EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
18519039The p53 target protein Wig-1 binds hnRNP A2/B1 and RNA Helicase A via RNA.FEBS Lett2008 Jun 25Prahl Mdoi: 10.1016/j.febslet.2008.04.065
26885691The RNA helicase A in malignant transformation.Oncotarget2016 May 10Fidaleo Mdoi: 10.18632/oncotarget.7377.
14769796RNA helicase A in the MEF1 transcription factor complex up-regulates the MDR1 gene in multidrug-resistant cancer cells.J Biol Chem2004 Apr 23Zhong X-
19197335Genetic sequence variations of BRCA1-interacting genes AURKA, BAP1, BARD1 and DHX9 in French Canadian families with high risk of breast cancer.J Hum Genet2009 MarGu??nard Fdoi: 10.1038/jhg.2009.6
20802156RNA helicase A is a DNA-binding partner for EGFR-mediated transcriptional activation in the nucleus.Proc Natl Acad Sci U S A2010 Sep 14Huo Ldoi: 10.1073/pnas.1000743107
27034008The biology of DHX9 and its potential as a therapeutic target.Oncotarget2016 Jul 5Lee Tdoi: 10.18632/oncotarget.8446.

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1182854069Missense_MutationnovelH173Y0.2
BLCAchr1182880594Frame_Shift_DelnovelC872Vfs*450.37dsrm
BLCAchr1182843394Missense_MutationnovelR71Q0.15
BLCAchr1182858578Missense_MutationnovelQ280E0.19
BLCAchr1182881279Missense_MutationnovelI880M0.15dsrm
BLCAchr1182853404Missense_MutationnovelQ155E0.16
BLCAchr1182887134SilentnovelS1171S0.36
BLCAchr1182884754Missense_MutationnovelM1134I0.44
BLCAchr1182872490Nonsense_MutationNAQ571*0.06
BLCAchr1182858737Missense_MutationnovelE302G0.08
BLCAchr1182876108Missense_MutationnovelS625C0.38
BLCAchr1182858578Missense_MutationnovelQ280E0.16
BLCAchr1182854156Missense_MutationnovelQ202E0.49
BLCAchr1182853366Missense_MutationNAG142E0.23
BLCAchr1182881422Missense_MutationnovelA928G0.2
BLCAchr1182880494Splice_Regionnovel0.17
BLCAchr1182876227Missense_MutationNAT665A0.24
BLCAchr1182883594Missense_MutationnovelK1073N0.23
BLCAchr1182876518Missense_MutationNAP701S0.44
BLCAchr1182881292Missense_MutationnovelA885P0.24dsrm
BRCAchr1182867017Missense_MutationNAD511Y0.24
BRCAchr1182884712SilentNAI1120I0.23
BRCAchr1182872361Missense_Mutationrs754675901R528C0.19
BRCAchr1182858580SilentnovelQ280Q0.06
BRCAchr1182858761Missense_MutationnovelL310R0.22
BRCAchr1182887372Missense_MutationnovelG1251S0.21
BRCAchr1182878024Missense_MutationNAQ734H0.15
BRCAchr1182884632Missense_MutationNAH1094Y0.18
BRCAchr1182881353Missense_MutationNAR905Q0.08
BRCAchr1182880572Missense_MutationNAR863H0.12dsrm
BRCAchr1182874945Missense_MutationnovelE602D0.12
BRCAchr1182876878Missense_MutationNAV725F0.34
BRCAchr1182843358Missense_MutationnovelS59N0.04
BRCAchr1182842633Missense_MutationNAI23V0.63
CESCchr1182858804Missense_MutationNAQ324H0.58
CESCchr1182858184Missense_MutationNAH252Y0.33
CESCchr1182866478Missense_MutationnovelR456Q0.31
CESCchr1182874877Missense_MutationNAQ580E0.11
CESCchr1182881539Missense_MutationNAE936K0.09
CESCchr1182876854Missense_MutationNAE717K0.38
CESCchr1182843334Missense_MutationNAS51Y0.48
CHOLchr1182876890Missense_MutationnovelI729V0.4
CHOLchr1182881334Missense_MutationNAR899W0.2
COADchr1182866478Missense_MutationnovelR456Q0.17
COADchr1182881334Missense_MutationNAR899W0.43
COADchr1182887424Missense_MutationnovelG1268D0.03
COADchr11828874513'UTRnovel0.1
COADchr1182858786SilentnovelF318F0.11
COADchr1182866531Nonsense_MutationnovelR474*0.17
COADchr1182876145Silentrs771546846I637I0.19
COADchr1182876081Missense_MutationnovelY616C0.25
COADchr1182883563Frame_Shift_DelnovelL1065Cfs*200.41
COADchr1182872380Missense_MutationNAY534C0.17
COADchr1182876118Silentrs191883464N628N0.39
COADchr1182884758Missense_MutationNAR1136C0.25
COADchr1182887209Silentrs781296469S1196S0.31
COADchr1182858799Nonsense_MutationnovelR323*0.4
COADchr1182878122Missense_MutationnovelR767Q0.18
COADchr1182887179SilentnovelG1186G0.08
COADchr1182887360Missense_MutationNAF1247V0.16
COADchr1182858642Splice_SitenovelX300_splice0.08
COADchr1182881579Missense_MutationNAT949I0.1
COADchr1182867005Missense_MutationnovelH507Y0.07
COADchr1182842585Missense_MutationNAF7V0.28
COADchr1182878065Missense_MutationnovelY748C0.38
COADchr1182876197Frame_Shift_InsnovelL657Ffs*440.34
COADchr1182853404Frame_Shift_InsnovelQ155Lfs*80.08
COADchr1182853405Missense_MutationnovelQ155L0.08
COADchr1182866478Missense_MutationnovelR456Q0.18
COADchr1182878128Missense_MutationNAR769Q0.28
COADchr1182887219Missense_MutationnovelG1200S0.06
ESCAchr1182883563Frame_Shift_DelnovelL1065Cfs*200.29
ESCAchr1182860032Missense_MutationnovelE394K0.29
ESCAchr1182887430Missense_MutationnovelY1270F0.6
ESCAchr1182881396SilentnovelL919L0.3
ESCAchr1182874953Missense_MutationnovelD605V0.72
GBMchr1182876089Nonsense_MutationnovelE619*0.17
GBMchr1182878164Missense_MutationNAR781H0.22
HNSCchr1182887154Missense_MutationnovelS1178C0.05
HNSCchr1182884777Missense_MutationnovelS1142L0.32
HNSCchr1182876461Missense_MutationnovelQ682E0.1
HNSCchr1182883320SilentnovelS1032S0.3
HNSCchr1182866537Missense_MutationnovelE476K0.27
HNSCchr1182843396Missense_MutationnovelI72V0.09
HNSCchr1182860092Frame_Shift_InsnovelG414Vfs*160.12
