EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr18	48761341	Intron	novel		0.33
BLCA	chr18	48817371	Missense_Mutation	novel	R508G	0.22	MIF4G
BLCA	chr18	48761425	Missense_Mutation	NA	Q369H	0.11
BLCA	chr18	48761410	Silent	rs141427281	T364T	0.3
BLCA	chr18	48761609	Missense_Mutation	NA	A431T	0.26	MIF4G
BLCA	chr18	48859505	Silent	novel	L581L	0.34
BRCA	chr18	48636672	Frame_Shift_Del	NA	*P82Hfs77**	0.62
BRCA	chr18	48758298	Missense_Mutation	NA	E322Q	0.38
BRCA	chr18	48758140	Missense_Mutation	rs373686942	R269H	0.14
BRCA	chr18	48664521	Missense_Mutation	novel	K134R	0.07
CESC	chr18	48539832	Intron	novel		0.37
CESC	chr18	48758259	Missense_Mutation	NA	E309Q	0.25
CESC	chr18	48817242	Missense_Mutation	NA	E465K	0.45	MIF4G
CESC	chr18	48761567	Missense_Mutation	rs144162788	I417V	0.21	MIF4G
CESC	chr18	48859686	3'UTR	rs575335946		0.24
CESC	chr18	48711688	Missense_Mutation	NA	D193H	0.88
CESC	chr18	48757966	Missense_Mutation	novel	D211G	0.29
CHOL	chr18	48859403	Silent	novel	L547L	0.44
COAD	chr18	48857588	Missense_Mutation	novel	L510F	0.09	MIF4G
COAD	chr18	48636672	Frame_Shift_Del	NA	*P82Hfs77**	0.3
COAD	chr18	48817266	Missense_Mutation	rs775953061	R473C	0.25	MIF4G
COAD	chr18	48859673	3'UTR	novel		0.3
COAD	chr18	48757993	Missense_Mutation	NA	N220S	0.49
COAD	chr18	48636672	Frame_Shift_Del	NA	*P82Hfs77**	0.43
COAD	chr18	48859409	Silent	rs754410030	S549S	0.46
ESCA	chr18	48859849	3'UTR	novel		0.26
GBM	chr18	48761392	Splice_Region	novel	D358D	0.09
GBM	chr18	48761355	Intron	novel		0.09
GBM	chr18	48859386	Missense_Mutation	NA	M542V	0.28	MIF4G
GBM	chr18	48663814	Silent	novel	F105F	0.42
GBM	chr18	48711651	Silent	rs529540741	I180I	0.43
GBM	chr18	48664482	Missense_Mutation	novel	D121A	0.04
GBM	chr18	48758326	Missense_Mutation	novel	P331L	0.09
HNSC	chr18	48859410	Missense_Mutation	rs778674002	A550T	0.28	MIF4G
HNSC	chr18	48859452	Missense_Mutation	novel	R564W	0.22	MIF4G
HNSC	chr18	48859712	3'UTR	novel		0.5
HNSC	chr18	48859714	3'UTR	novel		0.6
HNSC	chr18	48859593	3'UTR	novel		0.31
HNSC	chr18	48761562	Missense_Mutation	NA	R415P	0.12	MIF4G
HNSC	chr18	48670700	Missense_Mutation	novel	G155S	0.09
KICH	chr18	48619700	Silent	rs769047846	T45T	0.41
KIRC	chr18	48761469	Frame_Shift_Ins	novel	*D388Nfs143**	0.04	MIF4G
LGG	chr18	48758140	Missense_Mutation	rs373686942	R269H	0.05
LGG	chr18	48758140	Missense_Mutation	rs373686942	R269H	0.53
LIHC	chr18	48761522	Missense_Mutation	novel	N402D	0.94	MIF4G
LIHC	chr18	48636654	Missense_Mutation	novel	S74C	0.4
LIHC	chr18	48636655	Silent	novel	S74S	0.4
LIHC	chr18	48761594	Missense_Mutation	NA	S426G	0.43	MIF4G
LIHC	chr18	48859537	Frame_Shift_Del	novel	*I593Sfs4**	0.06
LUAD	chr18	48857606	Missense_Mutation	NA	V516M	0.2	MIF4G
LUAD	chr18	48758159	Missense_Mutation	NA	M275I	0.21
LUAD	chr18	48758399	Frame_Shift_Ins	novel	*E356Rfs4**	0.1
LUAD	chr18	48758400	Missense_Mutation	novel	E356K	0.1
LUAD	chr18	48859501	Missense_Mutation	NA	P580R	0.2
LUAD	chr18	48817304	Silent	rs751496412	F485F	0.19
LUSC	chr18	48664522	Missense_Mutation	novel	K134N	0.12
LUSC	chr18	48758360	Silent	novel	L342L	0.22
LUSC	chr18	48758005	Missense_Mutation	NA	Q224R	0.49
LUSC	chr18	48757948	Missense_Mutation	NA	K205M	0.42
LUSC	chr18	48758019	Missense_Mutation	NA	G229W	0.51
LUSC	chr18	48761562	Missense_Mutation	NA	R415P	0.24	MIF4G
LUSC	chr18	48619595	Silent	NA	S10S	0.64
LUSC	chr18	48758127	Missense_Mutation	NA	A265T	0.27
