EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1229632275Missense_MutationnovelL45I0.05
BLCAchr1229638163Missense_MutationnovelL1184V0.23
BLCAchr1229637776Missense_MutationnovelL1055F0.71
BLCAchr1229637700Missense_MutationnovelF1029L0.28
BLCAchr1229635097Missense_Mutationrs780581627E162K0.35
BLCAchr1229643550Nonsense_MutationNAQ1218*0.17
BLCAchr1229636107SilentNAL498L0.34
BLCAchr1229637197Missense_Mutationrs759945900E862K0.13
BLCAchr1229637921Missense_MutationNAS1103L0.19
BLCAchr1229637916SilentnovelL1101L0.51
BRCAchr1229637156Missense_MutationnovelV848D0.08
BRCAchr1229647662SilentNAV1353V0.14
BRCAchr1229637263Missense_MutationNAI884L0.25
BRCAchr1229637852Missense_MutationNAA1080D0.37
BRCAchr1229635024SilentNAV137V0.54
BRCAchr1229635126SilentnovelE171E0.14
BRCAchr1229654254Missense_MutationNAI1415V0.15Urb2
BRCAchr1229635521Missense_MutationnovelS303L0.19
BRCAchr12296593263'UTRnovel0.15
BRCAchr1229638118Missense_Mutationrs766954381A1169T0.2
BRCAchr1229637011Missense_MutationNAL800V0.23
BRCAchr1229635521Missense_MutationnovelS303L0.11
BRCAchr1229636125SilentnovelE504E0.23
BRCAchr1229635281Missense_MutationNAG223D0.53
CESCchr1229638244Missense_MutationnovelA1211P0.39
COADchr1229636700Missense_MutationNAA696V0.15
COADchr1229635760Missense_Mutationrs763894401E383K0.19
COADchr1229636377SilentNAP588P0.6
COADchr1229636389SilentnovelG592G0.09
COADchr1229637040SilentnovelS809S0.27
COADchr1229635028Missense_MutationnovelY139H0.23
COADchr12296593183'UTRrs7765341610.31
COADchr1229637158Missense_MutationnovelV849M0.17
COADchr1229636048Missense_Mutationrs767496560R479C0.27
COADchr1229659222SilentNAI1500I0.3
COADchr1229636995SilentnovelA794A0.35
COADchr1229647588Missense_MutationnovelL1329V0.31Urb2
COADchr1229637898In_Frame_DelNAG1096del0.45
COADchr1229637376SilentnovelL921L0.07
COADchr1229636313Missense_MutationnovelR567Q0.16
COADchr1229636513Missense_MutationNAL634I0.37
COADchr1229637885Missense_MutationNAV1091G0.25
COADchr1229638023Missense_MutationNAA1137V0.58
COADchr1229635974Missense_Mutationrs781217311R454H0.22
COADchr1229636293SilentNAT560T0.45
COADchr1229627745Missense_MutationNAP38T0.18
COADchr1229643586Missense_MutationnovelL1230V0.34
COADchr1229627674Missense_MutationNAS14N0.2
COADchr1229635536Missense_MutationnovelY308C0.08
COADchr1229636962SilentnovelE783E0.07
COADchr1229636295Missense_MutationnovelP561H0.27
ESCAchr1229638061Missense_MutationnovelH1150Y0.16
ESCAchr1229637441Missense_Mutationrs749450816T943M0.29
ESCAchr1229635831SilentnovelP406P0.25
ESCAchr1229635417SilentnovelT268T0.14
ESCAchr1229635719Missense_MutationnovelN369S0.44
ESCAchr1229645941Missense_Mutationrs772780409A1293V0.46
GBMchr1229637586Missense_MutationnovelD991E0.95
GBMchr1229636336Missense_MutationnovelM575L0.08
GBMchr1229636630Missense_MutationnovelC673S0.1
GBMchr1229637447Missense_MutationnovelC945F0.03
GBMchr1229636899SilentnovelL762L0.23
GBMchr1229638032Missense_MutationnovelS1140C0.04
GBMchr1229637008Missense_MutationnovelP799S0.39
GBMchr1229636923SilentnovelL770L0.09
GBMchr1229637007SilentnovelS798S0.11
GBMchr1229636397In_Frame_InsnovelP595_E596insK0.38
