EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
24983967	Trim28 contributes to EMT via regulation of E-cadherin and N-cadherin in lung cancer cell lines.	PLoS One	2014 Jul 1	Chen L	doi: 10.1371/journal.pone.0101040
27845900	TRIM28 multi-domain protein regulates cancer stem cell population in breast tumor development.	Oncotarget	2017 Jan 3	Czerwi??ska P	doi: 10.18632/oncotarget.13273.
27095111	KAP1 is overexpressed in hepatocellular carcinoma and its clinical significance.	Int J Clin Oncol	2016 Oct	Wang Y	-
28864417	TIF1β is phosphorylated at serine 473 in colorectal tumor cells through p38 mitogen-activated protein kinase as an oxidative defense mechanism.	Biochem Biophys Res Commun	2017 Oct 21	Shen LT	doi: 10.1016/j.bbrc.2017.08.117
30309319	Post-transcriptional regulation of cancer/testis antigen MAGEC2 expression by TRIM28 in tumor cells.	BMC Cancer	2018 Oct 11	Song X	doi: 10.1186/s12885-018-4844-1.
24861921	KAP-1 is overexpressed and correlates with increased metastatic ability and tumorigenicity in pancreatic cancer.	Med Oncol	2014 Jul	Yu C	doi: 10.1007/s12032-014-0025-5
27412325	Tripartite motif containing 28 (TRIM28) promotes breast cancer metastasis by stabilizing TWIST1 protein.	Sci Rep	2016 Jul 14	Wei C	doi: 10.1038/srep29822.
25421577	KAP1 promotes proliferation and metastatic progression of breast cancer cells.	Cancer Res	2015 Jan 15	Addison JB	doi: 10.1158/0008-5472.CAN-14-1561
23548070	Clinical utility of measuring expression levels of KAP1, TIMP1 and STC2 in peripheral blood of patients with gastric cancer.	World J Surg Oncol	2013 Apr 2	Wang YY	doi: 10.1186/1477-7819-11-81.
19898899	KAP1 is associated with peritoneal carcinomatosis in gastric cancer.	Ann Surg Oncol	2010 Mar	Yokoe T	doi: 10.1245/s10434-009-0795-8
22959342	TRIM28, a new molecular marker predicting metastasis and survival in early-stage non-small cell lung cancer.	Cancer Epidemiol	2013 Feb	Liu L	doi: 10.1016/j.canep.2012.08.005
25548895	High levels of KAP1 expression are associated with aggressive clinical features in ovarian cancer.	Int J Mol Sci	2014 Dec 26	Cui Y	doi: 10.3390/ijms16010363.
27364555	Metabolic Stress-Induced Phosphorylation of KAP1 Ser473 Blocks Mitochondrial Fusion in Breast Cancer Cells.	Cancer Res	2016 Sep 1	Cheng CT	doi: 10.1158/0008-5472.CAN-15-2921
28498400	TRIM28 knockdown increases sensitivity to etoposide by upregulating E2F1 in non-small cell lung cancer.	Oncol Rep	2017 Jun	Liu L	doi: 10.3892/or.2017.5638
29393469	TRIM28 promotes cervical cancer growth through the mTOR signaling pathway.	Oncol Rep	2018 Apr	Li F	doi: 10.3892/or.2018.6235
30479348	TRIM28 protects TRIM24 from SPOP-mediated degradation and promotes prostate cancer progression.	Nat Commun	2018 Nov 27	Fong KW	doi: 10.1038/s41467-018-07475-5.
29917268	KAP1 inhibits the Raf-MEK-ERK pathway to promote tumorigenesis in A549 lung cancer cells.	Mol Carcinog	2018 Oct	Wu GJ	doi: 10.1002/mc.22853

