EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
ACC	chr9	132630306	Missense_Mutation	novel	S635L	0.17
BLCA	chr9	132625691	Silent	rs770817452	C667C	0.32
BLCA	chr9	132646948	Missense_Mutation	novel	P465T	0.38
BLCA	chr9	132648192	Missense_Mutation	novel	E427K	0.12
BLCA	chr9	132648206	Missense_Mutation	NA	S422L	0.38
BLCA	chr9	132648469	Missense_Mutation	NA	S380C	0.27
BRCA	chr9	132651116	Missense_Mutation	novel	L317I	0.1
BRCA	chr9	132658727	Missense_Mutation	NA	L283V	0.34	ResIII
BRCA	chr9	132638362	Intron	NA		0.35
BRCA	chr9	132662503	Missense_Mutation	NA	E195K	0.43
BRCA	chr9	132662491	Missense_Mutation	NA	I199L	0.15
BRCA	chr9	132612107	Missense_Mutation	NA	K763N	0.4
BRCA	chr9	132645971	Missense_Mutation	rs778619874	A540V	0.09
CESC	chr9	132594685	3'UTR	novel		0.35
CESC	chr9	132630353	Silent	rs768329211	T619T	0.34
CESC	chr9	132645952	Silent	novel	L546L	0.17
CESC	chr9	132595047	Missense_Mutation	novel	S792L	0.42
CESC	chr9	132618366	Missense_Mutation	novel	H702Y	0.55
COAD	chr9	132647024	Silent	NA	D439D	0.41
COAD	chr9	132632082	Missense_Mutation	NA	A589T	0.2
COAD	chr9	132662563	Missense_Mutation	rs367667543	A175T	0.25
COAD	chr9	132647032	Silent	novel	L437L	0.1
COAD	chr9	132646934	Silent	rs148813418	G469G	0.3
COAD	chr9	132594923	Silent	rs763665487	K833K	0.4
COAD	chr9	132662563	Missense_Mutation	rs367667543	A175T	0.32
COAD	chr9	132662554	Frame_Shift_Del	NA	*M178Cfs42**	0.4
COAD	chr9	132651092	Missense_Mutation	NA	V325I	0.42
COAD	chr9	132662664	Missense_Mutation	rs200357088	A141V	0.27
COAD	chr9	132595107	Missense_Mutation	novel	D772A	0.13
COAD	chr9	132648469	Missense_Mutation	NA	S380C	0.37
COAD	chr9	132632079	Missense_Mutation	rs754917433	R590W	0.15
COAD	chr9	132662274	Missense_Mutation	novel	L237R	0.15
COAD	chr9	132662630	Missense_Mutation	rs71503153	N152K	0.28
GBM	chr9	132595073	Silent	rs367878457	L783L	0.35
GBM	chr9	132595112	Splice_Site	NA	X770_splice	0.4
GBM	chr9	132670246	Missense_Mutation	novel	A2T	0.62
GBM	chr9	132646016	Missense_Mutation	novel	F525C	0.59
GBM	chr9	132652465	Missense_Mutation	novel	L311F	0.08
HNSC	chr9	132594988	Missense_Mutation	novel	G812R	0.2
HNSC	chr9	132625738	Missense_Mutation	novel	E652K	0.12
KIRC	chr9	132638165	Intron	novel		0.57
KIRC	chr9	132659766	Missense_Mutation	NA	S261T	0.29	ResIII
KIRC	chr9	132638186	Intron	novel		0.42
KIRC	chr9	132594904	Missense_Mutation	NA	G840R	0.2
KIRP	chr9	132630295	Missense_Mutation	novel	Y639H	0.47
KIRP	chr9	132670120	Missense_Mutation	novel	S44C	0.42
KIRP	chr9	132670228	Missense_Mutation	NA	Q8E	0.68
LGG	chr9	132659718	Missense_Mutation	rs766609776	T277M	0.19	ResIII
LGG	chr9	132647017	Missense_Mutation	NA	S442G	0.41
LIHC	chr9	132662563	Missense_Mutation	rs367667543	A175T	0.08
LIHC	chr9	132630347	Frame_Shift_Del	novel	*I622Lfs41**	0.47
LIHC	chr9	132630348	Missense_Mutation	novel	R621L	0.47
LUAD	chr9	132648547	Missense_Mutation	rs147990447	R354C	0.27
LUAD	chr9	132595097	Silent	NA	K775K	0.07
LUAD	chr9	132645898	Missense_Mutation	NA	Q564H	0.56
LUAD	chr9	132645980	Missense_Mutation	novel	S537I	0.46
LUAD	chr9	132646977	Frame_Shift_Del	novel	*P455Qfs31**	0.3
