRIM
UCECchr12101327244Missense_MutationnovelN1069H0.38DRIM
UCECchr12101342538Missense_MutationnovelF1398L0.08DRIM
UCECchr12101367897Missense_MutationnovelS2102Y0.44
UCECchr12101286379Frame_Shift_Delrs761528888L131*0.3
UCECchr12101329366Missense_MutationnovelI1112V0.3DRIM
UCECchr12101352074Missense_MutationnovelA1635V0.3
UCECchr12101338947Missense_MutationnovelI1335V0.29DRIM
UCECchr12101361974Missense_MutationnovelT1902S0.24
UCECchr12101383223Silentrs144467682L2613L0.5
UCECchr12101295521Missense_MutationNAF431L0.28
UCECchr12101345670SilentNAF1574F0.32
UCECchr12101373713Silentrs776363069L2359L0.33
UCECchr12101373698SilentnovelL2354L0.2
UCECchr12101285835Missense_MutationnovelT94A0.31
UCECchr12101291870Silentrs774061468T340T0.21
UCECchr12101306017Missense_MutationnovelM628I0.31
UCECchr12101353089SilentnovelK1689K0.33
UCECchr12101286379Frame_Shift_Delrs761528888L131*0.47
UCECchr12101373606Missense_Mutationrs142260891G2324R0.22
UCECchr12101383238Silentrs776605089T2618T0.27
UCECchr121013862443'UTRnovel0.31
UCECchr12101286378Frame_Shift_InsnovelF129Ifs*290.23
UCECchr12101375728Missense_MutationnovelK2456N0.36
UCECchr12101357029Frame_Shift_DelNAF1880Sfs*60.45
UCECchr12101372937Frame_Shift_InsnovelL2285Pfs*140.06
UCECchr12101302519Missense_MutationNAL583V0.45
UCECchr12101333416Missense_MutationNAA1178V0.47DRIM
UCECchr12101346527Missense_MutationNAS1608Y0.41
UCECchr12101290248Missense_MutationNAN237D0.41
UCECchr12101342982Silentrs780212979F1446F0.4
UCECchr12101333443Missense_MutationnovelQ1187P0.44DRIM
UCECchr12101312256Silentrs768715409P844P0.58
UCECchr12101333369SilentNAI1162I0.31
UCECchr12101356617Nonsense_Mutationrs747880391R1820*0.3
UCECchr12101367931SilentNAP2113P0.23
UCECchr12101286402Silentrs764033063I136I0.18
UCECchr12101293192Missense_MutationnovelR400C0.21
UCECchr12101344703Missense_Mutationrs140971531R1520C0.28DRIM
UCECchr12101366697Missense_Mutationrs368816848R2089W0.42
UCECchr12101290844Missense_MutationnovelY283H0.36
UCECchr12101334504Missense_MutationnovelR1214I0.48DRIM
UCECchr12101306018Nonsense_MutationnovelE629*0.09
UCECchr121013861413'UTRnovel0.14
UCECchr12101295646Missense_Mutationrs145108682P473L0.32
UCECchr12101306714Missense_MutationnovelI650L0.38
UCECchr12101329420Missense_MutationnovelV1130L0.28DRIM
UCECchr12101338274Missense_MutationnovelG1289S0.44DRIM
UCECchr12101365580Missense_MutationnovelY2027C0.47
UCECchr12101371093SilentNAI2241I0.3
UCECchr12101299725Missense_Mutationrs765120524E492K0.41
UCECchr12101327177Silentrs201637301A1046A0.4
UCSchr12101374809Missense_Mutationrs573079112R2378H0.29
UCSchr12101285776Missense_MutationnovelK74T0.29
UCSchr12101299720Missense_MutationnovelR490I0.23
UCSchr12101365567Missense_MutationnovelL2023I0.19