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq
BLCA	chr19	58545827	Silent	NA	L173L	0.26
BLCA	chr19	58547814	Nonsense_Mutation	novel	Q288*	0.18
BLCA	chr19	58549415	Missense_Mutation	NA	E583K	0.13
BLCA	chr19	58548326	Missense_Mutation	NA	M378I	0.07
BLCA	chr19	58547861	Missense_Mutation	novel	M303I	0.51
BLCA	chr19	58548124	Missense_Mutation	novel	A349T	0.26
BRCA	chr19	58548503	Missense_Mutation	rs759243122	R412C	0.29
BRCA	chr19	58547884	Missense_Mutation	novel	R311H	0.1
BRCA	chr19	58550603	3'UTR	novel		0.46
BRCA	chr19	58547456	Missense_Mutation	novel	S223G	0.16
BRCA	chr19	58550182	Silent	NA	I743I	0.49
BRCA	chr19	58545833	Missense_Mutation	NA	E175K	0.19
BRCA	chr19	58548320	Silent	NA	L376L	0.3
BRCA	chr19	58548579	Missense_Mutation	NA	S437C	0.2
BRCA	chr19	58549770	Silent	NA	L672L	0.48
CESC	chr19	58548085	Frame_Shift_Ins	novel	*K340Dfs19**	0.13
CESC	chr19	58549064	Missense_Mutation	novel	D496N	0.36
CESC	chr19	58545486	Missense_Mutation	NA	F134L	0.23
CESC	chr19	58550422	Missense_Mutation	novel	E793K	0.16
CESC	chr19	58548068	Missense_Mutation	novel	R330Q	0.38
CESC	chr19	58549800	Silent	NA	L682L	0.41
COAD	chr19	58549984	Silent	rs756462692	H714H	0.27
COAD	chr19	58550594	3'UTR	rs201545775		0.62
COAD	chr19	58549996	Silent	novel	R718R	0.23
COAD	chr19	58545477	Missense_Mutation	NA	E131D	0.32
COAD	chr19	58549995	Missense_Mutation	NA	R718H	0.06
COAD	chr19	58549496	Missense_Mutation	novel	G610C	0.36
COAD	chr19	58549953	Missense_Mutation	NA	C704Y	0.21
COAD	chr19	58548901	Missense_Mutation	novel	G467D	0.06
COAD	chr19	58549037	Nonsense_Mutation	NA	R487*	0.34
GBM	chr19	58547803	Missense_Mutation	novel	V284G	0.25
GBM	chr19	58548373	Missense_Mutation	novel	D394V	0.16
GBM	chr19	58547632	Missense_Mutation	novel	R253H	0.18
GBM	chr19	58549531	Silent	novel	L621L	0.04
HNSC	chr19	58549361	Missense_Mutation	novel	P565T	0.21
HNSC	chr19	58550476	Missense_Mutation	novel	E811Q	0.12
KIRC	chr19	58545771	Missense_Mutation	NA	T154S	0.21
KIRC	chr19	58549645	Silent	novel	V659V	0.1
KIRC	chr19	58548745	Missense_Mutation	NA	M443I	0.12
KIRP	chr19	58545496	Missense_Mutation	novel	S138G	0.41
KIRP	chr19	58550622	3'UTR	novel		0.19
KIRP	chr19	58545831	Missense_Mutation	NA	C174Y	0.38
LAML	chr19	58549105	Frame_Shift_Del	novel	*P510Qfs166**	0.3
LGG	chr19	58549651	Splice_Site	novel	X661_splice	0.47
LGG	chr19	58545874	Silent	novel	K188K	0.25
LGG	chr19	58550414	Missense_Mutation	rs373226669	R790H	0.35
LIHC	chr19	58547710	Missense_Mutation	novel	S279N	0.32
LIHC	chr19	58547463	Missense_Mutation	novel	D225V	0.22
LIHC	chr19	58548313	Missense_Mutation	NA	R374Q	0.28
LIHC	chr19	58549816	Missense_Mutation	NA	D688Y	0.84
LIHC	chr19	58545855	Missense_Mutation	NA	Q182R	0.4
LUAD	chr19	58548293	Splice_Site	novel	X368_splice	0.18
LUAD	chr19	58549232	Missense_Mutation	novel	I552V	0.11
LUAD	chr19	58549100	Missense_Mutation	NA	V508L	0.48
LUAD	chr19	58547811	Missense_Mutation	rs758388758	V287I	0.18
LUAD	chr19	58549436	Missense_Mutation	NA	P590S	0.16
LUAD	chr19	58550433	Missense_Mutation	novel	M796I	0.09
LUSC	chr19	58550017	Silent	novel	T725T	0.14
LUSC	chr19	58550467	Missense_Mutation	novel	V808L	0.25
LUSC	chr19	58550023	Silent	rs763622570	S727S	0.19
LUSC	chr19	58549416	Missense_Mutation	novel	E583V	0.25
LUSC	chr19	58549421	Missense_Mutation	novel	P585A	0.31
MESO	chr19	58550203	In_Frame_Del	novel	L751del	0.16
OV	chr19	58549051	Silent	novel	E491E	0.29
PRAD	chr19	58549051	Missense_Mutation	novel	E491D	0.21
PRAD	chr19	58547714	Splice_Site	novel	X280_splice	0.36
PRAD	chr19	58549378	Silent	rs373664048	E570E	0.31
PRAD	chr19	58549754	Missense_Mutation	rs767456825	S667L	0.42
READ	chr19	58549985	Missense_Mutation	rs780327650	E715K	0.31
READ	chr19	58550671	3'UTR	novel		0.4
READ	chr19	58549189	Silent	rs142762100	A537A	0.2
SKCM	chr19	58549428	Missense_Mutation	rs375189696	A587V	0.23
SKCM	chr19	58549510	Silent	NA	P614P	0.23