LUAD	chr9	132594829	3'UTR	rs372911669		0.2
LUAD	chr9	132647002	Missense_Mutation	NA	D447Y	0.45
LUAD	chr9	132648530	Silent	novel	I359I	0.06
LUAD	chr9	132646964	Silent	NA	A459A	0.28
LUSC	chr9	132652465	Missense_Mutation	novel	L311I	0.58
OV	chr9	132612193	Missense_Mutation	rs767606249	V735I	0.04
OV	chr9	132670155	Missense_Mutation	NA	R32K	0.36
PAAD	chr9	132630352	Missense_Mutation	NA	A620S	0.11
PAAD	chr9	132662563	Missense_Mutation	rs367667543	A175T	0.11
PAAD	chr9	132612105	Missense_Mutation	novel	R764T	0.17
PRAD	chr9	132646957	Missense_Mutation	novel	E462Q	0.07
PRAD	chr9	132594849	3'UTR	rs747338832		0.22
PRAD	chr9	132662455	Missense_Mutation	NA	I211V	0.16
PRAD	chr9	132642004	Splice_Region	NA	T585T	0.16
READ	chr9	132648475	Missense_Mutation	NA	H378N	0.27
READ	chr9	132625695	Missense_Mutation	NA	D666G	0.31
READ	chr9	132594849	3'UTR	rs747338832		0.36
READ	chr9	132645936	Nonsense_Mutation	rs753128554	R552*	0.4
READ	chr9	132594731	3'UTR	novel		0.47
SARC	chr9	132630379	Nonsense_Mutation	novel	E611*	0.07
SKCM	chr9	132662615	Silent	novel	L157L	0.42
SKCM	chr9	132612238	Nonsense_Mutation	novel	Q720*	0.19
SKCM	chr9	132662650	Missense_Mutation	NA	P146S	0.13
SKCM	chr9	132670034	Silent	novel	R72R	0.63
SKCM	chr9	132670035	Missense_Mutation	NA	R72K	0.63
SKCM	chr9	132662302	Missense_Mutation	NA	T228A	0.25
SKCM	chr9	132662451	Missense_Mutation	NA	P212L	0.33
SKCM	chr9	132646944	Missense_Mutation	novel	P466L	0.53
SKCM	chr9	132638293	Intron	novel		0.29
SKCM	chr9	132670035	Missense_Mutation	NA	R72K	1
SKCM	chr9	132642026	Missense_Mutation	NA	R578K	0.14
SKCM	chr9	132646045	Silent	novel	V515V	0.33
SKCM	chr9	132658713	Silent	rs760640408	I287I	0.85
SKCM	chr9	132638249	Intron	novel		0.44
SKCM	chr9	132662532	Missense_Mutation	rs560465609	S185L	0.11
SKCM	chr9	132612168	Missense_Mutation	novel	V743A	0.58
SKCM	chr9	132594870	Missense_Mutation	NA	V851A	0.1
SKCM	chr9	132594860	3'UTR	rs182619230		0.45
SKCM	chr9	132652472	Silent	NA	A308A	0.62
SKCM	chr9	132618435	Missense_Mutation	novel	H679D	0.21
SKCM	chr9	132670039	Missense_Mutation	novel	G71R	0.67
STAD	chr9	132594718	3'UTR	novel		0.13
STAD	chr9	132612094	Missense_Mutation	rs148432033	V768M	0.19
STAD	chr9	132594752	3'UTR	novel		0.19
STAD	chr9	132647024	Silent	NA	D439D	0.26
STAD	chr9	132594743	3'UTR	novel		0.42
STAD	chr9	132630337	Missense_Mutation	rs780782677	H625N	0.35
STAD	chr9	132612196	Missense_Mutation	NA	H734Y	0.06
STAD	chr9	132630352	Missense_Mutation	rs755069984	A620T	0.09
STAD	chr9	132662564	Silent	rs371271628	N174N	0.32
STAD	chr9	132630383	Silent	rs759601011	P609P	0.15
STAD	chr9	132618364	Silent	NA	H702H	0.06
STAD	chr9	132662554	Frame_Shift_Del	NA	*M178Cfs42**	0.26
STAD	chr9	132594895	Missense_Mutation	NA	R843W	0.32
STAD	chr9	132612099	Missense_Mutation	NA	A766E	0.19
STAD	chr9	132646031	Missense_Mutation	NA	C520Y	0.26
STAD	chr9	132646828	Missense_Mutation	NA	C505G	0.27
STAD	chr9	132618390	Nonsense_Mutation	NA	Q694*	0.14
UCEC	chr9	132595030	Missense_Mutation	rs780897840	D798N	0.43
UCEC	chr9	132646939	Missense_Mutation	NA	A468S	0.31
