EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1231226697Intronnovel0.3
BLCAchr12312241133'UTRnovel0.29
BLCAchr1231229160Missense_MutationNAN167I0.09
BLCAchr1231224386Missense_MutationnovelI259V0.27
BLCAchr12312242653'UTRnovel0.58
BLCAchr1231238951Missense_MutationnovelS119Y0.35
BLCAchr1231241139Translation_Start_SitenovelM1?0.25
BRCAchr1231226605Intronnovel0.11
BRCAchr1231241120Missense_Mutationrs552479895D8N0.21
CESCchr1231238833IntronNA0.41
CESCchr1231225266Intronnovel0.23
CESCchr1231241125Missense_Mutationrs531305779S6L0.33
CESCchr1231241031Nonsense_MutationnovelY37*0.06
CESCchr1231226594Intronnovel0.43
CESCchr1231238673Intronnovel0.45
COADchr1231224475Intronnovel0.1
COADchr12312241503'UTRnovel0.29
COADchr1231225471Missense_MutationNAR249M0.26
COADchr1231226767Frame_Shift_DelnovelK222Rfs*550.25
COADchr1231239031SilentNAK92K0.36
COADchr12312242113'UTRrs5747689430.6
COADchr1231238801Intronnovel0.1
COADchr1231224534Intronnovel0.38
COADchr1231224383Missense_MutationNAL260V0.33
COADchr1231226605Intronnovel0.33
GBMchr1231238977Missense_MutationnovelE110D0.16
HNSCchr12312242593'UTRrs7562583970.31
HNSCchr1231241083Missense_Mutationrs751437541S20F0.1
HNSCchr1231238756Intronnovel0.38
LGGchr1231238795Intronnovel0.67
LGGchr1231227007Missense_MutationnovelL191P0.32
LIHCchr1231241102Nonsense_MutationnovelE14*0.06
LIHCchr1231224503Intronnovel0.27
LIHCchr1231224378SilentNAS261S0.06
LUADchr1231224494Intronnovel0.15
LUADchr12312411585'UTRnovel0.52
LUADchr1231226796Missense_MutationnovelK212N0.06
LUADchr1231226750Missense_MutationNAE228K0.12
LUADchr1231239122Missense_MutationNAV62A0.07
LUSCchr1231225498Missense_MutationnovelK240I0.07
LUSCchr1231229166Missense_MutationNAE165G0.35
LUSCchr1231238974SilentNAI111I0.35
LUSCchr1231239014Missense_MutationnovelR98L0.1
LUSCchr1231226700Intronnovel0.08
OVchr12312241963'UTRnovel0.9
OVchr1231229176Missense_MutationNAD162H0.14
OVchr12312241753'UTRnovel0.13
OVchr12312411495'UTRnovel0.23
PAADchr1231224474Intronnovel0.16
PRADchr1231227064Missense_Mutationrs542541652R172H0.13
PRADchr12312241403'UTRnovel0.55
READchr1231239044Missense_Mutationrs772202745S88L0.45
READchr1231239154SilentNAI51I0.31
SARCchr12312411655'UTRnovel0.47
SKCMchr1231226991SilentnovelA196A0.3
SKCMchr12312242583'UTRnovel0.19
SKCMchr12312241973'UTRnovel0.32
SKCMchr1231238973Missense_MutationnovelL112F0.45
SKCMchr1231224462Intronnovel0.2
SKCMchr1231224370Missense_Mutationrs562480633R264Q0.2
SKCMchr1231238948Missense_Mutationrs779405167S120F0.61
SKCMchr1231226756Missense_MutationnovelE226K0.35
SKCMchr1231226757SilentnovelK225K0.34
SKCMchr1231225511Missense_MutationnovelD236N0.14
SKCMchr12312411655'UTRnovel0.26
SKCMchr12312411655'UTRnovel0.11
SKCMchr1231224391Missense_MutationnovelP257L0.21
SKCMchr1231227023Nonsense_MutationNAG186*0.21
SKCMchr12312411675'UTRnovel0.58
SKCMchr1231238820Intronnovel0.72
SKCMchr1231226824Missense_MutationnovelP203L0.77
SKCMchr12312411655'UTRnovel0.31
SKCMchr1231226745SilentnovelK229K0.3
STADchr1231238855Splice_SitenovelX150_splice0.18
STADchr1231238857Frame_Shift_DelnovelK150Tfs*30.18
STADchr1231226767Frame_Shift_DelnovelK222Rfs*550.29
STADchr1231226722Intronnovel0.31
STADchr1231239043Silentrs745640167S88S0.27
STADchr1231226758Missense_MutationNAK225T0.27
STADchr1231227049Missense_Mutationrs34759016R177Q0.28
STADchr1231226815Frame_Shift_DelnovelK206Rfs*40.24
STADchr1231226767Frame_Shift_DelnovelK222Rfs*550.28
UCECchr1231241049SilentnovelA31A0.5
UCECchr1231224412Missense_MutationNAK250R0.37
UCECchr1231229149Splice_SiteNAX170_splice0.24
UCECchr1231239043Silentrs745640167S88S0.27
UCECchr12312242753'UTRnovel0.37
UCECchr1231241071Missense_Mutationrs762716272S24I0.07
UCECchr1231238735Intronnovel0.46
UCECchr1231225362Intronnovel0.29
UCECchr1231226750Nonsense_MutationNAE228*0.41
UCECchr1231226601Intronnovel0.23
UCECchr1231238877Missense_MutationNAD144Y0.22
UCECchr12312240223'UTRnovel0.5
UCECchr1231238690Intronnovel0.12
UCECchr1231224298Missense_MutationNAS288Y0.31
UCECchr1231224298Missense_MutationNAS288Y0.06
UCECchr1231224298Missense_MutationNAS288Y0.33
UCECchr12312240493'UTRnovel0.21
UCECchr1231226821Missense_MutationnovelP204H0.16
UCECchr1231226979Silentrs139640765G200G0.23
UCECchr1231225365Intronnovel0.31
UCECchr1231238983SilentnovelG108G0.27
UCECchr12312242173'UTRnovel0.25
UCECchr1231225440Intronnovel0.37
UCECchr1231224475Intronnovel0.11
UCECchr1231238657Intronnovel0.6
UCECchr1231239043Silentrs745640167S88S0.2
UCECchr1231238777Intronnovel0.41
UCECchr1231226787Missense_MutationnovelQ215H0.06
UCECchr1231224432Intronnovel0.45
UCECchr1231224298Missense_MutationNAS288Y0.79
UCECchr1231225273Intronnovel0.12
UCECchr1231239056Missense_MutationnovelR84M0.16
UCECchr12312242123'UTRnovel0.21
UCECchr1231238830Intronrs3752642070.22

