EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
22144583MicroRNA-200c represses migration and invasion of breast cancer cells by targeting actin-regulatory proteins FHOD1 and PPM1F.Mol Cell Biol2012 FebJurmeister Sdoi: 10.1128/MCB.06212-11

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1667234215SilentnovelP496P0.5
BLCAchr1667229945Missense_MutationnovelS1087F0.31
BLCAchr16672474175'UTRnovel0.39
BLCAchr1667229894Missense_MutationNAS1104L0.05
BLCAchr1667239444Missense_MutationNAC71S0.13
BLCAchr1667230225Missense_MutationNAE1019Q0.07
BLCAchr1667231231Missense_MutationNAS875C0.13
BLCAchr1667230063Splice_Regionnovel0.3
BLCAchr1667237274Missense_MutationNAD320N0.28
BLCAchr1667229709Missense_Mutationrs762626115T1141M0.14
BLCAchr1667247271Missense_MutationnovelG47E0.73
BLCAchr16672295833'UTRnovel0.3
BLCAchr1667229686Missense_MutationnovelD1149N0.24
BRCAchr1667237706SilentnovelN235N0.11
BRCAchr1667231708Missense_MutationNAA772S0.42
BRCAchr1667231808SilentNAT738T0.11
BRCAchr1667236637SilentnovelG413G0.14
BRCAchr1667234116Missense_MutationNAI529M0.45
BRCAchr16672296113'UTRnovel0.75
BRCAchr1667237679SilentnovelV244V0.07
BRCAchr1667229705Missense_MutationNAL1142F0.23
BRCAchr1667231523SilentNAL804L0.14
BRCAchr1667247395Missense_MutationNAD6Y0.13
CESCchr1667231344SilentNAS837S0.18
CESCchr1667234177Missense_Mutationrs771435032R509Q0.32
CESCchr1667234375Missense_MutationNAE473K0.31
CESCchr1667229874Missense_MutationNAL1111V0.34
CESCchr1667230132Missense_MutationNAH1050N0.26
CESCchr1667230215Nonsense_MutationNAS1022*0.18
CESCchr1667234466SilentnovelR442R0.15
CESCchr1667238377Splice_Regionrs7513681960.3
CESCchr1667234093Missense_MutationnovelP537H0.3
CESCchr1667229844Missense_MutationnovelR1121C0.33
CESCchr1667237308SilentNAA308A0.51
CESCchr1667236999Missense_MutationnovelG370D0.17
CESCchr1667237537SilentnovelL263L0.11
COADchr1667237739Frame_Shift_InsNAL225Afs*460.24
COADchr1667238090Missense_MutationNAG196R0.19
COADchr1667234365Missense_Mutationrs373548373G476E0.45
COADchr1667236620Missense_MutationnovelN419I0.11
COADchr1667238614Intronnovel0.5
COADchr1667230403Missense_Mutationrs747061959R988W0.36
COADchr1667230402Missense_MutationnovelR988Q0.22
COADchr1667237536Missense_MutationNAL263P0.25
COADchr1667236720Missense_MutationNAA386T0.33
COADchr1667230111SilentnovelL1057L0.35
COADchr1667236982Missense_MutationNAR376C0.39
COADchr1667231343Missense_MutationnovelG838S0.26
COADchr1667236606Missense_Mutationrs765946969I424V0.32
COADchr1667237320Missense_MutationnovelQ304H0.27
COADchr1667237070SilentnovelG346G0.38
COADchr1667237298Missense_MutationNAR312C0.33
COADchr1667237060Missense_MutationnovelR350W0.15
COADchr1667237764Missense_Mutationrs766104962R216H0.18
COADchr1667238305Missense_MutationNAE148D0.08
COADchr1667236679SilentNAL399L0.37
COADchr1667231207Missense_MutationnovelA883V0.11