GBMchr1229636266Missense_MutationNAF551L0.2
GBMchr1229635890Missense_MutationnovelD426A0.48
GBMchr1229635501Frame_Shift_InsnovelT297Sfs*170.14
GBMchr1229636702Frame_Shift_DelnovelI697Sfs*40.05
GBMchr1229637422Missense_MutationnovelL937M0.43
HNSCchr1229635219SilentnovelL202L0.13
HNSCchr1229654362Missense_MutationnovelA1451T0.06Urb2
HNSCchr1229647576Missense_MutationnovelV1325F0.23Urb2
HNSCchr1229637649SilentnovelL1012L0.34
HNSCchr1229636686Silentrs781516976F691F0.74
HNSCchr1229635089Frame_Shift_DelnovelR159Sfs*80.19
HNSCchr1229635391Missense_MutationnovelD260Y0.06
HNSCchr1229635973Missense_Mutationrs115399585R454C0.31
HNSCchr1229637129Missense_MutationnovelP839L0.05
HNSCchr1229659214Missense_MutationnovelR1498G0.23Urb2
HNSCchr1229659148Missense_MutationnovelL1476F0.32Urb2
HNSCchr1229637295Silentrs749447215I894I0.39
KIRCchr1229638143Missense_MutationNAA1177V0.23
KIRCchr1229636981Frame_Shift_InsnovelK790Rfs*140.09
KIRCchr1229635138Frame_Shift_DelnovelA176Pfs*70.16
KIRCchr1229638050Missense_Mutationrs141779194T1146M0.27
KIRPchr1229636074SilentNAQ487Q0.47
KIRPchr1229636109Missense_MutationNAS499F0.34
LAMLchr1229635131Missense_MutationnovelI173T0.18
LGGchr1229637203Missense_Mutationrs768077441I864V0.34
LGGchr1229637667Missense_MutationnovelS1018R0.29
LGGchr1229643585SilentnovelA1229A0.12
LGGchr1229635071Missense_MutationnovelL153H0.16
LGGchr1229638145Missense_MutationnovelA1178T0.24
LGGchr1229637636Frame_Shift_DelnovelL1008Qfs*80.07
LIHCchr1229643612SilentNAG1238G0.5
LIHCchr1229637335Missense_MutationNAS908C0.93
LIHCchr1229659123Missense_MutationNAK1467N0.07Urb2
LIHCchr1229635120Missense_MutationNAL169F0.34
LUADchr1229636618Missense_MutationnovelL669I0.13
LUADchr1229643563Missense_Mutationrs753287753D1222V0.05
LUADchr1229638044Missense_MutationNAD1144V0.2
LUADchr1229638046Missense_MutationNAR1145W0.19
LUADchr1229643637Missense_MutationNAM1247L0.32
LUADchr12296594133'UTRnovel0.53
LUADchr1229636030Frame_Shift_Insrs763473884L474Ffs*100.14
LUADchr1229636266Missense_MutationNAF551L0.18
LUADchr1229643530Splice_Regionnovel0.17
LUADchr1229636638SilentNAE675E0.21
LUADchr1229637649SilentNAL1012L0.15
LUADchr1229634919Splice_RegionnovelI102I0.18
LUADchr1229645859Missense_MutationNAA1266S0.42
LUADchr1229637113Missense_MutationNAV834L0.25
LUADchr1229638111SilentNAP1166P0.33
LUADchr1229654348Missense_MutationNAS1446F0.37Urb2
LUADchr1229636223Missense_MutationnovelL537Q0.18
LUADchr1229637826SilentnovelL1071L0.25
LUADchr1229659127Missense_MutationnovelL1469V0.05Urb2
LUADchr1229636089SilentNAS492S0.08
LUADchr1229647701SilentnovelV1366V0.2
LUADchr1229651298Missense_Mutationrs746722891R1405W0.12Urb2
LUADchr1229636796Missense_MutationnovelG728V0.13
LUADchr1229643531Splice_SiteNAX1212_splice0.18
LUADchr1229659191Missense_MutationnovelR1490L0.38Urb2
LUADchr1229637336Missense_MutationNAS908I0.09
LUADchr1229636085Missense_MutationnovelA491V0.1
LUADchr1229636885Missense_MutationnovelD758H0.19
LUADchr1229635928Missense_Mutationrs764093845E439K0.28
LUSCchr1229635124Nonsense_MutationNAE171*0.4
LUSCchr1229637030Missense_MutationnovelS806F0.36
LUSCchr1229637031Silentrs758933137S806S0.35
