EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
24643682	Overexpression of HCC1/CAPERα may play a role in lung cancer carcinogenesis.	Tumour Biol	2014 Jul	Chai Y	doi: 10.1007/s13277-014-1819-y
24621503	CAPER, a novel regulator of human breast cancer progression.	Cell Cycle	2014	Mercier I	doi: 10.4161/cc.28156
19342371	Genetic ablation of caveolin-1 drives estrogen-hypersensitivity and the development of DCIS-like mammary lesions.	Am J Pathol	2009 Apr	Mercier I	doi: 10.2353/ajpath.2009.080882.

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
ACC	chr20	35704486	Silent	novel	R530R	0.06
ACC	chr20	35713025	Missense_Mutation	novel	V390L	0.38
ACC	chr20	35740397	Intron	novel		0.23
BLCA	chr20	35739067	Intron	novel		0.2
BLCA	chr20	35707149	Missense_Mutation	NA	F426L	0.18
BLCA	chr20	35724649	Missense_Mutation	NA	D203G	0.29	RRM_1
BLCA	chr20	35704582	Splice_Site	novel	X498_splice	0.4
BLCA	chr20	35704444	3'UTR	novel		0.4
BLCA	chr20	35704475	3'UTR	novel		0.06
BLCA	chr20	35739005	Nonsense_Mutation	novel	*L22Efs3**	0.09
BLCA	chr20	35714282	Silent	novel	S333S	0.17
BLCA	chr20	35725130	Missense_Mutation	novel	E148K	0.18
BLCA	chr20	35724588	Silent	novel	I223I	0.08
BLCA	chr20	35734942	Intron	novel		0.22
BLCA	chr20	35729525	Missense_Mutation	novel	S100F	0.17
BLCA	chr20	35738984	Missense_Mutation	novel	E29K	0.88
BRCA	chr20	35705232	Missense_Mutation	NA	S469L	0.17
BRCA	chr20	35705252	Missense_Mutation	novel	H462Q	0.1
BRCA	chr20	35740880	5'UTR	novel		0.17
BRCA	chr20	35724651	Silent	rs771075927	V202V	0.23
BRCA	chr20	35709264	Frame_Shift_Del	NA	*F395Cfs13**	0.33
BRCA	chr20	35714286	Missense_Mutation	NA	A332D	0.2
BRCA	chr20	35725120	Missense_Mutation	NA	D151V	0.17
BRCA	chr20	35732212	Intron	novel		0.2
CESC	chr20	35740586	Intron	novel		0.28
CESC	chr20	35739037	Intron	NA		0.55
CESC	chr20	35739322	Intron	novel		0.19
CESC	chr20	35739684	Intron	novel		0.21
CESC	chr20	35729343	Missense_Mutation	novel	S129G	0.12
CESC	chr20	35704272	3'UTR	novel		0.19
CESC	chr20	35703735	3'UTR	novel		0.13
CESC	chr20	35704435	3'UTR	novel		0.13
CESC	chr20	35709307	Intron	NA		0.13
CESC	chr20	35740385	Intron	novel		0.44
CESC	chr20	35739448	Intron	novel		0.16
CESC	chr20	35716785	Missense_Mutation	NA	M282I	0.27
CESC	chr20	35742106	5'Flank	novel		0.22
CESC	chr20	35739214	Intron	novel		0.06
CESC	chr20	35739987	Intron	novel		0.23
CESC	chr20	35741954	5'Flank	novel		0.29
CESC	chr20	35729498	Missense_Mutation	NA	R109Q	0.27
CESC	chr20	35739170	Intron	novel		0.33
CESC	chr20	35740193	Intron	novel		0.23
CESC	chr20	35703713	3'UTR	novel		0.12
CESC	chr20	35703735	3'UTR	novel		0.3
CESC	chr20	35739684	Intron	novel		0.15
COAD	chr20	35732118	Missense_Mutation	NA	S40N	0.39
COAD	chr20	35739051	Intron	novel		0.23
COAD	chr20	35729498	Missense_Mutation	NA	R109Q	0.09
COAD	chr20	35716801	Missense_Mutation	novel	E277G	0.22
COAD	chr20	35735034	Intron	rs769659620		0.25
COAD	chr20	35725084	Missense_Mutation	novel	R163I	0.25	RRM_1
COAD	chr20	35739684	Intron	novel		0.29
COAD	chr20	35707203	Splice_Region	rs757995188		0.33
COAD	chr20	35739449	Intron	novel		0.32
COAD	chr20	35704445	3'UTR	rs773524233		0.3
COAD	chr20	35714233	Missense_Mutation	NA	D350Y	0.34
COAD	chr20	35740782	Intron	novel		0.05
COAD	chr20	35740688	Intron	novel		0.07
DLBC	chr20	35740522	Intron	novel		0.25
DLBC	chr20	35740680	Intron	novel		0.37
DLBC	chr20	35705240	Missense_Mutation	novel	D466E	0.25
ESCA	chr20	35742134	5'Flank	novel		0.26
GBM	chr20	35725143	Missense_Mutation	NA	D143E	0.27
GBM	chr20	35729361	Silent	novel	R123R	0.08
GBM	chr20	35716747	Missense_Mutation	novel	F295C	0.45
GBM	chr20	35731977	Missense_Mutation	novel	R87Q	0.2
GBM	chr20	35729519	Missense_Mutation	novel	P102Q	0.04
GBM	chr20	35714304	Missense_Mutation	novel	V326A	0.51
GBM	chr20	35731990	Missense_Mutation	rs759361589	R83C	0.39
GBM	chr20	35740735	Intron	novel		0.11
HNSC	chr20	35714277	Missense_Mutation	novel	A335V	0.34
HNSC	chr20	35714223	Missense_Mutation	NA	T353I	0.11
HNSC	chr20	35704735	Silent	novel	Y475Y	0.12
HNSC	chr20	35732188	Intron	novel		0.35
KIRC	chr20	35721798	Frame_Shift_Del	novel	*S256Yfs6**	0.26
KIRC	chr20	35732125	Missense_Mutation	NA	S38G	0.25
KIRC	chr20	35724609	Silent	NA	Q216Q	0.33
KIRC	chr20	35704689	Silent	NA	L491L	0.19
KIRC	chr20	35734919	Intron	novel		0.4
KIRC	chr20	35731995	Missense_Mutation	NA	R81Q	0.33
KIRP	chr20	35725121	Missense_Mutation	novel	D151H	0.61
KIRP	chr20	35739156	Intron	rs555978781		0.19
KIRP	chr20	35740772	Intron	novel		0.17
LGG	chr20	35732067	Missense_Mutation	NA	R57Q	0.38
LGG	chr20	35704410	3'UTR	novel		0.23
LIHC	chr20	35724573	Silent	NA	S228S	0.61
LIHC	chr20	35704694	Missense_Mutation	rs199587566	N489S	0.45
LIHC	chr20	35739003	Silent	novel	L22L	0.06
LIHC	chr20	35732068	Nonsense_Mutation	NA	R57*	0.32
LUAD	chr20	35714222	Silent	novel	T353T	0.11
LUAD	chr20	35721836	Silent	novel	Q243Q	0.37
LUAD	chr20	35729491	Missense_Mutation	novel	K111N	0.04
