EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr6	4996236	Missense_Mutation	novel	F248L	0.74	Ribonuc_P_40
BLCA	chr6	4996298	Missense_Mutation	NA	E228K	0.35	Ribonuc_P_40
BLCA	chr6	5003928	Missense_Mutation	rs758028939	H25Q	0.09
BLCA	chr6	5002128	Missense_Mutation	NA	E81K	0.15
BRCA	chr6	4996226	Missense_Mutation	rs147319010	D252N	0.24	Ribonuc_P_40
BRCA	chr6	4996064	Missense_Mutation	NA	F260L	0.21	Ribonuc_P_40
BRCA	chr6	5002227	Missense_Mutation	NA	E48Q	0.14
BRCA	chr6	4999891	Missense_Mutation	NA	L117F	0.74
CESC	chr6	5003937	Silent	novel	F22F	0.15
CESC	chr6	5004008	5'UTR	novel		0.72
COAD	chr6	4996039	Missense_Mutation	NA	P269S	0.19	Ribonuc_P_40
COAD	chr6	4998799	Missense_Mutation	NA	S159Y	0.16	Ribonuc_P_40
COAD	chr6	4995258	Silent	rs536356148	P304P	0.31
COAD	chr6	4995108	Silent	NA	A354A	0.36
COAD	chr6	4996341	Silent	rs775710811	T213T	0.08
COAD	chr6	4995189	Frame_Shift_Ins	NA	*N327Kfs2**	0.32
COAD	chr6	4995190	Frame_Shift_Del	NA	*N327Mfs16**	0.12
COAD	chr6	4995175	Missense_Mutation	rs575359259	R332Q	0.26
ESCA	chr6	4996408	Missense_Mutation	rs765129337	S191L	0.29	Ribonuc_P_40
HNSC	chr6	5004035	5'UTR	novel		0.4
HNSC	chr6	4998726	Nonsense_Mutation	novel	W183*	0.15	Ribonuc_P_40
HNSC	chr6	5004022	5'UTR	novel		0.07
HNSC	chr6	5003971	Missense_Mutation	novel	P11L	0.28
KIRP	chr6	4998724	Missense_Mutation	rs146507302	H184R	1	Ribonuc_P_40
LGG	chr6	5002102	Missense_Mutation	novel	K89N	0.06
LGG	chr6	4996044	Missense_Mutation	novel	P267H	0.36	Ribonuc_P_40
LGG	chr6	4996291	Missense_Mutation	rs558469947	T230M	0.38	Ribonuc_P_40
LIHC	chr6	4996356	Missense_Mutation	NA	K208N	0.39	Ribonuc_P_40
LIHC	chr6	4999812	Frame_Shift_Del	novel	*M142Ifs6**	0.09
LIHC	chr6	4996019	Missense_Mutation	novel	K275N	0.24	Ribonuc_P_40
LUAD	chr6	5002192	Silent	rs537909300	L59L	0.05
LUAD	chr6	4999884	Missense_Mutation	novel	D120Y	0.46
LUAD	chr6	5002226	Missense_Mutation	novel	E48V	0.38
LUAD	chr6	4996324	Missense_Mutation	novel	C219F	0.08	Ribonuc_P_40
LUAD	chr6	5004011	5'UTR	novel		0.09
LUSC	chr6	5004018	5'UTR	rs371159071		0.23
LUSC	chr6	5000573	Silent	novel	L109L	0.24
LUSC	chr6	4996299	Silent	novel	L227L	0.44
LUSC	chr6	4998787	Missense_Mutation	novel	E163V	0.43	Ribonuc_P_40
LUSC	chr6	5000625	Missense_Mutation	novel	C92F	0.33
LUSC	chr6	5003969	Missense_Mutation	NA	R12W	0.34
LUSC	chr6	5004031	5'UTR	novel		0.14
OV	chr6	4998774	Nonsense_Mutation	NA	W167*	0.56	Ribonuc_P_40
OV	chr6	5003901	Silent	rs764040732	Q34Q	0.13
OV	chr6	5002190	Missense_Mutation	novel	V60D	0.1