UCEC	chr9	132662459	Silent	novel	P209P	0.04
UCEC	chr9	132647040	Missense_Mutation	NA	D434V	0.27
UCEC	chr9	132645924	Missense_Mutation	novel	L556I	0.57
UCEC	chr9	132662639	Silent	NA	K149K	0.45
UCEC	chr9	132630366	Missense_Mutation	rs548078213	R615Q	0.46
UCEC	chr9	132594896	Silent	NA	Q842Q	0.22
UCEC	chr9	132612123	Missense_Mutation	NA	A758D	0.23
UCEC	chr9	132662681	Silent	rs199530487	T135T	0.45
UCEC	chr9	132650252	Missense_Mutation	novel	R346I	0.09
UCEC	chr9	132646961	Silent	novel	V460V	0.13
UCEC	chr9	132648464	Silent	novel	R381R	0.41
UCEC	chr9	132618370	Silent	rs143590944	Y700Y	0.46
UCEC	chr9	132658191	Intron	novel		0.38
UCEC	chr9	132662554	Frame_Shift_Del	NA	*M178Cfs42**	0.51
UCEC	chr9	132632061	Missense_Mutation	NA	Q596E	0.75
UCEC	chr9	132638327	Intron	novel		0.42
UCEC	chr9	132662514	Missense_Mutation	novel	R191I	0.43
UCEC	chr9	132662554	Frame_Shift_Del	NA	*M178Cfs42**	0.38
UCEC	chr9	132645935	Missense_Mutation	rs141746751	R552Q	0.57
UCEC	chr9	132625696	Missense_Mutation	NA	D666N	0.32
UCEC	chr9	132646030	Silent	rs767428677	C520C	0.34
UCEC	chr9	132594939	Missense_Mutation	rs140473313	R828H	0.34
UCEC	chr9	132662664	Missense_Mutation	novel	A141E	0.07
UCEC	chr9	132651104	Missense_Mutation	novel	S321R	0.19
UCEC	chr9	132662312	Missense_Mutation	novel	E224D	0.35
UCEC	chr9	132662532	Missense_Mutation	rs560465609	S185L	0.32
UCEC	chr9	132594757	3'UTR	novel		0.38
UCEC	chr9	132638359	Intron	novel		0.36
UCEC	chr9	132594790	3'UTR	novel		0.15
UCEC	chr9	132642019	Silent	rs745460715	G580G	0.3
UCEC	chr9	132638313	Intron	novel		0.26
UCEC	chr9	132658276	Intron	novel		0.24
UCEC	chr9	132661234	Silent	rs143522033	T247T	0.29
UCEC	chr9	132662314	Nonsense_Mutation	NA	E224*	0.49
UCEC	chr9	132618370	Silent	rs143590944	Y700Y	0.4
UCEC	chr9	132594956	Silent	rs749343290	P822P	0.23
UCEC	chr9	132618417	Nonsense_Mutation	novel	E685*	0.21
UCEC	chr9	132630306	Missense_Mutation	novel	S635L	0.23
UCEC	chr9	132645951	Missense_Mutation	novel	P547S	0.19
UCEC	chr9	132662637	Missense_Mutation	rs376851094	R150Q	0.3
UCEC	chr9	132650273	Missense_Mutation	novel	V339A	0.34
UCEC	chr9	132650281	Silent	novel	V336V	0.3
UCS	chr9	132612256	Splice_Site	novel	X714_splice	0.56

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
BRCA	DEL	0.2037	0.070727
LAML	DEL	0.0105	0.24147
LGG	AMP	0.0585	0.21332
LIHC	DEL	0.2486	0.12467
OV	DEL	0.5561	2.9521e-06
SARC	DEL	0.2218	0.00032085
THCA	DEL	0.0401	0.24038
THYM	DEL	0.0163	0.022012
UCEC	DEL	0.2208	0.0022334
UCS	DEL	0.6071	0.089783

Survival Analysis

Cancer	P-value	Q-value
KIRC	0.047	Kaplan-Meier Survival Analysis
STAD	0.018	Kaplan-Meier Survival Analysis
SARC	0.019	Kaplan-Meier Survival Analysis
ACC	0.00012	Kaplan-Meier Survival Analysis
HNSC	0.041	Kaplan-Meier Survival Analysis
SKCM	0.0052	Kaplan-Meier Survival Analysis
PRAD	0.018	Kaplan-Meier Survival Analysis
KIRP	0.001	Kaplan-Meier Survival Analysis
READ	0.011	Kaplan-Meier Survival Analysis
LIHC	0.00012	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000125485 (Gene tree)
Gene ID: 64794
Gene Symbol: DDX31
Alias: FLJ13633|FLJ23349|FLJ14578|PPP1R25
