EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr2702816143'UTRnovel0.15
BRCAchr2702936965'UTRnovel0.27
BRCAchr270288075Missense_MutationnovelG58E0.04LSM
BRCAchr270289360Missense_MutationNAK15N0.36LSM
BRCAchr270293647Translation_Start_SiteNAM1?0.35
CESCchr270292759Intronnovel0.23
CHOLchr270281677Missense_MutationnovelR63Q0.06
COADchr270288102Missense_Mutationrs753363451A49V0.26LSM
GBMchr2702815583'UTRnovel0.09
HNSCchr2702936515'UTRrs7759548210.2
HNSCchr2702937295'UTRnovel0.06
HNSCchr2702936625'UTRrs3728748880.41
LIHCchr270293433Intronnovel0.43
LUADchr270281681Missense_MutationnovelI62V0.38
LUSCchr2702936915'UTRrs3704737030.13
LUSCchr2702815773'UTRnovel0.45
PAADchr2702815933'UTRrs3776531100.23
PRADchr270293635Missense_MutationnovelH5Q0.22
PRADchr2702936805'UTRnovel0.12
READchr270281664SilentNAI67I0.38
SKCMchr270288186Frame_Shift_DelnovelL21*0.09LSM
STADchr2702936545'UTRnovel0.27
STADchr270293640Missense_MutationNAA4S0.1
STADchr2702936865'UTRrs5404020950.4
UCECchr270292838Intronnovel0.1
UCECchr270288071Missense_MutationnovelM59I0.44LSM
UCECchr270292747Intronnovel0.3
UCECchr270292881Intronnovel0.17
UCECchr2702814193'UTRnovel0.43
UCECchr270288102Missense_Mutationrs753363451A49V0.4LSM
UCECchr270293636Missense_MutationNAH5R0.07
UCECchr2702816113'UTRnovel0.08
UCECchr2702815543'UTRnovel0.14
UCECchr270288157SilentNAL31L0.33
UCECchr2702816193'UTRnovel0.36

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
KIRPDEL0.02430.08832
PAADDEL0.04890.2014
READDEL0.06670.19022