OV	chr6	4996242	Frame_Shift_Ins	novel	*V247Gfs17**	0.05	Ribonuc_P_40
PAAD	chr6	5003989	Missense_Mutation	novel	R5P	0.06
PAAD	chr6	5000618	Silent	novel	A94A	0.2
READ	chr6	4995176	Nonsense_Mutation	rs771055748	R332*	0.43
SKCM	chr6	4995210	Silent	novel	S320S	0.41
SKCM	chr6	4996243	Missense_Mutation	rs377334812	A246V	0.27	Ribonuc_P_40
SKCM	chr6	4995145	Missense_Mutation	NA	V342G	0.41
SKCM	chr6	4995059	3'UTR	rs372002450		0.35
SKCM	chr6	4996064	Silent	NA	F260F	0.09
SKCM	chr6	4996275	Silent	NA	C235C	0.15
SKCM	chr6	5003915	Missense_Mutation	NA	R30W	0.35
SKCM	chr6	4995232	Missense_Mutation	NA	S313F	0.18
SKCM	chr6	4995059	3'UTR	rs372002450		0.29
SKCM	chr6	4995059	3'UTR	rs372002450		0.36
SKCM	chr6	4995059	3'UTR	rs372002450		0.3
SKCM	chr6	4995080	Nonstop_Mutation	rs759328874	364Kext65	0.26
SKCM	chr6	4996322	Missense_Mutation	rs199844523	P220S	0.27	Ribonuc_P_40
SKCM	chr6	4996248	Silent	rs756138664	L244L	0.3
SKCM	chr6	4995968	Silent	novel	L292L	0.26
STAD	chr6	4995190	Frame_Shift_Del	NA	*N327Mfs16**	0.26
UCEC	chr6	4998834	Silent	novel	S147S	0.43
UCEC	chr6	4995258	Silent	rs536356148	P304P	0.47
UCEC	chr6	4998781	Missense_Mutation	novel	I165T	0.45	Ribonuc_P_40
UCEC	chr6	4996040	Missense_Mutation	novel	E268D	0.05	Ribonuc_P_40
UCEC	chr6	5003913	Silent	NA	R30R	0.11
UCEC	chr6	4995162	Missense_Mutation	NA	E336D	0.3
UCEC	chr6	4996304	Missense_Mutation	rs752857918	E226K	0.27	Ribonuc_P_40
UCEC	chr6	5002159	Silent	NA	K70K	0.12
UCEC	chr6	4998737	Missense_Mutation	novel	L180I	0.18	Ribonuc_P_40
UCEC	chr6	4995057	3'UTR	novel		0.53
UCEC	chr6	5002143	Nonsense_Mutation	novel	E76*	0.39
UCEC	chr6	4998756	Silent	novel	K173K	0.46
UCEC	chr6	5002149	Missense_Mutation	NA	L74F	0.37
UCEC	chr6	4995258	Silent	rs536356148	P304P	0.16
UCEC	chr6	4998749	Missense_Mutation	novel	K176Q	0.08	Ribonuc_P_40
UCEC	chr6	4995270	Nonsense_Mutation	novel	Y300*	0.09	Ribonuc_P_40
UCEC	chr6	4996342	Missense_Mutation	rs761282652	T213M	0.25	Ribonuc_P_40
UCEC	chr6	5000632	Splice_Site	novel	X90_splice	0.4
UCEC	chr6	4995139	Missense_Mutation	NA	F344C	0.34
UCEC	chr6	4998819	Missense_Mutation	NA	E152D	0.3	Ribonuc_P_40
UCEC	chr6	4996076	Silent	rs762091492	E256E	0.3
UCEC	chr6	4995209	Missense_Mutation	rs138760401	P321S	0.38
UCEC	chr6	4995262	Missense_Mutation	NA	E303G	0.33	Ribonuc_P_40
UCEC	chr6	4999863	Missense_Mutation	novel	T127A	0.63
UCEC	chr6	5002236	Missense_Mutation	novel	L45I	0.35
UCEC	chr6	4996086	Splice_Site	novel	X253_splice	0.3
UCEC	chr6	5003990	Missense_Mutation	rs761806602	R5C	0.36