HNSCchr1182860093In_Frame_InsnovelG414_C415insSFKKLPSL0.1
HNSCchr1182887236SilentnovelS1205S0.19
HNSCchr1182858814Missense_MutationnovelG328S0.27
KIRCchr1182874910Frame_Shift_DelnovelK592Rfs*190.3
KIRCchr1182880505Missense_MutationNAA841T0.22dsrm
KIRCchr1182877927Intronnovel0.2
KIRCchr1182872362Missense_Mutationrs778625494R528H0.2
KIRCchr1182880549SilentnovelL855L0.19
KIRPchr1182853324Missense_MutationnovelG128E0.54
KIRPchr1182881572Missense_MutationNAM947V0.73
KIRPchr1182887291Missense_MutationNAG1224R0.43
KIRPchr1182859094Missense_MutationnovelE373K0.36
LGGchr1182858160Missense_MutationnovelL244M0.29
LGGchr1182884740Missense_Mutationrs370793590R1130C0.47
LIHCchr1182883631Missense_MutationNAD1086N0.28
LIHCchr1182843428Frame_Shift_DelnovelF83Lfs*30.43
LIHCchr1182879338Missense_MutationnovelG814S0.2
LIHCchr1182883247Missense_MutationNAE1008V0.54
LIHCchr1182842636Missense_MutationnovelR24G0.1
LIHCchr1182858809Missense_MutationnovelQ326R0.08
LIHCchr1182859097Nonsense_MutationnovelQ374*0.09
LIHCchr1182878130Missense_MutationNAP770A0.1
LIHCchr1182866998SilentNAG504G0.21
LIHCchr1182867027Missense_MutationnovelH514L0.14
LIHCchr1182854169Missense_MutationNAD206G0.05
LIHCchr1182883247Missense_MutationNAE1008V0.05
LIHCchr1182854169Missense_MutationNAD206G0.62
LIHCchr1182881287Missense_MutationnovelI883T0.09dsrm
LIHCchr1182854120Missense_MutationnovelQ190E0.15
LUADchr1182866507Missense_MutationNAG466R0.07
LUADchr1182854159Missense_MutationnovelV203L0.27
LUADchr1182860134Missense_MutationNAD428N0.09
LUADchr1182881350Missense_MutationNAH904L0.05
LUADchr1182858184Missense_MutationNAH252Y0.17
LUADchr1182881292Missense_MutationnovelA885S0.37dsrm
LUADchr1182876112Silentrs755270102Q626Q0.25
LUADchr1182876149Missense_MutationNAA639S0.26
LUADchr1182854112Frame_Shift_InsnovelY188Ifs*120.05
LUADchr1182854113In_Frame_InsnovelQ187_Y188insITF0.05
LUADchr1182866981Nonsense_MutationnovelE499*0.11
LUADchr1182881379Missense_MutationnovelD914H0.03
LUADchr1182853397Silentrs778356288K152K0.31
LUADchr1182858607Missense_MutationNAI289M0.12
LUADchr1182883170In_Frame_DelnovelG983_D989del0.18
LUADchr1182876071Missense_MutationnovelG613C0.32
LUADchr1182878169Missense_MutationNAE783Q0.34
LUADchr1182854033SilentNAL161L0.12
LUADchr1182878173Missense_MutationnovelR784K0.4
LUADchr1182887426Frame_Shift_InsnovelG1269Afs*530.12
LUADchr1182877998Intronnovel0.24
LUADchr1182878129Silentrs756240932R769R0.67
LUADchr1182887265Missense_MutationNAG1215V0.45
LUADchr1182874874Missense_MutationnovelI579V0.41
LUSCchr1182883625Missense_MutationnovelV1084I0.09
LUSCchr1182876903Missense_MutationNAK733R0.36
LUSCchr1182858180SilentnovelL250L0.35
LUSCchr1182883570SilentnovelL1065L0.16
LUSCchr1182859994Missense_MutationnovelI381N0.22
LUSCchr1182878030SilentNAV736V0.15
LUSCchr1182884779Missense_MutationnovelA1143T0.07
LUSCchr1182858614Missense_MutationnovelE292Q0.38
LUSCchr1182854145Missense_MutationNAY198C0.42
LUSCchr1182883347SilentnovelP1041P0.22
LUSCchr1182883563Frame_Shift_DelnovelL1065Cfs*200.26
LUSCchr1182858212Missense_MutationnovelG261V0.08
LUSCchr11828425635'UTRnovel0.14
OVchr1182853417Splice_SiteNAX159_splice0.47
OVchr1182860091SilentnovelT413T0.06
OVchr1182860093Missense_MutationnovelG414E0.07
OVchr1182883165Missense_MutationNAN981D0.19
OVchr1182876469SilentNAL684L0.17
OVchr1182843348Missense_MutationNAD56H0.52
PAADchr1182874877Nonsense_MutationnovelQ580*0.25
PAADchr1182876883SilentnovelV726V0.18
PAADchr1182878112Nonsense_MutationNAR764*0.17
PAADchr1182881411SilentnovelA924A0.08
PAADchr1182883276Missense_MutationnovelR1018C0.18
READchr1182859051SilentNAE358E0.15
READchr1182860155Missense_MutationNAA435S0.19
READchr1182883293SilentnovelH1023H0.12
READchr1182877856Intronnovel0.18
READchr1182872444Missense_MutationNAF555L0.46
READchr11828876583'UTRnovel0.43
READchr1182842585Missense_MutationNAF7V0.37
READchr1182876200Missense_MutationnovelF656V0.06
SKCMchr1182858833Missense_MutationNAP334H0.39
SKCMchr1182884757SilentNAI1135I0.35
SKCMchr1182876127SilentNAE631E0.55
SKCMchr1182883203SilentNAS993S0.24
SKCMchr1182876131Missense_MutationNAP633S0.34
SKCMchr1182858742Missense_MutationNAP304S0.4
SKCMchr1182876503Missense_MutationnovelR696C0.5
SKCMchr1182887287SilentNAS1222S0.33
SKCMchr1182883590Missense_MutationNAS1072F0.09
SKCMchr1182884757SilentNAI1135I0.3
SKCMchr1182866534Missense_MutationNAF475L0.28
SKCMchr1182854102Missense_MutationNAR184C0.23
SKCMchr1182876087Missense_MutationNAP618L0.2
SKCMchr1182880559Missense_MutationnovelP859S0.14dsrm
SKCMchr1182887235Missense_MutationNAS1205F0.39
SKCMchr1182876472SilentNAP685P0.3
SKCMchr1182866993Nonsense_MutationNAR503*0.38
SKCMchr1182878072Silentrs180944343T750T0.52
SKCMchr1182883345Missense_MutationNAP1041S0.62
SKCMchr1182852263Missense_MutationnovelP95S0.14
STADchr1182852264Missense_MutationNAP95H0.24
STADchr1182883563Frame_Shift_DelnovelL1065Cfs*200.1
STADchr1182880515Missense_MutationnovelA844V0.1dsrm
STADchr1182887425SilentNAG1268G0.37
STADchr1182874935Missense_Mutationrs757918330D599G0.44
