EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
21360563hZIP1 zinc transporter down-regulation in prostate cancer involves the overexpression of ras responsive element binding protein-1 (RREB-1).Prostate2011 Oct 1Zou Jdoi: 10.1002/pros.21368
19802870Ras responsive element binding protein-1 (RREB-1) down-regulates hZIP1 expression in prostate cancer cells.Prostate2010 Feb 15Milon BCdoi: 10.1002/pros.21063.
21703425RREB1 transcription factor splice variants in urologic cancer.Am J Pathol2011 JulNitz MDdoi: 10.1016/j.ajpath.2011.03.038.

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr67229273Nonsense_MutationNAQ392*0.2
BLCAchr67248723Missense_Mutationrs767996104N1607D0.23
BLCAchr67231243In_Frame_DelnovelL1052_L1065del0.08
BLCAchr67181948Missense_MutationnovelD13H0.27
BLCAchr67229294Nonsense_MutationNAQ399*0.29
BLCAchr67230160SilentnovelI687I0.34
BLCAchr67247142Missense_MutationnovelK1509N0.12
BLCAchr67182072Missense_MutationNAR54K0.62
BLCAchr67231197Missense_MutationnovelS1033L0.11
BLCAchr67248593SilentnovelQ1563Q0.14
BLCAchr67230169SilentNAL690L0.32
BLCAchr67229273Nonsense_MutationNAQ392*0.19
BLCAchr67231171SilentNAV1024V0.26
BLCAchr67210822SilentNAE148E0.28
BLCAchr67231857Missense_MutationnovelR1253L0.5
BLCAchr67231726Silentrs765867404A1209A0.33
BLCAchr67229303Nonsense_MutationnovelQ402*0.32
BLCAchr67229303Nonsense_MutationnovelQ402*0.13
BLCAchr67230397SilentnovelR766R0.41
BLCAchr67230255Missense_MutationnovelR719H0.28
BLCAchr67229486Frame_Shift_DelnovelA464Sfs*90.79
BRCAchr67189206SilentNAG103G0.56
BRCAchr67248593Missense_MutationNAQ1563H0.17
BRCAchr67229052Missense_MutationnovelC318F0.13
BRCAchr67248772Missense_MutationnovelA1623G0.27
BRCAchr67229735Missense_MutationnovelP546S0.19
BRCAchr67247122Missense_MutationnovelV1503M0.16
BRCAchr67211603Missense_MutationNAE201K0.34
BRCAchr67189256Missense_MutationNAS120F0.35
BRCAchr67230187Missense_MutationnovelE696D0.1
BRCAchr67248538Missense_MutationnovelC1545S0.09
BRCAchr67182028SilentnovelG39G0.24
BRCAchr67226620Silentrs780237679T287T0.25
BRCAchr67247108Missense_MutationnovelD1498G0.3
BRCAchr67211696Missense_MutationNAD232N0.19
CESCchr67230857SilentnovelL920L0.27
CESCchr67230862Missense_MutationNAS921R0.17
CESCchr67246665SilentnovelG1350G0.45
CESCchr67182019Missense_MutationNAS36R0.42
CESCchr672493253'UTRnovel0.36
CESCchr67229519SilentNAL474L0.27
CESCchr67189256Missense_MutationNAS120C0.43
CHOLchr67248925Missense_MutationnovelL1674R0.5
CHOLchr67189309Missense_MutationNAG138W0.5
COADchr67210871Missense_MutationnovelR165C0.05
COADchr67229006Missense_MutationnovelE303K0.12
COADchr67246423Splice_SitenovelX1270_splice0.22
COADchr67240466Intronrs7581365170.45
COADchr67247047Missense_MutationNAE1478K0.35
COADchr67231623Missense_MutationNAS1175N0.18
COADchr67231683Missense_Mutationrs745990582P1195L0.32
COADchr67230982Missense_MutationNAE961D0.26
COADchr67181800Intronnovel0.46
COADchr67187518Missense_MutationnovelR86C0.21
COADchr67229024Missense_MutationNAC309R0.28
COADchr67229646Missense_Mutationrs751013989R516Q0.17
COADchr67230152Missense_MutationNAA685T0.28
COADchr67230189Missense_MutationNAR697Q0.33
DLBCchr67229992SilentnovelG631G0.61
ESCAchr67230047Nonsense_MutationnovelQ650*0.57
ESCAchr672499623'UTRnovel0.31
ESCAchr67181763Intronnovel0.38
ESCAchr672492133'UTRnovel0.13
GBMchr67229626SilentnovelP509P0.09
GBMchr67231698Missense_MutationNAA1200V0.18
GBMchr67229018Missense_MutationNAR307W0.54
GBMchr67189227SilentnovelS110S0.23
GBMchr67230245Missense_MutationnovelR716W0.24
GBMchr67230777Missense_Mutationrs375275893A893V0.21
GBMchr67231032Missense_MutationnovelS978Y0.26
GBMchr67247086Missense_MutationnovelD1491N0.27
GBMchr67226552Missense_MutationnovelA265P0.04
GBMchr67229009Missense_MutationnovelT304A0.25
GBMchr67226652Missense_MutationnovelS298Y0.44
GBMchr67230457Silentrs750780730G786G0.79
HNSCchr67230004SilentnovelT635T0.15
HNSCchr67229130Missense_MutationnovelG344D0.37
HNSCchr67229536Silentrs760414247S479S0.11
HNSCchr67230674Missense_MutationnovelL859F0.42
HNSCchr67231879SilentnovelS1260S0.6
HNSCchr67231880SilentNAL1261L0.59
HNSCchr67181747Intronnovel0.38
HNSCchr67230331SilentnovelL744L0.32
HNSCchr67230988SilentnovelA963A0.76
HNSCchr67229340Missense_MutationnovelP414L0.33