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
ACC	DEL	0.1667	0.19267
CESC	DEL	0.1186	0.046699
HNSC	DEL	0.1284	0.0011062
LIHC	AMP	0.3784	1.013e-05
LUSC	DEL	0.2036	0.00029978
PAAD	DEL	0.3043	0.00010152
PRAD	DEL	0.0671	0.059223
SARC	DEL	0.2412	0.014376
SKCM	AMP	0.5368	6.548e-09
UVM	AMP	0.55	2.0409e-06

Survival Analysis

Cancer	P-value	Q-value
KIRC	0.0001	Kaplan-Meier Survival Analysis
SARC	0.0027	Kaplan-Meier Survival Analysis
MESO	0.0013	Kaplan-Meier Survival Analysis
ACC	0.00013	Kaplan-Meier Survival Analysis
SKCM	0.013	Kaplan-Meier Survival Analysis
BRCA	0.048	Kaplan-Meier Survival Analysis
KIRP	0.033	Kaplan-Meier Survival Analysis
READ	0.013	Kaplan-Meier Survival Analysis
UCEC	0.0001	Kaplan-Meier Survival Analysis
LIHC	0.0016	Kaplan-Meier Survival Analysis
LGG	0.00021	Kaplan-Meier Survival Analysis
THCA	0.0089	Kaplan-Meier Survival Analysis
LUAD	0.043	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Pathways

Phenotypes

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000124787 (Gene tree)
Gene ID: 10799
Gene Symbol: RPP40
Alias: bA428J1.3|RNASEP1
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 11,650 bases
Position: chr6:4,992,414-5,004,063
Accession: 20992
RBP type: canonical RBP
Summary: (Ribonuclease P/MRP Subunit P40) is a Protein Coding gene. Among its related pathways are Gene Expression and tRNA processing. Gene Ontology (GO) annotations related to this gene include ribonuclease P activity.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000419431	Ribonuc_P_40	PF08584.11	5.1e-95	1	1
ENSP00000369391	Ribonuc_P_40	PF08584.11	8.6e-95	1	1
ENSP00000317998	Ribonuc_P_40	PF08584.11	8.6e-78	1	1
ENSP00000484334	Ribonuc_P_40	PF08584.11	9.7e-75	1	2
ENSP00000484334	Ribonuc_P_40	PF08584.11	9.7e-75	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
8756706	Magnesium ions are required by Bacillus subtilis ribonuclease P RNA for both binding and cleaving precursor tRNAAsp.	Biochemistry	1996 Aug 13	Beebe JA	-
12003489	Purification and characterization of Rpp25, an RNA-binding protein subunit of human ribonuclease P.	RNA	2002 Mar	Guerrier-Takada C	-
22790959	Thermodynamic analysis of a multifunctional RNA-binding protein, PhoRpp38, in the hyperthermophilic archaeon Pyrococcus horikoshii OT3.	Biosci Biotechnol Biochem	2012	Oshima K	-
16228004	Structural perspective on the activation of RNAse P RNA by protein.	Nat Struct Mol Biol	2005 Nov	Buck AH	-
19917291	Binding of C5 protein to P RNA enhances the rate constant for catalysis for P RNA processing of pre-tRNAs lacking a consensus (+ 1)/C(+ 72) pair.	J Mol Biol	2010 Feb 5	Sun L	doi: 10.1016/j.jmb.2009.11.027
23364423	The functional exchangeability of pk- and k-turns in RNA structure.	RNA Biol	2013 Mar	Daldrop P	doi: 10.4161/rna.23673
11980722	Evidence for a polynuclear metal ion binding site in the catalytic domain of ribonuclease P RNA.	EMBO J	2002 May 1	Christian EL	-
11170376	Synthetic inhibitors of the processing of pretransfer RNA by the ribonuclease P ribozyme: enzyme inhibitors which act by binding to substrate.	Biochemistry	2001 Jan 23	Hori Y	-
10623511	The structure of ribonuclease P protein from Staphylococcus aureus reveals a unique binding site for single-stranded RNA.	J Mol Biol	2000 Jan 7	Spitzfaden C	-
23221704	A distinct binding mode of archaeal ribonuclease P proteins to RNA.	Biosci Biotechnol Biochem	2012	Ishihara M	-