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCDEL0.03330.20414
CHOLDEL0.22220.067545
HNSCDEL0.05750.22646
LUADDEL0.14340.0059643
LUSCDEL0.09180.038823
PAADDEL0.19020.0030251
PRADAMP0.05890.016187
READDEL0.09090.064633
SKCMDEL0.20160.00079981

Survival Analysis
CancerP-value Q-value
KIRC0.002

Kaplan-Meier Survival Analysis

MESO0.00013

Kaplan-Meier Survival Analysis

ACC0.025

Kaplan-Meier Survival Analysis

SKCM0.027

Kaplan-Meier Survival Analysis

BRCA0.023

Kaplan-Meier Survival Analysis

KIRP0.032

Kaplan-Meier Survival Analysis

READ0.044

Kaplan-Meier Survival Analysis

LIHC0.0012

Kaplan-Meier Survival Analysis

OV0.015

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000120800 (Gene tree)
Gene ID
27340
Gene Symbol
UTP20
Alias
DRIM|1A6/DRIM
Full Name
UTP20 small subunit processome component
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
106,511 bases
Position
chr12:101,280,109-101,386,619
Accession
17897
RBP type
canonical RBP
Summary
UTP20 is a component of the U3 small nucleolar RNA (snoRNA) (SNORD3A; MIM 180710) protein complex (U3 snoRNP) and is involved in 18S rRNA processing (Wang et al., 2007 [PubMed 17498821]).[supplied by OMIM, Jun 2009]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000261637DRIMPF07539.123.8e-17411
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
21685478Divergent RNA binding specificity of yeast Puf2p.RNA2011 AugYosefzon Ydoi: 10.1261/rna.2700311
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000261637UTP20-2019025-ENSP000002616372785 (aa)-O75691
ENST00000551825UTP20-2031585--- (aa)--
ENST00000551998UTP20-204601--- (aa)--
ENST00000551345UTP20-202498--- (aa)--
Gene Model
Click here to download ENSG00000120800's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000120800Triglycerides8.92867062781078E-517903299
ENSG00000120800Brain Mapping3E-620197096
ENSG00000120800Hippocampus3E-620197096
ENSG00000120800Vascular Calcification7E-617903303
ENSG00000120800Alcoholism4E-824962325
ENSG00000120800Age of Onset4E-824962325
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000120800rs5708369312101348402CAlcohol dependence (age at onset)24962325[1.23-1.47]1.35EFO_0004847|EFO_0003829
ENSG00000120800rs229072012101293265GBrain structure (hippocampal volume)20197096[NR] unit decrease148.1EFO_0004464|EFO_0005035
ENSG00000120800rs1050713012101360176?Coronary artery calcification17903303EFO_0004723
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000120800's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000120800UTP2010056.655ENSAPOG00000002429utp209956.741Acanthochromis_polyacanthus
ENSG00000120800UTP2010090.665ENSAMEG00000016416UTP2010090.629Ailuropoda_melanoleuca
ENSG00000120800UTP2010056.105ENSACIG00000007987utp209956.192Amphilophus_citrinellus
ENSG00000120800UTP206056.439ENSAOCG00000015055utp209656.584Amphiprion_ocellaris
ENSG00000120800UTP2010056.479ENSAPEG00000011605utp209957.720Amphiprion_percula
