EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
23236152Evolutionarily conserved protein ERH controls CENP-E mRNA splicing and is required for the survival of KRAS mutant cancer cells.Proc Natl Acad Sci U S A2012 Dec 26Weng MTdoi: 10.1073/pnas.1207673110
24928852Chemogenetic evaluation of the mitotic kinesin CENP-E reveals a critical role in triple-negative breast cancer.Mol Cancer Ther2014 AugKung PPdoi: 10.1158/1535-7163.MCT-14-0083-T

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr4103145315Missense_MutationnovelK1531R0.42
ACCchr4103161409Nonsense_MutationnovelE631*0.11
ACCchr4103110954Missense_MutationnovelG2533V0.48
ACCchr4103145088Missense_MutationnovelD1607Y0.39
ACCchr4103159131Missense_MutationnovelM827K0.49
ACCchr4103181375Nonsense_MutationnovelR349*0.31
BLCAchr4103153166Missense_MutationnovelE1040Q0.4
BLCAchr4103195227Missense_MutationnovelD122H0.11
BLCAchr4103136338Missense_MutationnovelE2109Q0.16
BLCAchr4103145080SilentnovelL1609L0.26
BLCAchr4103114552Frame_Shift_InsnovelE2481Dfs*190.11
BLCAchr4103161448Missense_MutationnovelE618K0.43
BLCAchr4103182774SilentNAL317L0.16
BLCAchr4103123068Missense_MutationNAE2316Q0.51
BLCAchr4103159145Missense_MutationNAF822L0.12
BLCAchr4103194442Splice_SitenovelX187_splice0.22
BLCAchr4103139900SilentNAL2031L0.33
BLCAchr4103158812Silentrs758479628L892L0.31
BLCAchr4103146047Missense_MutationnovelT1399A0.51
BLCAchr4103159147Missense_MutationnovelF822V0.52
BLCAchr4103160634SilentnovelL759L0.42
BLCAchr4103161215Missense_MutationnovelD668N0.28
BLCAchr4103153220Missense_MutationnovelE1022K0.82
BLCAchr4103148930Nonsense_MutationNAE1253*0.31
BLCAchr4103146035Missense_Mutationrs377439303V1403M0.16
BLCAchr4103116653Missense_MutationnovelE2456K0.2
BLCAchr4103161164Missense_MutationNAD685N0.27
BLCAchr4103161252Splice_SiteNAX656_splice0.22
BLCAchr4103181369Nonsense_MutationnovelE351*0.2
BLCAchr4103145827Splice_SiteNAX1471_splice0.22
BLCAchr4103148968Missense_MutationnovelA1240V0.25
BRCAchr4103140884Missense_MutationNAR1895I0.32
BRCAchr4103159182Missense_Mutationrs779464384S810L0.37
BRCAchr4103145609SilentNAL1496L0.38
BRCAchr41031983255'UTRnovel0.29
BRCAchr4103144594Missense_MutationNAY1628H0.26
BRCAchr4103163481Missense_MutationNAE574Q0.27
BRCAchr4103139866Nonsense_MutationNAE2043*0.45
BRCAchr4103145617Missense_MutationnovelI1493T0.08
BRCAchr4103141009Missense_MutationnovelK1853N0.08
BRCAchr4103194654Missense_MutationNAE170K0.21
BRCAchr4103176955Missense_MutationNAN445T0.18
BRCAchr4103158433Missense_Mutationrs201196207R967Q0.12
BRCAchr4103195182Missense_MutationNAE137K0.14
BRCAchr4103174795Missense_MutationnovelE530Q0.13
BRCAchr4103138416Missense_MutationNAR2080G0.18
BRCAchr4103139881Missense_MutationNAA2038P0.23
BRCAchr4103141039SilentnovelQ1843Q0.1
BRCAchr4103145226Missense_MutationNAD1561N0.22
BRCAchr4103144529Missense_MutationNAL1649F0.22
BRCAchr4103148966Missense_MutationNAH1241Y0.2
BRCAchr4103153144Missense_MutationNAS1047Y0.12
BRCAchr4103174856Missense_MutationNAN509K0.21
BRCAchr4103145579Missense_MutationNAE1506Q0.16
BRCAchr4103145984Missense_MutationNAE1420Q0.15
BRCAchr4103140811Splice_Regionnovel0.24
BRCAchr4103183273Missense_MutationnovelE254V0.08
BRCAchr4103149344In_Frame_InsnovelQ1154delinsLIKE0.05
BRCAchr4103158768Frame_Shift_InsnovelE907Gfs*120.06
BRCAchr4103158770Nonsense_MutationnovelE907Tfs*50.04
BRCAchr4103140073Missense_MutationNAE1974Q0.11
BRCAchr4103146061Missense_MutationnovelE1394V0.1
BRCAchr4103140402Nonsense_MutationnovelQ1923*0.03
BRCAchr4103174858Missense_MutationNAN509D0.13
BRCAchr4103143304Nonsense_MutationNAE1750*0.42
BRCAchr4103145285Missense_MutationnovelS1541N0.1
CESCchr4103147607Missense_Mutationrs771685356V1295M0.22
CESCchr4103159222Missense_MutationNAE797K0.12