COADchr1667234178Nonsense_Mutationrs369969027R509*0.14
COADchr1667236982Missense_MutationNAR376C0.44
COADchr1667236667Silentrs746990896P403P0.37
COADchr1667232137Missense_Mutationrs773788569A702T0.22
COADchr1667234193SilentNAL504L0.26
COADchr1667238912Missense_MutationNAA122T0.16
COADchr1667230394SilentnovelR991R0.35
ESCAchr1667230625Missense_MutationnovelI945T0.76
ESCAchr1667231785Missense_Mutationrs774658881R746Q0.36
ESCAchr1667232078SilentnovelL721L0.05
ESCAchr1667234155SilentnovelK516K0.17
GBMchr1667236573Missense_Mutationrs774140986E435K0.29
GBMchr1667238756Intronnovel0.33
GBMchr1667233758Missense_MutationnovelP649S0.14
GBMchr1667238756Intronnovel0.23
GBMchr1667237496Nonsense_MutationnovelY276*0.18
GBMchr1667237547SilentnovelL259L0.11
HNSCchr1667237352Frame_Shift_InsnovelF294Gfs*290.18
HNSCchr1667229810Missense_Mutationrs777850281R1132H0.25
HNSCchr1667230465Missense_Mutationrs190207170A967V0.24
HNSCchr1667238414Missense_Mutationrs754648916R136H0.21
HNSCchr1667238269SilentnovelE160E0.36
HNSCchr1667233985Nonsense_MutationnovelS573*0.11
HNSCchr1667231191SilentnovelA888A0.15
HNSCchr1667230711SilentnovelL916L0.21
HNSCchr1667238273Missense_Mutationrs372756034S159L0.14
HNSCchr1667238448Splice_SitenovelX125_splice0.14
HNSCchr1667229906Missense_MutationnovelP1100H0.29
HNSCchr1667238363Intronnovel0.11
HNSCchr1667238364Intronnovel0.11
KIRCchr1667230426Missense_Mutationrs772896045L980P0.14
KIRCchr1667231276Missense_MutationNAL860R0.13
KIRPchr1667230457Missense_Mutationrs746053817E970K0.15
LGGchr1667230351Missense_MutationNAR1005H0.17
LGGchr1667230447Missense_MutationnovelI973S0.32
LGGchr16672295673'UTRnovel0.29
LGGchr1667231317In_Frame_DelnovelK846del0.48
LGGchr1667230388Nonsense_MutationnovelR993*0.38
LGGchr1667238129Splice_SitenovelX183_splice0.07
LGGchr1667238434SilentnovelS129S0.52
LGGchr1667234088Missense_MutationnovelL539F0.39
LIHCchr1667234086SilentNAL539L0.33
LIHCchr1667247270SilentnovelG47G0.21
LIHCchr1667231227SilentnovelD876D0.77
LIHCchr1667229897Missense_MutationnovelT1103I0.29
LIHCchr1667230444Missense_MutationnovelM974T0.25
LUADchr16672474715'UTRnovel0.43
LUADchr1667247324Missense_MutationNAF29L0.46
LUADchr1667230437Missense_MutationNAF976L0.1
LUADchr1667237322Missense_MutationnovelQ304E0.24
LUADchr16672474715'UTRnovel0.16
LUADchr1667234029SilentNAL558L0.1
LUADchr16672295883'UTRnovel0.42
LUADchr1667237302SilentnovelV310V0.13
LUADchr1667237481Missense_MutationnovelI281M0.17
LUADchr1667231240Missense_MutationNAP872R0.26
LUADchr1667231767Missense_MutationNAA752V0.27
LUSCchr1667231730Silentrs138688169A764A0.47
LUSCchr1667238342Intronnovel0.14
LUSCchr1667230195Missense_MutationnovelP1029A0.39
LUSCchr1667238249Missense_MutationnovelR167L0.71
LUSCchr1667230617Missense_MutationnovelR948C0.19
LUSCchr1667234123Missense_Mutationrs2271290E527G0.21