HNSCchr67210816Frame_Shift_DelnovelE148Sfs*110.24
HNSCchr67229903Missense_MutationnovelI602V0.28zf-C2H2
HNSCchr67229091Missense_MutationnovelL331R0.5
KICHchr67231395Missense_Mutationrs376220493T1099M0.38
KIRCchr67230081Missense_MutationNAH661R0.43
KIRCchr67211765Intronnovel0.29
KIRCchr67231160Missense_MutationNAS1021T0.22
KIRCchr67230129Missense_MutationNAD677V0.2
KIRCchr67229147Missense_MutationNAA350T0.16
KIRCchr67231033SilentNAS978S0.41
KIRPchr67248961Frame_Shift_DelnovelE1687T0.38
KIRPchr67189316Missense_MutationnovelM140T0.29
LAMLchr67230358SilentNAT753T0.33
LAMLchr67240595Intronnovel0.34
LGGchr67230777Missense_Mutationrs375275893A893V0.07
LGGchr67181755Intronnovel0.21
LGGchr67240473IntronNA0.27
LGGchr67240582Intronnovel0.54
LGGchr67230289SilentNAI730I0.44
LGGchr67231249Silentrs146203523P1050P0.34
LGGchr67229595Missense_MutationNAA499V0.16
LGGchr67231806Missense_Mutationrs374868150R1236Q0.35
LIHCchr67231302Missense_MutationnovelI1068T0.74
LIHCchr67181843Intronnovel0.3
LIHCchr67231204SilentNAL1035L0.27
LIHCchr67230175SilentnovelT692T0.48
LUADchr67231300Silentrs756143736S1067S0.1
LUADchr67230748SilentNAS883S0.18
LUADchr67248796Missense_MutationnovelH1631R0.34
LUADchr67210904Missense_MutationNAH176D0.11
LUADchr67230853SilentNAS918S0.54
LUADchr67229259Missense_MutationnovelD387G0.91
LUADchr67229994Missense_MutationnovelG632V0.46
LUADchr671818995'UTRnovel0.32
LUADchr67230065Missense_MutationNAG656R0.14
LUADchr67240501Intronnovel0.3
LUADchr67210819Missense_MutationnovelH147Q0.42
LUADchr67229950Missense_MutationnovelE617D0.49
LUADchr67230499SilentnovelA800A0.18
LUADchr67231197Missense_MutationnovelS1033L0.15
LUADchr67230896Nonsense_MutationnovelE933*0.31
LUADchr67229582Missense_MutationNAA495S0.05
LUADchr67231584Missense_Mutationrs201015406R1162L0.23
LUADchr67181793Intronnovel0.51
LUADchr67210877Nonsense_MutationnovelR167*0.06
LUADchr67229116SilentNAV339V0.18
LUADchr67231754Missense_MutationnovelS1219C0.31
LUADchr67229906Nonsense_MutationNAE603*0.22
LUADchr67230320Missense_MutationNAA741P0.31
LUADchr67229384Missense_MutationnovelA429S0.13
LUADchr67229381Missense_MutationnovelP428A0.15
LUADchr67229666Missense_MutationnovelT523S0.26
LUADchr67229803Silentrs770296374G568G0.4
LUADchr67231021SilentNAA974A0.3
LUSCchr67247174Missense_MutationnovelR1520Q0.1
LUSCchr67230758Missense_MutationnovelE887K0.32
LUSCchr67231234SilentnovelL1045L0.3
LUSCchr67231847Missense_MutationNAH1250Y0.39
LUSCchr67248685Missense_MutationnovelN1594S0.5
LUSCchr67229649Missense_MutationNAT517M0.21
LUSCchr67211573Missense_MutationnovelM191V0.22
LUSCchr67230965Missense_MutationNAA956S0.41
LUSCchr67229861Missense_MutationNAG588C0.55zf-C2H2
LUSCchr67231161Missense_MutationNAS1021L0.26
LUSCchr67246994Missense_MutationnovelG1460V0.57
LUSCchr67181860Intronnovel0.28
LUSCchr67231588Silentrs200032827P1163P0.55
LUSCchr67231683Missense_Mutationrs745990582P1195L0.25
LUSCchr67247210Missense_MutationnovelR1532L0.32
LUSCchr67247145Missense_MutationNAR1510S0.46
LUSCchr67248814Missense_MutationnovelT1637K0.48
LUSCchr67247121Silentrs200867216S1502S0.38
LUSCchr67229846Frame_Shift_InsnovelA584Gfs*80.15zf-C2H2
OVchr67231717Missense_MutationnovelD1206E0.1
OVchr67226583Missense_MutationNAP275H0.25
OVchr67230258Missense_MutationnovelK720R0.04
OVchr67230259Frame_Shift_InsnovelK721Rfs*200.04
OVchr67230700Silentrs769736395N867N0.07
OVchr67230957Frame_Shift_InsnovelS954Vfs*100.06
OVchr67230607SilentNAA836A0.33
OVchr67226493Missense_MutationnovelR245L0.13
OVchr67181936Frame_Shift_DelnovelL9*0.07
OVchr67211717Splice_Regionnovel0.1
OVchr67240482IntronNA0.33
OVchr67182064SilentNAR51R0.15
OVchr67182065Missense_MutationnovelI52V0.13
OVchr67230444Missense_MutationNAG782V0.12
OVchr67226575Missense_MutationnovelQ272H0.03
OVchr67248519Missense_MutationNAP1539A0.22
OVchr67230151SilentNAA684A0.4
OVchr67240448Intronnovel0.16
OVchr67229157Missense_MutationnovelL353P0.12
OVchr67231039SilentNAP980P0.28
PAADchr67229035Missense_MutationnovelE312D0.05
PAADchr67229036Nonsense_MutationnovelQ313*0.06
PAADchr67230337Frame_Shift_DelnovelD746Efs*1670.57
PAADchr67246741Missense_MutationNAE1376K0.2
PAADchr67210877Nonsense_MutationnovelR167*0.17
PAADchr67229362Silentrs140980354G421G0.21