CESCchr4103163494Nonsense_MutationnovelY569*0.21
CESCchr4103146023Nonsense_MutationNAE1407*0.26
CESCchr4103139860Frame_Shift_DelnovelR2045Efs*230.08
CESCchr4103114498Missense_MutationNAL2499F0.14
CESCchr4103161445Missense_MutationNAD619N0.22
CESCchr4103174811Missense_MutationnovelM524I0.1
CESCchr4103180465Missense_MutationnovelS363Y0.2
CESCchr4103140058Frame_Shift_InsnovelE1979Rfs*60.25
CESCchr4103148907Missense_MutationnovelE1260D0.23
CESCchr4103145139Missense_MutationnovelK1590E0.16
CESCchr4103144375Missense_MutationnovelE1701Q0.22
CESCchr4103198310Missense_MutationnovelE4K0.31
CESCchr4103182790Missense_MutationnovelS312F0.06
CESCchr4103140312Missense_MutationnovelQ1953E0.3
CESCchr4103144616Missense_MutationnovelM1620I0.46
CHOLchr4103110984Missense_MutationnovelP2523H0.07
CHOLchr4103163176SilentnovelQ601Q0.16
COADchr4103108812Missense_MutationNAL2668I0.35
COADchr4103136356Missense_MutationNAL2103F0.37
COADchr4103159035Missense_MutationNAS859L0.24
COADchr4103151291SilentnovelA1108A0.29
COADchr4103111010Splice_RegionnovelV2514V0.28
COADchr4103148886Missense_MutationnovelN1267K0.26
COADchr4103110884Missense_MutationNAI2556M0.38
COADchr4103116590Nonsense_MutationnovelE2477*0.06
COADchr4103176963Missense_MutationnovelI442M0.35
COADchr4103132782Missense_Mutationrs544326830R2279C0.29
COADchr4103139993SilentNAE2000E0.19
COADchr4103176957SilentnovelT444T0.21
COADchr4103108928Missense_Mutationrs141321114R2629Q0.36
COADchr4103138416Frame_Shift_DelNAR2080Gfs*30.3
COADchr4103148984Nonsense_MutationNAE1235*0.34
COADchr4103153242Silentrs779763209G1014G0.33
COADchr4103108939Silentrs141957526Q2625Q0.27
COADchr4103140329Missense_MutationNAI1947N0.26
COADchr4103147584Missense_MutationnovelQ1302H0.34
COADchr4103161375Missense_MutationNAA642V0.24
COADchr4103106296Missense_MutationnovelE2678K0.04
COADchr4103140380Missense_Mutationrs115310306R1930H0.36
COADchr4103159200Missense_MutationNAD804G0.34
COADchr4103144456Missense_MutationnovelL1674V0.17
COADchr4103153238Missense_MutationNAD1016H0.4
COADchr4103153251Splice_Siters111987461X1012_splice0.4
COADchr4103140887Missense_MutationNAL1894R0.18
COADchr4103108821Missense_Mutationrs758197733S2665G0.11
COADchr4103148967Silentrs771019272A1240A0.37
COADchr4103180470Splice_SitenovelX362_splice0.16
COADchr4103194654Missense_MutationNAE170K0.27
COADchr4103146013Missense_MutationNAK1410I0.58
COADchr4103147644Splice_RegionNAI1282I0.31
COADchr4103108862Missense_MutationNAS2651Y0.13
COADchr4103132746Frame_Shift_InsnovelK2291Hfs*130.04
COADchr4103136302Frame_Shift_InsnovelS2121Efs*180.05
COADchr4103159235Frame_Shift_InsnovelQ792Hfs*160.04
ESCAchr4103194393Missense_MutationnovelS203F0.72
ESCAchr4103195134Missense_MutationnovelI153V0.67
ESCAchr4103176006Missense_MutationnovelT478R0.38
ESCAchr4103144377Missense_MutationnovelV1700A0.39
ESCAchr4103145313Missense_MutationnovelE1532K0.33
GBMchr4103144462Nonsense_MutationnovelQ1672*0.06
GBMchr4103122984Missense_MutationNAK2344E0.3
GBMchr4103158652Missense_MutationNAD946N0.41
GBMchr4103144482Missense_Mutationrs781248304T1665M0.17
GBMchr4103159088Silentrs550951923E841E0.12
GBMchr4103108888SilentNAS2642S0.06
GBMchr4103122990SilentnovelL2342L0.08
GBMchr4103158787Missense_MutationnovelS901A0.33
GBMchr4103161115Missense_MutationnovelT701I0.37
GBMchr4103147403Missense_MutationNAV1363F0.34
HNSCchr4103159124Missense_MutationnovelF829L0.28
HNSCchr4103133776SilentnovelQ2213Q0.72
HNSCchr4103120156Missense_MutationnovelV2441I0.35
HNSCchr4103161204Missense_MutationnovelL671F0.12
HNSCchr4103149134Missense_MutationnovelR1224T0.34
HNSCchr4103141070Missense_MutationnovelI1833T0.18
HNSCchr4103194242Missense_MutationnovelK227T0.19
HNSCchr4103147577Missense_Mutationrs750498079M1305V0.53