LUSCchr1667233978SilentnovelP575P0.55
LUSCchr1667231778SilentnovelK748K0.34
LUSCchr1667230491SilentnovelL958L0.72
LUSCchr1667230118Missense_MutationNAK1054N0.15
OVchr1667237036Missense_MutationnovelS358P0.44
OVchr1667237309Frame_Shift_DelnovelA308Gfs*270.25
OVchr1667247263Missense_MutationNAP50A0.63
OVchr1667237374Silentrs752207424A286A0.54
OVchr1667238528Intronnovel0.16
OVchr1667238045Missense_MutationnovelC211R0.12
PAADchr1667239367Missense_MutationnovelG97S0.11
PRADchr1667237056Missense_Mutationrs766805526R351Q0.45
PRADchr1667230184SilentNAP1032P0.33
PRADchr1667238883Intronnovel0.07
PRADchr1667232137Missense_Mutationrs773788569A702T0.08
PRADchr1667230476SilentNAY963Y0.14
PRADchr1667230665Missense_MutationNAF932L0.15
PRADchr1667229823Missense_MutationnovelR1128C0.39
READchr1667237258Missense_MutationNAT325M0.32
SARCchr1667236628SilentnovelA416A0.54
SKCMchr1667233961Frame_Shift_DelnovelG581Efs*470.35
SKCMchr1667231272SilentNAH861H0.4
SKCMchr1667238208Missense_MutationNAL181F0.89
SKCMchr1667230479SilentNAG962G0.33
SKCMchr16672474195'UTRnovel0.38
SKCMchr16672474205'UTRnovel0.35
SKCMchr1667236656Missense_MutationnovelP407L0.33
SKCMchr1667230149Missense_Mutationrs746584932R1044Q0.31
SKCMchr1667233925Missense_MutationNAP593L0.81
SKCMchr1667230682Missense_Mutationrs750277750R926H0.26
SKCMchr1667234116SilentNAI529I0.52
SKCMchr1667231296Silentrs143498229T853T0.38
SKCMchr1667237687Missense_MutationNAR242S0.3
SKCMchr1667247395Missense_MutationNAD6N0.29
SKCMchr1667239427Missense_MutationNAP77S0.12
SKCMchr1667230225Missense_MutationNAE1019K0.7
SKCMchr1667230362SilentNAQ1001Q0.29
SKCMchr1667229889Missense_MutationNAE1106K0.33
SKCMchr1667232152Missense_MutationnovelP697S0.5
SKCMchr1667232153SilentnovelD696D0.49
SKCMchr1667229881Missense_MutationNAM1108I0.19
SKCMchr1667230627Silentrs111846078R944R0.36
STADchr1667229882Missense_Mutationrs757132766M1108T0.23
STADchr1667231639Missense_Mutationrs772102709R795W0.3
STADchr1667234183Missense_MutationNAA507V0.26
STADchr1667233752Missense_Mutationrs143431266A651T0.23
STADchr1667237012Missense_MutationNAR366C0.52
STADchr1667230457Missense_Mutationrs746053817E970K0.17
STADchr1667237014Missense_MutationnovelR365H0.33
STADchr1667237297Missense_MutationnovelR312H0.25
STADchr1667236997Missense_MutationNAG371R0.05
STADchr1667238457Intronnovel0.41
STADchr1667237730SilentNAL227L0.05
STADchr1667230351Missense_MutationNAR1005H0.09
STADchr1667237658Splice_RegionNAT251T0.07
STADchr1667231292Missense_Mutationrs772252359R855C0.1
STADchr1667237742Silentrs373272675L223L0.22
UCECchr1667247338Missense_MutationnovelD25Y0.33
UCECchr16672295533'UTRnovel0.2
UCECchr1667231786Missense_Mutationrs761974488R746W0.16
UCECchr1667238411Missense_Mutationrs779437165R137H0.22
UCECchr1667238913Silentrs751354160N121N0.48
UCECchr1667247337Missense_MutationnovelD25G0.08