LUSC	chr18	48670693	Silent	novel	D152D	0.69
OV	chr18	48859607	3'UTR	novel		0.14
OV	chr18	48758133	Missense_Mutation	rs202032754	A267T	0.91
OV	chr18	48859453	Missense_Mutation	rs369410150	R564Q	0.25	MIF4G
OV	chr18	48859519	Missense_Mutation	novel	T586R	0.16
OV	chr18	48758153	Missense_Mutation	novel	E273D	0.41
PRAD	chr18	48761331	Intron	novel		0.14
READ	chr18	48636672	Frame_Shift_Del	NA	*P82Hfs77**	0.35
READ	chr18	48758018	Frame_Shift_Del	novel	*G230Afs26**	0.35
READ	chr18	48817328	Silent	novel	G493G	0.08
READ	chr18	48859656	3'UTR	novel		0.6
SARC	chr18	48862636	3'UTR	novel		0.13
SARC	chr18	48636637	Silent	rs577092756	P68P	0.26
SKCM	chr18	48761393	Missense_Mutation	novel	E359K	0.16
SKCM	chr18	48758248	Missense_Mutation	rs772233727	P305L	0.66
SKCM	chr18	48619618	Missense_Mutation	NA	S18F	0.42
SKCM	chr18	48817263	Missense_Mutation	NA	E472K	0.17	MIF4G
SKCM	chr18	48761557	Silent	rs139271263	I413I	0.54
SKCM	chr18	48663751	Splice_Site	novel	X85_splice	0.41
SKCM	chr18	48663752	Missense_Mutation	novel	N85Y	0.4
SKCM	chr18	48857624	Missense_Mutation	NA	L522F	0.23	MIF4G
SKCM	chr18	48619649	Silent	NA	I28I	0.23
SKCM	chr18	48761473	Silent	NA	N385N	0.34
SKCM	chr18	48857624	Missense_Mutation	NA	L522F	0.11	MIF4G
SKCM	chr18	48859360	Missense_Mutation	rs372476573	R533Q	0.44	MIF4G
SKCM	chr18	48859361	Silent	novel	R533R	0.44
SKCM	chr18	48711628	Missense_Mutation	NA	P173S	0.14
SKCM	chr18	48859496	Missense_Mutation	NA	W578C	0.13	MIF4G
SKCM	chr18	48619690	Missense_Mutation	NA	A42V	0.33
SKCM	chr18	48663820	Silent	NA	S107S	0.22
SKCM	chr18	48761552	Missense_Mutation	rs773426583	E412K	0.31	MIF4G
SKCM	chr18	48758370	Missense_Mutation	NA	S346T	0.36
SKCM	chr18	48859405	Missense_Mutation	NA	A548V	0.31	MIF4G
SKCM	chr18	48859630	3'UTR	novel		0.43
SKCM	chr18	48758142	Missense_Mutation	NA	N270D	0.44
SKCM	chr18	48758296	Missense_Mutation	NA	V321A	0.29
STAD	chr18	48859484	Silent	rs763897308	H574H	0.22
STAD	chr18	48859453	Missense_Mutation	rs369410150	R564Q	0.34	MIF4G
STAD	chr18	48761512	Missense_Mutation	NA	E398D	0.1	MIF4G
STAD	chr18	48758143	Missense_Mutation	rs769967502	N270S	0.38
STAD	chr18	48758120	Frame_Shift_Del	novel	*E264Rfs12**	0.34
STAD	chr18	48817259	Silent	rs760142164	D470D	0.32
STAD	chr18	48636672	Frame_Shift_Del	NA	*P82Hfs77**	0.14
STAD	chr18	48859360	Missense_Mutation	rs372476573	R533Q	0.35	MIF4G
STAD	chr18	48817225	Missense_Mutation	novel	D459V	0.17	MIF4G
STAD	chr18	48758018	Frame_Shift_Del	novel	*G230Afs26**	0.3
STAD	chr18	48636673	Silent	NA	A80A	0.18
STAD	chr18	48761681	Missense_Mutation	NA	M455V	0.33	MIF4G
STAD	chr18	48859449	Missense_Mutation	NA	T563A	0.3	MIF4G
STAD	chr18	48757936	Frame_Shift_Ins	NA	*N204Qfs8**	0.1
STAD	chr18	48761436	Missense_Mutation	NA	D373G	0.08
STAD	chr18	48758389	Missense_Mutation	rs768247779	R352Q	0.29
STAD	chr18	48859423	Missense_Mutation	NA	M554R	0.34	MIF4G
STAD	chr18	48636672	Frame_Shift_Del	NA	*P82Hfs77**	0.47
UCEC	chr18	48862643	3'UTR	novel		0.24
UCEC	chr18	48758343	Missense_Mutation	rs139514005	R337W	0.31
UCEC	chr18	48817344	Missense_Mutation	novel	L499F	0.35	MIF4G
UCEC	chr18	48859509	Frame_Shift_Del	novel	*I585Sfs12**	0.45
UCEC	chr18	48758388	Nonsense_Mutation	rs748876705	R352*	0.33
UCEC	chr18	48859852	3'UTR	novel		0.3
UCEC	chr18	48817274	Silent	novel	L475L	0.2
UCEC	chr18	48758307	Missense_Mutation	rs775145496	R325C	0.41