HNSCchr4103145296Missense_MutationnovelI1537M0.45
HNSCchr4103136253Missense_MutationNAR2137K0.09
HNSCchr4103158824SilentnovelE888E0.24
HNSCchr4103108914Missense_MutationnovelP2634S0.11
HNSCchr4103133769Nonsense_MutationnovelQ2216*0.24
HNSCchr4103149272Missense_MutationnovelE1178V0.51
HNSCchr4103140865SilentnovelL1901L0.04
HNSCchr41031061293'UTRnovel0.31
HNSCchr4103139796Missense_MutationnovelI2066K0.48
HNSCchr4103158406Missense_MutationnovelH976L0.7
KICHchr4103180352Missense_MutationnovelL401V0.16
KIRCchr4103141095Missense_MutationNAL1825I0.06
KIRCchr4103133783Missense_MutationNAK2211R0.22
KIRCchr4103159079Missense_MutationNAN844K0.09
KIRCchr4103160659Missense_MutationnovelS751F0.25
KIRCchr4103182892Splice_SitenovelX278_splice0.23
KIRPchr4103195139Missense_MutationnovelP151L0.14
KIRPchr4103143340Missense_MutationNAD1738H0.21
KIRPchr4103195973Missense_Mutationrs758681737H102Y0.18
KIRPchr4103195962SilentNAV105V0.2
KIRPchr4103149170Missense_MutationNAF1212Y0.24
KIRPchr4103120314Frame_Shift_DelnovelN2388Ifs*180.32
KIRPchr4103160648Missense_MutationNAE755K0.44
KIRPchr4103144598Frame_Shift_DelnovelE1627Nfs*70.15
LAMLchr4103161115Missense_MutationnovelT701I0.07
LAMLchr4103153203Missense_Mutationrs755920648Q1027H0.17
LGGchr4103145228Missense_MutationnovelK1560R0.21
LGGchr4103108862Missense_MutationnovelS2651C0.1
LGGchr4103132801Frame_Shift_InsnovelL2272Ffs*100.31
LGGchr4103159191Missense_MutationnovelT807I0.43
LGGchr4103141750Missense_MutationnovelK1821N0.06
LIHCchr41031983365'UTRnovel0.49
LIHCchr4103158382Missense_MutationNAK984I0.85
LIHCchr4103139791Missense_MutationNAR2068G0.68
LIHCchr4103132721Missense_MutationNAV2299E0.39
LIHCchr4103145121Nonsense_MutationnovelK1596*0.16
LIHCchr4103145298Missense_MutationNAI1537V0.28
LIHCchr4103144556SilentNAQ1640Q0.57
LIHCchr41031983495'UTRnovel0.32
LIHCchr4103140035Missense_MutationnovelK1986N0.37
LIHCchr4103144461Missense_MutationnovelQ1672R0.41
LIHCchr4103163487Missense_MutationNAD572Y0.23
LUADchr4103149404Missense_MutationNAQ1134L0.25
LUADchr4103161343Nonsense_MutationnovelE653*0.16
LUADchr4103146092Missense_MutationNAS1384G0.28
LUADchr4103106268Missense_MutationnovelW2687L0.33
LUADchr4103140038SilentnovelV1985V0.19
LUADchr4103180329SilentnovelT408T0.2
LUADchr4103140296Missense_MutationnovelQ1958P0.1
LUADchr4103120190Missense_MutationNAN2429K0.21
LUADchr4103195213SilentnovelL126L0.24
LUADchr4103195111Splice_Regionnovel0.09
LUADchr4103153095Missense_Mutationrs775291777I1063M0.1
LUADchr4103141009SilentnovelK1853K0.1
LUADchr4103139847Missense_MutationNAE2049G0.33
LUADchr4103138377Missense_MutationnovelL2093M0.14
LUADchr4103108838Missense_MutationnovelR2659L0.31
LUADchr4103160748Missense_MutationNAK721N0.13
LUADchr4103149404Missense_MutationNAQ1134L0.21
LUADchr4103110872Missense_MutationnovelK2560N0.09
LUADchr4103145110Missense_MutationnovelQ1599H0.6
LUADchr4103163203SilentNAK592K0.22
LUADchr4103144375Nonsense_MutationnovelE1701*0.23
LUADchr4103158326Missense_MutationnovelE1003Q0.29
LUADchr4103182789SilentnovelS312S0.16
LUADchr4103116657SilentnovelK2454K0.1
LUADchr4103116659Nonsense_MutationnovelK2454*0.11
LUADchr4103106235Missense_MutationnovelC2698F0.19
LUADchr4103149396Nonsense_MutationnovelQ1137*0.35
LUADchr41031061913'UTRnovel0.08
LUADchr4103146044Missense_MutationNAT1400A0.15
LUADchr4103145972Missense_MutationNAL1424V0.1
LUADchr4103161434Missense_MutationnovelQ622H0.19
LUADchr4103145668Missense_MutationnovelE1476V0.17
LUADchr4103180438Missense_MutationNAE372V0.13
LUADchr4103195206Missense_MutationNAV129L0.42
LUSCchr4103122917Missense_MutationnovelN2366I0.36
LUSCchr4103145111Missense_MutationnovelQ1599L0.24
LUSCchr4103145888Missense_MutationnovelE1452Q0.34
