EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchrX103825479SilentnovelQ102Q0.41
BLCAchrX103825400Missense_MutationNAE129K0.49
BLCAchrX103825406Missense_MutationnovelD127N0.61
BRCAchrX103825703Missense_MutationNAV28I0.15MMR_HSR1
BRCAchrX103825742Missense_MutationNAD15Y0.38MMR_HSR1
BRCAchrX103825703Missense_MutationNAV28I0.09MMR_HSR1
BRCAchrX103825759Missense_MutationNAK9T0.36MMR_HSR1
BRCAchrX1038251183'UTRnovel0.05
BRCAchrX103825353Missense_MutationnovelE144D0.16
BRCAchrX103825420Missense_MutationNAL122R0.28
BRCAchrX103825720Missense_MutationNAS22L0.17MMR_HSR1
CESCchrX103825400Missense_MutationnovelE129Q0.26
CESCchrX103825332Missense_MutationnovelL151F0.36
COADchrX103825405Missense_MutationnovelD127G0.35
COADchrX103825348Missense_MutationnovelG146V0.42
COADchrX103825824Splice_Regionnovel0.05
COADchrX103825704Silentrs141822799Y27Y0.18
GBMchrX103825458Silentrs142893082A109A0.35
GBMchrX103825607Missense_MutationNAI60V0.35MMR_HSR1
HNSCchrX1038258115'UTRnovel0.06
HNSCchrX103825312Missense_MutationnovelD158G0.57
KIRCchrX103825331Missense_MutationNAE152K0.05
LIHCchrX103825388Missense_MutationNAV133M0.7
LUADchrX103825259Missense_MutationNAE176Q0.1
LUADchrX103825448Missense_MutationNAD113N0.23
LUADchrX103825755SilentnovelV10V0.24
LUADchrX103825782Translation_Start_SiteNAM1?0.19
LUADchrX103825445Missense_MutationNAP114S0.47
LUADchrX103825736Nonsense_MutationNAG17*0.29MMR_HSR1
LUSCchrX103825743SilentnovelG14G0.46
LUSCchrX103825771Missense_MutationnovelS5F0.19
OVchrX1038251703'UTRnovel0.5
OVchrX103825427Frame_Shift_DelnovelV120*0.08
READchrX1038251023'UTRnovel0.21
READchrX103825257Missense_Mutationrs754287809E176D0.86
SARCchrX103825733Missense_MutationnovelV18F0.37MMR_HSR1
SKCMchrX1038258075'UTRnovel0.59
SKCMchrX103825382Missense_MutationNAT135P0.34
STADchrX103825521SilentNAS88S0.05
STADchrX103825482Nonsense_MutationNAW101*0.71MMR_HSR1
STADchrX103825583Missense_MutationNAR68C0.27MMR_HSR1
THCAchrX1038258115'UTRnovel0.05
UCECchrX103825568Missense_MutationNAR73G0.36MMR_HSR1
UCECchrX103825720Missense_MutationNAS22L0.38MMR_HSR1
UCECchrX103825749SilentnovelL12L0.25
UCECchrX103825643Missense_MutationnovelD48Y0.42MMR_HSR1
UCECchrX1038258235'UTRnovel0.38
UCECchrX103825755SilentnovelV10V0.19
UCECchrX103825189Missense_Mutationrs761856500S199L0.06
UCECchrX103825678Missense_MutationnovelA36V0.11MMR_HSR1
UCECchrX103825751Missense_MutationnovelL12I0.54MMR_HSR1
UCECchrX103825301Missense_MutationnovelT162A0.33
UCECchrX1038250733'UTRnovel0.47
UCECchrX103825192Missense_MutationnovelS198F0.11
UCECchrX103825544Missense_MutationNAD81Y0.38MMR_HSR1
UCECchrX103825755SilentnovelV10V0.08
UCECchrX103825703Missense_MutationNAV28I0.24MMR_HSR1
UCECchrX103825239SilentNAC182C0.22
UCECchrX103825720Missense_MutationNAS22L0.08MMR_HSR1
UCECchrX103825720Missense_MutationNAS22L0.35MMR_HSR1
UCECchrX1038251023'UTRnovel0.07
UCECchrX103825471Missense_MutationnovelF105C0.07
UCECchrX1038251023'UTRnovel0.37
UCSchrX1038258235'UTRnovel0.29