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCADEL0.08090.033566
DLBCDEL0.1250.0017831
KIRCDEL0.06630.018371
LGGDEL0.03310.11599
LIHCAMP0.65954.3428e-09
PCPGDEL0.09880.12617
PRADDEL0.07930.00015401
READAMP0.24850.14328
SARCDEL0.29962.6086e-08
TGCTDEL0.02670.16985
THYMAMP0.1870.24554
UCECAMP0.37292.3921e-06

Survival Analysis
CancerP-value Q-value
KIRC0.00011

Kaplan-Meier Survival Analysis

MESO0.048

Kaplan-Meier Survival Analysis

ACC0.00012

Kaplan-Meier Survival Analysis

SKCM0.028

Kaplan-Meier Survival Analysis

LUSC0.0091

Kaplan-Meier Survival Analysis

KIRP0.0064

Kaplan-Meier Survival Analysis

BLCA0.0041

Kaplan-Meier Survival Analysis

LAML0.023

Kaplan-Meier Survival Analysis

LIHC0.0025

Kaplan-Meier Survival Analysis

LGG0.00015

Kaplan-Meier Survival Analysis

OV0.011

Kaplan-Meier Survival Analysis

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000143633 (Gene tree)
Gene ID
128061
Gene Symbol
C1orf131
Alias
DKFZp547B1713
Full Name
chromosome 1 open reading frame 131
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
17,425 bases
Position
chr1:231,223,763-231,241,187
Accession
25332
RBP type
non-canonical RBP
Summary
(Chromosome 1 Open Reading Frame 131) is a Protein Coding gene.
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000495795C1orf131-208596--- (aa)--
ENST00000366651C1orf131-2031432-ENSP00000355611292 (aa)-Q8NDD1
ENST00000318906C1orf131-2012483-ENSP00000321341249 (aa)-Q5TBH9
ENST00000366649C1orf131-2021424-ENSP00000355609293 (aa)-Q8NDD1
ENST00000471936C1orf131-2062657--- (aa)--
ENST00000486384C1orf131-207400--- (aa)--
ENST00000451322C1orf131-204795-ENSP00000401677256 (aa)-Q5TBI2
ENST00000462669C1orf131-205552--- (aa)--
Gene Model
Click here to download ENSG00000143633's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000143633Insulin Resistance5.75142448693303E-717903298
ENSG00000143633Cholesterol, LDL3.46080088153306E-1517903299
ENSG00000143633Cholesterol, LDL1.91341966746395E-1317903299
ENSG00000143633Platelet Function Tests1.8228800E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000143633's network
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005694chromosome20813266.IDAComponent
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