UCECchr1667238843Intronnovel0.36
UCECchr1667231231Missense_Mutationrs757925016S875F0.57
UCECchr1667231796SilentnovelT742T0.21
UCECchr1667236666Missense_MutationnovelA404T0.41
UCECchr1667229708Silentrs200812024T1141T0.51
UCECchr1667229916Missense_MutationnovelS1097T0.09
UCECchr1667230410SilentnovelL985L0.18
UCECchr1667237236Splice_Regionnovel0.32
UCECchr1667236691SilentnovelT395T0.52
UCECchr1667238313Splice_Regionnovel0.18
UCECchr1667238791Intronnovel0.09
UCECchr1667234452Missense_MutationNAV447A0.18
UCECchr1667238478Intronnovel0.04
UCECchr1667229802Missense_Mutationrs770847586R1135C0.34
UCECchr1667236639Missense_Mutationrs780244054G413S0.29
UCECchr1667230628Missense_MutationnovelR944K0.16
UCECchr1667236983SilentnovelA375A0.08
UCECchr1667229643Missense_MutationNAE1163G0.51
UCECchr1667231291Missense_Mutationrs748331837R855H0.36
UCECchr1667234422Missense_Mutationrs761027309A457V0.25
UCECchr1667234178Nonsense_Mutationrs369969027R509*0.46
UCECchr1667238888Intronnovel0.06
UCECchr1667236639Missense_MutationNAG413C0.23
UCECchr1667230645SilentnovelR938R0.34
UCECchr1667232055Missense_MutationnovelS729N0.25
UCECchr1667237110Missense_MutationnovelA333V0.28
UCECchr1667230616Missense_MutationNAR948H0.41
UCECchr1667237011Missense_Mutationrs781228896R366H0.45
UCECchr1667238736Intronnovel0.56
UCECchr1667237261Missense_MutationNAR324H0.43
UCECchr1667237570Splice_SiteNAX252_splice0.39
UCECchr1667231759Missense_MutationnovelA755S0.51
UCECchr1667229811Missense_Mutationrs775105803R1132C0.32
UCECchr1667231714Missense_MutationnovelT770A0.07
UCECchr1667236648Missense_MutationnovelP410T0.42
UCECchr1667238096Missense_MutationnovelM194V0.42
UCECchr1667230192Frame_Shift_Insrs762098881S1030Qfs*190.23
UCECchr1667230617Missense_MutationnovelR948C0.43
UCECchr1667237261Missense_MutationNAR324H0.42
UCECchr1667233867SilentnovelH612H0.43
UCECchr1667234134SilentnovelS523S0.08
UCECchr1667231291Missense_Mutationrs748331837R855H0.14
UCECchr1667229947SilentNAP1086P0.04
UCECchr1667239455Splice_SitenovelX68_splice0.5
UCECchr1667230217Missense_MutationNAF1021L0.58
UCECchr1667234215SilentnovelP496P0.35
UCECchr1667238277Missense_MutationnovelH158Y0.29
UCECchr1667229810Missense_Mutationrs777850281R1132H0.3
UCECchr1667231344SilentNAS837S0.25
UCECchr1667237747Missense_MutationNAA222T0.29
UCECchr1667234055Missense_MutationnovelG550W0.23
UCECchr1667237047Missense_MutationnovelR354Q0.61
UCECchr1667236690Missense_Mutationrs775259952G396S0.32
UCECchr1667237674Missense_MutationnovelS246Y0.48
UCECchr16672294143'UTRnovel0.19
UCECchr1667231241Missense_MutationnovelP872S0.21
UCECchr1667247402SilentnovelG3G0.42
UCECchr1667239381Missense_Mutationrs757610175R92Q0.67
UCECchr1667236992Frame_Shift_InsnovelC373Lfs*590.35
UCECchr1667238777Intronnovel0.17
UCECchr1667237380Splice_Regionrs147795243T284T0.35