PAADchr67229646Missense_MutationnovelR516L0.05
PAADchr67230174Missense_Mutationrs756773469T692M0.15
PAADchr67231793SilentnovelL1232L0.22
PAADchr67247085SilentnovelD1490D0.21
PAADchr67230962Missense_Mutationrs754945001E955K0.16
PAADchr67226595Frame_Shift_InsnovelG280Vfs*60.05
PAADchr67229054Frame_Shift_InsnovelC321Hfs*30.15
PAADchr67231555In_Frame_DelnovelG1154_R1160del0.04
PAADchr67229237Missense_Mutationrs747673605A380T0.19
PRADchr67230378Missense_MutationNAE760G0.06
PRADchr67231174Frame_Shift_DelnovelL1029Efs*610.11
PRADchr67229826Missense_Mutationrs745668051R576Q0.29
PRADchr67240457Intronnovel0.18
PRADchr67229070Missense_Mutationrs756205550A324V0.43
PRADchr67229845SilentnovelP582P0.43
READchr67247168Missense_MutationnovelN1518S0.05
READchr67231068Missense_MutationNAE990V0.13
READchr67211795Intronnovel0.31
READchr67231309Missense_MutationNAQ1070H0.33
SARCchr67247083Missense_Mutationrs776759831D1490N0.83
SARCchr67230621Missense_Mutationrs778172996A841V0.41
SKCMchr67210893Missense_MutationNAR172K0.17
SKCMchr67229294Nonsense_MutationNAQ399*0.69
SKCMchr67229700Missense_MutationNAS534F0.29
SKCMchr67229543Missense_MutationNAP482S0.81
SKCMchr67231205SilentnovelL1036L0.13
SKCMchr67248587Silentrs374502214I1561I0.12
SKCMchr67230395Missense_MutationNAR766C0.32
SKCMchr67247035Missense_Mutationrs201769527P1474S0.42
SKCMchr67230132Missense_MutationNAY678S0.11
SKCMchr67230807Missense_MutationNAS903L0.28
SKCMchr67230220SilentNAP707P0.52
SKCMchr67229911SilentNAA604A0.31
SKCMchr67210859Missense_MutationNAS161P0.11
SKCMchr67230616Silentrs751045274A839A0.21
SKCMchr67231399SilentNAA1100A0.3
SKCMchr67231642SilentNAI1181I0.2
SKCMchr67181925Missense_Mutationrs745441379S5L0.23
SKCMchr67229194SilentNAA365A0.76
SKCMchr67230892Silentrs182302012S931S0.29
SKCMchr67229543Missense_MutationNAP482S0.2
SKCMchr67229311Silentrs142150270P404P0.24
SKCMchr67229273Nonsense_MutationNAQ392*0.43
SKCMchr67231139SilentNAL1014L0.27
SKCMchr67247040Silentrs531724612S1475S0.25
SKCMchr67230853SilentNAS918S0.34
SKCMchr67230150Missense_MutationNAA684V0.3
SKCMchr67230151SilentNAA684A0.3
SKCMchr67230395Missense_MutationNAR766C0.26
SKCMchr67229167Silentrs139799223D356D0.14
SKCMchr67231669SilentNAT1190T0.29
SKCMchr67230872SilentNAL925L0.31
SKCMchr67230916SilentNAI939I0.16
SKCMchr67231419Missense_Mutationrs368515443S1107F0.34
SKCMchr671819095'UTRnovel0.14
SKCMchr67240590IntronNA0.47
SKCMchr67230720Missense_Mutationrs780527620P874L0.61
SKCMchr67229380Silentrs200496428L427L0.19
SKCMchr67231312SilentnovelI1071I0.08
SKCMchr67210857Missense_MutationNAP160L0.34
SKCMchr67230651Missense_Mutationrs754554711A851V0.4
SKCMchr67231089Missense_Mutationrs370598103P997L0.35
SKCMchr67230738Missense_MutationNAP880L0.05
STADchr67230369Missense_MutationNAL757P0.19
STADchr67210917Frame_Shift_InsnovelE181Rfs*90.4
STADchr67189204Missense_Mutationrs201588284G103R0.15
STADchr67181917Silentrs149124719T2T0.17
STADchr67231844Frame_Shift_DelnovelH1250Tfs*360.12
STADchr67231642SilentNAI1181I0.17
STADchr67226522Missense_Mutationrs138181401A255T0.11
STADchr67229650Silentrs756686713T517T0.05
STADchr67229018Missense_MutationNAR307W0.19
STADchr67229397Missense_MutationnovelS433I0.43
STADchr67231590Missense_Mutationrs371044808R1164H0.38
STADchr67247082SilentnovelS1489S0.12
STADchr67229032Silentrs751985080S311S0.3
STADchr67229017SilentNAL306L0.26
STADchr67248539SilentNAC1545C0.17
STADchr67181986Missense_MutationNAM25I0.16
STADchr67240579Intronnovel0.2
STADchr67230152Missense_MutationNAA685T0.48
STADchr67247200Missense_MutationNAR1529W0.29
STADchr67230918Missense_MutationNAP940L0.19
STADchr67231590Missense_Mutationrs371044808R1164H0.32
STADchr67246677SilentNAD1354D0.47
STADchr67248691Missense_MutationNAA1596V0.16
STADchr67230376SilentnovelG759G0.41
STADchr67230433Silentrs769663945R778R0.17
STADchr67226654Missense_MutationNAQ299E0.07
STADchr67229657Missense_MutationNAA520T0.06
STADchr67231355Missense_Mutationrs763437605V1086M0.25
STADchr67211681Missense_MutationNAM227V0.27
STADchr67229165Missense_MutationNAD356N0.3
STADchr67230075Missense_MutationNAR659H0.41
STADchr67210934Missense_MutationNAA186T0.06
STADchr67226524Silentrs759101444A255A0.16
STADchr67231739Missense_Mutationrs146641651D1214N0.22
STADchr67230255Missense_MutationnovelR719H0.08
