PID | Title | Article | Time | Author | Doi |
---|---|---|---|---|---|
26760979 |
Cancer | Chr | Position | Mutation Type | dbSNP | Protein-change | Allele Freq | RBD |
---|---|---|---|---|---|---|---|
ACC | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
GBM | |||||||
GBM | |||||||
GBM | |||||||
GBM | |||||||
GBM | |||||||
GBM | |||||||
GBM | |||||||
HNSC | |||||||
KIRC | |||||||
KIRC | |||||||
KIRP | |||||||
LGG | |||||||
LGG | |||||||
LGG | |||||||
LUAD | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
PRAD | |||||||
PRAD | |||||||
READ | |||||||
READ | |||||||
SARC | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
THCA | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCS | |||||||
UCS |
Cancer | Type | Freq | Q-value |
---|---|---|---|
PCPG | |||
THCA | |||
THYM |
Cancer | P-value | Q-value |
---|---|---|
THYM | ||
MESO | ||
SKCM | ||
LUSC | ||
BRCA | ||
COAD | ||
PCPG | ||
BLCA | ||
CESC | ||
UCEC | ||
GBM | ||
UVM | ||
OV |
Protein ID | Domain | Pfam ID | E-value | Domain number | Total number |
---|---|---|---|---|---|
ENSP00000309749 | APOBEC_N | PF08210.11 | 1.1e-104 | 1 | 2 |
ENSP00000309749 | APOBEC_N | PF08210.11 | 1.1e-104 | 2 | 2 |
ENSP00000309749 | APOBEC_C | PF05240.14 | 3.9e-66 | 1 | 2 |
ENSP00000309749 | APOBEC_C | PF05240.14 | 3.9e-66 | 2 | 2 |
Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENST00000308521 | APOBEC3F-201 | 2694 | XM_024452178 | ENSP00000309749 | 373 (aa) | XP_024307946 | Q8IUX4 |
ENST00000381565 | APOBEC3F-202 | 616 | XM_017028643 | ENSP00000370977 | 101 (aa) | XP_016884132 | Q8IUX4 |
ENST00000491387 | APOBEC3F-204 | 570 | - | - | - (aa) | - | - |
ENST00000476513 | APOBEC3F-203 | 730 | - | - | - (aa) | - | - |
Pathway ID | Pathway Name | Source |
---|---|---|
hsa05170 | Human immunodeficiency virus 1 infection | KEGG |
Ensembl ID | Gene Symbol | Coverage | Identiy | Paralog | Gene Symbol | Coverage | Identiy |
---|---|---|---|---|---|---|---|
ENSG00000128394 | APOBEC3F | 100 | 79.032 | ENSG00000244509 | APOBEC3C | 100 | 79.032 |
ENSG00000128394 | APOBEC3F | 65 | 37.594 | ENSG00000111701 | APOBEC1 | 53 | 37.594 |
ENSG00000128394 | APOBEC3F | 100 | 82.105 | ENSG00000179750 | APOBEC3B | 99 | 59.530 |
ENSG00000128394 | APOBEC3F | 98 | 31.188 | ENSG00000124701 | APOBEC2 | 87 | 32.323 |
ENSG00000128394 | APOBEC3F | 88 | 36.025 | ENSG00000100298 | APOBEC3H | 99 | 34.759 |
ENSG00000128394 | APOBEC3F | 57 | 98.276 | ENSG00000239713 | APOBEC3G | 99 | 50.390 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSG00000128394 | APOBEC3F | 99 | 74.054 | ENSANAG00000030088 | - | 98 | 74.054 | Aotus_nancymaae |
ENSG00000128394 | APOBEC3F | 71 | 71.970 | ENSCJAG00000015317 | - | 100 | 71.970 | Callithrix_jacchus |
ENSG00000128394 | APOBEC3F | 99 | 48.128 | ENSCAFG00020002615 | - | 99 | 48.128 | Canis_lupus_dingo |