UCEC	chr18	48758262	Missense_Mutation	rs759011311	R310W	0.45
UCEC	chr18	48636668	Nonsense_Mutation	rs764607946	R79*	0.46
UCEC	chr18	48859651	3'UTR	rs572944293		0.31
UCEC	chr18	48758331	Missense_Mutation	NA	R333C	0.29
UCEC	chr18	48636669	Missense_Mutation	rs373584006	R79Q	0.19
UCEC	chr18	48817236	Missense_Mutation	novel	R463C	0.16	MIF4G
UCEC	chr18	48862407	3'UTR	novel		0.11
UCEC	chr18	48711652	Missense_Mutation	rs762972192	A181T	0.38
UCEC	chr18	48859475	Silent	rs754275019	I571I	0.33
UCEC	chr18	48859398	Missense_Mutation	novel	L546F	0.22	MIF4G
UCEC	chr18	48761633	Missense_Mutation	novel	A439T	0.5	MIF4G
UCEC	chr18	48859467	Nonsense_Mutation	novel	E569*	0.38	MIF4G
UCEC	chr18	48859686	3'UTR	rs575335946		0.32
UCEC	chr18	48862675	3'UTR	novel		0.42
UCEC	chr18	48859493	Silent	NA	S577S	0.43
UCEC	chr18	48539796	Intron	novel		0.29
UCEC	chr18	48859485	Missense_Mutation	novel	A575T	0.4	MIF4G
UCEC	chr18	48758012	Silent	novel	S226S	0.15
UCEC	chr18	48862552	3'UTR	novel		0.14
UCEC	chr18	48619631	Silent	novel	E22E	0.43
UCEC	chr18	48663789	Missense_Mutation	novel	T97M	0.26
UCEC	chr18	48758139	Missense_Mutation	rs369443953	R269C	0.37
UCEC	chr18	48664521	Missense_Mutation	novel	K134T	0.27
UCEC	chr18	48711652	Missense_Mutation	rs762972192	A181T	0.23
UCEC	chr18	48761557	Silent	rs139271263	I413I	0.4
UCEC	chr18	48859984	3'UTR	novel		0.4
UCEC	chr18	48817237	Missense_Mutation	novel	R463H	0.35	MIF4G
UCEC	chr18	48862702	3'UTR	novel		0.32
UCEC	chr18	48670693	Silent	novel	D152D	0.35
UCEC	chr18	48859520	Silent	rs745825021	T586T	0.54
UCEC	chr18	48636672	Frame_Shift_Del	NA	*P82Hfs77**	0.38
UCEC	chr18	48664449	Missense_Mutation	novel	G110D	0.26
UCEC	chr18	48663763	Missense_Mutation	novel	K88N	0.37
UCEC	chr18	48761402	Missense_Mutation	rs202183503	V362M	0.35
UCEC	chr18	48862526	3'UTR	novel		0.37
UCEC	chr18	48859850	3'UTR	novel		0.31
UCEC	chr18	48758401	Frame_Shift_Del	novel	*K357Rfs19**	0.33
UCEC	chr18	48711692	Missense_Mutation	NA	R194Q	0.37
UCEC	chr18	48663786	Missense_Mutation	NA	G96D	0.44
UCEC	chr18	48758079	Missense_Mutation	rs529167870	R249C	0.18
UCEC	chr18	48761465	Missense_Mutation	rs773375297	R383W	0.14	MIF4G
UCEC	chr18	48711673	Missense_Mutation	NA	R188C	0.22
UCEC	chr18	48758303	Frame_Shift_Del	novel	*K324Nfs31**	0.22
UCEC	chr18	48711629	Missense_Mutation	novel	P173L	0.35
UCEC	chr18	48758031	Missense_Mutation	novel	P233S	0.29
UCEC	chr18	48761623	Silent	rs151074919	C435C	0.46
UCEC	chr18	48817346	Silent	novel	L499L	0.35

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
LIHC	DEL	0.2351	0.019373
UCEC	DEL	0.1354	0.006131

Survival Analysis

Cancer	P-value	Q-value
LUSC	0.00028	Kaplan-Meier Survival Analysis
ESCA	0.025	Kaplan-Meier Survival Analysis
KIRP	0.011	Kaplan-Meier Survival Analysis
PAAD	0.0018	Kaplan-Meier Survival Analysis
BLCA	0.0033	Kaplan-Meier Survival Analysis
UCEC	0.029	Kaplan-Meier Survival Analysis
THCA	0.0029	Kaplan-Meier Survival Analysis
UVM	0.017	Kaplan-Meier Survival Analysis
OV	0.0043	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000134030 (Gene tree)
Gene ID: 9811
Gene Symbol: CTIF
Alias: KIAA0427
Full Name: cap binding complex dependent translation initiation factor
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 324,172 bases
Position: chr18:48,539,046-48,863,217
Accession: 23925
RBP type: canonical RBP