SKCM	chr19	58548545	Missense_Mutation	novel	P426S	0.24
SKCM	chr19	58547700	Missense_Mutation	novel	E276K	0.38
SKCM	chr19	58547399	Missense_Mutation	NA	E204K	0.69
SKCM	chr19	58547665	Missense_Mutation	NA	G264E	0.28
SKCM	chr19	58549052	Missense_Mutation	NA	R492C	0.45
SKCM	chr19	58548320	Silent	NA	L376L	0.22
SKCM	chr19	58550155	Silent	rs778163708	P734P	0.41
SKCM	chr19	58548520	Silent	NA	S417S	0.13
SKCM	chr19	58549216	Silent	novel	P546P	0.28
SKCM	chr19	58545791	Missense_Mutation	rs757143187	P161S	0.56
SKCM	chr19	58545792	Missense_Mutation	novel	P161L	0.56
SKCM	chr19	58550566	3'UTR	novel		0.6
SKCM	chr19	58547476	Silent	novel	C229C	0.38
STAD	chr19	58549052	Frame_Shift_Ins	novel	*R492Qfs9**	0.26
STAD	chr19	58550585	3'UTR	novel		0.21
STAD	chr19	58549554	Missense_Mutation	NA	R629H	0.87
STAD	chr19	58549117	Silent	novel	T513T	0.41
STAD	chr19	58549839	Missense_Mutation	NA	K695N	0.06
STAD	chr19	58550181	Missense_Mutation	NA	I743T	0.31
STAD	chr19	58545835	Silent	NA	E175E	0.11
STAD	chr19	58547815	Missense_Mutation	NA	Q288R	0.28
STAD	chr19	58550217	Missense_Mutation	novel	Y755C	0.35
STAD	chr19	58547459	Missense_Mutation	NA	C224R	0.29
STAD	chr19	58549161	Missense_Mutation	NA	A528D	0.26
STAD	chr19	58548737	Splice_Region	novel		0.11
STAD	chr19	58549331	Missense_Mutation	NA	E555Q	0.06
STAD	chr19	58548109	Missense_Mutation	NA	H344Y	0.12
TGCT	chr19	58549101	Missense_Mutation	novel	V508D	0.21
THCA	chr19	58548911	Splice_Site	novel	X470_splice	0.17
UCEC	chr19	58549147	Silent	NA	E523E	0.22
UCEC	chr19	58548151	Missense_Mutation	novel	N358D	0.42
UCEC	chr19	58549651	Splice_Site	novel	X661_splice	0.32
UCEC	chr19	58548398	Silent	rs142842422	A402A	0.2
UCEC	chr19	58549985	Missense_Mutation	rs780327650	E715K	0.19
UCEC	chr19	58547714	Splice_Site	novel	X280_splice	0.4
UCEC	chr19	58549574	Missense_Mutation	novel	D636N	0.47
UCEC	chr19	58550523	Silent	novel	E826E	0.35
UCEC	chr19	58550703	3'UTR	novel		0.5
UCEC	chr19	58549962	Missense_Mutation	NA	V707A	0.23
UCEC	chr19	58549594	Silent	NA	Q642Q	0.18
UCEC	chr19	58545477	Silent	NA	E131E	0.12
UCEC	chr19	58547841	Missense_Mutation	NA	M297V	0.11
UCEC	chr19	58545897	Splice_Site	novel	X196_splice	0.06
UCEC	chr19	58545477	Missense_Mutation	NA	E131D	0.25
UCEC	chr19	58548314	Silent	NA	R374R	0.49
UCEC	chr19	58548354	Missense_Mutation	novel	E388K	0.35
UCEC	chr19	58550513	Missense_Mutation	novel	S823I	0.4
UCEC	chr19	58549751	Missense_Mutation	novel	C666Y	0.3
UCEC	chr19	58550391	Silent	novel	V782V	0.35
UCEC	chr19	58547462	Missense_Mutation	NA	D225N	0.32
UCEC	chr19	58547658	Missense_Mutation	rs775103162	R262C	0.46
UCEC	chr19	58549460	Missense_Mutation	novel	S598G	0.38
UCEC	chr19	58549844	Nonsense_Mutation	NA	S697*	0.24
UCEC	chr19	58545875	Missense_Mutation	novel	D189N	0.39
UCEC	chr19	58547461	Silent	novel	C224C	0.49
UCEC	chr19	58545827	Missense_Mutation	novel	L173M	0.44
UCEC	chr19	58547851	Missense_Mutation	NA	L300Q	0.47
UCEC	chr19	58548085	Missense_Mutation	novel	T336S	0.04
UCEC	chr19	58548993	Missense_Mutation	novel	R472H	0.31
UCEC	chr19	58549189	Silent	rs142762100	A537A	0.37
UCEC	chr19	58549854	Silent	novel	N700N	0.41
UCEC	chr19	58550183	Missense_Mutation	novel	R744C	0.17
UCEC	chr19	58549858	Missense_Mutation	NA	R702W	0.23
UCEC	chr19	58549178	Missense_Mutation	novel	P534S	0.33
UCEC	chr19	58550253	Missense_Mutation	rs200494482	R767H	0.26
UCEC	chr19	58550436	Silent	rs375142648	N797N	0.24
UCEC	chr19	58547698	Missense_Mutation	novel	K275T	0.06
UCEC	chr19	58545466	Missense_Mutation	NA	D128Y	0.33
UCEC	chr19	58549236	Missense_Mutation	novel	V553A	0.32
UCEC	chr19	58549574	Missense_Mutation	novel	D636N	0.37
UCEC	chr19	58549468	Silent	rs770754268	S600S	0.39
UCEC	chr19	58549417	Missense_Mutation	novel	E583D	0.1
UCEC	chr19	58548323	Silent	novel	K377K	0.37
UCEC	chr19	58549946	Splice_Region	rs111572652		0.37
UCEC	chr19	58549440	Missense_Mutation	novel	R591H	0.19