LUSCchr1229635858Silentrs374430308L415L0.08
LUSCchr1229637468Nonsense_MutationnovelL952*0.79
LUSCchr1229638199Missense_MutationNAD1196H0.2
LUSCchr1229638117Silentrs114023508L1168L0.19
LUSCchr1229634940SilentNAE109E0.06
LUSCchr1229636984Missense_MutationnovelI791V0.33
LUSCchr1229635541Missense_Mutationrs747838556L310F0.17
LUSCchr1229636467SilentNAA618A0.47
LUSCchr1229635159Missense_MutationNAL182F0.28
LUSCchr1229635859Missense_MutationnovelI416L0.25
LUSCchr1229636728SilentnovelA705A0.33
LUSCchr1229654363Frame_Shift_DelnovelQ1452Sfs*90.12Urb2
LUSCchr1229637887Missense_MutationnovelV1092L0.4
LUSCchr1229635146Missense_MutationNAG178D0.26
LUSCchr1229647730Nonsense_MutationNAS1376*0.04Urb2
LUSCchr1229659294SilentNAA1524A0.39
LUSCchr1229635431Missense_MutationNAN273I0.4
OVchr1229637476Missense_MutationNAG955R0.11
OVchr1229636437SilentnovelL608L0.08
OVchr1229636776SilentnovelA721A0.09
OVchr1229636810Missense_MutationNAL733F0.18
OVchr1229636434In_Frame_InsnovelL607_L608insASGPSTV0.19
OVchr1229635633SilentnovelL340L0.12
OVchr1229635569Missense_MutationnovelG319V0.08
OVchr1229635430Missense_MutationnovelN273H0.08
OVchr1229636872Frame_Shift_InsnovelL754Gfs*230.14
OVchr1229654345Missense_MutationnovelF1445C0.07Urb2
OVchr1229636437SilentnovelL608L0.1
OVchr1229636179SilentnovelQ522Q0.09
OVchr1229636645Missense_MutationnovelY678D0.09
OVchr1229636647Nonsense_MutationnovelY678*0.06
OVchr1229635151Nonsense_MutationnovelY180Sfs*20.07
OVchr1229638163SilentnovelL1184L0.13
OVchr1229636089Frame_Shift_DelnovelG493Afs*320.2
OVchr1229637146Missense_MutationnovelD845Y0.05
OVchr1229638142Missense_MutationnovelA1177S0.07
OVchr1229636666Missense_MutationnovelT685S0.06
OVchr1229636156Missense_MutationnovelS515A0.13
PAADchr1229659275Missense_MutationnovelG1518E0.26
PRADchr1229637571SilentnovelL986L0.1
PRADchr1229636109Missense_MutationNAS499F0.26
PRADchr1229635454Missense_Mutationrs116505905V281M0.31
PRADchr1229636016Missense_Mutationrs747719182R468Q0.06
READchr1229632274SilentNAL44L0.31
READchr1229637639Missense_MutationNAM1009T0.2
READchr1229635185Missense_MutationNAR191I0.46
READchr1229635745Missense_Mutationrs765588103D378N0.52
READchr1229635987Missense_MutationNAQ458H0.41
READchr1229643590Missense_MutationnovelF1231S0.38
READchr1229635760Missense_Mutationrs763894401E383K0.68
READchr1229638051Silentrs531090167T1146T0.12
SARCchr1229638064Missense_MutationnovelV1151F0.13
SARCchr1229643656Missense_MutationnovelG1253A0.15
SARCchr1229651264Missense_MutationnovelL1393F0.08Urb2
SARCchr1229636090Missense_MutationnovelG493S0.26
SKCMchr1229636550Missense_Mutationrs535197034S646L0.22
SKCMchr1229659138Missense_MutationNAE1472D0.35Urb2
SKCMchr1229659186SilentNAF1488F0.41
SKCMchr1229651252SilentNAI1389I0.46
SKCMchr1229638069SilentNAA1152A0.97
SKCMchr1229638190Missense_MutationnovelP1193S0.47
SKCMchr1229635738Silentrs747159360I375I0.35
SKCMchr1229636909SilentNAL766L0.29
SKCMchr1229643678Nonsense_MutationNAW1260*0.2
SKCMchr1229635958Nonsense_MutationNAQ449*0.43
SKCMchr1229637265SilentnovelI884I0.41
SKCMchr1229637105Missense_Mutationrs753402625S831L0.37
SKCMchr1229637884Missense_MutationNAV1091L0.18