Summary: CTIF is a component of the CBP80 (NCBP1; MIM 600469)/CBP20 (NCBP2; MIM 605133) translation initiation complex that binds cotranscriptionally to the cap end of nascent mRNA. The CBP80/CBP20 complex is involved in a simultaneous editing and translation step that recognizes premature termination codons (PTCs) in mRNAs and directs PTC-containing mRNAs toward nonsense-mediated decay (NMD). On mRNAs without PTCs, the CBP80/CBP20 complex is replaced with cytoplasmic mRNA cap-binding proteins, including EIF4G (MIM 600495), and steady-state translation of the mRNAs resumes in the cytoplasm (Kim et al., 2009 [PubMed 19648179]).[supplied by OMIM, Dec 2009]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000256413	MIF4G	PF02854.19	1.4e-27	1	1
ENSP00000372459	MIF4G	PF02854.19	1.4e-27	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000591412	CTIF-210	491	-	ENSP00000467965	120 (aa)	-	K7EQS9
ENST00000589585	CTIF-207	564	-	-	- (aa)	-	-
ENST00000587860	CTIF-205	2940	-	-	- (aa)	-	-
ENST00000591387	CTIF-209	859	-	ENSP00000467425	138 (aa)	-	K7EPK6
ENST00000587752	CTIF-203	683	-	ENSP00000465405	194 (aa)	-	K7EK08
ENST00000256413	CTIF-201	5750	XM_006722586	ENSP00000256413	598 (aa)	XP_006722649	O43310
ENST00000382998	CTIF-202	4407	XM_005258392	ENSP00000372459	600 (aa)	XP_005258449	O43310
ENST00000592658	CTIF-211	952	-	-	- (aa)	-	-
ENST00000587769	CTIF-204	547	-	-	- (aa)	-	-
ENST00000588345	CTIF-206	584	-	ENSP00000467957	104 (aa)	-	K7EQS5
ENST00000590422	CTIF-208	412	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000134030's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000134030	Parkinson Disease	2.284914E-10	17052657
ENSG00000134030	Glucose	8.062870034116E-9	17903298
ENSG00000134030	Cholesterol, HDL	1.47448467274859E-7	17903299
ENSG00000134030	Receptors, Tumor Necrosis Factor	5.07816651189167E-5	17903293
ENSG00000134030	Echocardiography	1.37857032105798E-7	17903301
ENSG00000134030	Pancreatic Neoplasms	1.3800000E-004	19648918
ENSG00000134030	Iron	8.7100000E-005	19880490
ENSG00000134030	Leukoaraiosis	6.7447662E-005	-
ENSG00000134030	Leukoaraiosis	1.8532166E-005	-
ENSG00000134030	Leukoaraiosis	8.4689685E-005	-
ENSG00000134030	Platelet Function Tests	2.9200000E-006	-
ENSG00000134030	Platelet Function Tests	1.8200000E-006	-
ENSG00000134030	Child Development Disorders, Pervasive	9.8346500E-006	-
ENSG00000134030	Child Development Disorders, Pervasive	2.3029500E-005	-
ENSG00000134030	Vital Capacity	6E-6	24023788
ENSG00000134030	Antineoplastic Agents	9E-6	27047539
ENSG00000134030	Cell Survival	9E-6	27047539
ENSG00000134030	Ovarian Neoplasms	9E-6	27047539
ENSG00000134030	Immunoglobulins	7E-6	23382691
ENSG00000134030	Immunoglobulins	8E-6	23382691
ENSG00000134030	Immunoglobulins	3E-6	23382691
ENSG00000134030	Migraine Disorders	2E-6	23793025

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000134030	rs78415359	18	48680897	A	Red blood cell count	27863252	[0.044-0.084] unit decrease	0.06412393	EFO_0004305
ENSG00000134030	rs8093350	18	48811845	?	Circulating odd-numbered chain saturated fatty acid levels (C15:0)	29738550	[0.0021-0.0053] unit decrease	0.0037	EFO_0005110
ENSG00000134030	rs2337110	18	48814319	?	Circulating odd-numbered chain saturated fatty acid levels (C15:0)	29738550	[0.0024-0.0056] unit decrease	0.004	EFO_0005110
ENSG00000134030	rs8091660	18	48561565	?	Response to carboplatin in ovarian cancer (MTT IC50)	27047539			EFO_0004647\|EFO_0001075\|EFO_0006952