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
CESC	DEL	0.0712	0.027508
HNSC	DEL	0.1169	0.20195
KIRP	DEL	0.0451	0.054726
OV	DEL	0.4456	8.1256e-19
PAAD	DEL	0.0652	0.035089
READ	DEL	0.097	0.23023
SARC	DEL	0.3074	6.413e-12
TGCT	DEL	0.28	0.0046229
UCEC	DEL	0.1076	0.0003803
UCS	DEL	0.1964	0.12448

Survival Analysis

Cancer	P-value	Q-value
THYM	0.0045	Kaplan-Meier Survival Analysis
STAD	0.033	Kaplan-Meier Survival Analysis
MESO	0.0001	Kaplan-Meier Survival Analysis
ACC	0.00011	Kaplan-Meier Survival Analysis
SKCM	0.0001	Kaplan-Meier Survival Analysis
KIRP	0.0058	Kaplan-Meier Survival Analysis
PAAD	0.011	Kaplan-Meier Survival Analysis
LIHC	0.00013	Kaplan-Meier Survival Analysis
DLBC	0.018	Kaplan-Meier Survival Analysis
LGG	0.0079	Kaplan-Meier Survival Analysis
LUAD	0.00016	Kaplan-Meier Survival Analysis
UVM	0.005	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBPome

Literatures

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSG00000130726 (Gene tree)
Gene ID: 10155
Gene Symbol: TRIM28
Alias: TIF1B|KAP1|TF1B|RNF96|PPP1R157
Full Name: tripartite motif containing 28
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 6,632 bases
Position: chr19:58,544,091-58,550,722
Accession: 16384
RBP type: non-canonical RBP
Summary: The protein encoded by this gene mediates transcriptional control by interaction with the Kruppel-associated box repression domain found in many transcription factors. The protein localizes to the nucleus and is thought to associate with specific chromatin regions. The protein is a member of the tripartite motif family. This tripartite motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. [provided by RefSeq, Jul 2008]

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	NascentRICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
29937225	A LINE1-Nucleolin Partnership Regulates Early Development and ESC Identity.	Cell	2018 Jul 12	Percharde M	doi: 10.1016/j.cell.2018.05.043