ENSG00000120800UTP209855.362ENSATEG00000005601utp209955.592Anabas_testudineus
ENSG00000120800UTP209969.054ENSAPLG00000015651UTP2010069.090Anas_platyrhynchos
ENSG00000120800UTP2010067.925ENSACAG00000011671UTP2010067.925Anolis_carolinensis
ENSG00000120800UTP2010094.075ENSANAG00000027152UTP2010094.075Aotus_nancymaae
ENSG00000120800UTP209559.524ENSACLG00000008064utp209959.524Astatotilapia_calliptera
ENSG00000120800UTP2010056.303ENSAMXG00000021039utp209956.551Astyanax_mexicanus
ENSG00000120800UTP2010089.274ENSBTAG00000003239UTP2010089.238Bos_taurus
ENSG00000120800UTP2010095.727ENSCJAG00000001913UTP2010095.727Callithrix_jacchus
ENSG00000120800UTP2010089.996ENSCAFG00000006964UTP2010089.996Canis_familiaris
ENSG00000120800UTP2010089.996ENSCAFG00020024305UTP2010089.996Canis_lupus_dingo
ENSG00000120800UTP2010089.346ENSCHIG00000009221UTP2010089.060Capra_hircus
ENSG00000120800UTP2010088.622ENSTSYG00000003040UTP2010088.622Carlito_syrichta
ENSG00000120800UTP209975.793ENSCAPG00000014920UTP2010075.612Cavia_aperea
ENSG00000120800UTP2010078.607ENSCPOG00000003129UTP2010078.607Cavia_porcellus
ENSG00000120800UTP2010096.086ENSCCAG00000031422UTP2010096.086Cebus_capucinus
ENSG00000120800UTP2010094.446ENSCATG00000035636UTP2010094.446Cercocebus_atys
ENSG00000120800UTP2010082.226ENSCLAG00000011569UTP2010082.226Chinchilla_lanigera
ENSG00000120800UTP2010097.810ENSCSAG00000003388UTP2010097.810Chlorocebus_sabaeus
ENSG00000120800UTP209295.455ENSCHOG00000003532UTP209495.455Choloepus_hoffmanni
ENSG00000120800UTP209570.621ENSCPBG00000004844UTP209970.793Chrysemys_picta_bellii
ENSG00000120800UTP209330.466ENSCSAVG00000008252-9930.466Ciona_savignyi
ENSG00000120800UTP2010093.896ENSCANG00000034768UTP2010096.284Colobus_angolensis_palliatus
ENSG00000120800UTP2010086.855ENSCGRG00001017151Utp2010086.819Cricetulus_griseus_chok1gshd
ENSG00000120800UTP2010086.430ENSCGRG00000008595Utp2010086.395Cricetulus_griseus_crigri
ENSG00000120800UTP209854.569ENSCSEG00000014760utp209954.509Cynoglossus_semilaevis
ENSG00000120800UTP209954.084ENSCVAG00000001727utp209954.545Cyprinodon_variegatus
ENSG00000120800UTP209957.062ENSDARG00000099280utp209957.311Danio_rerio
ENSG00000120800UTP2010088.817ENSDNOG00000016845UTP2010088.782Dasypus_novemcinctus
ENSG00000120800UTP209985.550ENSDORG00000014762Utp209985.441Dipodomys_ordii
ENSG00000120800UTP209491.189ENSETEG00000019983UTP209492.731Echinops_telfairi
ENSG00000120800UTP2010091.055ENSEASG00005019981UTP209992.286Equus_asinus_asinus
ENSG00000120800UTP2010091.377ENSECAG00000006876UTP2010091.377Equus_caballus
ENSG00000120800UTP207287.825ENSEEUG00000003774UTP207587.825Erinaceus_europaeus
ENSG00000120800UTP2010055.895ENSELUG00000000798utp209956.139Esox_lucius
ENSG00000120800UTP2010090.560ENSFCAG00000006150UTP2010090.560Felis_catus
ENSG00000120800UTP209466.980ENSFALG00000011135UTP2010067.474Ficedula_albicollis
ENSG00000120800UTP209382.812ENSFDAG00000007567UTP209682.812Fukomys_damarensis