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000380051	RPP40-202	1483	XM_011514253	ENSP00000369391	363 (aa)	XP_011512555	O75818
ENST00000464646	RPP40-203	1042	XM_024446310	ENSP00000419431	303 (aa)	XP_024302078	X6RLL4
ENST00000618533	RPP40-207	1056	XM_024446309	ENSP00000484334	321 (aa)	XP_024302077	A0A087X1N3
ENST00000479782	RPP40-205	500	-	ENSP00000418874	113 (aa)	-	F8WC38
ENST00000483546	RPP40-206	654	-	-	- (aa)	-	-
ENST00000319533	RPP40-201	1088	-	ENSP00000317998	340 (aa)	-	O75818
ENST00000468105	RPP40-204	632	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000124787's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03008	Ribosome biogenesis in eukaryotes	KEGG
hsa03013	RNA transport	KEGG

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000124787	Myocardial Infarction	6.7473595E-004	-

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000124787's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000124787	RPP40	88	32.107	ENSAPOG00000008660	rpp40	92	32.107	Acanthochromis_polyacanthus
ENSG00000124787	RPP40	100	87.052	ENSAMEG00000012938	RPP40	100	87.052	Ailuropoda_melanoleuca
ENSG00000124787	RPP40	98	36.964	ENSACIG00000003617	rpp40	98	36.464	Amphilophus_citrinellus
ENSG00000124787	RPP40	98	38.926	ENSAOCG00000011846	rpp40	99	37.815	Amphiprion_ocellaris
ENSG00000124787	RPP40	98	38.926	ENSAPEG00000001322	rpp40	99	37.815	Amphiprion_percula
ENSG00000124787	RPP40	98	39.333	ENSATEG00000006584	rpp40	99	38.440	Anabas_testudineus
ENSG00000124787	RPP40	99	66.667	ENSAPLG00000005691	RPP40	99	66.667	Anas_platyrhynchos
ENSG00000124787	RPP40	99	64.548	ENSACAG00000006550	RPP40	88	62.953	Anolis_carolinensis
ENSG00000124787	RPP40	100	94.706	ENSANAG00000029246	RPP40	100	94.706	Aotus_nancymaae
ENSG00000124787	RPP40	98	38.851	ENSACLG00000015883	rpp40	96	38.592	Astatotilapia_calliptera
ENSG00000124787	RPP40	99	48.344	ENSAMXG00000001755	rpp40	99	48.739	Astyanax_mexicanus
ENSG00000124787	RPP40	100	82.645	ENSBTAG00000003332	RPP40	100	82.645	Bos_taurus
ENSG00000124787	RPP40	100	95.588	ENSCJAG00000021373	RPP40	100	95.588	Callithrix_jacchus
ENSG00000124787	RPP40	100	86.501	ENSCAFG00000009435	RPP40	100	86.501	Canis_familiaris
ENSG00000124787	RPP40	100	86.501	ENSCAFG00020013380	RPP40	100	86.501	Canis_lupus_dingo
ENSG00000124787	RPP40	100	82.369	ENSCHIG00000016849	RPP40	100	82.369	Capra_hircus
ENSG00000124787	RPP40	100	89.769	ENSTSYG00000032857	RPP40	100	89.769	Carlito_syrichta
ENSG00000124787	RPP40	100	79.208	ENSCAPG00000004957	RPP40	98	78.899	Cavia_aperea
ENSG00000124787	RPP40	100	86.139	ENSCPOG00000005855	RPP40	100	85.399	Cavia_porcellus
ENSG00000124787	RPP40	100	96.176	ENSCCAG00000019809	RPP40	100	96.176	Cebus_capucinus
ENSG00000124787	RPP40	100	96.176	ENSCATG00000038787	RPP40	100	96.176	Cercocebus_atys
ENSG00000124787	RPP40	100	85.149	ENSCLAG00000003235	RPP40	100	84.573	Chinchilla_lanigera