Full Name: DEAD-box helicase 31
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 77,405 bases
Position: chr9:132,592,997-132,670,401
Accession: 16715
RBP type: canonical RBP
Summary: DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this DEAD box protein family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a member of this family. The function of this member has not been determined. Alternative splicing of this gene generates multiple transcript variants encoding different isoforms. [provided by RefSeq, Apr 2016]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000310539	ResIII	PF04851.15	2.8e-06	1	1
ENSP00000387730	ResIII	PF04851.15	4.6e-06	1	1
ENSP00000361226	ResIII	PF04851.15	6.5e-06	1	1
ENSP00000361232	ResIII	PF04851.15	6.5e-06	1	1
ENSP00000310539	DEAD	PF00270.29	5.9e-48	1	1
ENSP00000387730	DEAD	PF00270.29	8.3e-48	1	1
ENSP00000361226	DEAD	PF00270.29	1.1e-47	1	1
ENSP00000361232	DEAD	PF00270.29	1.1e-47	1	1
ENSP00000479697	DEAD	PF00270.29	4.6e-12	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
24608801	RNA binding protein-mediated post-transcriptional gene regulation in medulloblastoma.	Mol Cells	2014 May	Bish R	doi: 10.14348/molcells.2014.0008

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000372159	DDX31-204	4577	XM_005272207	ENSP00000361232	851 (aa)	XP_005272264	Q9H8H2
ENST00000438527	DDX31-205	2814	-	ENSP00000387730	746 (aa)	-	F8WAJ0
ENST00000480876	DDX31-206	1333	-	ENSP00000479697	319 (aa)	-	Q9H8H2
ENST00000372153	DDX31-202	3285	XM_011518921	ENSP00000361226	851 (aa)	XP_011517223	Q9H8H2
ENST00000372155	DDX31-203	2343	-	-	- (aa)	-	-
ENST00000310532	DDX31-201	2408	-	ENSP00000310539	585 (aa)	-	Q9H8H2
ENST00000482620	DDX31-207	1051	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000125485's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000125485	Schizophrenia	3.64E-5	-

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000125485	rs10435974	9	132635903	T	Educational attainment (MTAG)	30038396	[0.0073-0.0131] unit increase	0.0102	EFO_0004784
ENSG00000125485	rs12682775	9	132615104	T	Educational attainment (years of education)	30038396	[0.0086-0.0152] unit decrease	0.0119	EFO_0004784
ENSG00000125485	rs12685594	9	132615052	?	Educational attainment (years of education)	30595370			EFO_0004784
ENSG00000125485	rs12682765	9	132614969	T	Educational attainment (years of education)	30038396	[0.0081-0.0147] unit decrease	0.0114	EFO_0004784

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000125485's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000125485	DDX31	55	31.325	ENSG00000124228	DDX27	87	34.146
ENSG00000125485	DDX31	69	31.048	ENSG00000111364	DDX55	87	35.503
ENSG00000125485	DDX31	57	30.751	ENSG00000213782	DDX47	72	39.726
ENSG00000125485	DDX31	53	41.935	ENSG00000079785	DDX1	54	42.188
ENSG00000125485	DDX31	61	30.110	ENSG00000100201	DDX17	52	30.909
ENSG00000125485	DDX31	53	30.649	ENSG00000185163	DDX51	61	30.649
ENSG00000125485	DDX31	61	30.939	ENSG00000105671	DDX49	71	41.860
ENSG00000125485	DDX31	67	34.195	ENSG00000178105	DDX10	62	34.195