SKCMchr1229638191Missense_MutationNAP1193L0.07
SKCMchr1229636435SilentnovelL608L0.17
SKCMchr1229636436Missense_MutationnovelL608P0.17
SKCMchr1229637658Missense_Mutationrs759247481M1015I0.27
SKCMchr1229637259Silentrs559764814F882F0.16
SKCMchr1229635729SilentNAI372I0.13
SKCMchr1229637629Missense_MutationNAE1006K0.3
SKCMchr1229635825Silentrs771513516P404P0.33
SKCMchr1229638033SilentnovelS1140S0.45
SKCMchr1229635177SilentnovelV188V0.16
SKCMchr1229636372Missense_MutationNAL587F0.53
SKCMchr1229659168Silentrs775325361I1482I0.6
SKCMchr1229636350Silentrs754675516L579L0.34
SKCMchr1229637619Silentrs768908969G1002G0.45
SKCMchr1229659186SilentNAF1488F0.54
SKCMchr1229634947Missense_MutationNAL112F0.28
SKCMchr1229637684Missense_MutationnovelR1024K0.14
SKCMchr1229637990Missense_MutationnovelA1126V0.3
STADchr1229636979Frame_Shift_DelnovelI791Yfs*220.34
STADchr1229636465Missense_Mutationrs764447714A618T0.22
STADchr1229636720Missense_Mutationrs574261258D703N0.13
STADchr1229638047Missense_MutationNAR1145K0.14
STADchr1229637250SilentNAK879K0.11
STADchr1229636652Missense_MutationNAQ680P0.27
STADchr1229645942Silentrs145362478A1293A0.44
STADchr1229651309SilentNAR1408R0.14
STADchr1229643579Frame_Shift_DelnovelG1228Efs*80.19
STADchr1229635613Missense_MutationNAC334R0.13
STADchr1229637525Missense_MutationNAF971C0.17
STADchr1229636511Missense_MutationnovelP633L0.16
STADchr1229636695SilentNAE694E0.12
STADchr1229635416Missense_Mutationrs114879838T268M0.46
STADchr1229635655Missense_MutationNAL348M0.25
STADchr1229645938Missense_Mutationrs747572919R1292H0.25
STADchr1229635081Silentrs779255675S156S0.27
STADchr1229635955Missense_MutationNAA448T0.27
THYMchr1229635372SilentnovelS253S0.15
UCECchr1229659177Silentrs776626236D1485D0.43
UCECchr1229635097Missense_Mutationrs780581627E162K0.31
UCECchr1229636590Missense_MutationNAI659M0.37
UCECchr1229634963Missense_MutationNAR117I0.18
UCECchr1229637006Missense_MutationnovelS798I0.18
UCECchr1229635185Missense_MutationNAR191I0.33
UCECchr1229659284Missense_MutationNAR1521I0.45
UCECchr1229632345Missense_MutationnovelE68G0.24
UCECchr1229637988SilentnovelE1125E0.22
UCECchr1229635621Missense_MutationNAK336N0.59
UCECchr1229635749Missense_MutationnovelR379K0.29
UCECchr1229636849Missense_MutationnovelN746D0.42
UCECchr1229637552Missense_MutationnovelR980I0.32
UCECchr1229659115Missense_MutationnovelA1465S0.38Urb2
UCECchr1229632415Missense_MutationnovelK91N0.04
UCECchr1229659215Missense_MutationNAR1498I0.21Urb2
UCECchr1229636844Missense_MutationNAV744A0.19
UCECchr1229637754Frame_Shift_InsnovelQ1048Nfs*400.07
UCECchr1229637756In_Frame_InsnovelQ1048delinsHM0.05
UCECchr1229638025Missense_Mutationrs747826493D1138N0.27
UCECchr1229637133Nonsense_MutationnovelW840*0.19
UCECchr1229637765Missense_MutationnovelQ1051R0.18
UCECchr12296593683'UTRnovel0.19
UCECchr1229637555Missense_MutationnovelA981V0.15
UCECchr1229637134Missense_MutationnovelL841F0.34
UCECchr1229647520Missense_Mutationrs142409402R1306Q0.1
UCECchr1229659255Nonsense_MutationNAY1511*0.42Urb2
UCECchr1229638003SilentNAQ1130Q0.31
UCECchr1229636748Missense_MutationnovelR712I0.19
UCECchr1229637150Missense_Mutationrs768764374H846R0.38