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
KIRCAMP0.02650.12739
THCADEL00.21991

Survival Analysis
CancerP-value Q-value
THYM0.0035

Kaplan-Meier Survival Analysis

STAD0.0054

Kaplan-Meier Survival Analysis

MESO0.024

Kaplan-Meier Survival Analysis

ACC0.018

Kaplan-Meier Survival Analysis

HNSC0.022

Kaplan-Meier Survival Analysis

LUSC0.044

Kaplan-Meier Survival Analysis

KIRP0.042

Kaplan-Meier Survival Analysis

PAAD0.0029

Kaplan-Meier Survival Analysis

PCPG0.0074

Kaplan-Meier Survival Analysis

UCEC0.00029

Kaplan-Meier Survival Analysis

LGG0.00013

Kaplan-Meier Survival Analysis

LUAD0.00011

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000123570 (Gene tree)
Gene ID
51209
Gene Symbol
RAB9B
Alias
RAB9L
Full Name
RAB9B, member RAS oncogene family
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
9,961 bases
Position
chrX:103,822,322-103,832,282
Accession
14090
RBP type
canonical RBP
Summary
This gene encodes a member of a subfamily of RAS small guanosine triphosphate (GTP)-binding proteins that regulate membrane trafficking. The encoded protein may be involved in endosome-to-Golgi transport. [provided by RefSeq, Jan 2010]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000243298MMR_HSR1PF01926.232e-0511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000243298RAB9B-2013748-ENSP00000243298201 (aa)-Q9NP90
Gene Model
Click here to download ENSG00000123570's gene model file
Pathways
Pathway IDPathway NameSource
hsa05162MeaslesKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000123570's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000123570RAB9B10076.238ENSAPOG00000007269rab9b8976.238Acanthochromis_polyacanthus
ENSG00000123570RAB9B10099.502ENSAMEG00000018531RAB9B10099.502Ailuropoda_melanoleuca
ENSG00000123570RAB9B10077.228ENSACIG00000007739rab9b9977.228Amphilophus_citrinellus
ENSG00000123570RAB9B10076.238ENSAOCG00000022810rab9b10076.238Amphiprion_ocellaris
ENSG00000123570RAB9B10076.238ENSAPEG00000014149rab9b10076.238Amphiprion_percula
ENSG00000123570RAB9B10077.723ENSATEG00000004488rab9b9677.723Anabas_testudineus
ENSG00000123570RAB9B10093.532ENSAPLG00000001949RAB9B10093.532Anas_platyrhynchos
ENSG00000123570RAB9B10086.070ENSACAG00000014318RAB9B10086.070Anolis_carolinensis
ENSG00000123570RAB9B10099.502ENSANAG00000031345RAB9B10099.502Aotus_nancymaae
ENSG00000123570RAB9B10076.733ENSACLG00000004795rab9b9176.733Astatotilapia_calliptera
ENSG00000123570RAB9B10079.703ENSAMXG00000026476rab9b9079.703Astyanax_mexicanus
ENSG00000123570RAB9B10099.502ENSBTAG00000019820RAB9B10099.502Bos_taurus
ENSG00000123570RAB9B10099.502ENSCJAG00000003347RAB9B10099.502Callithrix_jacchus
ENSG00000123570RAB9B10099.502ENSCAFG00000017812RAB9B10099.502Canis_familiaris
ENSG00000123570RAB9B10099.502ENSCHIG00000002776RAB9B10099.502Capra_hircus
ENSG00000123570RAB9B10099.502ENSTSYG00000008912RAB9B10099.502Carlito_syrichta
ENSG00000123570RAB9B10099.005ENSCCAG00000017812RAB9B10099.005Cebus_capucinus
ENSG00000123570RAB9B10099.502ENSCSAG00000000315RAB9B10099.502Chlorocebus_sabaeus