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCAAMP0.18140.063591
CHOLDEL0.16670.23475
LAMLDEL0.03140.0010312
TGCTAMP0.120.035574
UCECDEL0.27834.7164e-05

Survival Analysis
CancerP-value Q-value
THYM0.032

Kaplan-Meier Survival Analysis

KIRC0.0031

Kaplan-Meier Survival Analysis

SARC0.0015

Kaplan-Meier Survival Analysis

MESO0.022

Kaplan-Meier Survival Analysis

ACC0.003

Kaplan-Meier Survival Analysis

HNSC0.016

Kaplan-Meier Survival Analysis

SKCM0.0049

Kaplan-Meier Survival Analysis

PRAD0.022

Kaplan-Meier Survival Analysis

LUSC0.00083

Kaplan-Meier Survival Analysis

BRCA0.014

Kaplan-Meier Survival Analysis

KIRP0.0039

Kaplan-Meier Survival Analysis

COAD0.016

Kaplan-Meier Survival Analysis

CESC0.004

Kaplan-Meier Survival Analysis

UCEC0.0083

Kaplan-Meier Survival Analysis

GBM0.041

Kaplan-Meier Survival Analysis

DLBC0.049

Kaplan-Meier Survival Analysis

THCA0.012

Kaplan-Meier Survival Analysis

UVM0.048

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000135723 (Gene tree)
Gene ID
29109
Gene Symbol
FHOD1
Alias
FHOS
Full Name
formin homology 2 domain containing 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
18,272 bases
Position
chr16:67,229,387-67,247,658
Accession
17905
RBP type
non-canonical RBP
Summary
This gene encodes a protein which is a member of the formin/diaphanous family of proteins. The gene is ubiquitously expressed but is found in abundance in the spleen. The encoded protein has sequence homology to diaphanous and formin proteins within the Formin Homology (FH)1 and FH2 domains. It also contains a coiled-coil domain, a collagen-like domain, two nuclear localization signals, and several potential PKC and PKA phosphorylation sites. It is a predominantly cytoplasmic protein and is expressed in a variety of human cell lines. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000569085FHOD1-209735--- (aa)--
ENST00000562266FHOD1-203486--- (aa)--
ENST00000569888FHOD1-210780--- (aa)--
ENST00000567509FHOD1-205563-ENSP00000462988108 (aa)-J3KTH7
ENST00000566006FHOD1-204673--- (aa)--
ENST00000567561FHOD1-206773-ENSP0000046280722 (aa)-J3KT53
ENST00000568595FHOD1-208520-ENSP0000046401128 (aa)-J3QR24
ENST00000258201FHOD1-2013990XM_011523043ENSP000002582011164 (aa)XP_011521345Q9Y613
ENST00000567752FHOD1-2074321--- (aa)--
ENST00000561922FHOD1-2022069-ENSP00000458085157 (aa)-H3BVE7
Gene Model
Click here to download ENSG00000135723's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000135723Cholesterol, HDL9.713e-00819060910
ENSG00000135723Child Development Disorders, Pervasive1.3191000E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000135723's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001725stress fiber15095401.IDAComponent
GO:0003779actin binding-IEAFunction
GO:0005515protein binding15095401.24880667.IPIFunction
GO:0005634nucleus15095401.IDAComponent
GO:0005737cytoplasm10352228.TASComponent
GO:0005829cytosol-IDAComponent
GO:0007097nuclear migration-IEAProcess
GO:0014704intercalated disc-IEAComponent
GO:0016020membrane19946888.HDAComponent
GO:0019904protein domain specific binding16361249.IPIFunction
GO:0032059bleb-IEAComponent
GO:0042802identical protein binding18239683.18786395.IPIFunction
GO:0043621protein self-association16361249.IMPFunction
GO:0045944positive regulation of transcription by RNA polymerase II15095401.IDAProcess
GO:0045944positive regulation of transcription by RNA polymerase II16361249.IMPProcess
GO:0051492regulation of stress fiber assembly16361249.IMPProcess
GO:0051496positive regulation of stress fiber assembly15095401.IDAProcess
GO:0051660establishment of centrosome localization-IEAProcess
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