UCECchr1229635327SilentnovelE238E0.32
UCECchr1229637301SilentnovelG896G0.52
UCECchr1229637513Missense_MutationnovelG967D0.27
UCECchr1229654317Missense_Mutationrs147338452A1436T0.41Urb2
UCECchr1229635346Missense_MutationNAI245V0.11
UCECchr1229635454Missense_Mutationrs116505905V281M0.25
UCECchr1229635785Missense_Mutationrs747162812R391H0.44
UCECchr1229637483Missense_MutationnovelS957I0.41
UCECchr1229635974Missense_Mutationrs781217311R454H0.4
UCECchr1229636751Missense_MutationnovelK713T0.35
UCECchr1229637754Frame_Shift_InsnovelQ1048Nfs*400.06
UCECchr1229637756In_Frame_InsnovelQ1048delinsHM0.03
UCECchr1229638083Missense_MutationNAV1157A0.36
UCECchr1229636049Missense_Mutationrs752766281R479H0.42
UCECchr12296593183'UTRrs7765341610.41
UCECchr1229634963Missense_MutationNAR117I0.24
UCECchr1229635593Missense_MutationnovelV327A0.28
UCECchr1229635795SilentnovelA394A0.34
UCECchr1229636103Missense_MutationnovelV497A0.18
UCECchr1229637434Missense_MutationnovelF941L0.35
UCECchr1229659191Missense_Mutationrs138399002R1490Q0.58Urb2
UCECchr1229637197Missense_Mutationrs759945900E862K0.28
UCECchr1229636415Missense_MutationnovelK601T0.47
UCECchr1229635911Missense_Mutationrs567382344S433L0.42
UCECchr1229636664Missense_MutationnovelR684M0.1
UCECchr1229647754Splice_SitenovelX1383_splice0.17
UCECchr1229654320Missense_Mutationrs765047341A1437T0.16Urb2
UCECchr1229636773Silentrs374249981T720T0.41
UCECchr1229659279SilentnovelE1519E0.29
UCECchr1229659168Silentrs775325361I1482I0.2
UCECchr1229647719SilentnovelN1372N0.58
UCECchr1229635754Missense_Mutationrs763537395R381W0.29
UCECchr1229654371Missense_Mutationrs369349530V1454M0.38Urb2
UCECchr1229635540Missense_MutationnovelK309N0.3
UCECchr1229636808Missense_MutationnovelG732V0.2
UCECchr1229637291Missense_MutationnovelS893N0.18
UCECchr1229632335Missense_MutationNAD65N0.27
UCECchr1229636566Frame_Shift_DelnovelT653Hfs*70.05
UCECchr1229647629Silentrs748000802H1342H0.37
UCECchr1229638008Missense_MutationnovelC1132Y0.32
UCECchr1229637768Missense_MutationNAG1052D0.18
UCECchr1229647599Frame_Shift_DelNAE1334Rfs*250.41Urb2
UCECchr1229636446Nonsense_MutationNAY611*0.4
UCECchr1229637928Silentrs762912459P1105P0.63
UCECchr1229637109SilentNAG832G0.13
UCECchr1229636032SilentnovelV473V0.2
UCECchr1229636858Missense_MutationnovelI749L0.17
UCECchr1229637158Missense_MutationnovelV849M0.21
UCECchr1229638080Missense_MutationnovelG1156D0.18
UCECchr1229645933SilentnovelL1290L0.16
UCECchr1229651269Missense_MutationnovelS1395Y0.44Urb2
UCECchr1229659290Missense_Mutationrs139372652T1523M0.53
UCECchr12296594613'UTRnovel0.17
UCECchr1229635964Missense_MutationNAA451T0.19
UCECchr1229636655Missense_MutationNAK681T0.2
UCECchr1229635745Missense_Mutationrs765588103D378N0.29
UCECchr1229634961Missense_MutationnovelQ116H0.21
UCECchr1229635919Missense_MutationnovelI436V0.28
UCECchr1229643544Missense_MutationnovelP1216S0.26
UCECchr1229636833Nonsense_MutationnovelW740*0.43
UCECchr1229637519Missense_Mutationrs759298857D969G0.33
UCSchr1229635454Missense_Mutationrs116505905V281M0.44
UCSchr1229627744Frame_Shift_InsnovelP38Afs*30.17
UCSchr1229637749Missense_MutationnovelE1046K0.37