LUSCchr4103122891Missense_MutationnovelA2375T0.09
LUSCchr4103143340Missense_MutationNAD1738H0.34
LUSCchr4103141832Missense_MutationNAR1794T0.25
LUSCchr4103110917SilentNAL2545L0.16
LUSCchr4103158299Splice_SitenovelX1011_splice0.39
LUSCchr4103108902Missense_MutationNAE2638Q0.1
LUSCchr4103147422SilentNAT1356T0.12
LUSCchr4103123054Missense_MutationNAR2320S0.36
LUSCchr4103158825Missense_MutationnovelE888V0.25
LUSCchr4103161349Missense_MutationNAL651M0.12
LUSCchr4103141826Missense_MutationnovelI1796T0.28
LUSCchr4103133697Nonsense_MutationNAE2240*0.26
LUSCchr4103145913SilentnovelE1443E0.19
LUSCchr4103151275Missense_MutationnovelE1114Q0.14
LUSCchr4103160759Missense_MutationnovelL718M0.62
LUSCchr4103180357Missense_MutationnovelR399L0.09
LUSCchr4103133803Missense_MutationnovelK2204N0.14
LUSCchr4103180421Nonsense_MutationnovelQ378*0.16
LUSCchr4103163134Splice_Regionnovel0.26
LUSCchr4103174796Missense_MutationNAK529N0.84
LUSCchr4103116672SilentnovelG2449G0.25
LUSCchr4103153226Missense_MutationnovelD1020H0.4
LUSCchr4103160655SilentnovelL752L0.13
LUSCchr4103146023Nonsense_MutationNAE1407*0.2
LUSCchr4103140852Missense_Mutationrs767613874D1906Y0.13
LUSCchr4103160781Splice_SitenovelX711_splice0.45
LUSCchr4103140001Missense_MutationnovelE1998Q0.44
LUSCchr4103145127Missense_MutationNAE1594K0.2
LUSCchr4103182812Missense_MutationnovelI305V0.04
LUSCchr4103116612SilentnovelL2469L0.19
LUSCchr4103120297Missense_MutationnovelK2394E0.1
LUSCchr4103176993Missense_MutationnovelK432N0.32
LUSCchr4103144345Missense_MutationnovelE1711K0.45
OVchr4103116603Missense_MutationNAM2472I0.2
OVchr4103159224Frame_Shift_InsnovelE796Gfs*130.22
OVchr4103145596Frame_Shift_DelnovelN1499Ifs*150.07
OVchr4103136160Missense_MutationnovelR2168I0.11
OVchr4103108880Missense_MutationNAF2645S0.51
OVchr4103196765Missense_MutationnovelN48H0.07
OVchr4103133845SilentNAS2190S0.26
OVchr4103114500Silentrs202097843L2499L0.33
OVchr4103182857Nonsense_MutationNAR290*0.7
PAADchr4103120327Nonsense_Mutationrs267599968R2384*0.16
PAADchr4103153243Missense_MutationnovelG1014D0.13
PRADchr4103144481SilentNAT1665T0.19
PRADchr4103109065Missense_MutationNAE2583D0.07
PRADchr4103147491Silentrs745496238L1333L0.56
PRADchr4103120238SilentNAV2413V0.19
PRADchr4103122870Splice_SitenovelX2381_splice0.13
PRADchr4103108913Missense_MutationnovelP2634H0.38
READchr4103108929Missense_Mutationrs187303852R2629W0.39
READchr4103145844SilentNAK1466K0.34
READchr4103110949Missense_Mutationrs756483643G2535S0.31
READchr4103108940Missense_Mutationrs772361306Q2625R0.28
READchr4103147454Missense_MutationNAS1346A0.2
READchr4103108839Missense_Mutationrs774765853R2659C0.42
READchr4103149204Nonsense_MutationnovelE1201*0.37
READchr4103149270Missense_MutationnovelT1179A0.36
READchr4103151305Nonsense_MutationNAE1104*0.12
READchr4103158875Missense_MutationNAK871N0.45
READchr4103180403Missense_MutationnovelD384Y0.38
READchr4103123073Missense_MutationnovelS2314L0.04
READchr4103109000Missense_MutationnovelS2605Y0.09
READchr4103110884Missense_MutationNAI2556M0.32
SARCchr4103159234Missense_MutationnovelG793R0.17
SARCchr4103149396Missense_MutationnovelQ1137E0.33
SARCchr4103139903SilentnovelS2030S0.29
SARCchr4103140840Missense_MutationnovelE1910K0.48
SARCchr4103153216Missense_MutationnovelA1023D0.1
SARCchr4103163521SilentnovelK560K0.21
SKCMchr4103148865SilentnovelS1274S0.4
SKCMchr4103149200Missense_MutationNAR1202K0.22
SKCMchr4103114484Missense_MutationnovelR2504K0.19
SKCMchr4103158765Missense_MutationNAR908K0.34
SKCMchr4103158778Missense_MutationNAQ904K0.43
SKCMchr4103147446SilentnovelT1348T0.09
SKCMchr4103147447Missense_MutationnovelT1348I0.09
SKCMchr4103141860Missense_MutationNAE1785K0.41
SKCMchr4103159008Splice_SiteNAX867_splice0.29