ENSG00000120800UTP209852.620ENSFHEG00000004142utp209954.562Fundulus_heteroclitus
ENSG00000120800UTP209951.994ENSGMOG00000006762utp2010052.573Gadus_morhua
ENSG00000120800UTP2010068.855ENSGALG00000011643UTP2010068.970Gallus_gallus
ENSG00000120800UTP209753.945ENSGAFG00000006986utp209953.824Gambusia_affinis
ENSG00000120800UTP2010054.863ENSGACG00000019092utp2010054.982Gasterosteus_aculeatus
ENSG00000120800UTP206771.429ENSGAGG00000011169UTP209771.299Gopherus_agassizii
ENSG00000120800UTP2010098.384ENSGGOG00000004904UTP2010098.384Gorilla_gorilla
ENSG00000120800UTP2010055.587ENSHBUG00000010613utp209956.237Haplochromis_burtoni
ENSG00000120800UTP2010080.997ENSHGLG00000006422UTP2010081.033Heterocephalus_glaber_female
ENSG00000120800UTP2010079.140ENSHGLG00100001086UTP2010079.176Heterocephalus_glaber_male
ENSG00000120800UTP2010053.594ENSHCOG00000005421utp209954.613Hippocampus_comes
ENSG00000120800UTP2010056.361ENSIPUG00000013717utp209956.397Ictalurus_punctatus
ENSG00000120800UTP2010089.656ENSSTOG00000015995UTP2010089.656Ictidomys_tridecemlineatus
ENSG00000120800UTP2010085.294ENSJJAG00000019321Utp2010085.294Jaculus_jaculus
ENSG00000120800UTP2010053.681ENSKMAG00000005972utp209953.984Kryptolebias_marmoratus
ENSG00000120800UTP209854.263ENSLBEG00000000781utp209954.585Labrus_bergylta
ENSG00000120800UTP207965.155ENSLACG00000010098UTP2010065.335Latimeria_chalumnae
ENSG00000120800UTP209359.854ENSLOCG00000015197utp209959.879Lepisosteus_oculatus
ENSG00000120800UTP2010088.695ENSLAFG00000012983UTP2010088.837Loxodonta_africana
ENSG00000120800UTP2010097.989ENSMFAG00000037766UTP2010097.989Macaca_fascicularis
ENSG00000120800UTP2010098.025ENSMMUG00000012891UTP2010098.025Macaca_mulatta
ENSG00000120800UTP2010095.691ENSMNEG00000037418UTP2010095.691Macaca_nemestrina
ENSG00000120800UTP2010095.120ENSMLEG00000029148UTP2010095.120Mandrillus_leucophaeus
ENSG00000120800UTP2010055.468ENSMAMG00000002063utp209956.019Mastacembelus_armatus
ENSG00000120800UTP2010055.946ENSMZEG00005018123utp209956.317Maylandia_zebra
ENSG00000120800UTP2010068.561ENSMGAG00000011726UTP2010068.995Meleagris_gallopavo
ENSG00000120800UTP206587.000ENSMAUG00000011898Utp2010087.000Mesocricetus_auratus
ENSG00000120800UTP2010089.132ENSMICG00000015736UTP2010089.132Microcebus_murinus
ENSG00000120800UTP2010083.333ENSMOCG00000015242Utp2010083.297Microtus_ochrogaster
ENSG00000120800UTP2010053.058ENSMMOG00000003360utp2010053.546Mola_mola
ENSG00000120800UTP2010074.652ENSMODG00000003141UTP2010074.503Monodelphis_domestica
ENSG00000120800UTP2010055.567ENSMALG00000002723utp209955.425Monopterus_albus
ENSG00000120800UTP2010085.663MGP_CAROLIEiJ_G0015713Utp2010085.627Mus_caroli
ENSG00000120800UTP2010085.991ENSMUSG00000004356Utp2010085.847Mus_musculus
ENSG00000120800UTP2010085.950MGP_PahariEiJ_G0031372Utp2010085.914Mus_pahari
ENSG00000120800UTP2010085.960MGP_SPRETEiJ_G0016531Utp209892.857Mus_spretus
ENSG00000120800UTP2010090.273ENSMPUG00000011641UTP2010090.273Mustela_putorius_furo