ENSG00000124787	RPP40	100	96.419	ENSCSAG00000007307	RPP40	100	96.419	Chlorocebus_sabaeus
ENSG00000124787	RPP40	83	69.600	ENSCHOG00000005856	-	100	69.600	Choloepus_hoffmanni
ENSG00000124787	RPP40	99	69.868	ENSCPBG00000009003	RPP40	99	69.167	Chrysemys_picta_bellii
ENSG00000124787	RPP40	100	97.059	ENSCANG00000033965	RPP40	100	97.059	Colobus_angolensis_palliatus
ENSG00000124787	RPP40	100	80.198	ENSCGRG00001018328	Rpp40	100	79.339	Cricetulus_griseus_chok1gshd
ENSG00000124787	RPP40	100	80.198	ENSCGRG00000011344	Rpp40	100	79.339	Cricetulus_griseus_crigri
ENSG00000124787	RPP40	98	36.236	ENSCSEG00000015006	-	98	36.236	Cynoglossus_semilaevis
ENSG00000124787	RPP40	89	33.094	ENSCVAG00000012169	rpp40	100	33.094	Cyprinodon_variegatus
ENSG00000124787	RPP40	99	49.502	ENSDARG00000017605	rpp40	99	50.000	Danio_rerio
ENSG00000124787	RPP40	82	82.828	ENSDNOG00000048136	RPP40	99	82.828	Dasypus_novemcinctus
ENSG00000124787	RPP40	100	83.498	ENSDORG00000029944	-	100	83.471	Dipodomys_ordii
ENSG00000124787	RPP40	100	63.277	ENSDORG00000011196	-	100	63.277	Dipodomys_ordii
ENSG00000124787	RPP40	90	80.734	ENSETEG00000007458	RPP40	100	66.391	Echinops_telfairi
ENSG00000124787	RPP40	98	43.662	ENSEBUG00000000386	rpp40	99	43.662	Eptatretus_burgeri
ENSG00000124787	RPP40	100	87.879	ENSEASG00005012116	RPP40	80	87.879	Equus_asinus_asinus
ENSG00000124787	RPP40	100	88.154	ENSECAG00000017247	RPP40	80	88.154	Equus_caballus
ENSG00000124787	RPP40	82	66.667	ENSEEUG00000012087	RPP40	100	66.667	Erinaceus_europaeus
ENSG00000124787	RPP40	98	49.498	ENSELUG00000017004	rpp40	99	48.324	Esox_lucius
ENSG00000124787	RPP40	100	87.052	ENSFCAG00000009249	RPP40	100	87.052	Felis_catus
ENSG00000124787	RPP40	99	66.242	ENSFALG00000013166	RPP40	100	64.832	Ficedula_albicollis
ENSG00000124787	RPP40	96	70.790	ENSFDAG00000000265	-	99	70.790	Fukomys_damarensis
ENSG00000124787	RPP40	100	86.799	ENSFDAG00000013001	-	100	86.777	Fukomys_damarensis
ENSG00000124787	RPP40	98	39.597	ENSFHEG00000021429	rpp40	88	39.496	Fundulus_heteroclitus
ENSG00000124787	RPP40	98	38.926	ENSGMOG00000018653	rpp40	100	43.929	Gadus_morhua
ENSG00000124787	RPP40	99	65.894	ENSGALG00000036074	RPP40	99	65.278	Gallus_gallus
ENSG00000124787	RPP40	98	34.228	ENSGAFG00000004189	-	98	34.228	Gambusia_affinis
ENSG00000124787	RPP40	98	39.262	ENSGACG00000002472	rpp40	99	38.655	Gasterosteus_aculeatus
ENSG00000124787	RPP40	99	70.199	ENSGAGG00000012918	RPP40	99	69.444	Gopherus_agassizii
ENSG00000124787	RPP40	100	99.065	ENSGGOG00000013764	RPP40	100	99.065	Gorilla_gorilla
ENSG00000124787	RPP40	99	38.411	ENSHBUG00000009378	rpp40	93	37.920	Haplochromis_burtoni
ENSG00000124787	RPP40	100	86.226	ENSHGLG00000004871	RPP40	100	86.226	Heterocephalus_glaber_female
ENSG00000124787	RPP40	100	86.226	ENSHGLG00100002080	RPP40	100	86.226	Heterocephalus_glaber_male
ENSG00000124787	RPP40	97	32.313	ENSHCOG00000013264	-	94	30.878	Hippocampus_comes