STADchr1182879248Splice_SiteNAX784_splice0.36
STADchr1182883563Frame_Shift_DelnovelL1065Cfs*200.33
STADchr1182887224SilentNAG1201G0.07
STADchr1182859072Missense_MutationnovelK365N0.06
STADchr1182878104Missense_MutationNAR761Q0.15
STADchr1182860027Missense_MutationNAK392T0.15
STADchr1182887378Frame_Shift_InsnovelA1255Gfs*270.18
STADchr1182884796Frame_Shift_DelnovelM1149Dfs*250.3
STADchr1182858815Missense_MutationnovelG328D0.23
STADchr1182874917Missense_MutationnovelK593R0.38
STADchr1182884664SilentNAR1104R0.23
STADchr1182878163Missense_MutationnovelR781C0.25
STADchr1182887123Missense_MutationnovelD1168N0.21
STADchr1182866509Frame_Shift_DelnovelS468Afs*190.06
STADchr1182866980SilentNAL498L0.2
STADchr1182887379Frame_Shift_DelnovelA1255Pfs*630.36
UCECchr1182858139Missense_MutationNAL237M0.46
UCECchr1182881335Missense_Mutationrs1049265R899Q0.05
UCECchr1182887372Missense_MutationnovelG1251C0.23
UCECchr1182872391Missense_Mutationrs776849743R538C0.35
UCECchr1182876222Missense_MutationNAI663S0.37
UCECchr1182883523Nonsense_MutationNAR1050*0.18
UCECchr1182877832Intronnovel0.5
UCECchr1182881317Missense_MutationnovelF893S0.2dsrm
UCECchr1182887328Missense_MutationnovelG1236E0.46
UCECchr1182881342SilentnovelG901G0.06
UCECchr1182887122Silentrs555438540Y1167Y0.3
UCECchr1182884813Missense_MutationNAR1154Q0.33
UCECchr1182860173Missense_MutationNAV441I0.3
UCECchr1182881383Missense_MutationnovelH915R0.47
UCECchr1182883523Nonsense_MutationNAR1050*0.47
UCECchr1182881545Missense_MutationnovelR938C0.43
UCECchr1182872431Missense_MutationnovelF551C0.28
UCECchr1182876146Missense_MutationnovelE638K0.07
UCECchr11828874973'UTRrs1931469210.06
UCECchr1182887179Nonsense_MutationnovelG1193Sfs*40.04
UCECchr1182872372SilentNAV531V0.23
UCECchr1182881314Missense_MutationnovelP892L0.1dsrm
UCECchr1182874935Missense_Mutationrs757918330D599G0.07
UCECchr1182876197Frame_Shift_InsnovelL657Ffs*440.06
UCECchr1182842617Missense_MutationNAM17I0.04
UCECchr1182859099SilentNAQ374Q0.44
UCECchr1182887160Missense_MutationNAY1180C0.41
UCECchr1182876142Silentrs747582738L636L0.16
UCECchr1182852264Missense_MutationNAP95H0.45
UCECchr1182866508Missense_MutationnovelG466E0.4
UCECchr11828875533'UTRnovel0.43
UCECchr11828874723'UTRnovel0.08
UCECchr1182876197Missense_MutationnovelV655F0.13
UCECchr1182883524Missense_MutationnovelR1050Q0.37
UCECchr1182860112Silentrs550443659Q420Q0.14
UCECchr1182884740Missense_Mutationrs370793590R1130C0.38
UCECchr11828874733'UTRrs7537986730.26
UCECchr1182883563Frame_Shift_DelnovelL1065Cfs*200.46
UCECchr1182854152SilentnovelY200Y0.35
UCECchr1182881558Missense_MutationnovelH942R0.43
UCECchr1182843398Frame_Shift_DelnovelE74Kfs*30.52
UCECchr1182876874Silentrs768970996N723N0.52
UCECchr1182880546SilentnovelI854I0.36
UCECchr1182883301Missense_MutationnovelS1026Y0.51
UCECchr1182858107Frame_Shift_DelnovelF227Lfs*500.31
UCECchr1182867012Missense_MutationNAI509S0.43
UCECchr11828874613'UTRnovel0.39
UCECchr1182881385Missense_MutationnovelV916I0.51
UCECchr1182858620Missense_MutationnovelN294H0.4
UCECchr1182881358Missense_MutationnovelF907V0.38
UCECchr1182843393Nonsense_MutationNAR71*0.42
UCECchr1182876874Missense_MutationnovelN723K0.2
UCECchr1182872391Missense_Mutationrs776849743R538C0.36
UCECchr1182887227Silentrs766786769S1202S0.39
UCECchr11828876573'UTRnovel0.21
UCECchr1182881385Missense_MutationnovelV916I0.3
UCECchr1182883580Missense_MutationnovelL1069F0.49
UCECchr1182866531Nonsense_MutationnovelR474*0.42
UCECchr1182858786SilentnovelF318F0.1
UCECchr1182883523Nonsense_MutationNAR1050*0.19
UCECchr1182866574Missense_MutationnovelF488C0.27
UCECchr1182887379Frame_Shift_DelnovelA1255Pfs*630.21
UCECchr1182883563Frame_Shift_DelnovelL1065Cfs*200.19
UCECchr1182880529Missense_MutationnovelT849A0.45dsrm
UCECchr1182858556SilentNAE272E0.14
UCECchr1182866460Missense_MutationNAA450V0.2
UCECchr1182887082Splice_SitenovelX1154_splice0.39
UCECchr1182860112Missense_MutationnovelQ420H0.28
UCECchr1182867002Missense_MutationnovelS506G0.1
UCECchr1182843393Nonsense_MutationNAR71*0.42
UCECchr1182887367Missense_Mutationrs780048503R1249Q0.28
UCECchr1182854070Missense_MutationNAH173R0.16
UCECchr1182881334Missense_MutationNAR899W0.36
UCECchr1182883523Nonsense_MutationNAR1050*0.41
UCECchr1182887318Missense_MutationNAD1233Y0.27
UCECchr1182866461SilentNAA450A0.05
UCECchr1182858622Frame_Shift_DelnovelL295*0.07
UCECchr1182883523Nonsense_MutationNAR1050*0.32
UCECchr1182853362Nonsense_MutationNAR141*0.17
UCECchr1182883276Missense_MutationnovelR1018C0.16
UCECchr1182884740Missense_Mutationrs370793590R1130C0.14
UCECchr11828876633'UTRnovel0.37
UCECchr1182883563Frame_Shift_DelnovelL1065Cfs*200.25
UCECchr1182866458SilentNAS449S0.18
UCECchr1182876542Splice_SiteNAX708_splice0.17
UCECchr1182883608Missense_MutationnovelD1078A0.08
UCECchr1182867012Missense_MutationNAI509S0.17
UCECchr1182872451Missense_MutationnovelC558R0.42
UCECchr11828875383'UTRnovel0.32
UCSchr1182881318SilentnovelF893F0.52
UCSchr1182860173Missense_MutationnovelV441L0.33
UCSchr1182852330Missense_MutationnovelL117R0.34
UCSchr1182879282Missense_MutationnovelR795Q0.27