STADchr67247052SilentNAS1479S0.24
THCAchr67231705SilentNAD1202D0.09
THYMchr67210919Nonsense_MutationnovelE181*0.16
UCECchr67211584Silentrs144915615D194D0.49
UCECchr67230325Silentrs756374152A742A0.32
UCECchr67211730Intronnovel0.39
UCECchr67246578Silentrs770076990P1321P0.44
UCECchr67181797Intronnovel0.48
UCECchr67247176Missense_MutationnovelF1521L0.4
UCECchr67248741Missense_MutationnovelA1613T0.28
UCECchr672491153'UTRnovel0.3
UCECchr67246532Missense_MutationnovelA1306V0.31
UCECchr672497993'UTRrs5706957090.3
UCECchr67247061Missense_MutationNAE1482D0.29
UCECchr67229120Missense_MutationnovelA341T0.38
UCECchr67230057Missense_MutationnovelA653V0.38
UCECchr67248679Missense_Mutationrs778865424S1592N0.48
UCECchr67246656SilentnovelD1347D0.53
UCECchr67229033Missense_Mutationrs147528961E312K0.23
UCECchr67230278Missense_MutationnovelR727C0.4
UCECchr67246679Missense_MutationNAA1355V0.48
UCECchr67248869SilentnovelA1655A0.31
UCECchr671767465'UTRnovel0.27
UCECchr67246639Missense_MutationNAE1342K0.38
UCECchr67229384Missense_Mutationrs368606725A429T0.45
UCECchr67229070Missense_Mutationrs756205550A324V0.13
UCECchr67211828Intronnovel0.13
UCECchr67229121Missense_MutationNAA341V0.31
UCECchr67187493SilentnovelT77T0.45
UCECchr67230809Nonsense_MutationnovelQ904*0.48
UCECchr67246628Missense_MutationnovelE1338A0.25
UCECchr67229168Missense_Mutationrs370083804A357T0.14
UCECchr67210844Missense_MutationnovelA156S0.23
UCECchr67247121Silentrs200867216S1502S0.25
UCECchr67248839SilentnovelG1645G0.25
UCECchr67182063Missense_MutationnovelR51Q0.16
UCECchr67247082SilentnovelS1489S0.51
UCECchr67231590Missense_Mutationrs371044808R1164H0.38
UCECchr67229532Missense_Mutationrs772060078A478V0.35
UCECchr67229494Silentrs138539147I465I0.45
UCECchr67229519Missense_MutationnovelL474M0.43
UCECchr67248641SilentnovelE1579E0.5
UCECchr67229929Missense_MutationnovelM610I0.39
UCECchr67231697Missense_MutationnovelA1200T0.08
UCECchr67248508Splice_Regionnovel0.34
UCECchr67181916Missense_Mutationrs755998409T2M0.16
UCECchr67230737Missense_MutationnovelP880T0.39
UCECchr67240466Intronrs7581365170.6
UCECchr67229921Silentrs758121441L608L0.33
UCECchr67210871Missense_MutationnovelR165C0.28
UCECchr67231679Missense_MutationNAS1194G0.54
UCECchr67230404Missense_MutationNAR769C0.29
UCECchr67246578Silentrs770076990P1321P0.44
UCECchr672493573'UTRnovel0.24
UCECchr67230940SilentnovelD947D0.41
UCECchr67181976Missense_MutationnovelS22L0.09
UCECchr67231642SilentNAI1181I0.29
UCECchr67229005Silentrs775130340C302C0.27
UCECchr67231624Silentrs760574142S1175S0.3
UCECchr67248644SilentnovelR1580R0.28
UCECchr67246559Missense_Mutationrs375377458T1315M0.42
UCECchr67226513Missense_MutationnovelR252C0.05
UCECchr67230625SilentnovelS842S0.54
UCECchr67230082Silentrs755607248H661H0.2
UCECchr67230905Missense_Mutationrs768531355D936N0.42
UCECchr672493163'UTRnovel0.47
UCECchr67230240Missense_MutationnovelC714Y0.69
UCECchr67230137Missense_MutationNAA680T0.57
UCECchr67181993Missense_MutationnovelG28W0.46
UCECchr67182012Missense_MutationnovelG34A0.41
UCECchr67226514Missense_Mutationrs145465865R252H0.06
UCECchr67229174Missense_MutationnovelD359Y0.37
UCECchr67230171Missense_Mutationrs115829227R691H0.24
UCECchr67246499Missense_Mutationrs748359571P1295L0.26
UCECchr672492813'UTRnovel0.28
UCECchr672499183'UTRrs5310058840.09
UCECchr67226524Silentrs759101444A255A0.28
UCECchr67229230SilentnovelP377P0.26
UCECchr67230817SilentNAG906G0.32
UCECchr67229343Missense_MutationnovelF415S0.61
UCECchr67230238SilentnovelN713N0.34
UCECchr67248843Missense_MutationnovelG1647S0.22
UCECchr67246897Missense_MutationnovelA1428T0.6
UCECchr672491053'UTRnovel0.44
UCECchr67181929Silentrs779379387P6P0.42
UCECchr67230961Silentrs147699375S954S0.56
UCECchr67248639Missense_MutationNAE1579K0.22
UCECchr67231436Missense_MutationNAT1113A0.25
UCECchr67248728SilentnovelA1608A0.5
UCECchr67230003Missense_MutationnovelT635M0.33
UCECchr67229446SilentnovelQ449Q0.51
UCECchr67187438Missense_Mutationrs558705748T59M0.56
UCECchr67229494Silentrs138539147I465I0.45
UCECchr672489843'UTRnovel0.43
UCECchr67210906Silentrs746694845H176H0.52
UCECchr67231840Silentrs745482753T1247T0.3
UCSchr67246948Frame_Shift_DelnovelE1447Rfs*810.91
UCSchr67240457Intronnovel0.08