LUAD	chr20	35704475	3'UTR	novel		0.2
LUAD	chr20	35714343	Missense_Mutation	novel	G313V	0.11
LUAD	chr20	35707136	Missense_Mutation	NA	M431V	0.25
LUSC	chr20	35740823	Splice_Site	novel	X17_splice	0.29
LUSC	chr20	35714233	Missense_Mutation	novel	D350N	0.81
LUSC	chr20	35714233	Missense_Mutation	NA	D350H	0.11
LUSC	chr20	35709227	Missense_Mutation	novel	E408K	0.11
OV	chr20	35721827	Silent	NA	S246S	0.21
OV	chr20	35739026	Intron	novel		0.38
OV	chr20	35713045	Missense_Mutation	NA	G383A	0.11
PAAD	chr20	35731998	Missense_Mutation	rs760812573	R80Q	0.19
PRAD	chr20	35724578	Missense_Mutation	NA	A227T	0.23
PRAD	chr20	35721846	Missense_Mutation	novel	N240S	0.36
PRAD	chr20	35739047	Intron	novel		0.37
READ	chr20	35740682	Intron	novel		0.2
READ	chr20	35704272	3'UTR	novel		0.75
READ	chr20	35714376	Missense_Mutation	novel	E302G	0.42
READ	chr20	35732313	Intron	novel		0.78
READ	chr20	35738981	Nonsense_Mutation	novel	E30*	0.31
READ	chr20	35716755	Silent	NA	G292G	0.13
READ	chr20	35732153	Intron	novel		0.36
SKCM	chr20	35734983	Intron	rs767969223		0.25
SKCM	chr20	35724654	Silent	rs151187023	F201F	0.34
SKCM	chr20	35704512	Missense_Mutation	NA	A521V	0.33
SKCM	chr20	35704422	3'UTR	novel		0.35
SKCM	chr20	35739094	Intron	novel		0.37
SKCM	chr20	35729340	Missense_Mutation	NA	P130S	0.14
SKCM	chr20	35732194	Intron	novel		0.17
STAD	chr20	35709232	Missense_Mutation	NA	Q406R	0.06
STAD	chr20	35707123	Missense_Mutation	NA	Q435R	0.14
STAD	chr20	35739021	Splice_Region	novel		0.07
STAD	chr20	35732091	Missense_Mutation	novel	R49T	0.06
STAD	chr20	35724682	Missense_Mutation	NA	R192L	0.05	RRM_1
STAD	chr20	35704365	3'UTR	novel		0.18
STAD	chr20	35724588	Missense_Mutation	novel	I223M	0.05
STAD	chr20	35713083	Silent	novel	Q370Q	0.1
STAD	chr20	35713032	Silent	NA	F387F	0.45
STAD	chr20	35725090	Missense_Mutation	NA	A161V	0.1	RRM_1
TGCT	chr20	35713060	Missense_Mutation	novel	A378V	0.42
TGCT	chr20	35740774	Intron	novel		0.37
THYM	chr20	35707162	Missense_Mutation	novel	A422E	0.38
UCEC	chr20	35714220	Missense_Mutation	novel	T354I	0.5
UCEC	chr20	35724654	Silent	rs151187023	F201F	0.32
UCEC	chr20	35740206	Intron	novel		0.38
UCEC	chr20	35740728	Intron	novel		0.11
UCEC	chr20	35738974	Missense_Mutation	novel	S32T	0.43
UCEC	chr20	35729351	Missense_Mutation	NA	R126Q	0.17
UCEC	chr20	35704510	Missense_Mutation	rs748585138	T522A	0.47
UCEC	chr20	35739195	Intron	novel		0.29
UCEC	chr20	35740465	Intron	novel		0.36
UCEC	chr20	35742115	5'Flank	novel		0.58
UCEC	chr20	35739162	Intron	novel		0.38
UCEC	chr20	35742110	5'Flank	novel		0.26
UCEC	chr20	35704320	3'UTR	novel		0.38
UCEC	chr20	35731999	Nonsense_Mutation	novel	R80*	0.36
UCEC	chr20	35704372	3'UTR	novel		0.32
UCEC	chr20	35725132	Missense_Mutation	NA	P147H	0.25
UCEC	chr20	35731956	Missense_Mutation	NA	R94H	0.23
UCEC	chr20	35739096	Intron	novel		0.05
UCEC	chr20	35739096	Intron	novel		0.07
UCEC	chr20	35705238	Missense_Mutation	NA	K467R	0.25
UCEC	chr20	35704343	3'UTR	novel		0.45
UCEC	chr20	35740816	Splice_Region	novel		0.47
UCEC	chr20	35725084	Missense_Mutation	novel	R163I	0.23	RRM_1
UCEC	chr20	35732067	Missense_Mutation	NA	R57Q	0.42
UCEC	chr20	35740273	Intron	novel		0.33
UCEC	chr20	35739167	Intron	novel		0.38
UCEC	chr20	35742021	5'Flank	novel		0.21
UCEC	chr20	35740477	Intron	novel		0.3
UCEC	chr20	35739093	Intron	novel		0.22
UCEC	chr20	35740337	Intron	novel		0.34
UCEC	chr20	35704464	3'UTR	novel		0.43
UCEC	chr20	35709270	Missense_Mutation	novel	F393L	0.37
UCEC	chr20	35742116	5'Flank	novel		0.39
UCEC	chr20	35704417	3'UTR	novel		0.45
UCEC	chr20	35739228	Intron	novel		0.16
UCEC	chr20	35732143	Intron	novel		0.32
UCEC	chr20	35739833	Intron	novel		0.52
UCEC	chr20	35714223	Missense_Mutation	NA	T353I	0.43
UCEC	chr20	35735056	Intron	novel		0.46
UCEC	chr20	35740508	Intron	novel		0.53
UCEC	chr20	35740607	Intron	novel		0.54
UCEC	chr20	35740699	Intron	novel		0.36
UCEC	chr20	35739096	Intron	novel		0.08
UCEC	chr20	35703638	3'UTR	novel		0.24
UCEC	chr20	35703683	3'UTR	novel		0.17
UCEC	chr20	35704435	3'UTR	novel		0.2
UCEC	chr20	35724654	Silent	rs151187023	F201F	0.45
UCEC	chr20	35732153	Intron	novel		0.33
UCEC	chr20	35704290	3'UTR	novel		0.24
UCEC	chr20	35732125	Frame_Shift_Del	NA	*S38Afs83**	0.33
UCEC	chr20	35707204	Splice_Region	novel		0.64
UCEC	chr20	35731995	Missense_Mutation	NA	R81Q	0.26
UCEC	chr20	35714223	Missense_Mutation	NA	T353I	0.29
UCEC	chr20	35734213	Intron	novel		0.71
UCEC	chr20	35714223	Missense_Mutation	NA	T353I	0.31
UCEC	chr20	35739641	Intron	novel		0.08
UCEC	chr20	35739759	Intron	novel		0.3
UCEC	chr20	35740001	Intron	novel		0.29
UCEC	chr20	35740211	Intron	novel		0.39
UCEC	chr20	35739750	Intron	novel		0.25
UCEC	chr20	35709259	Frame_Shift_Ins	NA	*I397Nfs12**	0.35
UCEC	chr20	35734185	Intron	novel		0.17
UCEC	chr20	35714295	Missense_Mutation	novel	R329H	0.24
UCEC	chr20	35740450	Intron	novel		0.38
UCEC	chr20	35704716	Missense_Mutation	NA	A482S	0.31