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.04170.0017831
KIRCAMP0.0890.059566
PAADAMP0.22830.085665
TGCTAMP0.34670.088103
THCAAMP0.05010.075436

Survival Analysis
CancerP-value Q-value
THYM0.044

Kaplan-Meier Survival Analysis

KIRC0.0001

Kaplan-Meier Survival Analysis

SARC0.003

Kaplan-Meier Survival Analysis

ACC0.00032

Kaplan-Meier Survival Analysis

UCS0.042

Kaplan-Meier Survival Analysis

SKCM0.047

Kaplan-Meier Survival Analysis

BRCA0.046

Kaplan-Meier Survival Analysis

KIRP0.02

Kaplan-Meier Survival Analysis

PAAD0.0028

Kaplan-Meier Survival Analysis

PCPG0.018

Kaplan-Meier Survival Analysis

READ0.035

Kaplan-Meier Survival Analysis

KICH0.047

Kaplan-Meier Survival Analysis

LIHC0.00077

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000135829 (Gene tree)
Gene ID
1660
Gene Symbol
DHX9
Alias
RHA|LKP|DDX9
Full Name
DExH-box helicase 9
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
48,679 bases
Position
chr1:182,839,304-182,887,982
Accession
2750
RBP type
canonical RBP
Summary
This gene encodes a member of the DEAH-containing family of RNA helicases. The encoded protein is an enzyme that catalyzes the ATP-dependent unwinding of double-stranded RNA and DNA-RNA complexes. This protein localizes to both the nucleus and the cytoplasm and functions as a transcriptional regulator. This protein may also be involved in the expression and nuclear export of retroviral RNAs. Alternate splicing results in multiple transcript variants. Pseudogenes of this gene are found on chromosomes 11 and 13.[provided by RefSeq, Feb 2010]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000356520dsrmPF00035.265.4e-2612
ENSP00000356520dsrmPF00035.265.4e-2622
ENSP00000356520DEADPF00270.295.9e-0611
ENSP00000356520HA2PF04408.233.5e-1511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNANascentRICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
24726449Different activities of the conserved lysine residues in the double-stranded RNA binding domains of RNA helicase A in vitro and in the cell.Biochim Biophys Acta2014 JulXing Ldoi: 10.1016/j.bbagen.2014.04.003
25564528RNA helicase A activity is inhibited by oncogenic transcription factor EWS-FLI1.Nucleic Acids Res2015 JanErkizan HVdoi: 10.1093/nar/gku1328
22446849(1)H, (13)C, and (15)N resonance assignments of the dsRBDs of mouse RNA helicase A.Biomol NMR Assign2013 AprNagata Tdoi: 10.1007/s12104-012-9380-3
24914047Repetitive RNA unwinding by RNA helicase A facilitates RNA annealing.Nucleic Acids Res2014 JulKoh HRdoi: 10.1093/nar/gku523
9671709Activities of adenovirus virus-associated RNAs: purification and characterization of RNA binding proteins.Proc Natl Acad Sci U S A1998 Jul 21Liao HJ-
7685763RNA annealing activity is intrinsically associated with U2AF.J Biol Chem1993 Jun 25Lee CG-
12946349Selective regulation of gene expression by nuclear factor 110, a member of the NF90 family of double-stranded RNA-binding proteins.J Mol Biol2003 Sep 5Reichman TW-
11096080A Role of RNA Helicase A in cis-Acting Transactivation Response Element-mediated Transcriptional Regulation of Human Immunodeficiency Virus Type 1.J Biol Chem2001 Feb 23Fujii R-
22454253Solution structures of the double-stranded RNA-binding domains from RNA helicase A.Proteins2012 JunNagata Tdoi: 10.1002/prot.24059
21386893NF90 binds the dengue virus RNA 3' terminus and is a positive regulator of dengue virus replication.PLoS One2011 Feb 28Gomila RCdoi: 10.1371/journal.pone.0016687.
21123178Features of double-stranded RNA-binding domains of RNA helicase A are necessary for selective recognition and translation of complex mRNAs.J Biol Chem2011 Feb 18Ranji Adoi: 10.1074/jbc.M110.176339
12209530Effect of an exogenous trigger on the pathogenesis of lupus in (NZB x NZW)F1 mice.Arthritis Rheum2002 AugYoshida H-
23015696In vitro and in vivo analysis of the interaction between RNA helicase A and HIV-1 RNA.J Virol2012 DecXing Ldoi: 10.1128/JVI.01993-12
24223160Roles of the linker region of RNA helicase A in HIV-1 RNA metabolism.PLoS One2013 Nov 6Xing Ldoi: 10.1371/journal.pone.0078596
28934014Nucleoplasmic Nup98 controls gene expression by regulating a DExH/D-box protein.Nucleus2018 Jan 1Capitanio JSdoi: 10.1080/19491034.2017.1364826
29765512DHX9 regulates production of hepatitis B virus-derived circular RNA and viral protein levels.Oncotarget2018 Apr 20Sekiba Kdoi: 10.18632/oncotarget.25104
15995249Nuclear DNA helicase II (RNA helicase A) interacts with Werner syndrome helicase and stimulates its exonuclease activity.J Biol Chem2005 Sep 2Friedemann J-
21957149DHX9 pairs with IPS-1 to sense double-stranded RNA in myeloid dendritic cells.J Immunol2011 Nov 1Zhang Zdoi: 10.4049/jimmunol.1101307
21247876Evidence that Lin28 stimulates translation by recruiting RNA helicase A to polysomes.Nucleic Acids Res2011 MayJin Jdoi: 10.1093/nar/gkq1350
20569003Monoclonal antibody specific for Dhx9/NDHII/RHA.Hybridoma (Larchmt)2010 JunKotani Mdoi: 10.1089/hyb.2009.0107.
25964201An Oral Formulation of YK-4-279: Preclinical Efficacy and Acquired Resistance Patterns in Ewing Sarcoma.Mol Cancer Ther2015 JulLamhamedi-Cherradi SEdoi: 10.1158/1535-7163.MCT-14-0334
30805612Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1,2 of Drosophila helicase Maleless.Nucleic Acids Res2019 May 7Ankush Jagtap PKdoi: 10.1093/nar/gkz125.
24965446Host factors that interact with the pestivirus N-terminal protease, Npro, are components of the ribonucleoprotein complex.J Virol2014 SepJefferson Mdoi: 10.1128/JVI.00984-14
9184214The NTPase/helicase activities of Drosophila maleless, an essential factor in dosage compensation.EMBO J1997 May 15Lee CG-
16935882DExD/H box RNA helicases: multifunctional proteins with important roles in transcriptional regulation.Nucleic Acids Res2006Fuller-Pace FV-