SKCMchr4103138438Missense_MutationnovelN2072K0.25
SKCMchr4103196175Nonsense_MutationnovelQ76*0.36
SKCMchr4103122908Missense_Mutationrs780652836P2369L0.19
SKCMchr4103136229Missense_MutationNAP2145H0.28
SKCMchr4103140818Missense_MutationNAA1917V0.38
SKCMchr4103160671Missense_MutationNAS747L0.13
SKCMchr4103108805Missense_MutationNAP2670L0.5
SKCMchr4103158631Missense_MutationNAH953Y0.43
SKCMchr4103122933Missense_MutationNAP2361S0.58
SKCMchr4103140348Missense_MutationnovelD1941N0.26
SKCMchr4103132864SilentnovelF2251F0.4
SKCMchr4103140889Missense_MutationnovelN1893K0.95
SKCMchr4103158880Missense_MutationnovelY870H0.23
SKCMchr4103174873Missense_MutationNAR504C0.5
SKCMchr4103132895Missense_MutationNAE2241G0.32
SKCMchr4103148866Missense_Mutationrs779588591S1274F0.25
SKCMchr4103108839Missense_Mutationrs774765853R2659C0.79
SKCMchr4103108817Missense_MutationnovelL2666S0.53
SKCMchr4103195230Missense_MutationnovelP121S0.18
SKCMchr4103159056Missense_MutationNAK852I0.14
SKCMchr4103140032Frame_Shift_DelnovelD1988Mfs*40.29
SKCMchr4103146036SilentNAI1402I0.27
SKCMchr4103145094Missense_MutationnovelE1605K0.36
SKCMchr4103145136Missense_MutationNAE1591K0.31
SKCMchr4103144375Missense_Mutationrs772375325E1701K0.24
SKCMchr4103123064Missense_MutationnovelF2317C0.16
SKCMchr4103159153Missense_MutationNAQ820E0.33
SKCMchr4103108839Missense_Mutationrs774765853R2659C0.24
SKCMchr4103148845Missense_MutationnovelE1281A1
SKCMchr4103136171Missense_MutationNAM2164I0.43
SKCMchr4103145986Missense_Mutationrs756176401I1419T0.12
SKCMchr4103160682SilentNAV743V0.16
SKCMchr4103136291Silentrs777063765L2124L0.17
SKCMchr4103141853Missense_MutationNAQ1787R0.55
SKCMchr4103145968Missense_Mutationrs113334734G1425E0.24
SKCMchr4103145572Missense_MutationNAS1508L0.17
SKCMchr4103158873Missense_MutationNAT872I0.21
SKCMchr4103163530Silentrs575353274S557S0.44
SKCMchr4103176949Missense_MutationnovelT447I0.53
SKCMchr41031062153'UTRNA0.32
SKCMchr4103158673Missense_MutationnovelE939K0.24
SKCMchr4103163191Missense_MutationNAE596D0.44
SKCMchr4103144480Missense_MutationNAE1666K0.4
SKCMchr4103145656Missense_MutationnovelK1480R0.41
SKCMchr4103149168Missense_MutationnovelE1213K0.33
SKCMchr4103163531Missense_MutationnovelS557L0.4
SKCMchr4103158862Nonsense_MutationNAQ876*0.3
SKCMchr4103145835SilentNAV1469V0.42
STADchr4103158773SilentnovelT905T0.07
STADchr4103144567Missense_MutationNAN1637D0.3
STADchr4103108879Frame_Shift_DelnovelF2645Lfs*220.33
STADchr4103116665Missense_MutationnovelP2452S0.29
STADchr4103182840SilentNAS295S0.26
STADchr4103159035Missense_MutationNAS859L0.27
STADchr4103160746Missense_MutationNAI722S0.33
STADchr4103176900Splice_RegionNAE463E0.52
STADchr4103195209Missense_MutationNAR128C0.3
STADchr4103196250Missense_MutationNAR51C0.29
STADchr4103148898Frame_Shift_InsnovelQ1264Nfs*70.07
STADchr4103138429SilentNAV2075V0.04
STADchr4103159183Missense_MutationNAS810P0.08
STADchr4103180442Missense_MutationNAM371V0.08
STADchr4103185820SilentNAT245T0.09
STADchr4103133752SilentnovelV2221V0.17
STADchr4103145848Missense_MutationNAI1465T0.24
STADchr4103144531Missense_MutationnovelL1649M0.27
STADchr4103180365SilentnovelN396N0.07
STADchr4103144575Missense_MutationNAT1634I0.26
STADchr4103195226Missense_MutationnovelD122A0.16
STADchr4103145286Missense_MutationNAS1541G0.28
STADchr4103145901Silentrs114566933L1447L0.28
STADchr4103108888SilentNAS2642S0.13
STADchr4103158860Missense_MutationnovelQ876H0.1
STADchr4103183221SilentNAK271K0.22
STADchr4103146010Missense_MutationNAP1411H0.25
STADchr4103145253Nonsense_MutationnovelQ1552*0.32
THCAchr4103149280Frame_Shift_DelnovelE1175Dfs*210.07
UCECchr4103158427Missense_Mutationrs754690682A969V0.27
UCECchr4103160748SilentNAK721K0.31
UCECchr4103108839Missense_Mutationrs774765853R2659C0.3