UCEC	chr20	35709257	Missense_Mutation	novel	D398Y	0.21
UCEC	chr20	35714223	Missense_Mutation	NA	T353I	0.32
UCEC	chr20	35739096	Intron	novel		0.06
UCEC	chr20	35739589	Intron	novel		0.37
UCEC	chr20	35714223	Missense_Mutation	NA	T353I	0.34
UCEC	chr20	35731996	Missense_Mutation	rs528815171	R81W	0.08
UCEC	chr20	35739051	Intron	novel		0.07
UCEC	chr20	35739113	Intron	novel		0.04
UCEC	chr20	35729327	Missense_Mutation	novel	D134V	0.33
UCEC	chr20	35714251	Missense_Mutation	NA	L344V	0.37
UCEC	chr20	35732124	Missense_Mutation	novel	S38N	0.39
UCEC	chr20	35714223	Missense_Mutation	NA	T353I	0.32
UCEC	chr20	35721766	Missense_Mutation	novel	R267C	0.08
UCEC	chr20	35704444	3'UTR	rs772464305		0.28
UCEC	chr20	35739096	Intron	novel		0.08
UCEC	chr20	35704316	3'UTR	novel		0.5
UCEC	chr20	35729362	Silent	novel	R122R	0.2
UCEC	chr20	35732175	Intron	novel		0.15
UCEC	chr20	35740041	Intron	novel		0.39
UCEC	chr20	35714244	Missense_Mutation	novel	R346M	0.08
UCEC	chr20	35703612	3'UTR	novel		0.36
UCEC	chr20	35724578	Missense_Mutation	NA	A227T	0.5
UCEC	chr20	35734983	Intron	rs767969223		0.39
UCEC	chr20	35739799	Intron	novel		0.35
UCEC	chr20	35741972	5'Flank	novel		0.35
UCEC	chr20	35738978	Missense_Mutation	novel	R31C	0.35

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
LAML	DEL	0.0157	0.14746

Survival Analysis

Cancer	P-value	Q-value
THYM	0.01	Kaplan-Meier Survival Analysis
KIRC	0.00019	Kaplan-Meier Survival Analysis
SARC	0.0054	Kaplan-Meier Survival Analysis
MESO	0.047	Kaplan-Meier Survival Analysis
ACC	0.022	Kaplan-Meier Survival Analysis
SKCM	0.0013	Kaplan-Meier Survival Analysis
PRAD	0.008	Kaplan-Meier Survival Analysis
ESCA	0.0075	Kaplan-Meier Survival Analysis
PAAD	0.031	Kaplan-Meier Survival Analysis
PCPG	0.0044	Kaplan-Meier Survival Analysis
BLCA	0.0022	Kaplan-Meier Survival Analysis
LAML	0.0051	Kaplan-Meier Survival Analysis
LIHC	0.0085	Kaplan-Meier Survival Analysis
LGG	0.031	Kaplan-Meier Survival Analysis
LUAD	0.044	Kaplan-Meier Survival Analysis
UVM	0.009	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000131051 (Gene tree)
Gene ID: 9584
Gene Symbol: RBM39
Alias: CC1.3|HCC1|CAPER|fSAP59|CAPERalpha|RNPC2
Full Name: RNA binding motif protein 39
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 40,990 bases
Position: chr20:35,701,347-35,742,336
Accession: 15923
RBP type: canonical RBP
Summary: This gene encodes a member of the U2AF65 family of proteins. The encoded protein is found in the nucleus, where it co-localizes with core spliceosomal proteins. It has been shown to play a role in both steroid hormone receptor-mediated transcription and alternative splicing, and it is also a transcriptional coregulator of the viral oncoprotein v-Rel. Multiple transcript variants have been observed for this gene. A related pseudogene has been identified on chromosome X. [provided by RefSeq, Aug 2011]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000436747	RRM_1	PF00076.22	2.2e-41	1	2
ENSP00000436747	RRM_1	PF00076.22	2.2e-41	2	2
ENSP00000253363	RRM_1	PF00076.22	2.6e-41	1	2
ENSP00000253363	RRM_1	PF00076.22	2.6e-41	2	2
ENSP00000354437	RRM_1	PF00076.22	3.6e-41	1	2
ENSP00000354437	RRM_1	PF00076.22	3.6e-41	2	2
ENSP00000394824	RRM_1	PF00076.22	4.7e-22	1	1
ENSP00000363150	RRM_1	PF00076.22	1e-10	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	NascentRICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
27418600	Severe muscle wasting and denervation in mice lacking the RNA-binding protein ZFP106.	Proc Natl Acad Sci U S A	2016 Aug 2	Anderson DM	doi: 10.1073/pnas.1608423113
28302793	Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.	Science	2017 Apr 28	Han T	doi: 10.1126/science.aal3755
31289203	Hypoxia-induced long non-coding RNA DARS-AS1 regulates RBM39 stability to promote myeloma malignancy.	Haematologica	2019 Jul 9	Tong J	doi: 10.3324/haematol.2019.218289
22125086	The defective splicing caused by the ISCU intron mutation in patients with myopathy with lactic acidosis is repressed by PTBP1 but can be derepressed by IGF2BP1.	Hum Mutat	2012 Mar	Nordin A	doi: 10.1002/humu.22002
25058583	Proteomic landscape of the human choroid-retinal pigment epithelial complex.	JAMA Ophthalmol	2014 Nov	Skeie JM	doi: 10.1001/jamaophthalmol.2014.2065.
27050129	UHM-ULM interactions in the RBM39-U2AF65 splicing-factor complex.	Acta Crystallogr D Struct Biol	2016 Apr	Stepanyuk GA	doi: 10.1107/S2059798316001248
27354116	Global regulation of alternative RNA splicing by the SR-rich protein RBM39.	Biochim Biophys Acta	2016 Aug	Mai S	doi: 10.1016/j.bbagrm.2016.06.007
28543982	The RNA-binding protein caper is required for sensory neuron development in Drosophila melanogaster.	Dev Dyn	2017 Aug	Olesnicky EC	doi: 10.1002/dvdy.24523
30889374	No Matter How You Splice It, RBM39 Inhibition Targets Spliceosome Mutant AML.	Cancer Cell	2019 Mar 18	Thomas R	doi: 10.1016/j.ccell.2019.02.013.