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCDEL0.18890.19267
CESCDEL0.11860.046699
HNSCDEL0.12450.0011062
LIHCAMP0.37571.013e-05
LUSCDEL0.20360.00029978
PAADDEL0.29890.00010152
PRADDEL0.07720.059223
SARCDEL0.2490.014376
SKCMAMP0.53416.548e-09
UVMAMP0.552.0409e-06

Survival Analysis
CancerP-value Q-value
KIRC0.0015

Kaplan-Meier Survival Analysis

STAD0.0021

Kaplan-Meier Survival Analysis

MESO0.032

Kaplan-Meier Survival Analysis

HNSC0.0075

Kaplan-Meier Survival Analysis

SKCM0.00099

Kaplan-Meier Survival Analysis

KIRP0.0023

Kaplan-Meier Survival Analysis

READ0.035

Kaplan-Meier Survival Analysis

LAML0.0015

Kaplan-Meier Survival Analysis

GBM0.04

Kaplan-Meier Survival Analysis

LGG0.00011

Kaplan-Meier Survival Analysis

UVM0.00011

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000124782 (Gene tree)
Gene ID
6239
Gene Symbol
RREB1
Alias
HNT
Full Name
ras responsive element binding protein 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
144,384 bases
Position
chr6:7,107,597-7,251,980
Accession
10449
RBP type
canonical RBP
Summary
The protein encoded by this gene is a zinc finger transcription factor that binds to RAS-responsive elements (RREs) of gene promoters. It has been shown that the calcitonin gene promoter contains an RRE and that the encoded protein binds there and increases expression of calcitonin, which may be involved in Ras/Raf-mediated cell differentiation. Multiple transcript variants encoding several different isoforms have been found for this gene. [provided by RefSeq, Dec 2009]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000369270zf-C2H2PF00096.265.3e-4014
ENSP00000369270zf-C2H2PF00096.265.3e-4024
ENSP00000369270zf-C2H2PF00096.265.3e-4034
ENSP00000369270zf-C2H2PF00096.265.3e-4044
ENSP00000305560zf-C2H2PF00096.269.5e-3914
ENSP00000305560zf-C2H2PF00096.269.5e-3924
ENSP00000305560zf-C2H2PF00096.269.5e-3934
ENSP00000305560zf-C2H2PF00096.269.5e-3944
ENSP00000369265zf-C2H2PF00096.269.5e-3914
ENSP00000369265zf-C2H2PF00096.269.5e-3924
ENSP00000369265zf-C2H2PF00096.269.5e-3934
ENSP00000369265zf-C2H2PF00096.269.5e-3944
ENSP00000335574zf-C2H2PF00096.267.4e-3515
ENSP00000335574zf-C2H2PF00096.267.4e-3525
ENSP00000335574zf-C2H2PF00096.267.4e-3535
ENSP00000335574zf-C2H2PF00096.267.4e-3545
ENSP00000335574zf-C2H2PF00096.267.4e-3555
ENSP00000419511zf-C2H2PF00096.261.4e-2714
ENSP00000419511zf-C2H2PF00096.261.4e-2724
ENSP00000419511zf-C2H2PF00096.261.4e-2734
ENSP00000419511zf-C2H2PF00096.261.4e-2744
ENSP00000483108zf-C2H2PF00096.263.4e-1514
ENSP00000483108zf-C2H2PF00096.263.4e-1524
ENSP00000483108zf-C2H2PF00096.263.4e-1534
ENSP00000483108zf-C2H2PF00096.263.4e-1544
ENSP00000420299zf-C2H2PF00096.263.5e-1513
ENSP00000420299zf-C2H2PF00096.263.5e-1523
ENSP00000420299zf-C2H2PF00096.263.5e-1533
ENSP00000420519zf-C2H2PF00096.261.9e-1012
ENSP00000420519zf-C2H2PF00096.261.9e-1022
ENSP00000305560zf-metPF12874.78.9e-0811
ENSP00000369265zf-metPF12874.78.9e-0811
ENSP00000420299zf-metPF12874.72.9e-0712
ENSP00000420299zf-metPF12874.72.9e-0722
ENSP00000420519zf-metPF12874.73.7e-0512
ENSP00000420519zf-metPF12874.73.7e-0522
ENSP00000369270zf-metPF12874.70.0001711
ENSP00000483108zf-metPF12874.70.000711