ENSG00000125485	DDX31	57	30.178	ENSG00000108654	DDX5	94	35.976
ENSG00000125485	DDX31	53	31.500	ENSG00000080007	DDX43	53	31.500
ENSG00000125485	DDX31	77	34.300	ENSG00000088205	DDX18	100	35.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000125485	DDX31	81	59.711	ENSAPOG00000004212	ddx31	85	59.335	Acanthochromis_polyacanthus
ENSG00000125485	DDX31	97	82.345	ENSAMEG00000004120	DDX31	99	82.345	Ailuropoda_melanoleuca
ENSG00000125485	DDX31	73	61.255	ENSACIG00000006033	ddx31	88	61.273	Amphilophus_citrinellus
ENSG00000125485	DDX31	67	63.333	ENSAOCG00000023183	ddx31	71	63.333	Amphiprion_ocellaris
ENSG00000125485	DDX31	81	60.383	ENSATEG00000015522	ddx31	81	60.252	Anabas_testudineus
ENSG00000125485	DDX31	89	67.463	ENSAPLG00000016396	DDX31	99	67.204	Anas_platyrhynchos
ENSG00000125485	DDX31	98	94.231	ENSANAG00000035120	DDX31	100	94.231	Aotus_nancymaae
ENSG00000125485	DDX31	81	59.646	ENSACLG00000008720	ddx31	99	58.033	Astatotilapia_calliptera
ENSG00000125485	DDX31	88	54.332	ENSAMXG00000009673	ddx31	97	54.332	Astyanax_mexicanus
ENSG00000125485	DDX31	97	79.533	ENSBTAG00000003530	DDX31	99	80.851	Bos_taurus
ENSG00000125485	DDX31	100	95.040	ENSCJAG00000018173	DDX31	99	96.711	Callithrix_jacchus
ENSG00000125485	DDX31	83	84.330	ENSCAFG00020024548	DDX31	91	84.330	Canis_lupus_dingo
ENSG00000125485	DDX31	97	79.533	ENSCHIG00000020011	DDX31	99	79.533	Capra_hircus
ENSG00000125485	DDX31	98	83.995	ENSTSYG00000009182	DDX31	99	83.995	Carlito_syrichta
ENSG00000125485	DDX31	97	77.455	ENSCAPG00000015227	DDX31	99	77.455	Cavia_aperea
ENSG00000125485	DDX31	95	80.423	ENSCPOG00000014243	DDX31	98	78.846	Cavia_porcellus
ENSG00000125485	DDX31	100	95.040	ENSCCAG00000025989	DDX31	100	95.040	Cebus_capucinus
ENSG00000125485	DDX31	100	94.017	ENSCATG00000038462	DDX31	100	94.017	Cercocebus_atys
ENSG00000125485	DDX31	91	85.672	ENSCLAG00000008431	DDX31	98	85.672	Chinchilla_lanigera
ENSG00000125485	DDX31	100	95.442	ENSCSAG00000014953	DDX31	100	95.442	Chlorocebus_sabaeus
ENSG00000125485	DDX31	96	83.287	ENSCHOG00000001526	DDX31	99	83.287	Choloepus_hoffmanni
ENSG00000125485	DDX31	68	73.922	ENSCPBG00000021215	DDX31	89	73.922	Chrysemys_picta_bellii
ENSG00000125485	DDX31	78	46.610	ENSCING00000009272	-	92	46.949	Ciona_intestinalis
ENSG00000125485	DDX31	73	45.537	ENSCSAVG00000004227	-	100	45.537	Ciona_savignyi
ENSG00000125485	DDX31	100	95.710	ENSCANG00000036241	DDX31	100	95.732	Colobus_angolensis_palliatus
ENSG00000125485	DDX31	95	80.250	ENSCGRG00001014191	Ddx31	99	80.250	Cricetulus_griseus_chok1gshd
ENSG00000125485	DDX31	95	80.250	ENSCGRG00000008396	Ddx31	99	80.250	Cricetulus_griseus_crigri
ENSG00000125485	DDX31	81	59.806	ENSCSEG00000008541	ddx31	90	55.523	Cynoglossus_semilaevis
ENSG00000125485	DDX31	81	59.121	ENSCVAG00000000189	ddx31	99	59.330	Cyprinodon_variegatus
ENSG00000125485	DDX31	89	58.780	ENSDARG00000035507	ddx31	89	58.309	Danio_rerio
ENSG00000125485	DDX31	96	85.556	ENSDNOG00000009865	DDX31	100	85.556	Dasypus_novemcinctus
ENSG00000125485	DDX31	92	80.378	ENSDORG00000005071	Ddx31	100	80.378	Dipodomys_ordii