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000434927	RBM39-214	716	-	ENSP00000393493	193 (aa)	-	Q5QP22
ENST00000482563	RBM39-233	1737	-	-	- (aa)	-	-
ENST00000361162	RBM39-203	2831	-	ENSP00000354437	524 (aa)	-	Q14498
ENST00000425184	RBM39-210	526	-	ENSP00000389459	23 (aa)	-	H7BZG3
ENST00000449489	RBM39-218	432	-	ENSP00000390303	40 (aa)	-	F2Z3E6
ENST00000433027	RBM39-213	611	-	ENSP00000407466	39 (aa)	-	F8WF24
ENST00000498280	RBM39-242	444	-	-	- (aa)	-	-
ENST00000528062	RBM39-243	2421	XM_006723890	ENSP00000436747	508 (aa)	XP_006723953	Q14498
ENST00000490484	RBM39-236	871	-	ENSP00000489005	245 (aa)	-	A0A0U1RQH7
ENST00000468086	RBM39-226	549	-	-	- (aa)	-	-
ENST00000639702	RBM39-245	5914	-	-	- (aa)	-	-
ENST00000416529	RBM39-209	594	-	ENSP00000407150	62 (aa)	-	F8WF73
ENST00000453310	RBM39-219	1068	-	ENSP00000397443	40 (aa)	-	F2Z3E6
ENST00000455343	RBM39-220	441	-	ENSP00000395563	40 (aa)	-	F2Z3E6
ENST00000429968	RBM39-212	2149	-	ENSP00000395124	47 (aa)	-	F2Z2Z5
ENST00000442447	RBM39-215	644	-	-	- (aa)	-	-
ENST00000465158	RBM39-225	825	-	-	- (aa)	-	-
ENST00000338163	RBM39-202	2792	-	ENSP00000344581	423 (aa)	-	G3XAC6
ENST00000477334	RBM39-231	949	-	-	- (aa)	-	-
ENST00000444878	RBM39-216	2124	-	ENSP00000394602	40 (aa)	-	F2Z3E6
ENST00000493853	RBM39-238	567	-	-	- (aa)	-	-
ENST00000374038	RBM39-204	1026	-	ENSP00000363150	231 (aa)	-	Q5QP23
ENST00000494274	RBM39-239	704	-	-	- (aa)	-	-
ENST00000412738	RBM39-207	1018	-	ENSP00000397917	40 (aa)	-	F2Z3E6
ENST00000495293	RBM39-240	759	-	-	- (aa)	-	-
ENST00000403542	RBM39-206	2883	-	ENSP00000385977	40 (aa)	-	F2Z3E6
ENST00000476806	RBM39-230	754	-	ENSP00000483837	59 (aa)	-	A0A087X122
ENST00000496183	RBM39-241	632	-	-	- (aa)	-	-
ENST00000397370	RBM39-205	612	-	ENSP00000380527	95 (aa)	-	A8MYG5
ENST00000463098	RBM39-224	869	-	-	- (aa)	-	-
ENST00000487604	RBM39-234	370	-	-	- (aa)	-	-
ENST00000461283	RBM39-221	2415	-	-	- (aa)	-	-
ENST00000426951	RBM39-211	840	-	ENSP00000405916	86 (aa)	-	H0Y6I9
ENST00000448303	RBM39-217	1008	-	ENSP00000394824	336 (aa)	-	H0Y4X3
ENST00000471635	RBM39-228	549	-	-	- (aa)	-	-
ENST00000492779	RBM39-237	2316	-	-	- (aa)	-	-
ENST00000490354	RBM39-235	436	-	-	- (aa)	-	-
ENST00000253363	RBM39-201	2488	-	ENSP00000253363	530 (aa)	-	Q14498
ENST00000470563	RBM39-227	384	-	-	- (aa)	-	-
ENST00000416108	RBM39-208	577	-	ENSP00000406900	40 (aa)	-	F2Z3E6
ENST00000475651	RBM39-229	555	-	-	- (aa)	-	-
ENST00000463004	RBM39-223	4580	-	-	- (aa)	-	-
ENST00000461849	RBM39-222	861	-	-	- (aa)	-	-
ENST00000615771	RBM39-244	686	-	ENSP00000489196	163 (aa)	-	A0A0U1RQW2
ENST00000481037	RBM39-232	687	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000131051's gene model file

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000131051	rs6060578	20	35717523	C	Blood protein levels	30072576	[0.97-1.11] unit increase	1.039	EFO_0007937

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000131051's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000131051	RBM39	64	40.816	ENSG00000122566	HNRNPA2B1	58	40.816
ENSG00000131051	RBM39	82	34.286	ENSG00000071626	DAZAP1	62	34.483
ENSG00000131051	RBM39	50	32.927	ENSG00000151923	TIAL1	62	32.927
ENSG00000131051	RBM39	90	37.500	ENSG00000254535	PABPC4L	95	37.500
ENSG00000131051	RBM39	99	42.500	ENSG00000101104	PABPC1L	81	42.500
ENSG00000131051	RBM39	73	30.000	ENSG00000149187	CELF1	51	32.787
ENSG00000131051	RBM39	73	30.000	ENSG00000048740	CELF2	51	32.787
ENSG00000131051	RBM39	63	32.903	ENSG00000152795	HNRNPDL	51	31.928
ENSG00000131051	RBM39	64	43.182	ENSG00000179950	PUF60	62	42.424
ENSG00000131051	RBM39	73	38.750	ENSG00000090621	PABPC4	82	32.692
ENSG00000131051	RBM39	64	32.911	ENSG00000197451	HNRNPAB	57	32.911
ENSG00000131051	RBM39	72	41.892	ENSG00000196361	ELAVL3	88	41.892
ENSG00000131051	RBM39	65	35.821	ENSG00000138668	HNRNPD	69	35.821
ENSG00000131051	RBM39	52	35.714	ENSG00000099622	CIRBP	91	38.356
ENSG00000131051	RBM39	79	37.500	ENSG00000151846	PABPC3	57	37.500
ENSG00000131051	RBM39	74	40.541	ENSG00000162374	ELAVL4	89	40.541
ENSG00000131051	RBM39	64	44.444	ENSG00000186288	PABPC1L2A	80	44.444
ENSG00000131051	RBM39	71	35.443	ENSG00000135486	HNRNPA1	77	35.443
ENSG00000131051	RBM39	72	30.899	ENSG00000143368	SF3B4	72	31.757
ENSG00000131051	RBM39	88	80.556	ENSG00000100461	RBM23	100	90.476
ENSG00000131051	RBM39	65	34.921	ENSG00000101489	CELF4	51	34.921
ENSG00000131051	RBM39	67	36.585	ENSG00000066044	ELAVL1	95	36.585
ENSG00000131051	RBM39	93	40.000	ENSG00000107105	ELAVL2	92	40.541
ENSG00000131051	RBM39	64	38.983	ENSG00000153944	MSI2	84	38.333
ENSG00000131051	RBM39	64	44.444	ENSG00000184388	PABPC1L2B	80	44.444
ENSG00000131051	RBM39	73	40.278	ENSG00000070756	PABPC1	84	49.020
ENSG00000131051	RBM39	63	33.333	ENSG00000116001	TIA1	85	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000131051	RBM39	86	95.000	ENSAPOG00000019452	-	99	73.295	Acanthochromis_polyacanthus