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
28341660The noncoding RNA linc-ADAMTS5 cooperates with RREB1 to protect from intervertebral disc degeneration through inhibiting ADAMTS5 expression.Clin Sci (Lond)2017 May 1Wang Kdoi: 10.1042/CS20160918
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000483150RREB1-2082833-ENSP00000419511778 (aa)-C9JU34
ENST00000379933RREB1-2035826-ENSP000003692651687 (aa)-Q92766
ENST00000379938RREB1-2048778-ENSP000003692701742 (aa)-Q92766
ENST00000471433RREB1-2061021-ENSP00000420299164 (aa)-C9JPJ6
ENST00000334984RREB1-2015789-ENSP000003355741476 (aa)-Q92766
ENST00000491191RREB1-209998-ENSP00000420519136 (aa)-C9JE09
ENST00000611109RREB1-2103563-ENSP00000483108755 (aa)-A0A087X055
ENST00000475946RREB1-2079067--- (aa)--
ENST00000349384RREB1-2027440-ENSP000003055601687 (aa)-Q92766
ENST00000467782RREB1-205243-ENSP000004205714 (aa)-UPI0001B793E2
Gene Model
Click here to download ENSG00000124782's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000124782Parkinson Disease4.356362E-817052657
ENSG00000124782Social Support3.1540000E-005-
ENSG00000124782Platelet Function Tests4.5300000E-006-
ENSG00000124782Platelet Function Tests9.9400000E-006-
ENSG00000124782Adipose Tissue1E-827918534
ENSG00000124782Body Mass Index1E-827918534
ENSG00000124782Waist-Hip Ratio3E-823966867
ENSG00000124782Multiple System Atrophy3E-627629089
ENSG00000124782Glucose3E-722581228
ENSG00000124782Body Mass Index3E-722581228
ENSG00000124782Adipose Tissue6E-927918534
ENSG00000124782Body Mass Index6E-927918534
ENSG00000124782Diabetes Mellitus, Type 21E-924509480
ENSG00000124782Optic Disk2E-828073927
ENSG00000124782Macular Degeneration1E-620385826
ENSG00000124782Adipose Tissue2E-627918534
ENSG00000124782Body Mass Index2E-627918534
ENSG00000124782Adipose Tissue4E-622589738
ENSG00000124782Body Mass Index4E-622589738
ENSG00000124782Adipose Tissue4E-622589738
ENSG00000124782Body Mass Index4E-622589738
ENSG00000124782Multiple Sclerosis3E-621833088
ENSG00000124782Body Mass Index9E-627918534
ENSG00000124782Subcutaneous Fat, Abdominal9E-627918534
ENSG00000124782Optic Disk2E-1028073927
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000124782rs55707467144958GMonocyte count27863252[0.022-0.04] unit increase0.03105644EFO_0005091
ENSG00000124782rs5598649367156526TMonocyte count27863252[0.029-0.057] unit increase0.04291104EFO_0005091
ENSG00000124782rs5799677167157434CReticulocyte count27863252[0.023-0.043] unit increase0.03306844EFO_0007986
ENSG00000124782rs7575789267232156TRed blood cell count27863252[0.023-0.041] unit increase0.03181995EFO_0004305
ENSG00000124782rs1175572467118757AMultiple sclerosis21833088[1.06-1.09]1.08EFO_0003885
ENSG00000124782rs141370067216251GMultiple system atrophy276290891.39EFO_1001050
ENSG00000124782rs1175572467118757GAge-related macular degeneration20385826[1.09-1.14]1.15EFO_0001365
ENSG00000124782rs693126267217284TWaist-hip ratio23966867[0.04-0.08] unit increase0.06EFO_0004343
ENSG00000124782rs271433767240344AFasting blood glucose22581228[0.0071-0.0173] unit decrease0.0122EFO_0004465
ENSG00000124782rs271433767240344AFasting blood glucose (BMI interaction)22581228[-0.00087-0.00141] unit decrease2.68E-04EFO_0004340|EFO_0004465
ENSG00000124782rs937908467231610GHeel bone mineral density28869591[0.024-0.056] unit increase0.0397905EFO_0009270
ENSG00000124782rs937908467231610GHeel bone mineral density28869591[0.031-0.052] unit increase0.0413825EFO_0009270
ENSG00000124782rs937908467231610GHeel bone mineral density28869591[0.027-0.056] unit increase0.0410614EFO_0009270
ENSG00000124782rs7575789267232156TSelf-reported math ability (MTAG)30038396[0.0087-0.0181] unit increase0.0134EFO_0004875
ENSG00000124782rs14728794567223333GEotaxin levels27989323[0.081-0.204] SD units increase0.1428EFO_0008122
ENSG00000124782rs7575789267232156THematocrit27863252[0.025-0.043] unit increase0.03442745EFO_0004348
ENSG00000124782rs128588667140598ALymphocyte counts27863252[0.02-0.038] unit increase0.02893744EFO_0004587
ENSG00000124782rs5598649367156526TMyeloid white cell count27863252[0.029-0.057] unit increase0.04286195EFO_0007988
ENSG00000124782rs5799677167157434CReticulocyte fraction of red cells27863252[0.023-0.043] unit increase0.03274342EFO_0007986
ENSG00000124782rs1130305467138928CWhite blood cell count27863252[0.021-0.038] unit increase0.02959356EFO_0004308
ENSG00000124782rs5799677167157434CHigh light scatter reticulocyte count27863252[0.02-0.039] unit increase0.02934395EFO_0007986
ENSG00000124782rs496029567205563AVertical cup-disc ratio28073927[0.005-0.009] unit increase0.007EFO_0006939
ENSG00000124782rs496029567205563AVertical cup-disc ratio28073927[0.005-0.009] unit increase0.007EFO_0006939
ENSG00000124782rs133457767211518ANeutrophil count27863252[0.017-0.033] unit decrease0.02485225EFO_0004833
ENSG00000124782rs133457767211518ASum basophil neutrophil counts27863252[0.017-0.033] unit decrease0.02474309EFO_0004833|EFO_0005090
ENSG00000124782rs937908467231610?Heel bone mineral density30048462[0.032-0.045] unit increase0.0389254EFO_0009270
