EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
28803425Frameshift Mutations in Repeat Sequences of ANK3, HACD4, TCP10L, TP53BP1, MFN1, LCMT2, RNMT, TRMT6, METTL8 and METTL16 Genes in Colon Cancers.Pathol Oncol Res2018 JulYeon SYdoi: 10.1007/s12253-017-0287-2
18434905The lectin-like domain of tumor necrosis factor-alpha improves alveolar fluid balance in injured isolated rabbit lungs.Crit Care Med2008 MayVadasz Idoi: 10.1097/CCM.0b013e31816f485e.
28551094A synthetic peptide blocking TRPV1 activation inhibits UV-induced skin responses.J Dermatol Sci2017 OctKang SMdoi: 10.1016/j.jdermsci.2017.05.009
31188562AlkB Homologue 1 Demethylates N3-Methylcytidine in mRNA of Mammals.ACS Chem Biol2019 Jul 19Ma CJdoi: 10.1021/acschembio.8b01001

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr2171339278Missense_MutationNAS171F0.05
BLCAchr2171360458Missense_MutationNAE67Q0.55
BLCAchr2171330691Missense_Mutationrs142842112S243L0.11
CESCchr21713240753'UTRnovel0.13
CESCchr2171339483Missense_MutationnovelD103H0.19
CESCchr2171326087IntronNA0.25
CESCchr2171330625Missense_MutationnovelP265H0.36
CESCchr2171339381Missense_MutationnovelA137T0.3
CESCchr21713258673'UTRnovel0.1
CESCchr2171360512Missense_MutationNAD49H0.3
CHOLchr2171331862Missense_MutationnovelS221Y0.38
CHOLchr2171326128Intronnovel0.25
COADchr21713240533'UTRnovel0.35
COADchr21713241153'UTRnovel0.38
COADchr2171331820Missense_MutationnovelA235V0.26
COADchr2171392159SilentNAI9I0.38
COADchr21713240793'UTRnovel0.31
COADchr21713241963'UTRnovel0.04
COADchr2171339504Missense_MutationNAH96N0.15
COADchr2171339430Missense_MutationnovelK120N0.17
GBMchr2171325905Missense_MutationNAT288A0.17
HNSCchr2171330644Missense_MutationnovelD259N0.06
HNSCchr2171330682Missense_Mutationrs768040586R246K0.53
HNSCchr2171330650Missense_Mutationrs772797511V257I0.21
KICHchr21713258593'UTRnovel0.71
KIRPchr21714347905'Flanknovel0.24
KIRPchr2171339351Missense_MutationNAP147S0.23
KIRPchr2171339352SilentNAC146C0.23
LIHCchr21713240453'UTRnovel0.21
LIHCchr2171326074Intronnovel0.62
LUADchr2171339466SilentnovelL108L0.13
LUADchr2171339343SilentNAV149V0.13
LUSCchr2171339183Splice_SiteNAX202_splice0.19
LUSCchr2171360466Missense_Mutationrs563180068K64R0.41
LUSCchr2171360458Missense_MutationNAE67Q0.18
OVchr2171360499Missense_MutationnovelW53L0.14
OVchr2171339402In_Frame_DelNAS129del0.28
SARCchr21713921875'UTRnovel0.84
SKCMchr2171360438Silentrs373304784V73V0.1
SKCMchr2171339456Missense_MutationNAP112S0.31
SKCMchr2171339307In_Frame_DelnovelE152_G161del0.33
SKCMchr2171330619Missense_Mutationrs769171322P267L0.3
SKCMchr2171339257Missense_MutationNAS178F0.38
SKCMchr2171339488Missense_MutationNAF101S0.17
STADchr2171330598Missense_MutationnovelI274T0.23
STADchr2171331825SilentNAS233S0.38
STADchr2171360433Missense_MutationNAL75P0.37
STADchr2171339329Frame_Shift_DelnovelN154Ifs*230.34
THCAchr2171339252Frame_Shift_DelnovelF173Nfs*220.03
UCECchr2171331855Missense_MutationnovelE223D0.5
UCECchr21713243073'UTRnovel0.09
UCECchr2171326087IntronNA0.45
UCECchr2171326054IntronNA0.38
UCECchr21713243213'UTRnovel0.04
UCECchr2171339384Missense_MutationnovelS136G0.08
UCECchr21713258853'UTRnovel0.32
UCECchr2171339240Frame_Shift_InsnovelG184Rfs*110.09
UCECchr2171326108Intronnovel0.36
UCECchr2171339247Missense_MutationNAH181Q0.2
UCECchr21713240143'UTRnovel0.27
UCECchr2171337492Missense_MutationnovelG206E0.33
UCECchr21713243553'UTRnovel0.3
UCECchr2171326039Intronnovel0.24
UCECchr2171339216Missense_MutationnovelP192S0.41
UCECchr21713243213'UTRnovel0.06
UCECchr21713258533'UTRnovel0.16
UCECchr2171339480Missense_Mutationrs780873428R104C0.26
UCECchr2171326124Intronnovel0.26
UCECchr2171392198Splice_SiteNA0.36
UCECchr21713258603'UTRNA0.22
UCECchr2171360493Nonsense_MutationnovelK55Ifs*80.04
UCECchr2171360443Nonsense_Mutationrs779685244R72*0.45
UCECchr2171339419Nonsense_MutationnovelK124Sfs*60.04
UCECchr2171339240Nonsense_MutationnovelG184*0.42
UCECchr21713241013'UTRnovel0.38