ENSG00000134030	rs12455557	18	48790717	?	Lung function (FVC)	24023788			EFO_0004312
ENSG00000134030	rs9947954	18	48714340	C	IgG glycosylation	23382691	[0.078-0.201] unit decrease	0.1398	EFO_0005193
ENSG00000134030	rs16949825	18	48701073	C	IgG glycosylation	23382691	[0.15-0.36] unit increase	0.2547	EFO_0005193
ENSG00000134030	rs16949825	18	48701073	C	IgG glycosylation	23382691	[0.14-0.35] unit increase	0.2457	EFO_0005193
ENSG00000134030	rs7227892	18	48810331	?	Migraine with aura	23793025	[1.08-1.19]	1.14	EFO_0003821
ENSG00000134030	rs41336052	18	48542730	?	Adolescent idiopathic scoliosis	30019117			EFO_0005423
ENSG00000134030	rs74450593	18	48832416	A	Male-pattern baldness	30573740	[0.029-0.058] unit increase	0.0437249	EFO_0007825
ENSG00000134030	rs299741	18	48672119	A	Automobile speeding propensity	30643258	[0.0081-0.017] unit decrease	0.012548543	EFO_0008579
ENSG00000134030	rs3786178	18	48622676	A	Lumbar spine bone mineral density (integral)	27476799	[0.11-0.27] unit increase	0.192	EFO_0007620
ENSG00000134030	rs62103293	18	48804283	?	White blood cell count	30595370			EFO_0004308
ENSG00000134030	rs78415359	18	48680897	?	Red blood cell count	30595370			EFO_0004305
ENSG00000134030	rs7227892	18	48810331	?	Red blood cell count	30595370			EFO_0004305
ENSG00000134030	rs4939821	18	48845622	?	Smoking status	30595370			EFO_0006527

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000134030's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000134030	CTIF	100	65.468	ENSAPOG00000020192	ctif	99	58.347	Acanthochromis_polyacanthus
ENSG00000134030	CTIF	87	95.969	ENSAMEG00000006759	CTIF	82	95.969	Ailuropoda_melanoleuca
ENSG00000134030	CTIF	100	53.343	ENSACIG00000017099	ctif	99	54.196	Amphilophus_citrinellus
ENSG00000134030	CTIF	100	54.008	ENSAOCG00000014275	ctif	99	54.161	Amphiprion_ocellaris
ENSG00000134030	CTIF	99	55.014	ENSAPEG00000016975	ctif	99	57.143	Amphiprion_percula
ENSG00000134030	CTIF	100	55.441	ENSATEG00000016752	ctif	99	55.982	Anabas_testudineus
ENSG00000134030	CTIF	100	76.672	ENSACAG00000018006	CTIF	100	76.827	Anolis_carolinensis
ENSG00000134030	CTIF	100	97.423	ENSANAG00000024925	CTIF	100	97.162	Aotus_nancymaae
ENSG00000134030	CTIF	99	56.278	ENSACLG00000005956	ctif	99	56.701	Astatotilapia_calliptera
ENSG00000134030	CTIF	100	58.051	ENSAMXG00000015964	ctif	100	52.699	Astyanax_mexicanus
ENSG00000134030	CTIF	100	94.203	ENSBTAG00000018901	CTIF	100	92.642	Bos_taurus
ENSG00000134030	CTIF	100	97.938	ENSCJAG00000004729	CTIF	100	97.837	Callithrix_jacchus
ENSG00000134030	CTIF	100	97.938	ENSCAFG00000019076	CTIF	100	95.833	Canis_familiaris
ENSG00000134030	CTIF	100	97.938	ENSCAFG00020026482	CTIF	100	96.000	Canis_lupus_dingo
ENSG00000134030	CTIF	100	96.392	ENSCHIG00000014455	CTIF	100	92.679	Capra_hircus
ENSG00000134030	CTIF	90	84.259	ENSTSYG00000030461	CTIF	99	84.259	Carlito_syrichta
ENSG00000134030	CTIF	100	86.023	ENSCAPG00000011865	CTIF	100	85.644	Cavia_aperea
ENSG00000134030	CTIF	100	91.176	ENSCPOG00000001049	CTIF	100	91.176	Cavia_porcellus
ENSG00000134030	CTIF	100	97.671	ENSCCAG00000022758	CTIF	100	97.671	Cebus_capucinus
ENSG00000134030	CTIF	100	99.485	ENSCATG00000038134	CTIF	100	98.997	Cercocebus_atys
ENSG00000134030	CTIF	100	96.410	ENSCLAG00000008174	CTIF	100	94.491	Chinchilla_lanigera