ENSG00000120800UTP2010090.032ENSMLUG00000002313UTP2010090.032Myotis_lucifugus
ENSG00000120800UTP2010087.908ENSNGAG00000013738Utp2010087.908Nannospalax_galili
ENSG00000120800UTP208275.385ENSNBRG00000019464utp209975.385Neolamprologus_brichardi
ENSG00000120800UTP2010098.241ENSNLEG00000006166UTP2010098.241Nomascus_leucogenys
ENSG00000120800UTP209196.296ENSMEUG00000015457UTP209196.296Notamacropus_eugenii
ENSG00000120800UTP208694.904ENSOPRG00000010546UTP208794.904Ochotona_princeps
ENSG00000120800UTP2010081.508ENSODEG00000013411UTP2010081.616Octodon_degus
ENSG00000120800UTP209255.952ENSONIG00000009910utp2010056.326Oreochromis_niloticus
ENSG00000120800UTP209972.984ENSOANG00000005578UTP209973.162Ornithorhynchus_anatinus
ENSG00000120800UTP2010089.982ENSOCUG00000010475UTP2010089.982Oryctolagus_cuniculus
ENSG00000120800UTP209355.923ENSORLG00000008900utp209955.981Oryzias_latipes
ENSG00000120800UTP209356.127ENSORLG00020005879utp209956.127Oryzias_latipes_hni
ENSG00000120800UTP209654.394ENSORLG00015002843utp209954.351Oryzias_latipes_hsok
ENSG00000120800UTP209853.804ENSOMEG00000023583utp209953.860Oryzias_melastigma
ENSG00000120800UTP2010090.061ENSOGAG00000015130UTP2010090.025Otolemur_garnettii
ENSG00000120800UTP2010089.274ENSOARG00000014722UTP2010089.238Ovis_aries
ENSG00000120800UTP2010099.354ENSPPAG00000001381UTP2010099.354Pan_paniscus
ENSG00000120800UTP2010090.775ENSPPRG00000001026UTP2010090.775Panthera_pardus
ENSG00000120800UTP2010090.811ENSPTIG00000020972UTP2010090.811Panthera_tigris_altaica
ENSG00000120800UTP2010099.390ENSPTRG00000005349UTP2010099.390Pan_troglodytes
ENSG00000120800UTP2010097.846ENSPANG00000020388UTP2010097.846Papio_anubis
ENSG00000120800UTP2010055.442ENSPKIG00000007196utp209955.960Paramormyrops_kingsleyae
ENSG00000120800UTP209469.947ENSPSIG00000016689UTP2010070.159Pelodiscus_sinensis
ENSG00000120800UTP2010055.508ENSPMGG00000004066utp209955.682Periophthalmus_magnuspinnatus
ENSG00000120800UTP2010086.052ENSPEMG00000024120Utp2010086.303Peromyscus_maniculatus_bairdii
ENSG00000120800UTP2010074.511ENSPCIG00000009298UTP2010074.298Phascolarctos_cinereus
ENSG00000120800UTP209253.787ENSPFOG00000003312utp2010054.103Poecilia_formosa
ENSG00000120800UTP209852.721ENSPLAG00000012874utp209956.333Poecilia_latipinna
ENSG00000120800UTP209852.812ENSPMEG00000005915utp209955.577Poecilia_mexicana
ENSG00000120800UTP209853.613ENSPREG00000013285utp209953.849Poecilia_reticulata
ENSG00000120800UTP208898.043ENSPPYG00000004871UTP2010098.043Pongo_abelii
ENSG00000120800UTP208193.939ENSPCAG00000012791UTP208393.939Procavia_capensis
ENSG00000120800UTP209692.927ENSPCOG00000024948UTP2010092.927Propithecus_coquereli
ENSG00000120800UTP2010089.343ENSPVAG00000008113UTP2010089.343Pteropus_vampyrus
ENSG00000120800UTP2010055.983ENSPNYG00000011561utp209956.078Pundamilia_nyererei
ENSG00000120800UTP2010056.625ENSPNAG00000006176utp209956.773Pygocentrus_nattereri
ENSG00000120800UTP2010085.791ENSRNOG00000005823Utp2010085.878Rattus_norvegicus