14729462Nuclear DNA helicase II (RNA helicase A) binds to an F-actin containing shell that surrounds the nucleolus.Exp Cell Res2004 Feb 15Zhang S-
8041617Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases.Nucleic Acids Res1994 Jul 11Gibson TJ-
10951562Sam68, RNA helicase A and Tap cooperate in the post-transcriptional regulation of human immunodeficiency virus and type D retroviral mRNA.Oncogene2000 Jul 27Reddy TR-
10648781Multiple copies of the Mason-Pfizer monkey virus constitutive RNA transport element lead to enhanced HIV-1 Gag expression in a context-dependent manner.Nucleic Acids Res2000 Feb 15Wodrich H-
18519039The p53 target protein Wig-1 binds hnRNP A2/B1 and RNA Helicase A via RNA.FEBS Lett2008 Jun 25Prahl Mdoi: 10.1016/j.febslet.2008.04.065
10198287Pre-mRNA and mRNA binding of human nuclear DNA helicase II (RNA helicase A).J Cell Sci1999 AprZhang S-
11038348Sequence-specific DNA binding activity of RNA helicase A to the p16INK4a promoter.J Biol Chem2001 Jan 12Myohanen S-
10924507Specific interaction between RNA helicase A and Tap, two cellular proteins that bind to the constitutive transport element of type D retrovirus.J Biol Chem2000 Oct 20Tang H-
10748171A novel shuttle protein binds to RNA helicase A and activates the retroviral constitutive transport element.J Biol Chem2000 Jul 14Westberg C-
14500838dsRBM1 and a proline-rich domain of RNA helicase A can form a composite binder to recognize a specific dsDNA.Nucleic Acids Res2003 Oct 1Hung ML-
19584866A small molecule blocking oncogenic protein EWS-FLI1 interaction with RNA helicase A inhibits growth of Ewing's sarcoma.Nat Med2009 JulErkizan HVdoi: 10.1038/nm.1983
23361462Structural insights into RISC assembly facilitated by dsRNA-binding domains of human RNA helicase A (DHX9).Nucleic Acids Res2013 Mar 1Fu Qdoi: 10.1093/nar/gkt042
20802156RNA helicase A is a DNA-binding partner for EGFR-mediated transcriptional activation in the nucleus.Proc Natl Acad Sci U S A2010 Sep 14Huo Ldoi: 10.1073/pnas.1000743107
25149208Role of the OB-fold of RNA helicase A in the synthesis of HIV-1 RNA.Biochim Biophys Acta2014 NovXing Ldoi: 10.1016/j.bbagrm.2014.08.008
24667787Characterization of the transcriptional machinery bound across the widely presumed type 2 diabetes causal variant, rs7903146, within TCF7L2.Eur J Hum Genet2015 JanXia Qdoi: 10.1038/ejhg.2014.48
25062910Helicase associated 2 domain is essential for helicase activity of RNA helicase A.Biochim Biophys Acta2014 OctXing Ldoi: 10.1016/j.bbapap.2014.07.001
12163469Nuclear DNA helicase II is recruited to IFN-alpha-activated transcription sites at PML nuclear bodies.J Cell Biol2002 Aug 5Fuchsova B-
15355351RNA helicase A interacts with nuclear factor kappaB p65 and functions as a transcriptional coactivator.Eur J Biochem2004 SepTetsuka T-
10413677Nucleolar localization of murine nuclear DNA helicase II (RNA helicase A).J Cell Sci1999 AugZhang S-
12851713Aromatic residues are required for RNA helicase A mediated transactivation.Int J Mol Med2003 AugAratani S-
12665568Antithetic effects of MBD2a on gene regulation.Mol Cell Biol2003 AprFujita H-
11416126Dual roles of RNA helicase A in CREB-dependent transcription.Mol Cell Biol2001 JulAratani S-
16187064Re-localization of nuclear DNA helicase II during the growth period of bovine oocytes.Histochem Cell Biol2006 JanBaran V-
18068128Functional role of Zic2 phosphorylation in transcriptional regulation.FEBS Lett2008 Jan 23Ishiguro A-
17015016A new model for translational regulation of specific mRNAs.Trends Biochem Sci2006 NovTettweiler G-
23220337RNA helicase is involved in the expression and replication of classical swine fever virus and interacts with untranslated region.Virus Res2013 JanSheng Cdoi: 10.1016/j.virusres.2012.11.014
20510246Crystal structure of human RNA helicase A (DHX9): structural basis for unselective nucleotide base binding in a DEAD-box variant protein.J Mol Biol2010 Jul 23Schutz Pdoi: 10.1016/j.jmb.2010.05.046
20512115Prp43p contains a processive helicase structural architecture with a specific regulatory domain.EMBO J2010 Jul 7Walbott Hdoi: 10.1038/emboj.2010.102
24719423hnRNP L and NF90 interact with hepatitis C virus 5'-terminal untranslated RNA and promote efficient replication.J Virol2014 JulLi Ydoi: 10.1128/JVI.00225-14
23853588Myxoma virus protein M029 is a dual function immunomodulator that inhibits PKR and also conscripts RHA/DHX9 to promote expanded host tropism and viral replication.PLoS Pathog2013Rahman MMdoi: 10.1371/journal.ppat.1003465
27011170LARP6 Meets Collagen mRNA: Specific Regulation of Type I Collagen Expression.Int J Mol Sci2016 Mar 22Zhang Ydoi: 10.3390/ijms17030419.
27107641DHX9/RHA Binding to the PBS-Segment of the Genomic RNA during HIV-1 Assembly Bolsters Virion Infectivity.J Mol Biol2016 Jun 5Boeras Idoi: 10.1016/j.jmb.2016.04.011
28588071The RNA helicase DHX9 establishes nucleolar heterochromatin, and this activity is required for embryonic stem cell differentiation.EMBO Rep2017 JulLeone Sdoi: 10.15252/embr.201744330
30137501A DNA-sensing-independent role of a nuclear RNA helicase, DHX9, in stimulation of NF-kB-mediated innate immunity against DNA virus infection.Nucleic Acids Res2018 Sep 28Ng YCdoi: 10.1093/nar/gky742.
30463980The Host DHX9 DExH-Box Helicase Is Recruited to Chikungunya Virus Replication Complexes for Optimal Genomic RNA Translation.J Virol2019 Feb 5Matkovic Rdoi: 10.1128/JVI.01764-18
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000490519DHX9-208438--- (aa)--
ENST00000483416DHX9-206814--- (aa)--
ENST00000479271DHX9-205316--- (aa)--
ENST00000477802DHX9-204456--- (aa)--
ENST00000485081DHX9-2072531--- (aa)--
ENST00000474446DHX9-203848--- (aa)--
ENST00000473076DHX9-2021378--- (aa)--
ENST00000367549DHX9-2014240-ENSP000003565201270 (aa)-Q08211
Gene Model