ENSG00000134030	CTIF	100	98.333	ENSCSAG00000018021	CTIF	100	96.580	Chlorocebus_sabaeus
ENSG00000134030	CTIF	100	85.915	ENSCPBG00000025654	CTIF	100	83.085	Chrysemys_picta_bellii
ENSG00000134030	CTIF	100	99.485	ENSCANG00000030916	CTIF	100	98.833	Colobus_angolensis_palliatus
ENSG00000134030	CTIF	100	93.144	ENSCGRG00001020158	Ctif	100	93.144	Cricetulus_griseus_chok1gshd
ENSG00000134030	CTIF	100	89.855	ENSCGRG00000000052	Ctif	100	86.452	Cricetulus_griseus_crigri
ENSG00000134030	CTIF	100	47.586	ENSCSEG00000019857	ctif	99	53.980	Cynoglossus_semilaevis
ENSG00000134030	CTIF	99	53.619	ENSCVAG00000017158	ctif	99	55.539	Cyprinodon_variegatus
ENSG00000134030	CTIF	100	54.342	ENSDARG00000090617	ctif	100	56.734	Danio_rerio
ENSG00000134030	CTIF	72	93.256	ENSDNOG00000037310	CTIF	99	93.256	Dasypus_novemcinctus
ENSG00000134030	CTIF	100	93.478	ENSDORG00000003221	Ctif	100	93.000	Dipodomys_ordii
ENSG00000134030	CTIF	100	97.938	ENSEASG00005016094	CTIF	100	95.652	Equus_asinus_asinus
ENSG00000134030	CTIF	100	97.423	ENSECAG00000020473	CTIF	100	95.819	Equus_caballus
ENSG00000134030	CTIF	90	84.074	ENSEEUG00000012451	CTIF	100	84.074	Erinaceus_europaeus
ENSG00000134030	CTIF	100	70.714	ENSELUG00000008733	ctif	99	61.576	Esox_lucius
ENSG00000134030	CTIF	100	97.115	ENSFCAG00000000664	CTIF	100	95.667	Felis_catus
ENSG00000134030	CTIF	97	83.276	ENSFALG00000008943	CTIF	97	83.276	Ficedula_albicollis
ENSG00000134030	CTIF	100	96.907	ENSFDAG00000017379	CTIF	100	92.951	Fukomys_damarensis
ENSG00000134030	CTIF	100	59.712	ENSFHEG00000004334	ctif	99	57.374	Fundulus_heteroclitus
ENSG00000134030	CTIF	100	80.592	ENSGALG00000035912	-	100	80.592	Gallus_gallus
ENSG00000134030	CTIF	100	60.577	ENSGAFG00000011896	ctif	99	56.894	Gambusia_affinis
ENSG00000134030	CTIF	68	79.259	ENSGAGG00000020663	CTIF	97	79.000	Gopherus_agassizii
ENSG00000134030	CTIF	100	100.000	ENSGGOG00000015204	CTIF	100	99.667	Gorilla_gorilla
ENSG00000134030	CTIF	99	56.425	ENSHBUG00000018092	ctif	99	56.848	Haplochromis_burtoni
ENSG00000134030	CTIF	100	97.115	ENSHGLG00000005663	CTIF	100	94.649	Heterocephalus_glaber_female
ENSG00000134030	CTIF	100	96.392	ENSHGLG00100006976	CTIF	100	94.482	Heterocephalus_glaber_male
ENSG00000134030	CTIF	100	60.377	ENSHCOG00000011784	ctif	99	56.792	Hippocampus_comes
ENSG00000134030	CTIF	100	55.735	ENSIPUG00000014050	ctif	99	54.830	Ictalurus_punctatus
ENSG00000134030	CTIF	100	94.203	ENSSTOG00000001967	CTIF	100	93.667	Ictidomys_tridecemlineatus
ENSG00000134030	CTIF	100	94.203	ENSJJAG00000013706	Ctif	100	90.630	Jaculus_jaculus
ENSG00000134030	CTIF	99	53.982	ENSKMAG00000014651	ctif	99	55.015	Kryptolebias_marmoratus
ENSG00000134030	CTIF	100	61.151	ENSLBEG00000018277	ctif	99	61.011	Labrus_bergylta
ENSG00000134030	CTIF	100	63.596	ENSLOCG00000011697	ctif	100	64.654	Lepisosteus_oculatus
ENSG00000134030	CTIF	100	84.135	ENSLAFG00000016335	CTIF	100	98.502	Loxodonta_africana
ENSG00000134030	CTIF	100	99.485	ENSMFAG00000037903	CTIF	100	99.000	Macaca_fascicularis
ENSG00000134030	CTIF	100	99.485	ENSMMUG00000020898	CTIF	100	98.997	Macaca_mulatta
ENSG00000134030	CTIF	100	99.485	ENSMNEG00000039395	CTIF	100	98.997	Macaca_nemestrina
ENSG00000134030	CTIF	100	99.485	ENSMLEG00000041132	CTIF	100	99.167	Mandrillus_leucophaeus
ENSG00000134030	CTIF	99	56.380	ENSMAMG00000014741	ctif	99	57.249	Mastacembelus_armatus
ENSG00000134030	CTIF	100	48.333	ENSMZEG00005019767	ctif	90	53.443	Maylandia_zebra