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000595028	TRIM28-205	486	-	-	- (aa)	-	-
ENST00000597618	TRIM28-210	609	-	-	- (aa)	-	-
ENST00000597995	TRIM28-212	702	-	-	- (aa)	-	-
ENST00000253024	TRIM28-201	2960	XM_024451309	ENSP00000253024	835 (aa)	XP_024307077	Q13263
ENST00000598355	TRIM28-213	714	-	-	- (aa)	-	-
ENST00000593582	TRIM28-203	533	-	ENSP00000472586	162 (aa)	-	M0R2I3
ENST00000597136	TRIM28-207	1552	-	ENSP00000471303	460 (aa)	-	M0R0K9
ENST00000594806	TRIM28-204	861	-	ENSP00000473126	178 (aa)	-	M0R3C0
ENST00000597423	TRIM28-209	733	-	-	- (aa)	-	-
ENST00000595974	TRIM28-206	665	-	-	- (aa)	-	-
ENST00000597172	TRIM28-208	577	-	-	- (aa)	-	-
ENST00000597968	TRIM28-211	504	-	ENSP00000470503	61 (aa)	-	M0QZE6
ENST00000601150	TRIM28-215	915	-	-	- (aa)	-	-
ENST00000341753	TRIM28-202	2709	-	ENSP00000342232	753 (aa)	-	Q13263
ENST00000600840	TRIM28-214	338	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000130726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000130726's network

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000785	chromatin	21873635.	IBA	Component
GO:0001837	epithelial to mesenchymal transition	-	ISS	Process
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003677	DNA binding	9016654.	IDA	Function
GO:0003682	chromatin binding	27029610.	IDA	Function
GO:0003713	transcription coactivator activity	-	ISS	Function
GO:0003714	transcription corepressor activity	21873635.	IBA	Function
GO:0003714	transcription corepressor activity	8769649.	IDA	Function
GO:0003723	RNA binding	22681889.	HDA	Function
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004842	ubiquitin-protein transferase activity	21873635.	IBA	Function
GO:0004842	ubiquitin-protein transferase activity	18082607.	IDA	Function
GO:0005515	protein binding	10330177.11013263.16169070.17704056.18060868.18675275.18854139.19498464.20424263.20562864.20858735.20864041.20936779.21170338.21277283.21549307.21642969.21888893.23543754.23665872.24018422.24657165.26496610.27029610.27123980.27705803.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	8769649.9016654.	IDA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	IDA	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005719	nuclear euchromatin	-	IEA	Component
GO:0005720	nuclear heterochromatin	-	IEA	Component
GO:0006281	DNA repair	17178852.	IDA	Process
GO:0006325	chromatin organization	-	IEA	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	-	TAS	Process
GO:0007265	Ras protein signal transduction	24623306.	IMP	Process
GO:0007566	embryo implantation	-	IEA	Process
GO:0008270	zinc ion binding	10653693.11226167.	IDA	Function
GO:0016032	viral process	-	IEA	Process
GO:0016567	protein ubiquitination	-	IEA	Process
GO:0016925	protein sumoylation	21873635.	IBA	Process
GO:0016925	protein sumoylation	18082607.	IDA	Process
GO:0016925	protein sumoylation	-	IEA	Process
GO:0019789	SUMO transferase activity	17298944.	EXP	Function
GO:0031625	ubiquitin protein ligase binding	18082607.	IDA	Function
GO:0035851	Krueppel-associated box domain binding	23665872.	IDA	Function
GO:0042307	positive regulation of protein import into nucleus	23665872.	IDA	Process
GO:0043045	DNA methylation involved in embryo development	-	IEA	Process
GO:0043388	positive regulation of DNA binding	-	IEA	Process
GO:0043565	sequence-specific DNA binding	-	ISS	Function
GO:0045087	innate immune response	18248090.	IDA	Process
GO:0045739	positive regulation of DNA repair	17178852.	IDA	Process
GO:0045869	negative regulation of single stranded viral RNA replication via double stranded DNA intermediate	-	IEA	Process
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045892	negative regulation of transcription, DNA-templated	9016654.	IDA	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	ISS	Process
GO:0046777	protein autophosphorylation	-	IEA	Process
GO:0051259	protein complex oligomerization	17512541.	IDA	Process
GO:0060028	convergent extension involved in axis elongation	-	IEA	Process
GO:0060669	embryonic placenta morphogenesis	-	IEA	Process
GO:0070087	chromo shadow domain binding	15882967.	IPI	Function
GO:0090309	positive regulation of methylation-dependent chromatin silencing	24623306.	IMP	Process
GO:0090309	positive regulation of methylation-dependent chromatin silencing	-	ISS	Process
GO:0090575	RNA polymerase II transcription factor complex	21873635.	IBA	Component
GO:0090575	RNA polymerase II transcription factor complex	-	ISS	Component
GO:1901536	negative regulation of DNA demethylation	-	IEA	Process
GO:1902187	negative regulation of viral release from host cell	18248090.	IDA	Process
GO:1990841	promoter-specific chromatin binding	21873635.	IBA	Function
GO:1990841	promoter-specific chromatin binding	24623306.	IDA	Function
GO:2000653	regulation of genetic imprinting	-	IEA	Process

EuRBPDB

Note: to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBPome

Literatures

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.