UCECchr4103139871Missense_MutationNAR2041I0.33
UCECchr4103147635SilentNAL1285L0.25
UCECchr4103122953Missense_MutationnovelA2354V0.41
UCECchr4103133708Missense_MutationnovelD2236G0.38
UCECchr4103149350Missense_MutationnovelE1152G0.43
UCECchr4103159182Missense_Mutationrs779464384S810L0.37
UCECchr4103158433Missense_Mutationrs201196207R967Q0.29
UCECchr4103132818Nonsense_Mutationrs760219934E2267*0.12
UCECchr4103136353Missense_MutationNAL2104V0.38
UCECchr4103140381Missense_Mutationrs780081164R1930C0.31
UCECchr4103158628Missense_Mutationrs201814347D954N0.29
UCECchr4103194654Nonsense_MutationNAE170*0.32
UCECchr4103120230Missense_MutationnovelD2416G0.52
UCECchr4103158634Missense_MutationnovelI952V0.36
UCECchr4103114488Missense_MutationNAL2503I0.42
UCECchr4103136184Missense_MutationnovelQ2160L0.03
UCECchr4103139870SilentNAR2041R0.23
UCECchr4103183241Missense_MutationnovelL265V0.4
UCECchr4103148886SilentnovelN1267N0.48
UCECchr4103159182Missense_Mutationrs779464384S810L0.18
UCECchr4103109040Missense_MutationnovelL2592F0.2
UCECchr4103148915Missense_Mutationrs200458836V1258I0.37
UCECchr4103159121Missense_MutationnovelE830D0.58
UCECchr4103147453Missense_MutationnovelS1346Y0.22
UCECchr4103120289SilentNAS2396S0.12
UCECchr4103132711Missense_MutationNAF2302L0.18
UCECchr4103140381Missense_Mutationrs780081164R1930C0.27
UCECchr4103158853Missense_MutationNAT879A0.23
UCECchr4103196167SilentnovelY78Y0.05
UCECchr4103108889Missense_MutationNAS2642Y0.19
UCECchr4103140254Splice_SiteNAX1971_splice0.17
UCECchr4103145528Missense_MutationnovelN1523D0.35
UCECchr4103132806Missense_MutationNAF2271I0.39
UCECchr4103114528Nonsense_MutationnovelV2489_E2490insFSNGT*QT0.07
UCECchr4103114530Missense_MutationnovelV2489L0.01
UCECchr4103141062Missense_MutationNAK1836E0.27
UCECchr4103158850Missense_Mutationrs773744712R880C0.21
UCECchr4103158629SilentnovelH953H0.19
UCECchr4103174838Missense_MutationnovelE515D0.22
UCECchr4103159145Missense_MutationnovelF822L0.48
UCECchr4103132879Missense_MutationNAF2246L0.41
UCECchr4103145882Missense_MutationNAL1454I0.51
UCECchr4103158781Missense_MutationNAL903M0.47
UCECchr4103159035Missense_MutationNAS859L0.5
UCECchr4103163153Missense_MutationnovelD609G0.1
UCECchr4103141100Missense_MutationNAQ1823R0.48
UCECchr4103136175Missense_Mutationrs759827260S2163F0.41
UCECchr4103141766Missense_MutationnovelA1816V0.09
UCECchr4103132711Missense_MutationNAF2302L0.47
UCECchr4103136299Missense_MutationnovelL2122I0.29
UCECchr4103133719Missense_MutationnovelN2232K0.21
UCECchr4103139818Missense_MutationnovelI2059V0.3
UCECchr4103161235Missense_MutationnovelT661I0.33
UCECchr4103108867SilentnovelS2649S0.27
UCECchr4103147453Missense_MutationnovelS1346F0.34
UCECchr4103147599SilentnovelE1297E0.04
UCECchr4103174741Missense_MutationnovelQ548K0.39
UCECchr4103194616Missense_MutationnovelI182M0.34
UCECchr4103140299Missense_MutationnovelI1957T0.17
UCECchr4103145323Missense_MutationnovelI1528M0.39
UCECchr4103146036SilentNAI1402I0.34
UCECchr4103148916Silentrs751590849S1257S0.48
UCECchr4103138444SilentnovelR2070R0.25
UCECchr4103109071SilentnovelS2581S0.13
UCECchr4103144482Missense_Mutationrs781248304T1665M0.43
UCECchr4103147453Missense_MutationnovelS1346Y0.47
UCECchr4103145238Missense_Mutationrs749051815R1557C0.51
UCECchr4103151320Nonsense_MutationnovelE1099*0.49
UCECchr4103153167SilentnovelI1039I0.52
UCECchr4103158783Missense_MutationnovelT902M0.16
UCECchr4103174819Nonsense_MutationnovelE522*0.38
UCECchr4103114528Frame_Shift_InsnovelE2490Qfs*140.05
UCECchr4103149268Nonsense_MutationnovelT1179_E1180insSFQ*VYL*ET*KHI0.06
UCECchr4103158720In_Frame_InsnovelE922_E923insGNPLCNGLNFKLQQTLE0.04
UCECchr4103182834SilentnovelG297G0.47