ENSG00000134030	CTIF	100	65.957	ENSMGAG00000001378	CTIF	100	55.473	Meleagris_gallopavo
ENSG00000134030	CTIF	100	92.667	ENSMAUG00000000656	Ctif	100	92.667	Mesocricetus_auratus
ENSG00000134030	CTIF	100	99.038	ENSMICG00000010167	CTIF	100	95.667	Microcebus_murinus
ENSG00000134030	CTIF	100	92.500	ENSMOCG00000020507	Ctif	100	92.500	Microtus_ochrogaster
ENSG00000134030	CTIF	99	53.791	ENSMMOG00000000831	ctif	99	53.879	Mola_mola
ENSG00000134030	CTIF	100	84.615	ENSMODG00000003464	CTIF	100	81.032	Monodelphis_domestica
ENSG00000134030	CTIF	84	54.143	ENSMALG00000020553	ctif	99	54.335	Monopterus_albus
ENSG00000134030	CTIF	100	94.928	MGP_CAROLIEiJ_G0022408	Ctif	100	90.177	Mus_caroli
ENSG00000134030	CTIF	100	95.652	ENSMUSG00000052928	Ctif	100	90.048	Mus_musculus
ENSG00000134030	CTIF	100	94.928	MGP_PahariEiJ_G0019137	Ctif	100	92.654	Mus_pahari
ENSG00000134030	CTIF	100	95.652	MGP_SPRETEiJ_G0023321	Ctif	100	89.888	Mus_spretus
ENSG00000134030	CTIF	100	97.423	ENSMPUG00000000844	CTIF	100	96.500	Mustela_putorius_furo
ENSG00000134030	CTIF	100	94.231	ENSMLUG00000003025	CTIF	100	93.980	Myotis_lucifugus
ENSG00000134030	CTIF	100	97.423	ENSNGAG00000011452	Ctif	100	95.167	Nannospalax_galili
ENSG00000134030	CTIF	99	56.573	ENSNBRG00000008679	ctif	99	56.996	Neolamprologus_brichardi
ENSG00000134030	CTIF	100	100.000	ENSNLEG00000011503	CTIF	100	99.167	Nomascus_leucogenys
ENSG00000134030	CTIF	100	78.536	ENSMEUG00000000218	CTIF	100	78.536	Notamacropus_eugenii
ENSG00000134030	CTIF	100	90.385	ENSOPRG00000003558	CTIF	100	89.000	Ochotona_princeps
ENSG00000134030	CTIF	100	95.897	ENSODEG00000018390	CTIF	100	89.855	Octodon_degus
ENSG00000134030	CTIF	100	62.500	ENSONIG00000007750	ctif	99	62.885	Oreochromis_niloticus
ENSG00000134030	CTIF	85	69.788	ENSOANG00000001337	CTIF	100	70.035	Ornithorhynchus_anatinus
ENSG00000134030	CTIF	100	91.346	ENSOCUG00000024842	CTIF	100	91.167	Oryctolagus_cuniculus
ENSG00000134030	CTIF	100	65.468	ENSORLG00000005786	ctif	99	58.481	Oryzias_latipes
ENSG00000134030	CTIF	100	64.029	ENSORLG00020005385	ctif	99	58.106	Oryzias_latipes_hni
ENSG00000134030	CTIF	100	65.385	ENSORLG00015011872	ctif	99	57.074	Oryzias_latipes_hsok
ENSG00000134030	CTIF	99	55.147	ENSOMEG00000007917	ctif	99	55.507	Oryzias_melastigma
ENSG00000134030	CTIF	100	97.115	ENSOGAG00000013927	CTIF	100	95.485	Otolemur_garnettii
ENSG00000134030	CTIF	100	96.907	ENSOARG00000003754	CTIF	100	93.167	Ovis_aries
ENSG00000134030	CTIF	100	100.000	ENSPPAG00000023554	CTIF	100	100.000	Pan_paniscus
ENSG00000134030	CTIF	100	96.392	ENSPPRG00000002265	CTIF	100	95.500	Panthera_pardus
ENSG00000134030	CTIF	100	96.907	ENSPTIG00000013761	CTIF	100	95.333	Panthera_tigris_altaica
ENSG00000134030	CTIF	100	100.000	ENSPTRG00000010009	CTIF	100	99.833	Pan_troglodytes
ENSG00000134030	CTIF	100	99.485	ENSPANG00000017087	CTIF	100	99.167	Papio_anubis
ENSG00000134030	CTIF	85	64.062	ENSPKIG00000011234	ctif	100	64.510	Paramormyrops_kingsleyae
ENSG00000134030	CTIF	100	80.134	ENSPSIG00000006508	CTIF	100	80.134	Pelodiscus_sinensis
ENSG00000134030	CTIF	100	50.144	ENSPMGG00000022958	ctif	99	50.000	Periophthalmus_magnuspinnatus
ENSG00000134030	CTIF	100	93.012	ENSPEMG00000022746	Ctif	100	93.012	Peromyscus_maniculatus_bairdii
ENSG00000134030	CTIF	76	85.777	ENSPCIG00000026247	CTIF	95	85.526	Phascolarctos_cinereus