ENSG00000124787	RPP40	99	48.056	ENSIPUG00000008951	RPP40	99	48.056	Ictalurus_punctatus
ENSG00000124787	RPP40	100	85.950	ENSSTOG00000011199	RPP40	100	85.950	Ictidomys_tridecemlineatus
ENSG00000124787	RPP40	100	79.706	ENSJJAG00000020629	Rpp40	100	79.706	Jaculus_jaculus
ENSG00000124787	RPP40	98	36.975	ENSKMAG00000019358	rpp40	99	36.975	Kryptolebias_marmoratus
ENSG00000124787	RPP40	98	40.604	ENSLBEG00000022724	rpp40	99	40.056	Labrus_bergylta
ENSG00000124787	RPP40	99	59.444	ENSLACG00000014848	RPP40	99	59.444	Latimeria_chalumnae
ENSG00000124787	RPP40	100	53.719	ENSLOCG00000011650	rpp40	100	53.719	Lepisosteus_oculatus
ENSG00000124787	RPP40	100	85.149	ENSLAFG00000007530	RPP40	100	85.149	Loxodonta_africana
ENSG00000124787	RPP40	100	96.471	ENSMFAG00000043100	RPP40	100	96.471	Macaca_fascicularis
ENSG00000124787	RPP40	100	96.176	ENSMMUG00000004966	RPP40	100	96.176	Macaca_mulatta
ENSG00000124787	RPP40	100	97.059	ENSMNEG00000041986	RPP40	100	97.059	Macaca_nemestrina
ENSG00000124787	RPP40	98	86.866	ENSMLEG00000040851	RPP40	100	93.750	Mandrillus_leucophaeus
ENSG00000124787	RPP40	98	39.262	ENSMAMG00000019551	rpp40	98	38.655	Mastacembelus_armatus
ENSG00000124787	RPP40	99	39.404	ENSMZEG00005019475	rpp40	99	39.058	Maylandia_zebra
ENSG00000124787	RPP40	99	67.219	ENSMGAG00000004009	RPP40	99	61.944	Meleagris_gallopavo
ENSG00000124787	RPP40	100	83.529	ENSMAUG00000010268	Rpp40	100	83.529	Mesocricetus_auratus
ENSG00000124787	RPP40	100	87.603	ENSMICG00000003297	RPP40	100	87.353	Microcebus_murinus
ENSG00000124787	RPP40	100	83.824	ENSMOCG00000000305	Rpp40	100	83.824	Microtus_ochrogaster
ENSG00000124787	RPP40	98	34.911	ENSMMOG00000020591	-	99	34.911	Mola_mola
ENSG00000124787	RPP40	100	80.495	ENSMODG00000009826	RPP40	100	80.495	Monodelphis_domestica
ENSG00000124787	RPP40	98	39.262	ENSMALG00000020133	rpp40	99	38.655	Monopterus_albus
ENSG00000124787	RPP40	100	83.747	MGP_CAROLIEiJ_G0018429	Rpp40	100	83.747	Mus_caroli
ENSG00000124787	RPP40	100	84.298	ENSMUSG00000021418	Rpp40	100	84.298	Mus_musculus
ENSG00000124787	RPP40	100	82.941	MGP_PahariEiJ_G0019497	Rpp40	100	82.941	Mus_pahari
ENSG00000124787	RPP40	100	83.747	MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	Mus_spretus
ENSG00000124787	RPP40	100	86.501	ENSMPUG00000000530	RPP40	93	86.501	Mustela_putorius_furo
ENSG00000124787	RPP40	100	85.149	ENSMLUG00000000501	RPP40	100	85.124	Myotis_lucifugus
ENSG00000124787	RPP40	95	76.590	ENSNGAG00000022529	-	100	76.590	Nannospalax_galili
ENSG00000124787	RPP40	100	86.139	ENSNGAG00000023955	-	100	85.399	Nannospalax_galili
ENSG00000124787	RPP40	99	34.967	ENSNBRG00000017465	rpp40	86	37.171	Neolamprologus_brichardi
ENSG00000124787	RPP40	100	97.353	ENSNLEG00000034397	RPP40	100	97.353	Nomascus_leucogenys
ENSG00000124787	RPP40	100	74.105	ENSMEUG00000005300	RPP40	100	74.105	Notamacropus_eugenii