ENSG00000125485	DDX31	73	41.259	FBgn0027602	CG8611	59	42.710	Drosophila_melanogaster
ENSG00000125485	DDX31	89	75.299	ENSETEG00000007908	DDX31	99	70.687	Echinops_telfairi
ENSG00000125485	DDX31	62	40.890	ENSEBUG00000014723	-	99	40.890	Eptatretus_burgeri
ENSG00000125485	DDX31	98	84.543	ENSEASG00005009845	DDX31	99	84.543	Equus_asinus_asinus
ENSG00000125485	DDX31	98	84.140	ENSECAG00000005146	DDX31	99	84.140	Equus_caballus
ENSG00000125485	DDX31	98	79.918	ENSEEUG00000012785	DDX31	97	79.918	Erinaceus_europaeus
ENSG00000125485	DDX31	83	61.022	ENSELUG00000001052	ddx31	88	59.248	Esox_lucius
ENSG00000125485	DDX31	96	74.721	ENSFCAG00000007106	DDX31	100	74.721	Felis_catus
ENSG00000125485	DDX31	89	67.958	ENSFALG00000001468	DDX31	98	67.794	Ficedula_albicollis
ENSG00000125485	DDX31	91	84.302	ENSFDAG00000007853	DDX31	99	84.302	Fukomys_damarensis
ENSG00000125485	DDX31	82	59.809	ENSFHEG00000009047	ddx31	87	58.462	Fundulus_heteroclitus
ENSG00000125485	DDX31	55	73.571	ENSGALG00000041473	DDX31	83	73.571	Gallus_gallus
ENSG00000125485	DDX31	81	57.005	ENSGAFG00000009888	ddx31	85	56.869	Gambusia_affinis
ENSG00000125485	DDX31	94	70.413	ENSGAGG00000012482	DDX31	96	70.413	Gopherus_agassizii
ENSG00000125485	DDX31	100	98.257	ENSGGOG00000008314	DDX31	100	98.120	Gorilla_gorilla
ENSG00000125485	DDX31	82	59.300	ENSHBUG00000019539	ddx31	71	59.300	Haplochromis_burtoni
ENSG00000125485	DDX31	93	83.936	ENSHGLG00000013194	DDX31	94	83.936	Heterocephalus_glaber_female
ENSG00000125485	DDX31	85	80.315	ENSHGLG00100016868	DDX31	100	80.315	Heterocephalus_glaber_male
ENSG00000125485	DDX31	76	61.996	ENSHCOG00000020998	ddx31	81	61.996	Hippocampus_comes
ENSG00000125485	DDX31	80	62.397	ENSIPUG00000020592	ddx31	86	61.722	Ictalurus_punctatus
ENSG00000125485	DDX31	90	80.059	ENSSTOG00000007985	DDX31	98	80.059	Ictidomys_tridecemlineatus
ENSG00000125485	DDX31	92	77.810	ENSJJAG00000018491	Ddx31	99	77.810	Jaculus_jaculus
ENSG00000125485	DDX31	67	65.731	ENSKMAG00000006165	ddx31	91	65.606	Kryptolebias_marmoratus
ENSG00000125485	DDX31	81	59.840	ENSLBEG00000008550	ddx31	93	54.712	Labrus_bergylta
ENSG00000125485	DDX31	78	57.701	ENSLACG00000008136	DDX31	95	62.333	Latimeria_chalumnae
ENSG00000125485	DDX31	90	55.971	ENSLOCG00000005630	ddx31	93	55.971	Lepisosteus_oculatus
ENSG00000125485	DDX31	92	87.500	ENSLAFG00000015379	DDX31	99	87.500	Loxodonta_africana
ENSG00000125485	DDX31	100	95.308	ENSMFAG00000036342	DDX31	100	94.530	Macaca_fascicularis
ENSG00000125485	DDX31	100	95.308	ENSMMUG00000004590	DDX31	100	95.308	Macaca_mulatta
ENSG00000125485	DDX31	100	95.174	ENSMNEG00000045539	DDX31	100	95.174	Macaca_nemestrina
ENSG00000125485	DDX31	100	95.710	ENSMLEG00000032393	DDX31	100	94.872	Mandrillus_leucophaeus
ENSG00000125485	DDX31	84	60.156	ENSMAMG00000019252	ddx31	89	60.156	Mastacembelus_armatus
ENSG00000125485	DDX31	81	58.306	ENSMZEG00005020937	ddx31	99	58.361	Maylandia_zebra
ENSG00000125485	DDX31	87	66.718	ENSMGAG00000006002	DDX31	93	66.718	Meleagris_gallopavo
ENSG00000125485	DDX31	85	83.465	ENSMAUG00000016824	Ddx31	99	83.465	Mesocricetus_auratus
ENSG00000125485	DDX31	98	88.692	ENSMICG00000010581	DDX31	99	88.692	Microcebus_murinus