ENSG00000124782rs284235267250804?Heel bone mineral density30048462[0.013-0.025] unit increase0.0189983EFO_0009270
ENSG00000124782rs937908467231610GHeel bone mineral density30598549[0.028-0.04] unit increase0.0340199EFO_0009270
ENSG00000124782rs390460067109432?Balding type 130595370EFO_0007825
ENSG00000124782rs271433867250727?Balding type 130595370EFO_0007825
ENSG00000124782rs937908467231610?Type 2 diabetes30595370EFO_0001360
ENSG00000124782rs68746767127843?Lung function (FVC)30595370EFO_0004312
ENSG00000124782rs390460067109432?Waist-hip ratio30595370EFO_0004343
ENSG00000124782rs128588667140598?White blood cell count30595370EFO_0004308
ENSG00000124782rs7575789267232156?Red blood cell count30595370EFO_0004305
ENSG00000124782rs496028967146117?Lung function (FEV1/FVC)30595370EFO_0004713
ENSG00000124782rs133457667211585APulse pressure30224653[0.081-0.149] unit decrease0.1149EFO_0005763
ENSG00000124782rs7605295567213674APulse pressure30578418[0.11-0.21] mmHg increase0.1613EFO_0005763
ENSG00000124782rs937908467231610?Heel bone mineral density30595370EFO_0009270
ENSG00000124782rs937908467231610ABreast cancer29059683[0.028-0.069] unit increase0.0486EFO_0000305
ENSG00000124782rs133457667211585GWaist-to-hip ratio adjusted for BMI (additive genetic model)30778226[0.013-0.021] unit increase0.0171EFO_0007788
ENSG00000124782rs133457667211585GWaist-to-hip ratio adjusted for BMI (additive genetic model)30778226[0.012-0.021] unit increase0.0166EFO_0007788
ENSG00000124782rs133457667211585GWaist-to-hip ratio adjusted for BMI (additive genetic model)30778226[0.015-0.027] unit increase0.0209EFO_0007788
ENSG00000124782rs133457667211585GWaist-to-hip ratio adjusted for BMI (additive genetic model)30778226[0.0079-0.0201] unit increase0.014EFO_0007788
ENSG00000124782rs133457667211585GWaist-to-hip ratio adjusted for BMI (additive genetic model)30778226[0.014-0.026] unit increase0.0202EFO_0007788
ENSG00000124782rs937908467231610GType 2 diabetes29632382[1.06-1.11]1.08EFO_0001360
ENSG00000124782rs937908467231610GType 2 diabetes (adjusted for BMI)29632382[1.07-1.13]1.1EFO_0001360
ENSG00000124782rs937908467231610GType 2 diabetes29632382[1.07-1.13]1.1EFO_0001360
ENSG00000124782rs937908467231610GType 2 diabetes (adjusted for BMI)29632382[1.06-1.12]1.09EFO_0001360
ENSG00000124782rs3574241767247111CType 2 diabetes29632382[1.03-1.06]1.04EFO_0001360
ENSG00000124782rs3574241767247111CType 2 diabetes (adjusted for BMI)29632382[1.02-1.06]1.04EFO_0001360
ENSG00000124782rs3574241767247111CType 2 diabetes29632382(1.02-1.06)1.04EFO_0001360
ENSG00000124782rs3574241767247111CType 2 diabetes (adjusted for BMI)29632382[1.02-1.06]1.04EFO_0001360
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000124782's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000124782RREB15942.982ENSAPEG00000002682-7345.902Amphiprion_percula
ENSG00000124782RREB19780.000ENSAPLG00000004726RREB110063.754Anas_platyrhynchos
ENSG00000124782RREB19774.016ENSACAG00000000520RREB110061.051Anolis_carolinensis
ENSG00000124782RREB110098.529ENSANAG00000029040RREB110094.792Aotus_nancymaae
ENSG00000124782RREB19967.470ENSAMXG00000019028rreb1a9445.559Astyanax_mexicanus
ENSG00000124782RREB17673.600ENSAMXG00000015314rreb1b9643.486Astyanax_mexicanus
ENSG00000124782RREB110098.780ENSCJAG00000021358RREB110095.475Callithrix_jacchus
ENSG00000124782RREB110096.341ENSCAFG00000009527RREB110088.180Canis_familiaris
ENSG00000124782RREB110096.341ENSCAFG00020013260RREB110081.492Canis_lupus_dingo
ENSG00000124782RREB110098.780ENSCCAG00000021905RREB110095.249Cebus_capucinus
ENSG00000124782RREB110099.390ENSCATG00000043662RREB110098.263Cercocebus_atys
ENSG00000124782RREB110099.390ENSCSAG00000007376RREB110096.670Chlorocebus_sabaeus
ENSG00000124782RREB19986.667ENSCPBG00000008709RREB110065.133Chrysemys_picta_bellii
ENSG00000124782RREB110099.390ENSCANG00000032835RREB110096.979Colobus_angolensis_palliatus
ENSG00000124782RREB19157.386ENSCSEG00000018342rreb1a8850.980Cynoglossus_semilaevis
ENSG00000124782RREB19563.910ENSDARG00000063701rreb1a9262.245Danio_rerio
ENSG00000124782RREB110096.341ENSDORG00000006979Rreb19987.793Dipodomys_ordii
ENSG00000124782RREB110096.341ENSEASG00005012054RREB110082.379Equus_asinus_asinus
ENSG00000124782RREB110096.341ENSECAG00000018169RREB19488.713Equus_caballus
ENSG00000124782RREB19886.466ENSFALG00000013231RREB19663.673Ficedula_albicollis
ENSG00000124782RREB110095.588ENSFDAG00000004213RREB19668.487Fukomys_damarensis
ENSG00000124782RREB110084.756ENSGALG00000012799RREB110063.093Gallus_gallus
ENSG00000124782RREB19277.080ENSGAGG00000002213RREB110063.074Gopherus_agassizii
ENSG00000124782RREB110099.486ENSGGOG00000004561RREB110099.169Gorilla_gorilla
ENSG00000124782RREB19362.092ENSLBEG00000013512rreb1a8550.980Labrus_bergylta
ENSG00000124782RREB19977.439ENSLACG00000009283RREB19954.340Latimeria_chalumnae
ENSG00000124782RREB19376.562ENSLOCG00000011702rreb1b9651.724Lepisosteus_oculatus
ENSG00000124782RREB110093.382ENSLAFG00000005300RREB110078.100Loxodonta_africana
ENSG00000124782RREB110099.390ENSMFAG00000000389RREB110098.187Macaca_fascicularis
ENSG00000124782RREB110099.390ENSMMUG00000007852RREB110097.961Macaca_mulatta