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
PAADAMP0.06520.1091
PAADDEL0.02720.2014

Survival Analysis
CancerP-value Q-value
THYM0.012

Kaplan-Meier Survival Analysis

ACC0.00022

Kaplan-Meier Survival Analysis

ESCA0.034

Kaplan-Meier Survival Analysis

KIRP0.0085

Kaplan-Meier Survival Analysis

COAD0.044

Kaplan-Meier Survival Analysis

PAAD0.024

Kaplan-Meier Survival Analysis

BLCA0.0065

Kaplan-Meier Survival Analysis

KICH0.037

Kaplan-Meier Survival Analysis

UCEC0.0015

Kaplan-Meier Survival Analysis

LIHC0.0015

Kaplan-Meier Survival Analysis

LGG0.0001

Kaplan-Meier Survival Analysis

THCA0.0009

Kaplan-Meier Survival Analysis

LUAD0.0035

Kaplan-Meier Survival Analysis

UVM0.038

Kaplan-Meier Survival Analysis

OV0.02

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000123600 (Gene tree)
Gene ID
79828
Gene Symbol
METTL8
Alias
TIP
Full Name
Methyltransferase Like 8
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
117,401 bases
Position
chr2:171,317,402-171,434,802
Accession
25856
RBP type
non-canonical RBP
Summary
METTL8 (Methyltransferase Like 8) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include methyltransferase activity and histone acetyltransferase activity. An important paralog of this gene is METTL2A.
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000462821METTL8-211623--- (aa)--
ENST00000392599METTL8-202828-ENSP00000376377226 (aa)-B5ME25
ENST00000638989METTL8-218876-ENSP00000492427291 (aa)-Q9H825
ENST00000438609METTL8-204981-ENSP00000407180215 (aa)-H7C2P8
ENST00000442541METTL8-205563-ENSP0000041194283 (aa)-C9J3F1
ENST00000483284METTL8-2161880--- (aa)--
ENST00000375258METTL8-2018203-ENSP00000364407379 (aa)-E7ETE0
ENST00000447486METTL8-2072246-ENSP00000409025241 (aa)-Q9H825
ENST00000477130METTL8-215445--- (aa)--
ENST00000464491METTL8-213744--- (aa)--
ENST00000460188METTL8-209622NR_135568-- (aa)--
ENST00000470773METTL8-214575--- (aa)--
ENST00000640734METTL8-219726-ENSP00000491656241 (aa)-Q9H825
ENST00000463392METTL8-212697--- (aa)--
ENST00000442778METTL8-206578-ENSP00000404646153 (aa)-C9JE69
ENST00000460539METTL8-210677--- (aa)--
ENST00000453846METTL8-208558-ENSP00000411589105 (aa)-C9J6U8
ENST00000612742METTL8-2178132XM_011511875ENSP00000480056407 (aa)XP_011510177B3KW44
ENST00000392604METTL8-2031697-ENSP00000376382291 (aa)-Q9H825
Gene Model
Click here to download ENSG00000123600's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000123600's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005634nucleus-IEAComponent
GO:0005737cytoplasm-IEAComponent
GO:0030488tRNA methylation-IEAProcess
GO:0052735tRNA (cytosine-3-)-methyltransferase activity21873635.IBAFunction
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