Click here to download ENSG00000135829's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000135829's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000135829DHX96035.930ENSG00000163214DHX579932.230
ENSG00000135829DHX96333.839ENSG00000067248DHX296533.148
ENSG00000135829DHX95833.858ENSG00000132153DHX306333.858
ENSG00000135829DHX95938.501ENSG00000174953DHX369543.602
ENSG00000135829DHX96048.529ENSG00000047188YTHDC25548.529
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000135829DHX99296.410ENSAMEG00000002233DHX99894.056Ailuropoda_melanoleuca
ENSG00000135829DHX99277.013ENSACIG00000016431dhx99874.941Amphilophus_citrinellus
ENSG00000135829DHX98576.923ENSAOCG00000010719dhx99877.344Amphiprion_ocellaris
ENSG00000135829DHX99277.740ENSAPEG00000006339dhx99675.339Amphiprion_percula
ENSG00000135829DHX99278.003ENSATEG00000007101dhx910078.205Anabas_testudineus
ENSG00000135829DHX99284.681ENSACAG00000005023DHX99384.681Anolis_carolinensis
ENSG00000135829DHX910098.425ENSANAG00000030279DHX910098.425Aotus_nancymaae
ENSG00000135829DHX99676.094ENSACLG00000022296dhx99978.128Astatotilapia_calliptera
ENSG00000135829DHX99295.214ENSBTAG00000019821DHX99195.214Bos_taurus
ENSG00000135829DHX99841.602WBGene00004355rha-19142.739Caenorhabditis_elegans
ENSG00000135829DHX910098.189ENSCJAG00000004821DHX910098.295Callithrix_jacchus
ENSG00000135829DHX99295.812ENSCAFG00000013205DHX99893.976Canis_familiaris
ENSG00000135829DHX99295.812ENSCAFG00020014886DHX99893.976Canis_lupus_dingo
ENSG00000135829DHX99292.130ENSCHIG00000018643DHX99890.499Capra_hircus
ENSG00000135829DHX99296.410ENSTSYG00000007970DHX910095.758Carlito_syrichta
ENSG00000135829DHX98574.539ENSCAPG00000015604DHX98976.842Cavia_aperea
ENSG00000135829DHX99888.672ENSCPOG00000040669DHX99289.754Cavia_porcellus
ENSG00000135829DHX99098.568ENSCCAG00000022597DHX910098.568Cebus_capucinus
ENSG00000135829DHX910099.216ENSCATG00000027871DHX910099.216Cercocebus_atys
ENSG00000135829DHX99293.606ENSCLAG00000010684DHX99191.554Chinchilla_lanigera
ENSG00000135829DHX98799.104ENSCSAG00000012549DHX99999.104Chlorocebus_sabaeus
ENSG00000135829DHX99185.243ENSCHOG00000012736DHX99985.417Choloepus_hoffmanni
ENSG00000135829DHX99387.648ENSCPBG00000015757DHX99884.652Chrysemys_picta_bellii
ENSG00000135829DHX99459.655ENSCSAVG00000001493-10061.005Ciona_savignyi
ENSG00000135829DHX910099.449ENSCANG00000032888DHX910099.550Colobus_angolensis_palliatus
ENSG00000135829DHX99293.089ENSCGRG00001015796Dhx99593.089Cricetulus_griseus_chok1gshd
ENSG00000135829DHX99293.089ENSCGRG00000011336Dhx98793.089Cricetulus_griseus_crigri
ENSG00000135829DHX99074.805ENSCSEG00000017621dhx99974.805Cynoglossus_semilaevis
ENSG00000135829DHX98878.660ENSCVAG00000009479dhx99875.934Cyprinodon_variegatus
ENSG00000135829DHX99278.867ENSDARG00000079725dhx99776.061Danio_rerio
ENSG00000135829DHX99395.678ENSDNOG00000004038DHX99892.995Dasypus_novemcinctus
ENSG00000135829DHX99294.535ENSDORG00000012610Dhx99191.374Dipodomys_ordii
ENSG00000135829DHX99350.617FBgn0002774mle8854.227Drosophila_melanogaster
ENSG00000135829DHX99481.319ENSETEG00000009729DHX99074.166Echinops_telfairi
ENSG00000135829DHX98365.695ENSEBUG00000015945-8869.102Eptatretus_burgeri
ENSG00000135829DHX99296.496ENSEASG00005006589DHX99893.780Equus_asinus_asinus
ENSG00000135829DHX99296.496ENSECAG00000011933DHX99893.780Equus_caballus
ENSG00000135829DHX98192.817ENSEEUG00000004824DHX98192.817Erinaceus_europaeus
ENSG00000135829DHX99277.554ENSELUG00000010512dhx99377.722Esox_lucius
ENSG00000135829DHX99396.177ENSFCAG00000019306DHX99894.476Felis_catus
ENSG00000135829DHX99180.289ENSFALG00000002992DHX99481.683Ficedula_albicollis
ENSG00000135829DHX99790.184ENSFDAG00000011454DHX910091.180Fukomys_damarensis
ENSG00000135829DHX99388.190ENSGAGG00000024443DHX99687.695Gopherus_agassizii
ENSG00000135829DHX99386.311ENSGGOG00000040887-9986.003Gorilla_gorilla
ENSG00000135829DHX910099.921ENSGGOG00000013533DHX910099.921Gorilla_gorilla
ENSG00000135829DHX99675.851ENSHBUG00000004129dhx99377.815Haplochromis_burtoni
ENSG00000135829DHX99293.265ENSHGLG00000005769DHX99190.625Heterocephalus_glaber_female
ENSG00000135829DHX99293.265ENSHGLG00100015628DHX98890.625Heterocephalus_glaber_male
ENSG00000135829DHX99278.741ENSIPUG00000016675dhx99178.693Ictalurus_punctatus
ENSG00000135829DHX99292.143ENSJJAG00000003249Dhx98692.485Jaculus_jaculus
ENSG00000135829DHX99395.270ENSLAFG00000022058DHX99892.103Loxodonta_africana
ENSG00000135829DHX910099.685ENSMFAG00000041152DHX910099.685Macaca_fascicularis
ENSG00000135829DHX910099.685ENSMMUG00000005635DHX910099.685Macaca_mulatta
ENSG00000135829DHX910099.685ENSMNEG00000041195DHX910099.685Macaca_nemestrina
ENSG00000135829DHX910099.606ENSMLEG00000039925DHX910099.606Mandrillus_leucophaeus
ENSG00000135829DHX99278.438ENSMAMG00000018644dhx99978.523Mastacembelus_armatus
ENSG00000135829DHX99676.094ENSMZEG00005014167dhx99378.067Maylandia_zebra
ENSG00000135829DHX99293.089ENSMAUG00000020414Dhx98593.089Mesocricetus_auratus
ENSG00000135829DHX99296.410ENSMICG00000008285DHX99893.881Microcebus_murinus
ENSG00000135829DHX99293.345ENSMOCG00000019404Dhx98593.345Microtus_ochrogaster
ENSG00000135829DHX98974.803ENSMMOG00000001268dhx99874.716Mola_mola
ENSG00000135829DHX99290.794ENSMODG00000006955DHX99888.523Monodelphis_domestica
ENSG00000135829DHX99177.277ENSMALG00000000318dhx910077.400Monopterus_albus
ENSG00000135829DHX99293.339MGP_CAROLIEiJ_G0014709Dhx910091.293Mus_caroli
ENSG00000135829DHX99293.424ENSMUSG00000042699Dhx910091.429Mus_musculus
ENSG00000135829DHX99293.339MGP_SPRETEiJ_G0015516Dhx99796.250Mus_spretus
ENSG00000135829DHX99396.347ENSMPUG00000011544DHX99896.347Mustela_putorius_furo
ENSG00000135829DHX99293.846ENSMLUG00000011163DHX99891.888Myotis_lucifugus
ENSG00000135829DHX910099.373ENSNLEG00000018013DHX910099.373Nomascus_leucogenys
ENSG00000135829DHX97093.750ENSMEUG00000001470-7693.750Notamacropus_eugenii
ENSG00000135829DHX98492.308ENSOPRG00000016111DHX99392.308Ochotona_princeps