ENSG00000131051	RBM39	91	88.514	ENSAPOG00000000306	rbm39b	99	82.353	Acanthochromis_polyacanthus
ENSG00000131051	RBM39	100	100.000	ENSAMEG00000009940	RBM39	100	100.000	Ailuropoda_melanoleuca
ENSG00000131051	RBM39	98	82.083	ENSACIG00000021116	rbm39b	92	82.008	Amphilophus_citrinellus
ENSG00000131051	RBM39	86	94.286	ENSACIG00000022910	-	99	76.863	Amphilophus_citrinellus
ENSG00000131051	RBM39	86	95.000	ENSAOCG00000007223	-	99	75.000	Amphiprion_ocellaris
ENSG00000131051	RBM39	91	88.514	ENSAOCG00000006206	rbm39b	100	72.264	Amphiprion_ocellaris
ENSG00000131051	RBM39	86	95.000	ENSAPEG00000021927	-	99	75.734	Amphiprion_percula
ENSG00000131051	RBM39	91	88.514	ENSAPEG00000011141	rbm39b	100	72.264	Amphiprion_percula
ENSG00000131051	RBM39	91	87.919	ENSATEG00000007482	rbm39b	100	72.266	Anabas_testudineus
ENSG00000131051	RBM39	86	95.714	ENSATEG00000009461	-	99	83.514	Anabas_testudineus
ENSG00000131051	RBM39	100	98.446	ENSAPLG00000003477	RBM39	100	97.180	Anas_platyrhynchos
ENSG00000131051	RBM39	100	97.143	ENSACAG00000006436	RBM39	100	97.143	Anolis_carolinensis
ENSG00000131051	RBM39	100	100.000	ENSANAG00000024610	RBM39	100	100.000	Aotus_nancymaae
ENSG00000131051	RBM39	87	97.059	ENSANAG00000038387	-	100	70.079	Aotus_nancymaae
ENSG00000131051	RBM39	86	92.143	ENSACLG00000014339	-	99	76.023	Astatotilapia_calliptera
ENSG00000131051	RBM39	91	88.514	ENSACLG00000024774	rbm39b	100	73.425	Astatotilapia_calliptera
ENSG00000131051	RBM39	87	95.775	ENSAMXG00000013781	rbm39a	100	78.639	Astyanax_mexicanus
ENSG00000131051	RBM39	100	84.337	ENSAMXG00000012946	rbm39b	100	75.954	Astyanax_mexicanus
ENSG00000131051	RBM39	100	100.000	ENSBTAG00000003949	RBM39	100	100.000	Bos_taurus
ENSG00000131051	RBM39	100	100.000	ENSCJAG00000017535	RBM39	100	100.000	Callithrix_jacchus
ENSG00000131051	RBM39	100	100.000	ENSCAFG00000008327	RBM39	100	100.000	Canis_familiaris
ENSG00000131051	RBM39	100	100.000	ENSCAFG00020005676	RBM39	100	100.000	Canis_lupus_dingo
ENSG00000131051	RBM39	100	89.961	ENSCHIG00000014731	-	100	89.961	Capra_hircus
ENSG00000131051	RBM39	97	100.000	ENSCHIG00000024884	RBM39	100	100.000	Capra_hircus
ENSG00000131051	RBM39	100	100.000	ENSTSYG00000005605	RBM39	100	100.000	Carlito_syrichta
ENSG00000131051	RBM39	95	90.968	ENSCAPG00000012702	-	100	83.890	Cavia_aperea
ENSG00000131051	RBM39	99	100.000	ENSCPOG00000039333	-	100	92.264	Cavia_porcellus
ENSG00000131051	RBM39	95	89.677	ENSCPOG00000014625	-	99	91.142	Cavia_porcellus
ENSG00000131051	RBM39	87	94.118	ENSCCAG00000035313	-	100	73.596	Cebus_capucinus
ENSG00000131051	RBM39	100	100.000	ENSCCAG00000031689	-	100	100.000	Cebus_capucinus
ENSG00000131051	RBM39	91	84.459	ENSCATG00000030221	-	100	76.604	Cercocebus_atys
ENSG00000131051	RBM39	99	100.000	ENSCATG00000032917	-	99	98.883	Cercocebus_atys
ENSG00000131051	RBM39	100	100.000	ENSCLAG00000016940	RBM39	100	100.000	Chinchilla_lanigera
ENSG00000131051	RBM39	91	100.000	ENSCSAG00000010271	RBM39	98	92.531	Chlorocebus_sabaeus
ENSG00000131051	RBM39	100	99.482	ENSCPBG00000011600	RBM39	100	98.473	Chrysemys_picta_bellii
ENSG00000131051	RBM39	81	93.750	ENSCANG00000022597	-	100	73.519	Colobus_angolensis_palliatus
ENSG00000131051	RBM39	100	100.000	ENSCANG00000031033	-	100	100.000	Colobus_angolensis_palliatus
ENSG00000131051	RBM39	100	100.000	ENSCGRG00001013983	Rbm39	100	100.000	Cricetulus_griseus_chok1gshd
ENSG00000131051	RBM39	100	100.000	ENSCGRG00000015067	Rbm39	100	100.000	Cricetulus_griseus_crigri
ENSG00000131051	RBM39	90	89.041	ENSCSEG00000021307	rbm39b	100	73.137	Cynoglossus_semilaevis
ENSG00000131051	RBM39	86	95.000	ENSCSEG00000020394	-	99	74.269	Cynoglossus_semilaevis
ENSG00000131051	RBM39	91	89.189	ENSCVAG00000015985	rbm39b	100	72.852	Cyprinodon_variegatus
ENSG00000131051	RBM39	86	87.383	ENSCVAG00000014408	-	99	79.459	Cyprinodon_variegatus
ENSG00000131051	RBM39	87	97.183	ENSDARG00000011613	rbm39a	100	80.076	Danio_rerio
ENSG00000131051	RBM39	90	91.096	ENSDARG00000041853	rbm39b	100	74.815	Danio_rerio
ENSG00000131051	RBM39	100	100.000	ENSDNOG00000025219	RBM39	100	100.000	Dasypus_novemcinctus
ENSG00000131051	RBM39	100	100.000	ENSDORG00000000233	Rbm39	100	100.000	Dipodomys_ordii
ENSG00000131051	RBM39	100	100.000	ENSETEG00000016295	RBM39	100	85.472	Echinops_telfairi
ENSG00000131051	RBM39	91	84.564	ENSEBUG00000001337	rbm39a	78	76.692	Eptatretus_burgeri
ENSG00000131051	RBM39	95	100.000	ENSEASG00005003936	RBM39	100	100.000	Equus_asinus_asinus
ENSG00000131051	RBM39	100	100.000	ENSECAG00000013423	RBM39	100	100.000	Equus_caballus
ENSG00000131051	RBM39	100	100.000	ENSEEUG00000004390	RBM39	100	94.717	Erinaceus_europaeus
ENSG00000131051	RBM39	86	97.143	ENSELUG00000020296	rbm39a	98	78.378	Esox_lucius
ENSG00000131051	RBM39	88	93.706	ENSELUG00000001796	rbm39b	100	78.598	Esox_lucius
ENSG00000131051	RBM39	100	100.000	ENSFCAG00000003233	RBM39	100	100.000	Felis_catus
ENSG00000131051	RBM39	100	97.519	ENSFALG00000012498	RBM39	100	97.519	Ficedula_albicollis