UCECchr4103122873Nonsense_MutationnovelE2381*0.08
UCECchr4103140007Frame_Shift_DelNAI1996Lfs*70.41
UCECchr4103122888Missense_Mutationrs777495974T2376A0.49
UCECchr4103139911Missense_MutationnovelH2028N0.37
UCECchr4103140375Missense_MutationnovelL1932I0.5
UCECchr4103144363Missense_MutationnovelL1705F0.5
UCECchr4103145962Missense_MutationnovelS1427F0.27
UCECchr4103153122SilentnovelE1054E0.08
UCECchr4103175978SilentnovelA487A0.39
UCECchr4103182818Missense_Mutationrs115429647R303C0.25
UCECchr4103120287Missense_MutationnovelA2397V0.2
UCECchr4103138413Missense_MutationnovelL2081V0.13
UCECchr4103141905SilentnovelL1770L0.1
UCECchr4103145123Missense_MutationnovelM1595R0.19
UCECchr4103196250Missense_MutationNAR51C0.17
UCECchr4103109081Missense_MutationnovelQ2578R0.45
UCECchr4103147634Missense_MutationNAH1286Y0.54
UCECchr4103148916Silentrs751590849S1257S0.4
UCECchr4103180330Missense_Mutationrs778023977T408M0.31
UCECchr4103148915Missense_Mutationrs200458836V1258I0.29
UCECchr4103144482Missense_Mutationrs781248304T1665M0.23
UCECchr4103133883Missense_MutationNAS2178G0.11
UCECchr4103114528Frame_Shift_InsnovelE2490Lfs*390.05
UCECchr4103194653Missense_MutationnovelE170A0.5
UCECchr4103160693Missense_Mutationrs756823638R740W0.29
UCECchr4103174831Nonsense_MutationnovelR518*0.36
UCECchr4103159035Missense_MutationNAS859L0.22
UCECchr4103136199Missense_MutationnovelL2155R0.08
UCECchr4103151258SilentnovelC1119C0.1
UCECchr4103153128Missense_MutationnovelK1052N0.16
UCECchr4103139958Missense_MutationnovelS2012F0.34
UCECchr4103145902Missense_MutationnovelL1447P0.3
UCECchr4103183256Nonsense_MutationnovelR260*0.2
UCECchr4103109060Frame_Shift_InsnovelK2585Ifs*120.04
UCECchr4103109062Frame_Shift_InsnovelK2585Nfs*100.03
UCECchr4103181382In_Frame_InsnovelK346delinsNL0.05
UCECchr4103181383Nonsense_MutationnovelK346delinsISNYAILLDC*0.05
UCECchr4103132756Frame_Shift_InsnovelN2287Kfs*80.28
UCECchr4103145106Missense_MutationNAA1601T0.34
UCECchr4103196249Missense_MutationNAR51H0.24
UCECchr4103114528Frame_Shift_InsnovelE2490Ffs*380.08
UCECchr4103139836Frame_Shift_DelnovelM2053Wfs*70.37
UCECchr4103148945Nonsense_MutationnovelQ1248*0.17
UCECchr4103196817SilentnovelY30Y0.36
UCECchr4103143372Missense_MutationNAH1727R0.27
UCECchr4103133794Silentrs748139732E2207E0.35
UCECchr4103108839Missense_Mutationrs774765853R2659C0.35
UCECchr4103147480Missense_MutationNAF1337C0.07
UCECchr4103149215Missense_Mutationrs770112551S1197Y0.41
UCECchr4103195215Missense_MutationNAL126I0.34
UCECchr4103153166Nonsense_MutationnovelE1040*0.16
UCECchr4103145212SilentnovelQ1565Q0.11
UCECchr4103144464Missense_MutationNAT1671I0.37
UCECchr4103147480Missense_MutationNAF1337C0.31
UCECchr4103148956Missense_MutationNAL1244R0.35
UCECchr4103153144Missense_MutationNAS1047Y0.27
UCECchr4103114528Frame_Shift_InsnovelE2490Qfs*140.03
UCECchr4103141057Frame_Shift_DelNAD1838Mfs*150.44
UCECchr4103177017SilentNAC424C0.3
UCECchr4103195162SilentNAL143L0.25
UCECchr4103195999Frame_Shift_InsnovelT93Nfs*200.32
UCECchr4103122932Missense_MutationnovelP2361L0.36
UCECchr4103139844Missense_MutationnovelS2050Y0.42
UCECchr4103177034Nonsense_MutationnovelR419*0.31
UCECchr4103196187Missense_Mutationrs138076049D72N0.51
UCECchr4103106263Missense_MutationnovelA2689T0.43
UCECchr4103110972Missense_MutationnovelP2527L0.32
UCECchr4103136250Missense_MutationnovelV2138G0.22
UCECchr4103139848Nonsense_MutationnovelE2049*0.31
UCECchr4103161116Missense_MutationnovelT701A0.33
UCECchr4103174873Missense_MutationNAR504C0.38
UCECchr4103182843Missense_MutationnovelN294K0.48
UCECchr4103140007Frame_Shift_DelNAI1996Lfs*70.14
UCSchr4103139962Missense_MutationnovelL2011V0.33
UVMchr4103153171Missense_MutationnovelI1038T0.5
UVMchr4103141750Missense_MutationnovelK1821N0.6