ENSG00000135829DHX99292.424ENSODEG00000012659DHX99289.486Octodon_degus
ENSG00000135829DHX99278.002ENSONIG00000000293dhx99775.594Oreochromis_niloticus
ENSG00000135829DHX99290.248ENSOANG00000000989DHX99290.334Ornithorhynchus_anatinus
ENSG00000135829DHX99295.396ENSOCUG00000014651DHX99892.754Oryctolagus_cuniculus
ENSG00000135829DHX99277.280ENSORLG00000007454dhx99675.000Oryzias_latipes
ENSG00000135829DHX99277.020ENSORLG00020015369dhx99676.897Oryzias_latipes_hni
ENSG00000135829DHX99376.775ENSORLG00015000892dhx99974.284Oryzias_latipes_hsok
ENSG00000135829DHX99277.937ENSOMEG00000002437dhx99977.937Oryzias_melastigma
ENSG00000135829DHX99294.710ENSOGAG00000002620DHX99893.650Otolemur_garnettii
ENSG00000135829DHX99294.620ENSOARG00000019089DHX99194.881Ovis_aries
ENSG00000135829DHX9100100.000ENSPPAG00000030190DHX9100100.000Pan_paniscus
ENSG00000135829DHX99296.170ENSPPRG00000005890DHX99894.767Panthera_pardus
ENSG00000135829DHX99296.170ENSPTIG00000021059DHX99894.767Panthera_tigris_altaica
ENSG00000135829DHX9100100.000ENSPTRG00000001759DHX9100100.000Pan_troglodytes
ENSG00000135829DHX910099.216ENSPANG00000012826DHX910099.216Papio_anubis
ENSG00000135829DHX99875.179ENSPKIG00000006698dhx99378.553Paramormyrops_kingsleyae
ENSG00000135829DHX99387.279ENSPSIG00000006241DHX99884.370Pelodiscus_sinensis
ENSG00000135829DHX99278.565ENSPMGG00000009280dhx99675.381Periophthalmus_magnuspinnatus
ENSG00000135829DHX99293.174ENSPEMG00000001238Dhx98593.174Peromyscus_maniculatus_bairdii
ENSG00000135829DHX99291.126ENSPCIG00000003716DHX99891.468Phascolarctos_cinereus
ENSG00000135829DHX99178.024ENSPFOG00000019152-10078.024Poecilia_formosa
ENSG00000135829DHX99278.257ENSPLAG00000001496dhx99678.154Poecilia_latipinna
ENSG00000135829DHX99177.939ENSPMEG00000019991dhx99977.939Poecilia_mexicana
ENSG00000135829DHX99277.273ENSPREG00000019307dhx99777.395Poecilia_reticulata
ENSG00000135829DHX910099.843ENSPPYG00000000431DHX910099.843Pongo_abelii
ENSG00000135829DHX98696.104ENSPCAG00000011042DHX99193.202Procavia_capensis
ENSG00000135829DHX99396.599ENSPCOG00000018029DHX99893.961Propithecus_coquereli
ENSG00000135829DHX99295.047ENSPVAG00000000836DHX99893.403Pteropus_vampyrus
ENSG00000135829DHX99277.496ENSPNYG00000008480dhx99975.859Pundamilia_nyererei
ENSG00000135829DHX99279.269ENSPNAG00000021343dhx99873.913Pygocentrus_nattereri
ENSG00000135829DHX99293.350ENSRNOG00000002735Dhx99993.345Rattus_norvegicus
ENSG00000135829DHX910099.528ENSRBIG00000041202DHX910099.528Rhinopithecus_bieti
ENSG00000135829DHX910099.528ENSRROG00000044740DHX910099.528Rhinopithecus_roxellana
ENSG00000135829DHX910093.412ENSSBOG00000026174DHX910093.412Saimiri_boliviensis_boliviensis
ENSG00000135829DHX99291.567ENSSHAG00000008540DHX99791.993Sarcophilus_harrisii
ENSG00000135829DHX99278.154ENSSFOG00015017378dhx99279.518Scleropages_formosus
ENSG00000135829DHX99176.669ENSSDUG00000017407dhx910076.669Seriola_dumerili
ENSG00000135829DHX99078.068ENSSLDG00000003926dhx99978.068Seriola_lalandi_dorsalis
ENSG00000135829DHX98396.413ENSSARG00000003931DHX99296.413Sorex_araneus
ENSG00000135829DHX99287.149ENSSPUG00000003934DHX99287.149Sphenodon_punctatus
ENSG00000135829DHX99295.389ENSSSCG00000026806DHX98495.400Sus_scrofa
ENSG00000135829DHX96878.382ENSTGUG00000004038-10078.382Taeniopygia_guttata
ENSG00000135829DHX98079.624ENSTBEG00000014052DHX98079.624Tupaia_belangeri
ENSG00000135829DHX99193.588ENSTTRG00000007665DHX910093.588Tursiops_truncatus
ENSG00000135829DHX99296.410ENSUAMG00000012201DHX910095.321Ursus_americanus
ENSG00000135829DHX99296.496ENSUMAG00000016482DHX99894.137Ursus_maritimus
ENSG00000135829DHX98691.529ENSVPAG00000008097DHX98691.529Vicugna_pacos
ENSG00000135829DHX99295.812ENSVVUG00000008915DHX99893.896Vulpes_vulpes
ENSG00000135829DHX99381.435ENSXETG00000012515dhx99381.664Xenopus_tropicalis
ENSG00000135829DHX99278.003ENSXMAG00000011305dhx99477.937Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000380alternative mRNA splicing, via spliceosome28221134.IMPProcess
GO:0000398mRNA splicing, via spliceosome-TASProcess
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding11038348.IDAFunction
GO:0000993RNA polymerase II complex binding11416126.IDAFunction
GO:0001069regulatory region RNA binding28355180.IDAFunction
GO:0001085RNA polymerase II transcription factor binding17303075.IPIFunction
GO:0001649osteoblast differentiation16210410.HDAProcess
GO:0003677DNA binding-ISSFunction
GO:0003688DNA replication origin binding24990949.IDAFunction
GO:0003690double-stranded DNA binding9111062.12711669.IDAFunction
GO:0003697single-stranded DNA binding9111062.10198287.20696886.21957149.IDAFunction
GO:0003712transcription coregulator activity11416126.IMPFunction
GO:0003713transcription coactivator activity9323138.IMPFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding1537828.IDAFunction
GO:0003724RNA helicase activity8690889.TASFunction
GO:0003725double-stranded RNA binding9111062.10198287.12711669.21957149.27107641.28636595.IDAFunction
GO:0003727single-stranded RNA binding9111062.10198287.IDAFunction
GO:0003729mRNA binding10198287.IDAFunction
GO:0003729mRNA binding28221134.IMPFunction
GO:0004003ATP-dependent DNA helicase activity21873635.IBAFunction
GO:0004003ATP-dependent DNA helicase activity12711669.IMPFunction
GO:0004004ATP-dependent RNA helicase activity28221134.IDAFunction
GO:0004004ATP-dependent RNA helicase activity-ISSFunction
GO:0005515protein binding9323138.9662397.10924507.11402034.11687588.12711669.14704337.15084609.15355351.17289661.17498979.17531811.18519039.18596238.19955415.20123736.20696886.21247876.21849455.21903422.22190748.23361462.23652018.23986595.24965446.28221134.28355180.28636595.29395061.IPIFunction
GO:0005524ATP binding11416126.IDAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus9162007.10198287.10207077.11687588.15121898.16375861.16680162.17498979.24965446.IDAComponent