ENSG00000123570RAB9B10098.507ENSCHOG00000012678RAB9B10098.507Choloepus_hoffmanni
ENSG00000123570RAB9B10093.532ENSCPBG00000001542RAB9B10093.532Chrysemys_picta_bellii
ENSG00000123570RAB9B10099.502ENSCANG00000012854RAB9B10099.502Colobus_angolensis_palliatus
ENSG00000123570RAB9B10098.010ENSCGRG00001001220Rab9b10098.010Cricetulus_griseus_chok1gshd
ENSG00000123570RAB9B10097.015ENSCGRG00000002809Rab9b10097.015Cricetulus_griseus_crigri
ENSG00000123570RAB9B10078.218ENSCSEG00000014467rab9b9278.218Cynoglossus_semilaevis
ENSG00000123570RAB9B10075.743ENSCVAG00000021826rab9b10075.743Cyprinodon_variegatus
ENSG00000123570RAB9B10077.228ENSDARG00000103391rab9b10077.228Danio_rerio
ENSG00000123570RAB9B10099.005ENSDNOG00000032358RAB9B10099.005Dasypus_novemcinctus
ENSG00000123570RAB9B10099.502ENSETEG00000018698RAB9B10099.502Echinops_telfairi
ENSG00000123570RAB9B8668.786ENSEBUG00000004967rab9b8468.786Eptatretus_burgeri
ENSG00000123570RAB9B10099.502ENSEASG00005002563RAB9B10099.502Equus_asinus_asinus
ENSG00000123570RAB9B10099.502ENSECAG00000022069RAB9B10099.502Equus_caballus
ENSG00000123570RAB9B10099.005ENSEEUG00000005264RAB9B10099.005Erinaceus_europaeus
ENSG00000123570RAB9B10075.862ENSELUG00000004378rab9b10075.862Esox_lucius
ENSG00000123570RAB9B100100.000ENSFCAG00000000424RAB9B100100.000Felis_catus
ENSG00000123570RAB9B10095.025ENSFALG00000015153RAB9B10095.025Ficedula_albicollis
ENSG00000123570RAB9B10099.005ENSFDAG00000014776RAB9B10099.005Fukomys_damarensis
ENSG00000123570RAB9B10075.248ENSFHEG00000009417rab9b9275.248Fundulus_heteroclitus
ENSG00000123570RAB9B10079.310ENSGMOG00000020194rab9b9979.310Gadus_morhua
ENSG00000123570RAB9B10093.532ENSGALG00000004918RAB9B10093.532Gallus_gallus
ENSG00000123570RAB9B10075.248ENSGAFG00000004099rab9b9075.248Gambusia_affinis
ENSG00000123570RAB9B10076.733ENSGACG00000018291rab9b9976.733Gasterosteus_aculeatus
ENSG00000123570RAB9B10092.537ENSGAGG00000012314RAB9B10092.537Gopherus_agassizii
ENSG00000123570RAB9B10099.502ENSGGOG00000009507RAB9B10099.502Gorilla_gorilla
ENSG00000123570RAB9B10076.733ENSHBUG00000001595rab9b9176.733Haplochromis_burtoni
ENSG00000123570RAB9B10098.010ENSHGLG00000000448RAB9B10098.010Heterocephalus_glaber_female
ENSG00000123570RAB9B10098.010ENSHGLG00100003190RAB9B10098.010Heterocephalus_glaber_male
ENSG00000123570RAB9B10078.109ENSHCOG00000005024rab9b9978.109Hippocampus_comes
ENSG00000123570RAB9B10070.297ENSIPUG00000016561rab9b9170.297Ictalurus_punctatus
ENSG00000123570RAB9B10099.502ENSSTOG00000004081RAB9B10099.502Ictidomys_tridecemlineatus
ENSG00000123570RAB9B10076.238ENSKMAG00000019964rab9b10076.238Kryptolebias_marmoratus
ENSG00000123570RAB9B9977.500ENSLBEG00000011478rab9b9277.500Labrus_bergylta
ENSG00000123570RAB9B8989.326ENSLACG00000017891RAB9B8489.326Latimeria_chalumnae
ENSG00000123570RAB9B10099.502ENSLAFG00000000166RAB9B10099.502Loxodonta_africana
ENSG00000123570RAB9B10099.502ENSMFAG00000010320RAB9B10099.502Macaca_fascicularis
ENSG00000123570RAB9B10099.502ENSMMUG00000021198RAB9B10099.502Macaca_mulatta
ENSG00000123570RAB9B10099.502ENSMLEG00000027985RAB9B10099.502Mandrillus_leucophaeus