ENSG00000131051	RBM39	89	75.862	ENSFDAG00000007943	-	100	74.930	Fukomys_damarensis
ENSG00000131051	RBM39	86	79.147	ENSFDAG00000021507	-	100	69.755	Fukomys_damarensis
ENSG00000131051	RBM39	81	95.833	ENSFDAG00000015069	-	99	66.421	Fukomys_damarensis
ENSG00000131051	RBM39	100	100.000	ENSFDAG00000021510	-	100	100.000	Fukomys_damarensis
ENSG00000131051	RBM39	86	90.714	ENSFHEG00000006810	-	74	85.535	Fundulus_heteroclitus
ENSG00000131051	RBM39	91	89.189	ENSFHEG00000003421	rbm39b	100	72.008	Fundulus_heteroclitus
ENSG00000131051	RBM39	99	63.830	ENSGMOG00000016584	rbm39b	61	87.500	Gadus_morhua
ENSG00000131051	RBM39	66	97.436	ENSGMOG00000017567	-	92	71.611	Gadus_morhua
ENSG00000131051	RBM39	100	98.446	ENSGALG00000001550	RBM39	100	98.092	Gallus_gallus
ENSG00000131051	RBM39	86	75.472	ENSGAFG00000019545	-	99	74.255	Gambusia_affinis
ENSG00000131051	RBM39	91	89.189	ENSGAFG00000021058	rbm39b	100	73.282	Gambusia_affinis
ENSG00000131051	RBM39	92	87.333	ENSGACG00000002797	rbm39b	100	82.561	Gasterosteus_aculeatus
ENSG00000131051	RBM39	92	87.333	ENSGACG00000003376	-	100	67.269	Gasterosteus_aculeatus
ENSG00000131051	RBM39	100	99.482	ENSGAGG00000015140	RBM39	100	98.473	Gopherus_agassizii
ENSG00000131051	RBM39	99	82.633	ENSGGOG00000036253	-	99	87.470	Gorilla_gorilla
ENSG00000131051	RBM39	100	100.000	ENSGGOG00000003950	RBM39	100	100.000	Gorilla_gorilla
ENSG00000131051	RBM39	91	88.514	ENSHBUG00000006158	rbm39b	100	73.425	Haplochromis_burtoni
ENSG00000131051	RBM39	86	92.857	ENSHBUG00000009017	-	99	76.321	Haplochromis_burtoni
ENSG00000131051	RBM39	95	81.707	ENSHGLG00000001772	-	98	76.817	Heterocephalus_glaber_female
ENSG00000131051	RBM39	99	84.706	ENSHGLG00000010196	-	100	71.540	Heterocephalus_glaber_female
ENSG00000131051	RBM39	100	72.727	ENSHGLG00000006013	-	100	70.377	Heterocephalus_glaber_female
ENSG00000131051	RBM39	100	100.000	ENSHGLG00000017871	RBM39	100	100.000	Heterocephalus_glaber_female
ENSG00000131051	RBM39	98	81.176	ENSHGLG00100000829	-	98	67.067	Heterocephalus_glaber_male
ENSG00000131051	RBM39	100	100.000	ENSHGLG00100019327	-	100	100.000	Heterocephalus_glaber_male
ENSG00000131051	RBM39	80	93.617	ENSHGLG00100008245	-	100	77.353	Heterocephalus_glaber_male
ENSG00000131051	RBM39	97	76.435	ENSHGLG00100011532	-	100	69.623	Heterocephalus_glaber_male
ENSG00000131051	RBM39	91	89.933	ENSHCOG00000009222	rbm39b	100	72.941	Hippocampus_comes
ENSG00000131051	RBM39	86	92.143	ENSHCOG00000014668	-	99	72.534	Hippocampus_comes
ENSG00000131051	RBM39	92	88.667	ENSIPUG00000012202	rbm39b	100	73.333	Ictalurus_punctatus
ENSG00000131051	RBM39	91	91.946	ENSIPUG00000024623	rbm39	100	79.216	Ictalurus_punctatus
ENSG00000131051	RBM39	100	100.000	ENSSTOG00000030698	RBM39	99	95.093	Ictidomys_tridecemlineatus
ENSG00000131051	RBM39	99	83.573	ENSJJAG00000023249	-	100	71.457	Jaculus_jaculus
ENSG00000131051	RBM39	95	90.968	ENSJJAG00000016745	-	100	92.916	Jaculus_jaculus
ENSG00000131051	RBM39	87	78.281	ENSKMAG00000014566	-	99	68.198	Kryptolebias_marmoratus
ENSG00000131051	RBM39	91	88.591	ENSKMAG00000016811	rbm39b	100	73.384	Kryptolebias_marmoratus
ENSG00000131051	RBM39	92	92.667	ENSLBEG00000008018	-	99	81.199	Labrus_bergylta
ENSG00000131051	RBM39	92	92.667	ENSLBEG00000018799	-	99	70.391	Labrus_bergylta
ENSG00000131051	RBM39	91	88.514	ENSLBEG00000009909	rbm39b	100	82.561	Labrus_bergylta
ENSG00000131051	RBM39	91	97.987	ENSLACG00000018811	RBM39	100	85.687	Latimeria_chalumnae
ENSG00000131051	RBM39	88	86.047	ENSLACG00000016576	-	98	77.135	Latimeria_chalumnae
ENSG00000131051	RBM39	90	96.575	ENSLOCG00000006562	rbm39a	100	82.922	Lepisosteus_oculatus
ENSG00000131051	RBM39	100	100.000	ENSLAFG00000010346	RBM39	100	100.000	Loxodonta_africana
ENSG00000131051	RBM39	82	100.000	ENSMFAG00000042593	RBM39	95	100.000	Macaca_fascicularis
ENSG00000131051	RBM39	100	100.000	ENSMMUG00000031284	RBM39	100	100.000	Macaca_mulatta
ENSG00000131051	RBM39	100	100.000	ENSMNEG00000040217	RBM39	100	100.000	Macaca_nemestrina
ENSG00000131051	RBM39	81	95.833	ENSMLEG00000030882	-	100	77.170	Mandrillus_leucophaeus
ENSG00000131051	RBM39	92	99.333	ENSMLEG00000031533	-	100	100.000	Mandrillus_leucophaeus
ENSG00000131051	RBM39	90	90.411	ENSMAMG00000011883	rbm39b	100	73.438	Mastacembelus_armatus
ENSG00000131051	RBM39	86	95.714	ENSMAMG00000009683	-	99	77.821	Mastacembelus_armatus
ENSG00000131051	RBM39	88	89.498	ENSMZEG00005012065	-	99	75.977	Maylandia_zebra
ENSG00000131051	RBM39	91	88.514	ENSMZEG00005023724	rbm39b	86	73.425	Maylandia_zebra
ENSG00000131051	RBM39	100	97.927	ENSMGAG00000001509	RBM39	100	96.792	Meleagris_gallopavo
ENSG00000131051	RBM39	93	100.000	ENSMAUG00000014642	Rbm39	97	100.000	Mesocricetus_auratus
ENSG00000131051	RBM39	100	100.000	ENSMICG00000001668	RBM39	100	100.000	Microcebus_murinus
ENSG00000131051	RBM39	100	84.934	ENSMICG00000035049	-	100	86.667	Microcebus_murinus
ENSG00000131051	RBM39	100	100.000	ENSMOCG00000017326	Rbm39	100	97.358	Microtus_ochrogaster