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
LIHCDEL0.43247.0927e-07
LUADDEL0.19190.050802
MESODEL0.40230.075661

Survival Analysis
CancerP-value Q-value
THYM0.0059

Kaplan-Meier Survival Analysis

KIRC0.00014

Kaplan-Meier Survival Analysis

SARC0.0035

Kaplan-Meier Survival Analysis

MESO0.00018

Kaplan-Meier Survival Analysis

ACC0.0001

Kaplan-Meier Survival Analysis

PRAD0.023

Kaplan-Meier Survival Analysis

KIRP0.00011

Kaplan-Meier Survival Analysis

COAD0.026

Kaplan-Meier Survival Analysis

PAAD0.0001

Kaplan-Meier Survival Analysis

PCPG0.016

Kaplan-Meier Survival Analysis

KICH0.0029

Kaplan-Meier Survival Analysis

LIHC0.0001

Kaplan-Meier Survival Analysis

CHOL0.05

Kaplan-Meier Survival Analysis

LUAD0.0001

Kaplan-Meier Survival Analysis

UVM0.012

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000138778 (Gene tree)
Gene ID
1062
Gene Symbol
CENPE
Alias
KIF10|PPP1R61
Full Name
centromere protein E
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
92,604 bases
Position
chr4:103,105,806-103,198,409
Accession
1856
RBP type
non-canonical RBP
Summary
Centrosome-associated protein E (CENPE) is a kinesin-like motor protein that accumulates in the G2 phase of the cell cycle. Unlike other centrosome-associated proteins, it is not present during interphase and first appears at the centromere region of chromosomes during prometaphase. This protein is required for stable spindle microtubule capture at kinetochores which is a necessary step in chromosome alignment during prometaphase. This protein also couples chromosome position to microtubule depolymerizing activity. Alternative splicing results in multiple transcript variants encoding distinct protein isoforms. [provided by RefSeq, Nov 2014]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000514974CENPE-206581-ENSP00000426023183 (aa)-D6RHK2
ENST00000611174CENPE-2088260-ENSP000004835422664 (aa)-A0A087X0P0
ENST00000509823CENPE-205515--- (aa)--
ENST00000515478CENPE-207291--- (aa)--
ENST00000265148CENPE-2018612XM_011531544ENSP000002651482701 (aa)XP_011529846Q02224
ENST00000503705CENPE-2033468-ENSP000004239811126 (aa)-D6RBW0
ENST00000509120CENPE-204792--- (aa)--
ENST00000380026CENPE-2028241XM_011531547ENSP000003693652580 (aa)XP_011529849Q02224
Gene Model
Click here to download ENSG00000138778's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000138778Stroke9.9178495E-004-
ENSG00000138778C-Reactive Protein8.945e-00519060910
ENSG00000138778C-Reactive Protein4.701e-00519060910
ENSG00000138778C-Reactive Protein9.209e-00619060910
ENSG00000138778Platelet Function Tests1.0807500E-005-
ENSG00000138778Platelet Function Tests1.8164200E-005-
ENSG00000138778Platelet Function Tests2.4002800E-005-
ENSG00000138778Sex Hormone-Binding Globulin3.4020000E-005-
ENSG00000138778Sex Hormone-Binding Globulin3.4690000E-005-
ENSG00000138778Sex Hormone-Binding Globulin3.8210000E-005-
ENSG00000138778Testicular Neoplasms2E-1023666240
ENSG00000138778Testicular Neoplasms2E-719483681
ENSG00000138778Testicular Germ Cell Tumor6E-1225877299
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000138778rs27204604103133529ATesticular germ cell tumor25877299[NR]1.32EFO_1000566
ENSG00000138778rs27204604103133529ATesticular germ cell tumor23666240[1.12-1.36]1.24EFO_0005088
ENSG00000138778rs27204604103133529GTesticular germ cell tumor28604732[1.20-1.35]1.2820514EFO_1000566
ENSG00000138778rs131146294103111211?General cognitive ability29844566z-score decrease4.903EFO_0004337
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000138778's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000138778CENPE10073.233ENSMUSG00000045328Cenpe10069.884Mus_musculus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000278mitotic cell cycle24748105.IMPProcess
GO:0000775chromosome, centromeric region2022189.11084331.26321640.IDAComponent
GO:0000776kinetochore9763420.11682612.12925705.25395579.25918224.IDAComponent
GO:0000777condensed chromosome kinetochore-IEAComponent
GO:0000779condensed chromosome, centromeric region19465021.IDAComponent
GO:0003777microtubule motor activity21873635.IBAFunction
GO:0003777microtubule motor activity25908662.IDAFunction
GO:0003777microtubule motor activity7889940.IMPFunction
GO:0005515protein binding9763420.17535814.25918224.26321640.IPIFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus9763420.IMPComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005694chromosome2022189.IDAComponent
GO:0005828kinetochore microtubule25908662.IDAComponent
GO:0005829cytosol-IDAComponent
GO:0005829cytosol-TASComponent
GO:0005871kinesin complex21873635.IBAComponent
GO:0005874microtubule21873635.IBAComponent
GO:0005874microtubule7889940.IDAComponent
GO:0006890retrograde vesicle-mediated transport, Golgi to ER-TASProcess
GO:0007018microtubule-based movement21873635.IBAProcess
GO:0007018microtubule-based movement-TASProcess
GO:0007052mitotic spindle organization25908662.IMPProcess
GO:0007059chromosome segregation24748105.IMPProcess
GO:0007079mitotic chromosome movement towards spindle pole25908662.IDAProcess
GO:0007080mitotic metaphase plate congression21873635.IBAProcess
GO:0007080mitotic metaphase plate congression15843429.IMPProcess
GO:0007275multicellular organism development-IEAProcess
GO:0008017microtubule binding21873635.IBAFunction
GO:0008017microtubule binding25908662.IDAFunction
GO:0015630microtubule cytoskeleton-IDAComponent
GO:0016020membrane19946888.HDAComponent
GO:0016887ATPase activity21873635.IBAFunction
GO:0019886antigen processing and presentation of exogenous peptide antigen via MHC class II-TASProcess
GO:0030071regulation of mitotic metaphase/anaphase transition2022189.IMPProcess
GO:0030496midbody2022189.9763420.IDAComponent
GO:0043515kinetochore binding9763420.IDAFunction
GO:0045860positive regulation of protein kinase activity12925705.IMPProcess
GO:0051233spindle midzone9763420.IDAComponent
GO:0051301cell division-IEAProcess
GO:0051310metaphase plate congression23891108.25395579.25743205.25908662.IMPProcess
GO:0051315attachment of mitotic spindle microtubules to kinetochore15843429.IMPProcess
GO:0051382kinetochore assembly9763420.IDAProcess
GO:0099606microtubule plus-end directed mitotic chromosome migration25908662.IDAProcess
GO:0099607lateral attachment of mitotic spindle microtubules to kinetochore23891108.IMPProcess
GO:1990023mitotic spindle midzone2022189.IDAComponent
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