ENSG00000123570RAB9B10077.073ENSMAMG00000009927rab9b10077.073Mastacembelus_armatus
ENSG00000123570RAB9B10076.733ENSMZEG00005010392rab9b9176.733Maylandia_zebra
ENSG00000123570RAB9B10098.507ENSMAUG00000010219Rab9b10098.507Mesocricetus_auratus
ENSG00000123570RAB9B10099.005ENSMICG00000003057RAB9B10099.005Microcebus_murinus
ENSG00000123570RAB9B10096.517ENSMOCG00000010381Rab9b10096.517Microtus_ochrogaster
ENSG00000123570RAB9B9977.612ENSMMOG00000008669rab9b9177.612Mola_mola
ENSG00000123570RAB9B10095.025ENSMODG00000011531RAB9B10095.025Monodelphis_domestica
ENSG00000123570RAB9B10077.228ENSMALG00000007664rab9b9477.228Monopterus_albus
ENSG00000123570RAB9B10098.010MGP_CAROLIEiJ_G0033427Rab9b10098.010Mus_caroli
ENSG00000123570RAB9B10098.010ENSMUSG00000043463Rab9b10098.010Mus_musculus
ENSG00000123570RAB9B10098.010MGP_PahariEiJ_G0031967Rab9b10098.010Mus_pahari
ENSG00000123570RAB9B10098.010MGP_SPRETEiJ_G0034594Rab9b10098.010Mus_spretus
ENSG00000123570RAB9B10099.502ENSMPUG00000019218RAB9B10099.502Mustela_putorius_furo
ENSG00000123570RAB9B10099.005ENSMLUG00000028856RAB9B10099.005Myotis_lucifugus
ENSG00000123570RAB9B10098.010ENSNGAG00000011436Rab9b10098.010Nannospalax_galili
ENSG00000123570RAB9B10076.733ENSNBRG00000013940rab9b9176.733Neolamprologus_brichardi
ENSG00000123570RAB9B10099.502ENSNLEG00000018324RAB9B10099.502Nomascus_leucogenys
ENSG00000123570RAB9B10094.527ENSMEUG00000000993RAB9B10094.527Notamacropus_eugenii
ENSG00000123570RAB9B10099.502ENSOPRG00000015421RAB9B10099.502Ochotona_princeps
ENSG00000123570RAB9B10076.733ENSONIG00000020581rab9b10076.733Oreochromis_niloticus
ENSG00000123570RAB9B10095.025ENSOANG00000004230RAB9B10095.025Ornithorhynchus_anatinus
ENSG00000123570RAB9B10099.502ENSOCUG00000014809RAB9B10099.502Oryctolagus_cuniculus
ENSG00000123570RAB9B10075.248ENSORLG00000006405rab9b9675.248Oryzias_latipes
ENSG00000123570RAB9B10076.238ENSORLG00020009158rab9b9676.238Oryzias_latipes_hni
ENSG00000123570RAB9B10075.248ENSORLG00015004265rab9b9775.248Oryzias_latipes_hsok
ENSG00000123570RAB9B10076.733ENSOMEG00000008327rab9b9376.733Oryzias_melastigma
ENSG00000123570RAB9B10099.005ENSOGAG00000015082RAB9B10099.005Otolemur_garnettii
ENSG00000123570RAB9B10099.502ENSOARG00000009986RAB9B10099.502Ovis_aries
ENSG00000123570RAB9B100100.000ENSPPAG00000002892RAB9B100100.000Pan_paniscus
ENSG00000123570RAB9B100100.000ENSPPRG00000011181RAB9B100100.000Panthera_pardus
ENSG00000123570RAB9B100100.000ENSPTIG00000009359RAB9B100100.000Panthera_tigris_altaica
ENSG00000123570RAB9B100100.000ENSPTRG00000028227RAB9B100100.000Pan_troglodytes
ENSG00000123570RAB9B10099.502ENSPANG00000018955RAB9B10099.502Papio_anubis
ENSG00000123570RAB9B10078.818ENSPKIG00000014623rab9b9278.818Paramormyrops_kingsleyae
ENSG00000123570RAB9B10093.532ENSPSIG00000001871RAB9B10093.532Pelodiscus_sinensis
ENSG00000123570RAB9B10077.228ENSPMGG00000002496rab9b10077.228Periophthalmus_magnuspinnatus
ENSG00000123570RAB9B10095.025ENSPCIG00000020415RAB9B10095.025Phascolarctos_cinereus
ENSG00000123570RAB9B10075.248ENSPFOG00000020060rab9b10075.248Poecilia_formosa
ENSG00000123570RAB9B10075.248ENSPLAG00000011866rab9b9175.248Poecilia_latipinna