Survival Analysis
CancerP-value Q-value
KIRC0.00012

Kaplan-Meier Survival Analysis

ACC0.00011

Kaplan-Meier Survival Analysis

HNSC0.0039

Kaplan-Meier Survival Analysis

LUSC0.0043

Kaplan-Meier Survival Analysis

ESCA0.0048

Kaplan-Meier Survival Analysis

KIRP0.03

Kaplan-Meier Survival Analysis

COAD0.02

Kaplan-Meier Survival Analysis

PAAD0.0042

Kaplan-Meier Survival Analysis

BLCA0.015

Kaplan-Meier Survival Analysis

LAML0.023

Kaplan-Meier Survival Analysis

KICH0.025

Kaplan-Meier Survival Analysis

LIHC0.00088

Kaplan-Meier Survival Analysis

LGG0.0016

Kaplan-Meier Survival Analysis

LUAD0.0064

Kaplan-Meier Survival Analysis

UVM0.00012

Kaplan-Meier Survival Analysis

OV0.037

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000143977 (Gene tree)
Gene ID
6637
Gene Symbol
SNRPG
Alias
Sm-G
Full Name
small nuclear ribonucleoprotein polypeptide G
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
12,410 bases
Position
chr2:70,281,362-70,293,771
Accession
11163
RBP type
canonical RBP
Summary
The protein encoded by this gene is a component of the U1, U2, U4, and U5 small nuclear ribonucleoprotein complexes, precursors of the spliceosome. The encoded protein may also be a part of the U7 small nuclear ribonucleoprotein complex, which participates in the processing of the 3' end of histone transcripts. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000272348LSMPF01423.224.2e-2211
ENSP00000416334LSMPF01423.222.2e-2011
ENSP00000391403LSMPF01423.226.4e-2011
ENSP00000402194LSMPF01423.226.4e-2011
ENSP00000441332LSMPF01423.226.4e-2011
ENSP00000393388LSMPF01423.224.4e-1511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
27417296Structure-function analysis and genetic interactions of the SmG, SmE, and SmF subunits of the yeast Sm protein ring.RNA2016 SepSchwer Bdoi: 10.1261/rna.057448.116
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000413456SNRPG-202398-ENSP0000041633468 (aa)-F5H013
ENST00000429728SNRPG-203566--- (aa)--
ENST00000449935SNRPG-205428-ENSP0000039140364 (aa)-Q49AN9
ENST00000454893SNRPG-206527XM_017004774ENSP0000039338896 (aa)XP_016860263C9JVQ0
ENST00000488400SNRPG-209393--- (aa)--
ENST00000482975SNRPG-2081093-ENSP0000044133264 (aa)-Q49AN9
ENST00000480370SNRPG-207487--- (aa)--
ENST00000438261SNRPG-204515-ENSP0000040219464 (aa)-Q49AN9
ENST00000272348SNRPG-201625-ENSP0000027234876 (aa)-P62308
Gene Model
Click here to download ENSG00000143977's gene model file
Pathways
Pathway IDPathway NameSource
hsa03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000143977's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000143977SNRPG9139.394ENSG00000130332LSM76936.620
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000143977SNRPG10090.789ENSAPOG00000009068snrpg10090.789Acanthochromis_polyacanthus
ENSG00000143977SNRPG9782.258ENSAPOG00000013277snrpg9772.000Acanthochromis_polyacanthus
ENSG00000143977SNRPG100100.000ENSAMEG00000016000SNRPG100100.000Ailuropoda_melanoleuca
ENSG00000143977SNRPG10068.750ENSACIG00000006560snrpg9466.176Amphilophus_citrinellus
ENSG00000143977SNRPG10090.789ENSAOCG00000006447snrpg10090.789Amphiprion_ocellaris
ENSG00000143977SNRPG10090.789ENSAPEG00000017249snrpg10090.789Amphiprion_percula
ENSG00000143977SNRPG10090.789ENSATEG00000023229snrpg10090.789Anabas_testudineus