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCADEL0.08090.033566
DLBCDEL0.1250.0017831
KIRCDEL0.06630.018371
LGGDEL0.03120.11599
LIHCAMP0.65954.3428e-09
PCPGDEL0.09880.12617
PRADDEL0.07520.00015401
READAMP0.25450.14328
SARCDEL0.29572.6086e-08
TGCTDEL0.02670.16985
THYMAMP0.1870.24554
UCECAMP0.36922.3921e-06

Survival Analysis
CancerP-value Q-value
MESO0.0015

Kaplan-Meier Survival Analysis

ACC0.0057

Kaplan-Meier Survival Analysis

SKCM0.00014

Kaplan-Meier Survival Analysis

KIRP0.0032

Kaplan-Meier Survival Analysis

CESC0.0037

Kaplan-Meier Survival Analysis

LAML0.044

Kaplan-Meier Survival Analysis

KICH0.032

Kaplan-Meier Survival Analysis

UCEC0.049

Kaplan-Meier Survival Analysis

GBM0.042

Kaplan-Meier Survival Analysis

LIHC0.0077

Kaplan-Meier Survival Analysis

LGG0.004

Kaplan-Meier Survival Analysis

LUAD0.024

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000135763 (Gene tree)
Gene ID
9816
Gene Symbol
URB2
Alias
NPA2|NET10|KIAA0133
Full Name
URB2 ribosome biogenesis homolog
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
34,683 bases
Position
chr1:229,626,205-229,660,887
Accession
28967
RBP type
canonical RBP
Summary
(URB2 Ribosome Biogenesis Homolog) is a Protein Coding gene. Diseases associated with URB2 include Hepatocellular Carcinoma and Buruli Ulcer.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000258243Urb2PF10441.91.7e-2311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNANascentRICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000434387URB2-202643-ENSP0000039510784 (aa)-Q5VYD0
ENST00000258243URB2-2015613XM_005273360ENSP000002582431524 (aa)XP_005273417Q14146
Gene Model
Click here to download ENSG00000135763's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000135763Attention Deficit Disorder with Hyperactivity1.8740000E-00418937294
ENSG00000135763Attention Deficit Disorder with Hyperactivity1.7980000E-00418937294
ENSG00000135763Cytarabine4E-724483146
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000135763rs107995441229648978?Red blood cell count30595370EFO_0004305
ENSG00000135763rs594288521229634617?Mean corpuscular hemoglobin30595370EFO_0004527
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000135763's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000135763URB29961.628ENSAPOG00000000608urb29435.161Acanthochromis_polyacanthus
ENSG00000135763URB29989.157ENSAMEG00000009206URB29983.125Ailuropoda_melanoleuca
ENSG00000135763URB29961.446ENSACIG00000008078-9958.261Amphilophus_citrinellus
ENSG00000135763URB29961.905ENSAOCG00000019961urb29935.312Amphiprion_ocellaris
ENSG00000135763URB29961.905ENSAPEG00000005263urb29935.312Amphiprion_percula
ENSG00000135763URB29963.095ENSATEG00000020930urb29934.444Anabas_testudineus
ENSG00000135763URB29972.619ENSAPLG00000002998URB210051.000Anas_platyrhynchos
ENSG00000135763URB29969.048ENSACAG00000001285URB210048.683Anolis_carolinensis
ENSG00000135763URB210094.048ENSANAG00000033963URB210092.782Aotus_nancymaae
ENSG00000135763URB29960.714ENSACLG00000009254urb29535.101Astatotilapia_calliptera
ENSG00000135763URB210057.647ENSAMXG00000003474urb210036.486Astyanax_mexicanus
ENSG00000135763URB29881.707ENSBTAG00000010180URB29973.539Bos_taurus
ENSG00000135763URB210095.238ENSCJAG00000010968URB210092.388Callithrix_jacchus
ENSG00000135763URB29984.337ENSCAFG00000012118URB210082.152Canis_familiaris
ENSG00000135763URB210083.333ENSCAFG00020027217URB29981.250Canis_lupus_dingo
ENSG00000135763URB29979.518ENSCHIG00000014513URB29973.276Capra_hircus
ENSG00000135763URB210090.476ENSTSYG00000006924URB29983.388Carlito_syrichta
ENSG00000135763URB29985.542ENSCPOG00000020777-10081.322Cavia_porcellus
ENSG00000135763URB210094.048ENSCCAG00000023932URB210092.979Cebus_capucinus
ENSG00000135763URB210096.429ENSCATG00000043366URB210094.751Cercocebus_atys
ENSG00000135763URB29987.952ENSCLAG00000006268URB210077.493Chinchilla_lanigera
ENSG00000135763URB210096.429ENSCSAG00000010599URB210094.488Chlorocebus_sabaeus
ENSG00000135763URB29986.747ENSCHOG00000010163URB27181.497Choloepus_hoffmanni
ENSG00000135763URB29977.381ENSCPBG00000006191URB210055.527Chrysemys_picta_bellii