ENSG00000124787	RPP40	100	78.788	ENSODEG00000018153	-	100	78.788	Octodon_degus
ENSG00000124787	RPP40	100	76.898	ENSODEG00000006170	-	100	83.278	Octodon_degus
ENSG00000124787	RPP40	100	83.828	ENSODEG00000007255	-	100	83.196	Octodon_degus
ENSG00000124787	RPP40	99	39.404	ENSONIG00000014016	rpp40	99	39.058	Oreochromis_niloticus
ENSG00000124787	RPP40	99	73.597	ENSOANG00000001200	RPP40	99	73.597	Ornithorhynchus_anatinus
ENSG00000124787	RPP40	98	78.859	ENSOCUG00000000354	RPP40	99	76.177	Oryctolagus_cuniculus
ENSG00000124787	RPP40	99	38.056	ENSORLG00000008242	-	100	38.056	Oryzias_latipes
ENSG00000124787	RPP40	99	37.222	ENSORLG00020013745	-	91	37.222	Oryzias_latipes_hni
ENSG00000124787	RPP40	99	37.778	ENSORLG00015000887	-	100	37.778	Oryzias_latipes_hsok
ENSG00000124787	RPP40	99	38.504	ENSOMEG00000002747	rpp40	100	38.504	Oryzias_melastigma
ENSG00000124787	RPP40	100	88.449	ENSOGAG00000006055	RPP40	100	88.430	Otolemur_garnettii
ENSG00000124787	RPP40	100	81.518	ENSOARG00000018783	RPP40	100	81.518	Ovis_aries
ENSG00000124787	RPP40	100	98.754	ENSPPAG00000023703	RPP40	100	98.754	Pan_paniscus
ENSG00000124787	RPP40	100	86.777	ENSPPRG00000005612	RPP40	100	86.777	Panthera_pardus
ENSG00000124787	RPP40	100	80.165	ENSPTIG00000018847	RPP40	100	80.165	Panthera_tigris_altaica
ENSG00000124787	RPP40	100	98.442	ENSPTRG00000017690	RPP40	100	98.442	Pan_troglodytes
ENSG00000124787	RPP40	100	96.471	ENSPANG00000017865	RPP40	100	96.471	Papio_anubis
ENSG00000124787	RPP40	98	50.279	ENSPKIG00000006311	rpp40	99	50.279	Paramormyrops_kingsleyae
ENSG00000124787	RPP40	73	70.270	ENSPSIG00000007854	RPP40	100	70.270	Pelodiscus_sinensis
ENSG00000124787	RPP40	97	77.816	ENSPEMG00000020809	Rpp40	91	78.025	Peromyscus_maniculatus_bairdii
ENSG00000124787	RPP40	90	45.985	ENSPMAG00000008412	rpp40	99	45.985	Petromyzon_marinus
ENSG00000124787	RPP40	100	80.165	ENSPCIG00000010682	RPP40	100	80.165	Phascolarctos_cinereus
ENSG00000124787	RPP40	98	36.000	ENSPFOG00000011460	rpp40	98	35.376	Poecilia_formosa
ENSG00000124787	RPP40	98	36.242	ENSPLAG00000001334	rpp40	99	35.854	Poecilia_latipinna
ENSG00000124787	RPP40	98	36.242	ENSPMEG00000007721	rpp40	99	35.574	Poecilia_mexicana
ENSG00000124787	RPP40	98	36.913	ENSPREG00000009215	rpp40	99	36.695	Poecilia_reticulata
ENSG00000124787	RPP40	100	99.174	ENSPPYG00000016194	RPP40	100	99.174	Pongo_abelii
ENSG00000124787	RPP40	79	79.775	ENSPCAG00000002700	-	99	84.239	Procavia_capensis
ENSG00000124787	RPP40	100	88.981	ENSPCOG00000003907	RPP40	100	88.981	Propithecus_coquereli
ENSG00000124787	RPP40	100	89.109	ENSPVAG00000011325	RPP40	100	88.705	Pteropus_vampyrus
ENSG00000124787	RPP40	99	37.417	ENSPNYG00000004432	rpp40	99	37.417	Pundamilia_nyererei
ENSG00000124787	RPP40	99	47.525	ENSPNAG00000019125	rpp40	99	47.207	Pygocentrus_nattereri
ENSG00000124787	RPP40	100	84.158	ENSRNOG00000016226	Rpp40	100	84.158	Rattus_norvegicus