ENSG00000143977SNRPG7795.918ENSAPLG00000003951-8973.611Anas_platyrhynchos
ENSG00000143977SNRPG10096.875ENSACAG00000007878SNRPG10085.526Anolis_carolinensis
ENSG00000143977SNRPG10078.947ENSANAG00000020869-9878.947Aotus_nancymaae
ENSG00000143977SNRPG10098.438ENSANAG00000005705-10097.368Aotus_nancymaae
ENSG00000143977SNRPG9598.361ENSANAG00000017661-7792.647Aotus_nancymaae
ENSG00000143977SNRPG10095.312ENSANAG00000019989-10095.312Aotus_nancymaae
ENSG00000143977SNRPG10096.875ENSANAG00000036971-9697.101Aotus_nancymaae
ENSG00000143977SNRPG10095.312ENSANAG00000019847-10095.312Aotus_nancymaae
ENSG00000143977SNRPG10092.188ENSANAG00000023461-9990.411Aotus_nancymaae
ENSG00000143977SNRPG10096.053ENSANAG00000006710-10096.053Aotus_nancymaae
ENSG00000143977SNRPG10096.053ENSANAG00000019432-10096.053Aotus_nancymaae
ENSG00000143977SNRPG100100.000ENSANAG00000028737SNRPG100100.000Aotus_nancymaae
ENSG00000143977SNRPG10097.368ENSANAG00000019882-10097.368Aotus_nancymaae
ENSG00000143977SNRPG10090.789ENSACLG00000006323snrpg10090.789Astatotilapia_calliptera
ENSG00000143977SNRPG10090.789ENSAMXG00000030568snrpg10090.789Astyanax_mexicanus
ENSG00000143977SNRPG10089.474ENSBTAG00000053210SNRPG10089.474Bos_taurus
ENSG00000143977SNRPG10093.750ENSBTAG00000050695-10093.750Bos_taurus
ENSG00000143977SNRPG10098.438ENSBTAG00000049132-9995.890Bos_taurus
ENSG00000143977SNRPG10095.312ENSBTAG00000014104-10095.312Bos_taurus
ENSG00000143977SNRPG100100.000ENSBTAG00000034506-100100.000Bos_taurus
ENSG00000143977SNRPG10098.684ENSBTAG00000038368-10098.684Bos_taurus
ENSG00000143977SNRPG10094.737ENSCJAG00000045138-10094.737Callithrix_jacchus
ENSG00000143977SNRPG10098.701ENSCJAG00000019624-10098.701Callithrix_jacchus
ENSG00000143977SNRPG10093.750ENSCJAG00000046709-10093.750Callithrix_jacchus
ENSG00000143977SNRPG100100.000ENSCJAG00000019313SNRPG100100.000Callithrix_jacchus
ENSG00000143977SNRPG10097.368ENSCJAG00000040628-10097.368Callithrix_jacchus
ENSG00000143977SNRPG10098.684ENSCJAG00000022419-10098.684Callithrix_jacchus
ENSG00000143977SNRPG10096.053ENSCJAG00000042327-10096.053Callithrix_jacchus
ENSG00000143977SNRPG100100.000ENSCAFG00000032595SNRPG100100.000Canis_familiaris
ENSG00000143977SNRPG10093.750ENSCAFG00020007381-8494.118Canis_lupus_dingo
ENSG00000143977SNRPG100100.000ENSCAFG00020001862-100100.000Canis_lupus_dingo
ENSG00000143977SNRPG8390.566ENSCAFG00020023429-9483.333Canis_lupus_dingo
ENSG00000143977SNRPG10065.789ENSCHIG00000022682-10065.789Capra_hircus
ENSG00000143977SNRPG10095.312ENSCHIG00000009012-10094.737Capra_hircus
ENSG00000143977SNRPG10098.438ENSCHIG00000012507-10097.368Capra_hircus
ENSG00000143977SNRPG10096.875ENSCHIG00000002486-10096.053Capra_hircus
ENSG00000143977SNRPG10068.831ENSCHIG00000014762-8068.831Capra_hircus
ENSG00000143977SNRPG9783.784ENSTSYG00000005729-10083.784Carlito_syrichta
ENSG00000143977SNRPG100100.000ENSTSYG00000034550SNRPG100100.000Carlito_syrichta
ENSG00000143977SNRPG9595.082ENSTSYG00000026369-9795.082Carlito_syrichta
ENSG00000143977SNRPG89100.000ENSCAPG00000002047-100100.000Cavia_aperea
ENSG00000143977SNRPG100100.000ENSCPOG00000036891-100100.000Cavia_porcellus
ENSG00000143977SNRPG100100.000ENSCCAG00000030474SNRPG100100.000Cebus_capucinus
ENSG00000143977SNRPG9772.973ENSCATG00000000492-10072.973Cercocebus_atys
ENSG00000143977SNRPG9598.361ENSCATG00000030279-9098.361Cercocebus_atys