ENSG00000135763URB210096.429ENSCANG00000023711URB210094.685Colobus_angolensis_palliatus
ENSG00000135763URB210082.143ENSCGRG00001009591Urb210073.722Cricetulus_griseus_chok1gshd
ENSG00000135763URB210082.143ENSCGRG00000011259Urb210073.722Cricetulus_griseus_crigri
ENSG00000135763URB29955.814ENSCSEG00000000299urb29932.914Cynoglossus_semilaevis
ENSG00000135763URB29659.756ENSCVAG00000011011urb29934.211Cyprinodon_variegatus
ENSG00000135763URB210060.920ENSDARG00000003217urb29961.165Danio_rerio
ENSG00000135763URB29974.699ENSDNOG00000043064URB29960.661Dasypus_novemcinctus
ENSG00000135763URB29980.723ENSDORG00000014975Urb210075.934Dipodomys_ordii
ENSG00000135763URB29575.841ENSETEG00000002869URB29575.841Echinops_telfairi
ENSG00000135763URB210085.714ENSEASG00005012060URB29981.747Equus_asinus_asinus
ENSG00000135763URB210085.714ENSECAG00000012338URB29987.234Equus_caballus
ENSG00000135763URB28986.667ENSEEUG00000002669URB29280.851Erinaceus_europaeus
ENSG00000135763URB210067.816ENSELUG00000014647urb29940.013Esox_lucius
ENSG00000135763URB29986.747ENSFCAG00000007662URB210080.184Felis_catus
ENSG00000135763URB210069.412ENSFALG00000003385URB210050.129Ficedula_albicollis
ENSG00000135763URB29989.157ENSFDAG00000021079URB210076.640Fukomys_damarensis
ENSG00000135763URB29662.195ENSFHEG00000010357urb29933.960Fundulus_heteroclitus
ENSG00000135763URB29954.762ENSGMOG00000012459urb210036.184Gadus_morhua
ENSG00000135763URB29971.429ENSGALG00000011101URB210051.544Gallus_gallus
ENSG00000135763URB29963.095ENSGACG00000016179urb29938.160Gasterosteus_aculeatus
ENSG00000135763URB29975.000ENSGAGG00000021879URB210055.491Gopherus_agassizii
ENSG00000135763URB2100100.000ENSGGOG00000025643URB210098.228Gorilla_gorilla
ENSG00000135763URB29960.714ENSHBUG00000018469urb29935.419Haplochromis_burtoni
ENSG00000135763URB29987.952ENSHGLG00000016561URB29977.748Heterocephalus_glaber_female
ENSG00000135763URB29987.952ENSHGLG00100001838URB210075.853Heterocephalus_glaber_male
ENSG00000135763URB29959.302ENSHCOG00000013583-9955.340Hippocampus_comes
ENSG00000135763URB210060.920ENSIPUG00000020315urb29936.410Ictalurus_punctatus
ENSG00000135763URB29983.133ENSSTOG00000025323URB210076.115Ictidomys_tridecemlineatus
ENSG00000135763URB29984.337ENSJJAG00000011998Urb210074.525Jaculus_jaculus
ENSG00000135763URB29658.333ENSKMAG00000020129urb29933.333Kryptolebias_marmoratus
ENSG00000135763URB29960.714ENSLBEG00000003249-9953.881Labrus_bergylta
ENSG00000135763URB29963.953ENSLACG00000002038URB210046.164Latimeria_chalumnae
ENSG00000135763URB210058.621ENSLOCG00000015462urb210041.844Lepisosteus_oculatus
ENSG00000135763URB29987.952ENSLAFG00000012484URB210078.135Loxodonta_africana
ENSG00000135763URB29996.386ENSMFAG00000039905URB210094.226Macaca_fascicularis
ENSG00000135763URB29996.386ENSMMUG00000009509URB210094.357Macaca_mulatta
ENSG00000135763URB29996.386ENSMNEG00000038762URB210094.029Macaca_nemestrina
ENSG00000135763URB210096.429ENSMLEG00000043252URB210094.685Mandrillus_leucophaeus
ENSG00000135763URB29862.651ENSMAMG00000020365urb29934.642Mastacembelus_armatus
ENSG00000135763URB29959.524ENSMZEG00005011027urb29935.246Maylandia_zebra
ENSG00000135763URB29971.429ENSMGAG00000012073URB210048.832Meleagris_gallopavo
ENSG00000135763URB210080.952ENSMAUG00000017980Urb210083.688Mesocricetus_auratus
ENSG00000135763URB210090.476ENSMICG00000033302URB29984.964Microcebus_murinus
ENSG00000135763URB210083.333ENSMOCG00000020369Urb210072.692Microtus_ochrogaster
ENSG00000135763URB29962.791ENSMMOG00000001301-9959.223Mola_mola
ENSG00000135763URB210076.190ENSMODG00000009076-9781.651Monodelphis_domestica
ENSG00000135763URB29961.628ENSMALG00000006529urb29935.702Monopterus_albus
ENSG00000135763URB210079.762ENSMUSG00000031976Urb210071.531Mus_musculus
ENSG00000135763URB210089.286ENSMPUG00000012438URB210080.774Mustela_putorius_furo
ENSG00000135763URB210083.333ENSMLUG00000006236-9986.239Myotis_lucifugus
ENSG00000135763URB210080.952ENSNGAG00000016524Urb210072.823Nannospalax_galili
ENSG00000135763URB210097.619ENSNLEG00000014450URB210096.785Nomascus_leucogenys
ENSG00000135763URB29163.706ENSMEUG00000016434URB29463.706Notamacropus_eugenii
ENSG00000135763URB210083.333ENSOPRG00000009906URB29276.481Ochotona_princeps