GO:0005654nucleoplasm28221134.IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005726perichromatin fibrils10198287.IDAComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005737cytoplasm9162007.10198287.10207077.16375861.16680162.20696886.IDAComponent
GO:0005813centrosome17498979.IDAComponent
GO:0005829cytosol-TASComponent
GO:0005844polysome21247876.22190748.IDAComponent
GO:0006260DNA replication-IEAProcess
GO:0006353DNA-templated transcription, termination-IEAProcess
GO:0006357regulation of transcription by RNA polymerase II9662397.IMPProcess
GO:0006954inflammatory response-IEAProcess
GO:0010501RNA secondary structure unwinding1537828.9111062.IDAProcess
GO:0015629actin cytoskeleton11687588.IDAComponent
GO:0016020membrane16210410.19946888.HDAComponent
GO:0016604nuclear body28221134.IDAComponent
GO:0016887ATPase activity11416126.IMPFunction
GO:0016887ATPase activity-ISSFunction
GO:0017111nucleoside-triphosphatase activity-ISSFunction
GO:0030423targeting of mRNA for destruction involved in RNA interference17531811.IMPProcess
GO:0031490chromatin DNA binding24049074.IDAFunction
GO:0032481positive regulation of type I interferon production-TASProcess
GO:0032508DNA duplex unwinding9111062.21561811.IDAProcess
GO:0032508DNA duplex unwinding12711669.IMPProcess
GO:0032508DNA duplex unwinding-ISSProcess
GO:0032741positive regulation of interleukin-18 production-ISSProcess
GO:0032991protein-containing complex11687588.IDAComponent
GO:0033681ATP-dependent 3'-5' DNA/RNA helicase activity1537828.21561811.IDAFunction
GO:0034459ATP-dependent 3'-5' RNA helicase activity21873635.IBAFunction
GO:0034459ATP-dependent 3'-5' RNA helicase activity1537828.21561811.IDAFunction
GO:0035068micro-ribonucleoprotein complex17531811.23361462.IDAComponent
GO:0035197siRNA binding23361462.IDAFunction
GO:0035549positive regulation of interferon-beta secretion21957149.IMPProcess
GO:0035613RNA stem-loop binding11096080.16680162.IDAFunction
GO:0036464cytoplasmic ribonucleoprotein granule10198287.15121898.IDAComponent
GO:0039695DNA-templated viral transcription11096080.IDAProcess
GO:0042788polysomal ribosome16680162.IDAComponent
GO:0043140ATP-dependent 3'-5' DNA helicase activity21873635.IBAFunction
GO:0043140ATP-dependent 3'-5' DNA helicase activity21561811.IDAFunction
GO:0043140ATP-dependent 3'-5' DNA helicase activity-ISSFunction
GO:0044806G-quadruplex DNA unwinding21561811.IDAProcess
GO:0045087innate immune response-IEAProcess
GO:0045089positive regulation of innate immune response-ISSProcess
GO:0045142triplex DNA binding24049074.IDAFunction
GO:0045739positive regulation of DNA repair24049074.IMPProcess
GO:0045740positive regulation of DNA replication24990949.IMPProcess
GO:0045944positive regulation of transcription by RNA polymerase II21873635.IBAProcess
GO:0045944positive regulation of transcription by RNA polymerase II9323138.11038348.11416126.21957149.IMPProcess
GO:0046833positive regulation of RNA export from nucleus11402034.IDAProcess
GO:0046872metal ion binding-IEAFunction
GO:0047429nucleoside-triphosphate diphosphatase activity1537828.IDAFunction
GO:0048146positive regulation of fibroblast proliferation24990949.IMPProcess
GO:0048511rhythmic process-IEAProcess
GO:0050434positive regulation of viral transcription11096080.IDAProcess
GO:0050684regulation of mRNA processing21873635.IBAProcess
GO:0050684regulation of mRNA processing28355180.IDAProcess
GO:0050691regulation of defense response to virus by host-ISSProcess
GO:0050729positive regulation of inflammatory response-ISSProcess
GO:0051028mRNA transport-IEAProcess
GO:0051092positive regulation of NF-kappaB transcription factor activity15355351.IMPProcess
GO:0060760positive regulation of response to cytokine stimulus21957149.IMPProcess
GO:0061676importin-alpha family protein binding16375861.IDAFunction
GO:0070063RNA polymerase binding9323138.IDAFunction
GO:0070269pyroptosis-ISSProcess
GO:0070578RISC-loading complex17531811.IMPComponent
GO:0070922small RNA loading onto RISC17531811.IMPProcess
GO:0070934CRD-mediated mRNA stabilization19029303.IMPProcess
GO:0070937CRD-mediated mRNA stability complex19029303.IDAComponent
GO:0071356cellular response to tumor necrosis factor15355351.IMPProcess
GO:0071360cellular response to exogenous dsRNA21957149.IMPProcess
GO:0097165nuclear stress granule10198287.IDAComponent
GO:0097165nuclear stress granule24965446.IMPComponent
GO:1902741positive regulation of interferon-alpha secretion21957149.IMPProcess
GO:1903608protein localization to cytoplasmic stress granule24965446.IMPProcess
GO:1904469positive regulation of tumor necrosis factor secretion20696886.21957149.IMPProcess
GO:1904973positive regulation of viral translation16680162.IMPProcess
GO:1905172RISC complex binding17531811.IDAFunction
GO:1905538polysome binding16680162.21247876.IDAFunction
GO:1905698positive regulation of polysome binding22190748.IMPProcess
GO:1990518single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity20669935.24049074.IDAFunction
GO:1990825sequence-specific mRNA binding9162007.11402034.IDAFunction
GO:1990841promoter-specific chromatin binding28221134.IMPFunction
GO:1990904ribonucleoprotein complex21873635.IBAComponent
GO:1990904ribonucleoprotein complex11402034.12711669.14704337.16680162.17289661.18809582.22190748.IDAComponent
GO:1990904ribonucleoprotein complex28221134.IMPComponent
GO:2000373positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity12711669.IMPProcess
GO:2000637positive regulation of gene silencing by miRNA17531811.IMPProcess
GO:2000765regulation of cytoplasmic translation28355180.IDAProcess
GO:2000767positive regulation of cytoplasmic translation16680162.21247876.22190748.IMPProcess
GO:2000778positive regulation of interleukin-6 secretion20696886.21957149.IMPProcess
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