ENSG00000128394 | APOBEC3F | 97 | 55.738 | ENSTSYG00000028254 | - | 99 | 55.738 | Carlito_syrichta |
ENSG00000128394 | APOBEC3F | 99 | 52.419 | ENSTSYG00000034260 | - | 99 | 52.419 | Carlito_syrichta |
ENSG00000128394 | APOBEC3F | 97 | 50.549 | ENSTSYG00000030036 | - | 99 | 50.549 | Carlito_syrichta |
ENSG00000128394 | APOBEC3F | 99 | 67.000 | ENSCCAG00000030932 | - | 90 | 67.000 | Cebus_capucinus |
ENSG00000128394 | APOBEC3F | 98 | 87.500 | ENSCATG00000033502 | - | 95 | 87.500 | Cercocebus_atys |
ENSG00000128394 | APOBEC3F | 100 | 75.269 | ENSCATG00000043226 | APOBEC3C | 100 | 75.269 | Cercocebus_atys |
ENSG00000128394 | APOBEC3F | 100 | 81.818 | ENSCSAG00000006382 | APOBEC3F | 100 | 81.818 | Chlorocebus_sabaeus |
ENSG00000128394 | APOBEC3F | 100 | 73.656 | ENSCSAG00000006402 | APOBEC3C | 100 | 73.656 | Chlorocebus_sabaeus |
ENSG00000128394 | APOBEC3F | 100 | 88.204 | ENSCANG00000032904 | - | 100 | 88.204 | Colobus_angolensis_palliatus |
ENSG00000128394 | APOBEC3F | 98 | 86.413 | ENSCANG00000033269 | - | 99 | 86.413 | Colobus_angolensis_palliatus |
ENSG00000128394 | APOBEC3F | 100 | 76.882 | ENSCANG00000039177 | APOBEC3C | 100 | 76.882 | Colobus_angolensis_palliatus |
ENSG00000128394 | APOBEC3F | 100 | 82.114 | ENSCANG00000031957 | - | 99 | 82.114 | Colobus_angolensis_palliatus |
ENSG00000128394 | APOBEC3F | 96 | 34.153 | ENSDNOG00000044642 | - | 98 | 34.153 | Dasypus_novemcinctus |
ENSG00000128394 | APOBEC3F | 99 | 46.939 | ENSEASG00005018641 | - | 96 | 46.939 | Equus_asinus_asinus |
ENSG00000128394 | APOBEC3F | 99 | 49.730 | ENSECAG00000006071 | - | 100 | 44.536 | Equus_caballus |
ENSG00000128394 | APOBEC3F | 100 | 81.720 | ENSGGOG00000036587 | - | 100 | 81.720 | Gorilla_gorilla |
ENSG00000128394 | APOBEC3F | 100 | 95.442 | ENSGGOG00000038678 | APOBEC3F | 100 | 95.442 | Gorilla_gorilla |
ENSG00000128394 | APOBEC3F | 99 | 46.237 | ENSHGLG00000017315 | - | 91 | 46.237 | Heterocephalus_glaber_female |
ENSG00000128394 | APOBEC3F | 99 | 46.237 | ENSHGLG00100003105 | - | 94 | 46.237 | Heterocephalus_glaber_male |
ENSG00000128394 | APOBEC3F | 100 | 72.581 | ENSMFAG00000016792 | APOBEC3C | 100 | 72.581 | Macaca_fascicularis |
ENSG00000128394 | APOBEC3F | 100 | 87.936 | ENSMFAG00000004037 | APOBEC3F | 100 | 87.936 | Macaca_fascicularis |
ENSG00000128394 | APOBEC3F | 100 | 76.738 | ENSMFAG00000002331 | - | 100 | 76.738 | Macaca_fascicularis |
ENSG00000128394 | APOBEC3F | 98 | 73.370 | ENSMMUG00000004018 | APOBEC3C | 95 | 73.370 | Macaca_mulatta |
ENSG00000128394 | APOBEC3F | 100 | 87.263 | ENSMMUG00000004017 | APOBEC3F | 99 | 87.263 | Macaca_mulatta |
ENSG00000128394 | APOBEC3F | 100 | 75.335 | ENSMNEG00000043316 | APOBEC3D | 100 | 75.335 | Macaca_nemestrina |
ENSG00000128394 | APOBEC3F | 100 | 72.581 | ENSMNEG00000045196 | APOBEC3C | 100 | 72.581 | Macaca_nemestrina |