ENSG00000120800UTP2010095.591ENSRBIG00000025384UTP2010095.591Rhinopithecus_bieti
ENSG00000120800UTP2010097.702ENSRROG00000041254UTP2010097.702Rhinopithecus_roxellana
ENSG00000120800UTP2010096.266ENSSBOG00000035762UTP2010096.266Saimiri_boliviensis_boliviensis
ENSG00000120800UTP209871.537ENSSHAG00000002298UTP209971.496Sarcophilus_harrisii
ENSG00000120800UTP2010058.943ENSSFOG00015001674utp2010059.093Scleropages_formosus
ENSG00000120800UTP209852.823ENSSMAG00000016460utp209952.851Scophthalmus_maximus
ENSG00000120800UTP2010056.800ENSSDUG00000013730utp209956.755Seriola_dumerili
ENSG00000120800UTP2010056.753ENSSLDG00000012844utp209956.763Seriola_lalandi_dorsalis
ENSG00000120800UTP2065100.000ENSSARG00000002796-62100.000Sorex_araneus
ENSG00000120800UTP209968.047ENSSPUG00000004513UTP209967.986Sphenodon_punctatus
ENSG00000120800UTP2010056.228ENSSPAG00000014674utp209956.499Stegastes_partitus
ENSG00000120800UTP2010090.379ENSSSCG00000000869UTP2010090.343Sus_scrofa
ENSG00000120800UTP207668.306ENSTGUG00000009053-10069.015Taeniopygia_guttata
ENSG00000120800UTP209955.883ENSTRUG00000005849utp209956.112Takifugu_rubripes
ENSG00000120800UTP2010053.968ENSTNIG00000006921utp2010054.168Tetraodon_nigroviridis
ENSG00000120800UTP209083.610ENSTBEG00000011917UTP209283.610Tupaia_belangeri
ENSG00000120800UTP209986.508ENSTTRG00000017195UTP2010086.228Tursiops_truncatus
ENSG00000120800UTP2010090.841ENSUAMG00000016363UTP2010090.805Ursus_americanus
ENSG00000120800UTP2010090.125ENSUMAG00000000077UTP2010090.089Ursus_maritimus
ENSG00000120800UTP208992.602ENSVPAG00000011620UTP209292.602Vicugna_pacos
ENSG00000120800UTP2010089.961ENSVVUG00000018110UTP2010089.961Vulpes_vulpes
ENSG00000120800UTP209863.445ENSXETG00000032346UTP2010063.673Xenopus_tropicalis
ENSG00000120800UTP209853.326ENSXMAG00000006503utp2010053.258Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000447endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)15590835.ISSProcess
GO:0000472endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)17652137.ISSProcess
GO:0000480endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)17652137.ISSProcess
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005515protein binding16053918.17498821.IPIFunction
GO:0005654nucleoplasm17652137.ISSComponent
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus16458307.IDAComponent
GO:0005730nucleolus15590835.ISSComponent
GO:0005737cytoplasm17652137.ISSComponent
GO:0005886plasma membrane-IDAComponent
GO:0006364rRNA processing17498821.IMPProcess
GO:0006364rRNA processing-TASProcess
GO:0008285negative regulation of cell proliferation9673349.TASProcess
GO:003068690S preribosome21873635.IBAComponent
GO:003068690S preribosome12150911.ISSComponent
GO:0030688preribosome, small subunit precursor17652137.ISSComponent
GO:0032040small-subunit processome21873635.IBAComponent
GO:0032040small-subunit processome15590835.ISSComponent
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