ENSG00000125485	DDX31	92	81.034	ENSMOCG00000020938	Ddx31	99	81.097	Microtus_ochrogaster
ENSG00000125485	DDX31	73	59.173	ENSMMOG00000020996	ddx31	95	59.002	Mola_mola
ENSG00000125485	DDX31	92	79.942	ENSMODG00000012555	DDX31	94	79.942	Monodelphis_domestica
ENSG00000125485	DDX31	81	60.000	ENSMALG00000002614	ddx31	83	59.777	Monopterus_albus
ENSG00000125485	DDX31	92	79.046	MGP_CAROLIEiJ_G0023360	Ddx31	99	79.046	Mus_caroli
ENSG00000125485	DDX31	92	79.624	ENSMUSG00000026806	Ddx31	99	79.624	Mus_musculus
ENSG00000125485	DDX31	92	79.365	MGP_PahariEiJ_G0024817	Ddx31	99	79.365	Mus_pahari
ENSG00000125485	DDX31	92	79.480	MGP_SPRETEiJ_G0024277	Ddx31	99	79.480	Mus_spretus
ENSG00000125485	DDX31	94	83.073	ENSMPUG00000012522	DDX31	83	83.073	Mustela_putorius_furo
ENSG00000125485	DDX31	92	74.928	ENSMLUG00000011507	DDX31	93	75.072	Myotis_lucifugus
ENSG00000125485	DDX31	90	83.756	ENSNGAG00000020928	Ddx31	98	83.113	Nannospalax_galili
ENSG00000125485	DDX31	81	60.797	ENSNBRG00000024320	ddx31	99	60.065	Neolamprologus_brichardi
ENSG00000125485	DDX31	100	97.453	ENSNLEG00000012870	DDX31	100	97.297	Nomascus_leucogenys
ENSG00000125485	DDX31	97	72.261	ENSMEUG00000008760	DDX31	99	72.261	Notamacropus_eugenii
ENSG00000125485	DDX31	66	92.857	ENSOPRG00000004477	-	78	92.857	Ochotona_princeps
ENSG00000125485	DDX31	89	75.452	ENSODEG00000015685	DDX31	97	75.452	Octodon_degus
ENSG00000125485	DDX31	81	60.065	ENSONIG00000000711	ddx31	90	60.032	Oreochromis_niloticus
ENSG00000125485	DDX31	84	75.355	ENSOANG00000005047	DDX31	99	75.513	Ornithorhynchus_anatinus
ENSG00000125485	DDX31	91	83.431	ENSOCUG00000008739	DDX31	100	83.431	Oryctolagus_cuniculus
ENSG00000125485	DDX31	80	59.355	ENSORLG00000016628	ddx31	79	58.983	Oryzias_latipes
ENSG00000125485	DDX31	80	59.194	ENSORLG00020017897	ddx31	80	58.399	Oryzias_latipes_hni
ENSG00000125485	DDX31	90	54.161	ENSOMEG00000004600	ddx31	86	54.167	Oryzias_melastigma
ENSG00000125485	DDX31	86	88.144	ENSOGAG00000004072	DDX31	100	88.144	Otolemur_garnettii
ENSG00000125485	DDX31	97	78.729	ENSOARG00000005879	DDX31	99	78.729	Ovis_aries
ENSG00000125485	DDX31	100	98.803	ENSPPAG00000027761	DDX31	100	98.803	Pan_paniscus
ENSG00000125485	DDX31	100	98.794	ENSPTRG00000021500	DDX31	100	98.632	Pan_troglodytes
ENSG00000125485	DDX31	100	95.442	ENSPANG00000025987	DDX31	100	94.712	Papio_anubis
ENSG00000125485	DDX31	94	69.034	ENSPSIG00000006722	DDX31	96	69.034	Pelodiscus_sinensis
ENSG00000125485	DDX31	88	52.959	ENSPMGG00000020721	ddx31	96	52.959	Periophthalmus_magnuspinnatus
ENSG00000125485	DDX31	90	82.985	ENSPEMG00000014798	Ddx31	97	82.448	Peromyscus_maniculatus_bairdii
ENSG00000125485	DDX31	92	79.506	ENSPCIG00000019742	DDX31	97	79.506	Phascolarctos_cinereus
ENSG00000125485	DDX31	82	56.988	ENSPFOG00000000144	ddx31	88	56.988	Poecilia_formosa
ENSG00000125485	DDX31	66	60.982	ENSPLAG00000019817	ddx31	80	61.033	Poecilia_latipinna
ENSG00000125485	DDX31	81	57.437	ENSPMEG00000018263	ddx31	86	57.437	Poecilia_mexicana
ENSG00000125485	DDX31	82	57.390	ENSPREG00000002870	-	86	57.686	Poecilia_reticulata