ENSG00000128394 | APOBEC3F | 100 | 87.668 | ENSMLEG00000029642 | APOBEC3F | 100 | 87.668 | Mandrillus_leucophaeus |
ENSG00000128394 | APOBEC3F | 100 | 75.806 | ENSMLEG00000036992 | APOBEC3C | 100 | 75.806 | Mandrillus_leucophaeus |
ENSG00000128394 | APOBEC3F | 99 | 55.676 | ENSMICG00000042615 | - | 89 | 55.676 | Microcebus_murinus |
ENSG00000128394 | APOBEC3F | 99 | 44.586 | ENSMLUG00000023676 | - | 99 | 44.586 | Myotis_lucifugus |
ENSG00000128394 | APOBEC3F | 100 | 71.762 | ENSNLEG00000035811 | - | 100 | 71.762 | Nomascus_leucogenys |
ENSG00000128394 | APOBEC3F | 100 | 75.806 | ENSNLEG00000028392 | APOBEC3C | 100 | 75.806 | Nomascus_leucogenys |
ENSG00000128394 | APOBEC3F | 98 | 45.055 | ENSOGAG00000033404 | - | 100 | 45.055 | Otolemur_garnettii |
ENSG00000128394 | APOBEC3F | 99 | 43.048 | ENSOGAG00000030300 | - | 99 | 43.048 | Otolemur_garnettii |
ENSG00000128394 | APOBEC3F | 99 | 45.431 | ENSOGAG00000032498 | - | 99 | 45.431 | Otolemur_garnettii |
ENSG00000128394 | APOBEC3F | 100 | 84.409 | ENSPPAG00000028218 | - | 100 | 84.409 | Pan_paniscus |
ENSG00000128394 | APOBEC3F | 100 | 79.032 | ENSPPAG00000014118 | APOBEC3C | 100 | 79.032 | Pan_paniscus |
ENSG00000128394 | APOBEC3F | 98 | 50.811 | ENSPPRG00000003726 | - | 98 | 50.811 | Panthera_pardus |
ENSG00000128394 | APOBEC3F | 100 | 96.515 | ENSPTRG00000014385 | APOBEC3C | 100 | 96.515 | Pan_troglodytes |
ENSG00000128394 | APOBEC3F | 100 | 83.871 | ENSPTRG00000041588 | APOBEC3D | 100 | 83.871 | Pan_troglodytes |
ENSG00000128394 | APOBEC3F | 100 | 86.863 | ENSPANG00000010775 | APOBEC3F | 100 | 86.863 | Papio_anubis |
ENSG00000128394 | APOBEC3F | 100 | 75.269 | ENSPPYG00000011832 | APOBEC3C | 100 | 75.269 | Pongo_abelii |
ENSG00000128394 | APOBEC3F | 68 | 58.140 | ENSPCOG00000022067 | - | 98 | 58.140 | Propithecus_coquereli |
ENSG00000128394 | APOBEC3F | 67 | 59.200 | ENSPCOG00000018072 | - | 95 | 59.200 | Propithecus_coquereli |
ENSG00000128394 | APOBEC3F | 81 | 49.593 | ENSPVAG00000009461 | - | 71 | 49.593 | Pteropus_vampyrus |
ENSG00000128394 | APOBEC3F | 100 | 82.842 | ENSRBIG00000042297 | - | 100 | 87.898 | Rhinopithecus_bieti |
ENSG00000128394 | APOBEC3F | 100 | 88.398 | ENSRBIG00000030323 | - | 100 | 88.398 | Rhinopithecus_bieti |
ENSG00000128394 | APOBEC3F | 100 | 80.435 | ENSRBIG00000030834 | - | 100 | 80.435 | Rhinopithecus_bieti |
ENSG00000128394 | APOBEC3F | 100 | 80.978 | ENSRROG00000028557 | - | 100 | 80.978 | Rhinopithecus_roxellana |
ENSG00000128394 | APOBEC3F | 100 | 82.842 | ENSRROG00000029996 | - | 100 | 82.842 | Rhinopithecus_roxellana |
ENSG00000128394 | APOBEC3F | 100 | 87.936 | ENSRROG00000029045 | APOBEC3C | 100 | 87.936 | Rhinopithecus_roxellana |
ENSG00000128394 | APOBEC3F | 100 | 71.242 | ENSSBOG00000032780 | - | 100 | 71.242 | Saimiri_boliviensis_boliviensis |