ENSG00000124787	RPP40	100	97.353	ENSRBIG00000035800	RPP40	100	97.353	Rhinopithecus_bieti
ENSG00000124787	RPP40	100	97.353	ENSRROG00000039116	RPP40	100	97.353	Rhinopithecus_roxellana
ENSG00000124787	RPP40	100	95.588	ENSSBOG00000020297	RPP40	100	95.588	Saimiri_boliviensis_boliviensis
ENSG00000124787	RPP40	92	79.496	ENSSHAG00000002102	RPP40	100	79.496	Sarcophilus_harrisii
ENSG00000124787	RPP40	98	50.167	ENSSFOG00015001142	rpp40	81	48.760	Scleropages_formosus
ENSG00000124787	RPP40	98	37.919	ENSSDUG00000007202	rpp40	99	37.535	Seriola_dumerili
ENSG00000124787	RPP40	98	38.255	ENSSLDG00000017563	rpp40	99	37.815	Seriola_lalandi_dorsalis
ENSG00000124787	RPP40	99	67.219	ENSSPUG00000017487	-	99	66.981	Sphenodon_punctatus
ENSG00000124787	RPP40	97	65.424	ENSSPUG00000018950	-	100	65.424	Sphenodon_punctatus
ENSG00000124787	RPP40	98	40.067	ENSSPAG00000022716	rpp40	99	39.216	Stegastes_partitus
ENSG00000124787	RPP40	100	80.997	ENSSSCG00000000998	RPP40	100	80.997	Sus_scrofa
ENSG00000124787	RPP40	58	71.186	ENSTGUG00000015246	-	100	71.186	Taeniopygia_guttata
ENSG00000124787	RPP40	99	67.550	ENSTGUG00000002258	-	100	65.363	Taeniopygia_guttata
ENSG00000124787	RPP40	98	40.268	ENSTRUG00000003755	rpp40	98	39.377	Takifugu_rubripes
ENSG00000124787	RPP40	98	37.584	ENSTNIG00000003077	rpp40	98	37.394	Tetraodon_nigroviridis
ENSG00000124787	RPP40	83	61.600	ENSTBEG00000014467	-	73	61.600	Tupaia_belangeri
ENSG00000124787	RPP40	99	77.072	ENSTTRG00000007319	RPP40	100	77.072	Tursiops_truncatus
ENSG00000124787	RPP40	100	86.777	ENSUAMG00000002159	RPP40	100	86.777	Ursus_americanus
ENSG00000124787	RPP40	100	86.777	ENSUMAG00000018639	RPP40	94	86.777	Ursus_maritimus
ENSG00000124787	RPP40	81	62.245	ENSVPAG00000004652	-	99	62.245	Vicugna_pacos
ENSG00000124787	RPP40	100	85.950	ENSVVUG00000005451	RPP40	100	85.950	Vulpes_vulpes
ENSG00000124787	RPP40	98	57.718	ENSXETG00000017617	rpp40	100	55.616	Xenopus_tropicalis
ENSG00000124787	RPP40	63	43.307	ENSXCOG00000019991	-	93	30.838	Xiphophorus_couchianus
ENSG00000124787	RPP40	98	31.024	ENSXMAG00000024940	rpp40	98	31.024	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001682	tRNA 5'-leader removal	30454648.	IDA	Process
GO:0001682	tRNA 5'-leader removal	-	TAS	Process
GO:0004526	ribonuclease P activity	30454648.	IDA	Function
GO:0005634	nucleus	9630247.	TAS	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005655	nucleolar ribonuclease P complex	9630247.	TAS	Component
GO:0030681	multimeric ribonuclease P complex	30454648.	IDA	Component
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process

EuRBPDB

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Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

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Expression

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Pathways

Phenotypes

PPI

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.