ENSG00000125485	DDX31	100	96.381	ENSPPYG00000019713	DDX31	100	96.005	Pongo_abelii
ENSG00000125485	DDX31	100	75.770	ENSPCAG00000004249	DDX31	91	74.741	Procavia_capensis
ENSG00000125485	DDX31	97	86.795	ENSPCOG00000010431	DDX31	99	80.314	Propithecus_coquereli
ENSG00000125485	DDX31	100	77.480	ENSPVAG00000002050	DDX31	100	72.033	Pteropus_vampyrus
ENSG00000125485	DDX31	81	58.306	ENSPNYG00000013810	ddx31	98	58.197	Pundamilia_nyererei
ENSG00000125485	DDX31	81	62.764	ENSPNAG00000022187	ddx31	97	56.207	Pygocentrus_nattereri
ENSG00000125485	DDX31	92	80.725	ENSRNOG00000013040	Ddx31	99	80.725	Rattus_norvegicus
ENSG00000125485	DDX31	100	93.834	ENSRBIG00000042353	DDX31	100	92.244	Rhinopithecus_bieti
ENSG00000125485	DDX31	100	95.979	ENSRROG00000044427	DDX31	99	97.368	Rhinopithecus_roxellana
ENSG00000125485	DDX31	79	33.231	YKR024C	-	84	33.384	Saccharomyces_cerevisiae
ENSG00000125485	DDX31	100	94.772	ENSSBOG00000021668	DDX31	100	94.772	Saimiri_boliviensis_boliviensis
ENSG00000125485	DDX31	94	78.470	ENSSHAG00000018804	DDX31	96	78.470	Sarcophilus_harrisii
ENSG00000125485	DDX31	87	60.611	ENSSFOG00015012974	ddx31	87	60.611	Scleropages_formosus
ENSG00000125485	DDX31	91	54.119	ENSSMAG00000017673	ddx31	84	54.379	Scophthalmus_maximus
ENSG00000125485	DDX31	73	57.350	ENSSDUG00000011751	ddx31	97	57.143	Seriola_dumerili
ENSG00000125485	DDX31	67	64.031	ENSSLDG00000005425	-	92	59.560	Seriola_lalandi_dorsalis
ENSG00000125485	DDX31	91	70.864	ENSSPUG00000016144	DDX31	99	70.864	Sphenodon_punctatus
ENSG00000125485	DDX31	67	63.590	ENSSPAG00000018034	ddx31	86	57.642	Stegastes_partitus
ENSG00000125485	DDX31	93	79.424	ENSSSCG00000005729	DDX31	98	76.297	Sus_scrofa
ENSG00000125485	DDX31	84	70.728	ENSTGUG00000005142	DDX31	100	70.728	Taeniopygia_guttata
ENSG00000125485	DDX31	82	55.556	ENSTRUG00000013699	ddx31	98	56.813	Takifugu_rubripes
ENSG00000125485	DDX31	83	57.870	ENSTNIG00000006039	ddx31	98	57.870	Tetraodon_nigroviridis
ENSG00000125485	DDX31	81	84.277	ENSTBEG00000013672	DDX31	100	83.306	Tupaia_belangeri
ENSG00000125485	DDX31	99	82.585	ENSTTRG00000014093	DDX31	99	76.675	Tursiops_truncatus
ENSG00000125485	DDX31	99	76.228	ENSUAMG00000024811	DDX31	98	77.869	Ursus_americanus
ENSG00000125485	DDX31	92	79.971	ENSUMAG00000016669	DDX31	97	79.971	Ursus_maritimus
ENSG00000125485	DDX31	71	73.656	ENSVPAG00000004538	-	63	73.656	Vicugna_pacos
ENSG00000125485	DDX31	83	84.168	ENSVVUG00000028399	DDX31	91	84.168	Vulpes_vulpes
ENSG00000125485	DDX31	84	60.714	ENSXETG00000006258	ddx31	99	60.714	Xenopus_tropicalis
ENSG00000125485	DDX31	75	54.039	ENSXCOG00000018753	ddx31	100	54.039	Xiphophorus_couchianus
ENSG00000125485	DDX31	81	57.030	ENSXMAG00000006678	ddx31	90	57.030	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005515	protein binding	23019224.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005730	nucleolus	23019224.	IDA	Component
GO:0005794	Golgi apparatus	-	IDA	Component
GO:0042254	ribosome biogenesis	23019224.	IMP	Process
GO:0043231	intracellular membrane-bounded organelle	-	IDA	Component

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.