ENSG00000134030	CTIF	100	64.029	ENSPFOG00000009243	ctif	99	61.338	Poecilia_formosa
ENSG00000134030	CTIF	100	62.590	ENSPLAG00000019171	ctif	99	58.294	Poecilia_latipinna
ENSG00000134030	CTIF	99	53.902	ENSPMEG00000020089	ctif	99	55.058	Poecilia_mexicana
ENSG00000134030	CTIF	99	50.989	ENSPREG00000017326	ctif	99	52.883	Poecilia_reticulata
ENSG00000134030	CTIF	85	98.225	ENSPPYG00000009147	CTIF	100	98.614	Pongo_abelii
ENSG00000134030	CTIF	100	99.038	ENSPCOG00000013391	CTIF	100	93.854	Propithecus_coquereli
ENSG00000134030	CTIF	100	95.408	ENSPVAG00000001965	CTIF	100	94.186	Pteropus_vampyrus
ENSG00000134030	CTIF	100	64.029	ENSPNYG00000007879	ctif	99	60.984	Pundamilia_nyererei
ENSG00000134030	CTIF	100	56.560	ENSPNAG00000029174	ctif	100	57.749	Pygocentrus_nattereri
ENSG00000134030	CTIF	100	94.203	ENSRNOG00000018342	Ctif	100	93.144	Rattus_norvegicus
ENSG00000134030	CTIF	100	99.485	ENSRBIG00000043937	CTIF	100	98.500	Rhinopithecus_bieti
ENSG00000134030	CTIF	100	99.038	ENSRROG00000006039	CTIF	100	98.500	Rhinopithecus_roxellana
ENSG00000134030	CTIF	100	97.423	ENSSBOG00000028468	CTIF	100	97.162	Saimiri_boliviensis_boliviensis
ENSG00000134030	CTIF	100	85.577	ENSSHAG00000016321	CTIF	100	80.801	Sarcophilus_harrisii
ENSG00000134030	CTIF	100	62.537	ENSSFOG00015022594	ctif	100	62.979	Scleropages_formosus
ENSG00000134030	CTIF	100	65.468	ENSSMAG00000005707	ctif	99	58.696	Scophthalmus_maximus
ENSG00000134030	CTIF	99	67.500	ENSSDUG00000016033	ctif	93	67.500	Seriola_dumerili
ENSG00000134030	CTIF	100	51.667	ENSSLDG00000007282	ctif	99	56.399	Seriola_lalandi_dorsalis
ENSG00000134030	CTIF	100	85.507	ENSSPUG00000014734	CTIF	100	83.946	Sphenodon_punctatus
ENSG00000134030	CTIF	100	65.468	ENSSPAG00000003721	ctif	99	59.968	Stegastes_partitus
ENSG00000134030	CTIF	100	97.115	ENSSSCG00000004506	CTIF	100	94.983	Sus_scrofa
ENSG00000134030	CTIF	100	85.507	ENSTGUG00000000030	CTIF	100	79.936	Taeniopygia_guttata
ENSG00000134030	CTIF	100	65.385	ENSTNIG00000018763	ctif	99	61.311	Tetraodon_nigroviridis
ENSG00000134030	CTIF	81	94.048	ENSTBEG00000002613	CTIF	100	74.167	Tupaia_belangeri
ENSG00000134030	CTIF	100	94.203	ENSTTRG00000004347	CTIF	100	91.500	Tursiops_truncatus
ENSG00000134030	CTIF	100	97.938	ENSUAMG00000007299	CTIF	88	95.703	Ursus_americanus
ENSG00000134030	CTIF	100	97.938	ENSUMAG00000002735	CTIF	100	96.488	Ursus_maritimus
ENSG00000134030	CTIF	81	94.048	ENSVPAG00000001497	-	75	79.399	Vicugna_pacos
ENSG00000134030	CTIF	100	97.938	ENSVVUG00000014347	CTIF	100	95.667	Vulpes_vulpes
ENSG00000134030	CTIF	100	72.381	ENSXETG00000026836	ctif	97	63.574	Xenopus_tropicalis
ENSG00000134030	CTIF	63	57.828	ENSXCOG00000002477	ctif	91	56.057	Xiphophorus_couchianus
ENSG00000134030	CTIF	100	64.029	ENSXMAG00000004236	ctif	99	58.085	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	19648179.	IMP	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005515	protein binding	19648179.	IPI	Function
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	IDA	Component
GO:0006446	regulation of translational initiation	21873635.	IBA	Process
GO:0006446	regulation of translational initiation	19648179.	IMP	Process
GO:0008494	translation activator activity	21873635.	IBA	Function
GO:0045727	positive regulation of translation	-	IEA	Process
GO:0048471	perinuclear region of cytoplasm	19648179.	IDA	Component

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.