ENSG00000124782RREB110099.390ENSMNEG00000038556RREB110098.187Macaca_nemestrina
ENSG00000124782RREB110099.390ENSMLEG00000040965RREB110098.187Mandrillus_leucophaeus
ENSG00000124782RREB18888.966ENSMGAG00000003910RREB110062.829Meleagris_gallopavo
ENSG00000124782RREB110095.244ENSMICG00000003683RREB110091.053Microcebus_murinus
ENSG00000124782RREB110089.706ENSMODG00000009892RREB110070.922Monodelphis_domestica
ENSG00000124782RREB110095.732ENSMPUG00000000558RREB110082.452Mustela_putorius_furo
ENSG00000124782RREB110096.341ENSMLUG00000013153RREB110081.935Myotis_lucifugus
ENSG00000124782RREB110096.341ENSNGAG00000021506Rreb110083.737Nannospalax_galili
ENSG00000124782RREB17472.143ENSNBRG00000016744rreb1a8554.082Neolamprologus_brichardi
ENSG00000124782RREB110099.390ENSNLEG00000011554RREB110099.018Nomascus_leucogenys
ENSG00000124782RREB110088.415ENSMEUG00000015377RREB110072.629Notamacropus_eugenii
ENSG00000124782RREB110090.441ENSOPRG00000001966RREB18877.527Ochotona_princeps
ENSG00000124782RREB110085.403ENSODEG00000007124RREB110077.876Octodon_degus
ENSG00000124782RREB18861.194ENSOMEG00000001389rreb1a6894.118Oryzias_melastigma
ENSG00000124782RREB110095.732ENSOGAG00000025755RREB110081.353Otolemur_garnettii
ENSG00000124782RREB110099.743ENSPPAG00000037017RREB110099.698Pan_paniscus
ENSG00000124782RREB110096.341ENSPPRG00000012144RREB110083.771Panthera_pardus
ENSG00000124782RREB110099.743ENSPTRG00000017697RREB110099.622Pan_troglodytes
ENSG00000124782RREB110099.390ENSPANG00000019553RREB110097.961Papio_anubis
ENSG00000124782RREB19263.934ENSPKIG00000006372rreb1b9153.403Paramormyrops_kingsleyae
ENSG00000124782RREB18890.345ENSPSIG00000006582RREB110063.435Pelodiscus_sinensis
ENSG00000124782RREB110094.118ENSPEMG00000014153Rreb110080.201Peromyscus_maniculatus_bairdii
ENSG00000124782RREB19282.418ENSPCIG00000012644RREB110070.413Phascolarctos_cinereus
ENSG00000124782RREB110099.100ENSPPYG00000016204RREB110097.819Pongo_abelii
ENSG00000124782RREB110096.324ENSPCOG00000014821RREB110091.573Propithecus_coquereli
ENSG00000124782RREB110096.341ENSPVAG00000014081RREB110082.924Pteropus_vampyrus
ENSG00000124782RREB19665.409ENSPNAG00000000486rreb1a8951.600Pygocentrus_nattereri
ENSG00000124782RREB110093.382ENSRNOG00000015701Rreb110079.263Rattus_norvegicus
ENSG00000124782RREB110099.390ENSRROG00000039603RREB110097.508Rhinopithecus_roxellana
ENSG00000124782RREB110098.780ENSSBOG00000025257RREB110094.800Saimiri_boliviensis_boliviensis
ENSG00000124782RREB110088.971ENSSHAG00000005295RREB19183.184Sarcophilus_harrisii
ENSG00000124782RREB18870.470ENSSFOG00015001117rreb1b9348.257Scleropages_formosus
ENSG00000124782RREB18888.276ENSSPUG00000007686RREB110063.300Sphenodon_punctatus
ENSG00000124782RREB110084.756ENSTGUG00000002309RREB110065.530Taeniopygia_guttata
ENSG00000124782RREB110095.122ENSUAMG00000003741RREB110082.864Ursus_americanus
ENSG00000124782RREB110096.341ENSVVUG00000005050RREB19688.444Vulpes_vulpes
ENSG00000124782RREB19681.529ENSXETG00000015435rreb19855.556Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II21873635.IBAProcess
GO:0000122negative regulation of transcription by RNA polymerase II20133935.IMPProcess
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding21873635.IBAFunction
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding8816445.IDAFunction
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding21873635.IBAFunction
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding20133935.IMPFunction
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific-ISAFunction
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific19274049.NASFunction
GO:0001228DNA-binding transcription activator activity, RNA polymerase II-specific21873635.IBAFunction
GO:0001228DNA-binding transcription activator activity, RNA polymerase II-specific8816445.IDAFunction
GO:0001650fibrillar center-IDAComponent
GO:0003700DNA-binding transcription factor activity21873635.IBAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus9305772.TASComponent
GO:0005737cytoplasm9305772.TASComponent
GO:0006355regulation of transcription, DNA-templated9305772.TASProcess
GO:0006366transcription by RNA polymerase II8816445.TASProcess
GO:0007265Ras protein signal transduction8816445.TASProcess
GO:0007275multicellular organism development8816445.TASProcess
GO:0010634positive regulation of epithelial cell migration18394891.IMPProcess
GO:0016604nuclear body9305772.TASComponent
GO:0016607nuclear speck-IDAComponent
GO:0033601positive regulation of mammary gland epithelial cell proliferation18394891.IMPProcess
GO:0045893positive regulation of transcription, DNA-templated9305772.TASProcess
GO:0045944positive regulation of transcription by RNA polymerase II8816445.IDAProcess
GO:0046872metal ion binding-IEAFunction
GO:0070062extracellular exosome19056867.HDAComponent
GO:1900026positive regulation of substrate adhesion-dependent cell spreading18394891.IMPProcess
GO:1903691positive regulation of wound healing, spreading of epidermal cells18394891.IMPProcess
GO:2000394positive regulation of lamellipodium morphogenesis18394891.IMPProcess
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