ENSG00000123570RAB9B10075.248ENSPMEG00000024399rab9b9175.248Poecilia_mexicana
ENSG00000123570RAB9B10075.248ENSPMEG00000013734rab9b9175.248Poecilia_mexicana
ENSG00000123570RAB9B10074.752ENSPREG00000006970rab9b9274.752Poecilia_reticulata
ENSG00000123570RAB9B10099.502ENSPPYG00000020591RAB9B10099.502Pongo_abelii
ENSG00000123570RAB9B10076.119ENSPCAG00000013418RAB9B10076.119Procavia_capensis
ENSG00000123570RAB9B10099.502ENSPCOG00000002853RAB9B10099.502Propithecus_coquereli
ENSG00000123570RAB9B55100.000ENSPVAG00000008773RAB9B100100.000Pteropus_vampyrus
ENSG00000123570RAB9B10076.733ENSPNYG00000000233rab9b9176.733Pundamilia_nyererei
ENSG00000123570RAB9B10079.208ENSPNAG00000018132rab9b9079.208Pygocentrus_nattereri
ENSG00000123570RAB9B10098.507ENSRNOG00000047960Rab9b10098.507Rattus_norvegicus
ENSG00000123570RAB9B10099.502ENSRROG00000025642RAB9B10099.502Rhinopithecus_roxellana
ENSG00000123570RAB9B10094.527ENSSHAG00000012788RAB9B10094.527Sarcophilus_harrisii
ENSG00000123570RAB9B10079.310ENSSFOG00015010492rab9b10079.310Scleropages_formosus
ENSG00000123570RAB9B10077.228ENSSMAG00000006709rab9b9877.228Scophthalmus_maximus
ENSG00000123570RAB9B10078.218ENSSDUG00000007575rab9b9978.218Seriola_dumerili
ENSG00000123570RAB9B10078.218ENSSLDG00000009351rab9b9978.218Seriola_lalandi_dorsalis
ENSG00000123570RAB9B10098.507ENSSARG00000006891RAB9B10098.507Sorex_araneus
ENSG00000123570RAB9B10094.030ENSSPUG00000017531RAB9B10094.030Sphenodon_punctatus
ENSG00000123570RAB9B10075.743ENSSPAG00000009806rab9b9275.743Stegastes_partitus
ENSG00000123570RAB9B10099.005ENSSSCG00000032672RAB9B10099.005Sus_scrofa
ENSG00000123570RAB9B10095.025ENSTGUG00000006516RAB9B10095.025Taeniopygia_guttata
ENSG00000123570RAB9B10099.502ENSTBEG00000006468RAB9B10099.502Tupaia_belangeri
ENSG00000123570RAB9B10099.502ENSTTRG00000003956RAB9B10099.502Tursiops_truncatus
ENSG00000123570RAB9B10099.502ENSUAMG00000018451RAB9B10099.502Ursus_americanus
ENSG00000123570RAB9B10099.502ENSUMAG00000001213RAB9B10099.502Ursus_maritimus
ENSG00000123570RAB9B10099.502ENSVVUG00000001381RAB9B10099.502Vulpes_vulpes
ENSG00000123570RAB9B10085.075ENSXETG00000018133rab9b10085.075Xenopus_tropicalis
ENSG00000123570RAB9B10075.248ENSXCOG00000009094rab9b10075.248Xiphophorus_couchianus
ENSG00000123570RAB9B9876.263ENSXMAG00000019499rab9b9676.263Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003924GTPase activity21873635.IBAFunction
GO:0005515protein binding19490898.20048159.IPIFunction
GO:0005525GTP binding-IEAFunction
GO:0005829cytosol-IEAComponent
GO:0005886plasma membrane-TASComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0019003GDP binding20937701.IDAFunction
GO:0030667secretory granule membrane-TASComponent
GO:0030670phagocytic vesicle membrane-IEAComponent
GO:0032482Rab protein signal transduction21873635.IBAProcess
GO:0042147retrograde transport, endosome to Golgi21873635.IBAProcess
GO:0042802identical protein binding-IEAFunction
GO:0043312neutrophil degranulation-TASProcess
GO:0045335phagocytic vesicle21255211.IDAComponent
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