ENSG00000135763URB29987.952ENSODEG00000005593URB210076.247Octodon_degus
ENSG00000135763URB29960.714ENSONIG00000017078urb29938.014Oreochromis_niloticus
ENSG00000135763URB29975.000ENSOANG00000013732URB210050.359Ornithorhynchus_anatinus
ENSG00000135763URB210089.286ENSOCUG00000010700URB29981.353Oryctolagus_cuniculus
ENSG00000135763URB210056.322ENSORLG00000010915urb29934.445Oryzias_latipes
ENSG00000135763URB210056.322ENSORLG00020003361urb29934.608Oryzias_latipes_hni
ENSG00000135763URB210056.322ENSORLG00015001534urb29934.685Oryzias_latipes_hsok
ENSG00000135763URB29959.302ENSOMEG00000010076urb29934.409Oryzias_melastigma
ENSG00000135763URB210089.286ENSOGAG00000003021URB29980.446Otolemur_garnettii
ENSG00000135763URB29980.723ENSOARG00000003102URB29973.211Ovis_aries
ENSG00000135763URB2100100.000ENSPPAG00000040629URB210098.753Pan_paniscus
ENSG00000135763URB29986.747ENSPPRG00000012767URB210079.803Panthera_pardus
ENSG00000135763URB29986.747ENSPTIG00000012577URB210089.394Panthera_tigris_altaica
ENSG00000135763URB2100100.000ENSPTRG00000002092URB210098.688Pan_troglodytes
ENSG00000135763URB210096.429ENSPANG00000002245URB210092.126Papio_anubis
ENSG00000135763URB210066.667ENSPKIG00000005787urb210039.859Paramormyrops_kingsleyae
ENSG00000135763URB29973.810ENSPSIG00000002690URB210054.756Pelodiscus_sinensis
ENSG00000135763URB29959.524ENSPMGG00000002006-9953.153Periophthalmus_magnuspinnatus
ENSG00000135763URB28984.000ENSPEMG00000019551Urb210073.598Peromyscus_maniculatus_bairdii
ENSG00000135763URB210078.571ENSPCIG00000030071URB210063.874Phascolarctos_cinereus
ENSG00000135763URB29658.537ENSPFOG00000014330urb29934.459Poecilia_formosa
ENSG00000135763URB29658.537ENSPLAG00000014654urb29933.869Poecilia_latipinna
ENSG00000135763URB29657.317ENSPMEG00000012356urb29933.890Poecilia_mexicana
ENSG00000135763URB29658.333ENSPREG00000010268urb29933.828Poecilia_reticulata
ENSG00000135763URB210096.429ENSPPYG00000000123URB29996.783Pongo_abelii
ENSG00000135763URB210089.286ENSPCOG00000023537URB29986.211Propithecus_coquereli
ENSG00000135763URB210065.334ENSPVAG00000002108URB210065.334Pteropus_vampyrus
ENSG00000135763URB29960.714ENSPNYG00000016840urb29535.101Pundamilia_nyererei
ENSG00000135763URB210060.000ENSPNAG00000013684urb210036.930Pygocentrus_nattereri
ENSG00000135763URB210082.143ENSRNOG00000026853Urb29772.858Rattus_norvegicus
ENSG00000135763URB210097.619ENSRBIG00000037937URB210094.357Rhinopithecus_bieti
ENSG00000135763URB210097.619ENSRROG00000039854URB210094.094Rhinopithecus_roxellana
ENSG00000135763URB210091.929ENSSBOG00000023055URB210091.929Saimiri_boliviensis_boliviensis
ENSG00000135763URB210077.381ENSSHAG00000014735URB210064.594Sarcophilus_harrisii
ENSG00000135763URB29963.953ENSSFOG00015015432urb29839.723Scleropages_formosus
ENSG00000135763URB29961.628ENSSMAG00000004984urb29534.089Scophthalmus_maximus
ENSG00000135763URB29961.628ENSSDUG00000000902urb29934.593Seriola_dumerili
ENSG00000135763URB29976.190ENSSPUG00000018549URB210053.610Sphenodon_punctatus
ENSG00000135763URB29963.095ENSSPAG00000013632urb29654.321Stegastes_partitus
ENSG00000135763URB29985.542ENSSSCG00000010186URB29975.246Sus_scrofa
ENSG00000135763URB210065.882ENSTGUG00000009990URB210049.935Taeniopygia_guttata
ENSG00000135763URB29961.905ENSTRUG00000008173urb29934.618Takifugu_rubripes
ENSG00000135763URB29960.714ENSTNIG00000017689urb29936.446Tetraodon_nigroviridis
ENSG00000135763URB29983.133ENSTTRG00000014864URB29967.367Tursiops_truncatus
ENSG00000135763URB29989.157ENSUAMG00000015022URB29982.863Ursus_americanus
ENSG00000135763URB29989.157ENSUMAG00000004728URB29982.928Ursus_maritimus
ENSG00000135763URB29687.654ENSVPAG00000001750-6387.143Vicugna_pacos
ENSG00000135763URB29984.337ENSVVUG00000006747URB210082.021Vulpes_vulpes
ENSG00000135763URB29965.517ENSXETG00000023331urb210042.071Xenopus_tropicalis
ENSG00000135763URB29658.333ENSXCOG00000012170-9856.863Xiphophorus_couchianus
ENSG00000135763URB29658.333ENSXMAG00000015059urb29933.824Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus-IDAComponent
GO:0016235aggresome-IDAComponent
GO:0030496midbody19799413.IDAComponent
GO:0042254ribosome biogenesis21873635.IBAProcess
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