ENSG00000131051	RBM39	92	88.000	ENSMMOG00000020616	rbm39b	100	71.073	Mola_mola
ENSG00000131051	RBM39	93	87.417	ENSMMOG00000017823	-	99	80.376	Mola_mola
ENSG00000131051	RBM39	100	98.964	ENSMODG00000001557	RBM39	100	97.373	Monodelphis_domestica
ENSG00000131051	RBM39	91	80.087	ENSMALG00000020628	-	100	68.677	Monopterus_albus
ENSG00000131051	RBM39	91	88.514	ENSMALG00000021595	rbm39b	100	75.686	Monopterus_albus
ENSG00000131051	RBM39	100	99.811	MGP_CAROLIEiJ_G0024554	Rbm39	100	100.000	Mus_caroli
ENSG00000131051	RBM39	100	99.811	ENSMUSG00000027620	Rbm39	100	99.811	Mus_musculus
ENSG00000131051	RBM39	99	98.824	MGP_PahariEiJ_G0025999	Rbm39	100	96.792	Mus_pahari
ENSG00000131051	RBM39	100	99.811	MGP_SPRETEiJ_G0025476	Rbm39	100	100.000	Mus_spretus
ENSG00000131051	RBM39	100	100.000	ENSMPUG00000017786	RBM39	100	100.000	Mustela_putorius_furo
ENSG00000131051	RBM39	100	99.619	ENSMLUG00000003000	RBM39	100	99.619	Myotis_lucifugus
ENSG00000131051	RBM39	100	100.000	ENSNGAG00000016684	Rbm39	100	100.000	Nannospalax_galili
ENSG00000131051	RBM39	91	87.838	ENSNBRG00000017035	rbm39b	100	71.709	Neolamprologus_brichardi
ENSG00000131051	RBM39	99	68.358	ENSNBRG00000007057	-	76	71.788	Neolamprologus_brichardi
ENSG00000131051	RBM39	100	72.727	ENSNLEG00000036235	-	100	66.605	Nomascus_leucogenys
ENSG00000131051	RBM39	99	100.000	ENSNLEG00000010350	-	100	100.000	Nomascus_leucogenys
ENSG00000131051	RBM39	91	100.000	ENSOPRG00000002183	RBM39	100	83.227	Ochotona_princeps
ENSG00000131051	RBM39	99	100.000	ENSODEG00000013774	-	100	98.295	Octodon_degus
ENSG00000131051	RBM39	100	98.679	ENSODEG00000000850	-	100	98.679	Octodon_degus
ENSG00000131051	RBM39	91	87.919	ENSONIG00000017310	rbm39b	100	73.055	Oreochromis_niloticus
ENSG00000131051	RBM39	88	91.667	ENSONIG00000000274	-	100	74.460	Oreochromis_niloticus
ENSG00000131051	RBM39	99	96.471	ENSOANG00000006045	-	100	67.990	Ornithorhynchus_anatinus
ENSG00000131051	RBM39	99	93.838	ENSOCUG00000007050	RBM39	100	91.149	Oryctolagus_cuniculus
ENSG00000131051	RBM39	90	90.411	ENSORLG00000010370	rbm39b	100	72.656	Oryzias_latipes
ENSG00000131051	RBM39	88	91.244	ENSORLG00000009919	-	99	75.342	Oryzias_latipes
ENSG00000131051	RBM39	88	91.244	ENSORLG00020006098	-	99	74.510	Oryzias_latipes_hni
ENSG00000131051	RBM39	90	90.411	ENSORLG00020021077	rbm39b	100	72.656	Oryzias_latipes_hni
ENSG00000131051	RBM39	88	91.244	ENSORLG00015002315	-	99	75.538	Oryzias_latipes_hsok
ENSG00000131051	RBM39	90	90.411	ENSORLG00015016695	rbm39b	100	72.656	Oryzias_latipes_hsok
ENSG00000131051	RBM39	90	90.411	ENSOMEG00000010704	rbm39b	100	72.266	Oryzias_melastigma
ENSG00000131051	RBM39	88	91.628	ENSOMEG00000001685	-	99	73.735	Oryzias_melastigma
ENSG00000131051	RBM39	100	87.961	ENSOGAG00000027149	-	100	87.170	Otolemur_garnettii
ENSG00000131051	RBM39	100	85.206	ENSOGAG00000011227	-	100	85.206	Otolemur_garnettii
ENSG00000131051	RBM39	100	100.000	ENSOARG00000014859	RBM39	100	99.619	Ovis_aries
ENSG00000131051	RBM39	100	100.000	ENSPPAG00000029710	-	100	100.000	Pan_paniscus
ENSG00000131051	RBM39	98	82.051	ENSPPAG00000041179	-	100	83.333	Pan_paniscus
ENSG00000131051	RBM39	100	100.000	ENSPPRG00000002157	RBM39	100	100.000	Panthera_pardus
ENSG00000131051	RBM39	100	100.000	ENSPTIG00000009580	RBM39	100	99.623	Panthera_tigris_altaica
ENSG00000131051	RBM39	94	99.799	ENSPTRG00000045535	-	100	100.000	Pan_troglodytes
ENSG00000131051	RBM39	100	100.000	ENSPTRG00000049720	-	100	100.000	Pan_troglodytes
ENSG00000131051	RBM39	98	82.386	ENSPTRG00000049437	-	100	83.745	Pan_troglodytes
ENSG00000131051	RBM39	100	84.717	ENSPTRG00000046501	-	100	84.340	Pan_troglodytes
ENSG00000131051	RBM39	99	100.000	ENSPANG00000021248	RBM39	100	97.547	Papio_anubis
ENSG00000131051	RBM39	92	95.333	ENSPKIG00000007461	-	100	82.561	Paramormyrops_kingsleyae
ENSG00000131051	RBM39	91	95.302	ENSPKIG00000017145	rbm39a	100	80.926	Paramormyrops_kingsleyae
ENSG00000131051	RBM39	100	98.964	ENSPSIG00000017885	RBM39	100	97.353	Pelodiscus_sinensis
ENSG00000131051	RBM39	85	90.431	ENSPMGG00000023123	rbm39b	90	85.463	Periophthalmus_magnuspinnatus
ENSG00000131051	RBM39	92	88.667	ENSPMGG00000021264	-	99	79.133	Periophthalmus_magnuspinnatus
ENSG00000131051	RBM39	100	100.000	ENSPEMG00000021887	Rbm39	100	100.000	Peromyscus_maniculatus_bairdii
ENSG00000131051	RBM39	91	77.119	ENSPMAG00000004125	RBM39	71	73.165	Petromyzon_marinus
ENSG00000131051	RBM39	90	82.877	ENSPMAG00000005814	RBM39	99	66.978	Petromyzon_marinus
ENSG00000131051	RBM39	100	98.964	ENSPCIG00000027946	RBM39	100	98.473	Phascolarctos_cinereus
ENSG00000131051	RBM39	88	89.401	ENSPFOG00000012350	-	99	75.686	Poecilia_formosa
ENSG00000131051	RBM39	91	89.189	ENSPFOG00000013197	rbm39b	100	72.901	Poecilia_formosa
ENSG00000131051	RBM39	91	89.189	ENSPLAG00000017500	rbm39b	100	72.901	Poecilia_latipinna
ENSG00000131051	RBM39	86	90.714	ENSPLAG00000013925	-	99	81.301	Poecilia_latipinna
ENSG00000131051	RBM39	88	89.401	ENSPMEG00000002750	-	99	75.686	Poecilia_mexicana