ENSG00000128394 | APOBEC3F | 89 | 46.961 | ENSUAMG00000004433 | - | 99 | 46.961 | Ursus_americanus |
ENSG00000128394 | APOBEC3F | 93 | 47.826 | ENSUMAG00000014441 | - | 86 | 47.826 | Ursus_maritimus |
ENSG00000128394 | APOBEC3F | 77 | 51.678 | ENSVVUG00000014628 | - | 91 | 51.370 | Vulpes_vulpes |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0000932 | P-body | 21873635. | IBA | Component |
GO:0000932 | P-body | 16699599.22915799. | IDA | Component |
GO:0002230 | positive regulation of defense response to virus by host | 17121840. | IDA | Process |
GO:0003723 | RNA binding | 22681889. | HDA | Function |
GO:0003723 | RNA binding | 21873635. | IBA | Function |
GO:0003723 | RNA binding | 11863358. | IDA | Function |
GO:0004126 | cytidine deaminase activity | 21873635. | IBA | Function |
GO:0004126 | cytidine deaminase activity | 17121840. | IDA | Function |
GO:0005515 | protein binding | 16699599.22915799. | IPI | Function |
GO:0005634 | nucleus | 21873635. | IBA | Component |
GO:0005737 | cytoplasm | 21873635. | IBA | Component |
GO:0005737 | cytoplasm | 16527742.16699599.21835787. | IDA | Component |
GO:0008270 | zinc ion binding | 11863358. | IDA | Function |
GO:0009972 | cytidine deamination | - | IEA | Process |
GO:0010529 | negative regulation of transposition | 21873635. | IBA | Process |
GO:0010529 | negative regulation of transposition | 16527742.20062055. | IDA | Process |
GO:0016553 | base conversion or substitution editing | 17121840. | IDA | Process |
GO:0016554 | cytidine to uridine editing | 21873635. | IBA | Process |
GO:0030895 | apolipoprotein B mRNA editing enzyme complex | 17121840. | TAS | Component |
GO:0042802 | identical protein binding | 23685212. | IPI | Function |
GO:0045071 | negative regulation of viral genome replication | 16378963.17121840. | IDA | Process |
GO:0045087 | innate immune response | 17121840. | IDA | Process |
GO:0045869 | negative regulation of single stranded viral RNA replication via double stranded DNA intermediate | 21873635. | IBA | Process |
GO:0045869 | negative regulation of single stranded viral RNA replication via double stranded DNA intermediate | 17121840.21835787. | IDA | Process |
GO:0048525 | negative regulation of viral process | 17121840. | IDA | Process |
GO:0051607 | defense response to virus | 21873635. | IBA | Process |
GO:0051607 | defense response to virus | 21835787.22915799. | IDA | Process |
GO:0070383 | DNA cytosine deamination | 21873635. | IBA | Process |
GO:0070383 | DNA cytosine deamination | 21835787. | IDA | Process |
GO:0080111 | DNA demethylation | 21873635. | IBA | Process |
GO:0080111 | DNA demethylation | 21496894. | IDA | Process |
GO:1990904 | ribonucleoprotein complex | 16699599. | IDA | Component |