ENSG00000131051	RBM39	91	89.189	ENSPMEG00000007689	rbm39b	100	72.901	Poecilia_mexicana
ENSG00000131051	RBM39	91	89.189	ENSPREG00000015150	rbm39b	100	74.706	Poecilia_reticulata
ENSG00000131051	RBM39	88	89.862	ENSPREG00000021088	-	99	78.167	Poecilia_reticulata
ENSG00000131051	RBM39	100	100.000	ENSPPYG00000010963	RBM39	100	100.000	Pongo_abelii
ENSG00000131051	RBM39	99	93.838	ENSPCAG00000008764	RBM39	100	90.943	Procavia_capensis
ENSG00000131051	RBM39	91	98.658	ENSPCOG00000025238	-	100	89.266	Propithecus_coquereli
ENSG00000131051	RBM39	100	100.000	ENSPCOG00000027976	-	100	100.000	Propithecus_coquereli
ENSG00000131051	RBM39	99	98.853	ENSPVAG00000014944	RBM39	99	98.853	Pteropus_vampyrus
ENSG00000131051	RBM39	86	92.143	ENSPNYG00000010982	-	99	79.427	Pundamilia_nyererei
ENSG00000131051	RBM39	91	88.514	ENSPNYG00000004315	rbm39b	97	73.425	Pundamilia_nyererei
ENSG00000131051	RBM39	91	92.617	ENSPNAG00000007852	rbm39a	100	83.106	Pygocentrus_nattereri
ENSG00000131051	RBM39	96	87.821	ENSPNAG00000007787	rbm39b	100	77.290	Pygocentrus_nattereri
ENSG00000131051	RBM39	100	99.809	ENSRNOG00000049814	LOC100910882	100	99.809	Rattus_norvegicus
ENSG00000131051	RBM39	100	99.809	ENSRNOG00000019848	Rbm39	100	99.809	Rattus_norvegicus
ENSG00000131051	RBM39	99	81.395	ENSRBIG00000013669	-	100	80.226	Rhinopithecus_bieti
ENSG00000131051	RBM39	100	100.000	ENSRBIG00000044413	-	100	100.000	Rhinopithecus_bieti
ENSG00000131051	RBM39	100	100.000	ENSRROG00000037484	RBM39	100	100.000	Rhinopithecus_roxellana
ENSG00000131051	RBM39	87	91.176	ENSSBOG00000031847	-	100	68.482	Saimiri_boliviensis_boliviensis
ENSG00000131051	RBM39	100	100.000	ENSSBOG00000025642	-	100	93.208	Saimiri_boliviensis_boliviensis
ENSG00000131051	RBM39	100	98.964	ENSSHAG00000018608	RBM39	100	98.473	Sarcophilus_harrisii
ENSG00000131051	RBM39	92	95.333	ENSSFOG00015003597	rbm39	100	82.440	Scleropages_formosus
ENSG00000131051	RBM39	92	96.000	ENSSFOG00015017280	-	100	80.312	Scleropages_formosus
ENSG00000131051	RBM39	91	88.514	ENSSMAG00000010777	rbm39b	100	72.941	Scophthalmus_maximus
ENSG00000131051	RBM39	92	90.000	ENSSMAG00000006440	-	100	72.381	Scophthalmus_maximus
ENSG00000131051	RBM39	91	88.514	ENSSDUG00000014712	rbm39b	100	73.256	Seriola_dumerili
ENSG00000131051	RBM39	86	95.714	ENSSDUG00000018191	-	100	66.849	Seriola_dumerili
ENSG00000131051	RBM39	86	95.714	ENSSLDG00000022188	-	100	72.089	Seriola_lalandi_dorsalis
ENSG00000131051	RBM39	91	88.514	ENSSLDG00000006938	rbm39b	100	73.256	Seriola_lalandi_dorsalis
ENSG00000131051	RBM39	99	93.838	ENSSARG00000007673	RBM39	100	87.547	Sorex_araneus
ENSG00000131051	RBM39	91	100.000	ENSSPUG00000012393	RBM39	98	93.699	Sphenodon_punctatus
ENSG00000131051	RBM39	86	95.714	ENSSPAG00000021798	-	80	84.733	Stegastes_partitus
ENSG00000131051	RBM39	91	88.514	ENSSPAG00000017157	rbm39b	100	72.605	Stegastes_partitus
ENSG00000131051	RBM39	100	100.000	ENSSSCG00000007309	RBM39	100	100.000	Sus_scrofa
ENSG00000131051	RBM39	100	97.927	ENSTGUG00000003048	RBM39	100	96.970	Taeniopygia_guttata
ENSG00000131051	RBM39	92	86.667	ENSTRUG00000011352	rbm39b	100	72.745	Takifugu_rubripes
ENSG00000131051	RBM39	85	83.256	ENSTRUG00000021378	-	86	79.736	Takifugu_rubripes
ENSG00000131051	RBM39	92	78.667	ENSTNIG00000005223	-	100	69.275	Tetraodon_nigroviridis
ENSG00000131051	RBM39	92	86.667	ENSTNIG00000017904	rbm39b	88	82.025	Tetraodon_nigroviridis
ENSG00000131051	RBM39	91	100.000	ENSTBEG00000017320	RBM39	98	84.362	Tupaia_belangeri
ENSG00000131051	RBM39	100	100.000	ENSTTRG00000017039	RBM39	100	100.000	Tursiops_truncatus
ENSG00000131051	RBM39	100	100.000	ENSUAMG00000010443	RBM39	100	100.000	Ursus_americanus
ENSG00000131051	RBM39	100	100.000	ENSUMAG00000004302	RBM39	100	100.000	Ursus_maritimus
ENSG00000131051	RBM39	100	100.000	ENSVPAG00000003819	RBM39	100	93.763	Vicugna_pacos
ENSG00000131051	RBM39	100	100.000	ENSVVUG00000001290	RBM39	100	100.000	Vulpes_vulpes
ENSG00000131051	RBM39	91	98.658	ENSXETG00000007434	rbm39	100	86.239	Xenopus_tropicalis
ENSG00000131051	RBM39	86	90.714	ENSXCOG00000017255	-	99	77.628	Xiphophorus_couchianus
ENSG00000131051	RBM39	91	88.514	ENSXCOG00000005456	rbm39b	100	72.211	Xiphophorus_couchianus
ENSG00000131051	RBM39	91	89.189	ENSXMAG00000017099	rbm39b	100	75.442	Xiphophorus_maculatus
ENSG00000131051	RBM39	98	80.658	ENSXMAG00000012463	-	99	76.280	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0005515	protein binding	15798186.17389360.22365833.23602568.25416956.28437394.	IPI	Function
GO:0005654	nucleoplasm	-	IDA	Component
GO:0005815	microtubule organizing center	-	IDA	Component
GO:0006396	RNA processing	8227358.	TAS	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0015630	microtubule cytoskeleton	-	IDA	Component
GO:0016607	nuclear speck	-	IDA	Component
GO:0016607	nuclear speck	28437394.	IMP	Component
GO:0032991	protein-containing complex	28437394.	IMP	Component

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.