ENSG00000143977SNRPG100100.000ENSCATG00000020914SNRPG100100.000Cercocebus_atys
ENSG00000143977SNRPG9593.443ENSCATG00000016774-10088.235Cercocebus_atys
ENSG00000143977SNRPG9777.027ENSCATG00000044172-10077.027Cercocebus_atys
ENSG00000143977SNRPG100100.000ENSCATG00000031023-9998.630Cercocebus_atys
ENSG00000143977SNRPG100100.000ENSCLAG00000012216-100100.000Chinchilla_lanigera
ENSG00000143977SNRPG10098.684ENSCSAG00000000372-10098.684Chlorocebus_sabaeus
ENSG00000143977SNRPG100100.000ENSCSAG00000015147-100100.000Chlorocebus_sabaeus
ENSG00000143977SNRPG100100.000ENSCHOG00000000130-100100.000Choloepus_hoffmanni
ENSG00000143977SNRPG10096.053ENSCPBG00000003642SNRPG10096.053Chrysemys_picta_bellii
ENSG00000143977SNRPG100100.000ENSCANG00000008822SNRPG100100.000Colobus_angolensis_palliatus
ENSG00000143977SNRPG10080.263ENSCANG00000027827-10080.263Colobus_angolensis_palliatus
ENSG00000143977SNRPG10076.316ENSCANG00000032309-10076.316Colobus_angolensis_palliatus
ENSG00000143977SNRPG100100.000ENSCGRG00001011831-100100.000Cricetulus_griseus_chok1gshd
ENSG00000143977SNRPG10092.188ENSCGRG00001013591-10089.855Cricetulus_griseus_chok1gshd
ENSG00000143977SNRPG10086.842ENSCGRG00001011009-10086.842Cricetulus_griseus_chok1gshd
ENSG00000143977SNRPG10096.875ENSCGRG00001010645-10096.053Cricetulus_griseus_chok1gshd
ENSG00000143977SNRPG10088.158ENSCGRG00001000446-10088.158Cricetulus_griseus_chok1gshd
ENSG00000143977SNRPG10082.895ENSCGRG00001013878-10082.895Cricetulus_griseus_chok1gshd
ENSG00000143977SNRPG10073.438ENSCGRG00001012757-10071.053Cricetulus_griseus_chok1gshd
ENSG00000143977SNRPG10086.842ENSCGRG00000000133-10086.842Cricetulus_griseus_crigri
ENSG00000143977SNRPG10092.188ENSCGRG00000011028-10089.855Cricetulus_griseus_crigri
ENSG00000143977SNRPG10082.895ENSCGRG00000008511-10082.895Cricetulus_griseus_crigri
ENSG00000143977SNRPG100100.000ENSCGRG00000002261Snrpg100100.000Cricetulus_griseus_crigri
ENSG00000143977SNRPG9483.333ENSCSEG00000003401snrpg10070.588Cynoglossus_semilaevis
ENSG00000143977SNRPG10090.789ENSCVAG00000012770snrpg10090.789Cyprinodon_variegatus
ENSG00000143977SNRPG10089.474ENSDARG00000099667snrpg10089.474Danio_rerio
ENSG00000143977SNRPG9568.056ENSDNOG00000045718-9572.222Dasypus_novemcinctus
ENSG00000143977SNRPG100100.000ENSDNOG00000019446-100100.000Dasypus_novemcinctus
ENSG00000143977SNRPG100100.000ENSDORG00000023335-100100.000Dipodomys_ordii
ENSG00000143977SNRPG100100.000ENSDORG00000005623-96100.000Dipodomys_ordii
ENSG00000143977SNRPG10089.062ENSDORG00000030093-10089.062Dipodomys_ordii
ENSG00000143977SNRPG10072.368FBgn0261791SNRPG10072.368Drosophila_melanogaster
ENSG00000143977SNRPG99100.000ENSETEG00000010028-100100.000Echinops_telfairi
ENSG00000143977SNRPG10079.688ENSEASG00005011820-10079.688Equus_asinus_asinus
ENSG00000143977SNRPG10089.062ENSEASG00005008384-10087.143Equus_asinus_asinus
ENSG00000143977SNRPG10077.778ENSEASG00005007399SNRPG8277.778Equus_asinus_asinus
ENSG00000143977SNRPG10077.778ENSECAG00000019989SNRPG8277.778Equus_caballus
ENSG00000143977SNRPG10079.688ENSECAG00000038646-10079.688Equus_caballus
ENSG00000143977SNRPG10089.062ENSECAG00000001370-10087.143Equus_caballus
ENSG00000143977SNRPG9798.649ENSEEUG00000006991-10098.649Erinaceus_europaeus
ENSG00000143977SNRPG10098.438ENSEEUG00000001932-10098.462Erinaceus_europaeus
ENSG00000143977SNRPG10088.158ENSELUG00000013944snrpg10088.158Esox_lucius
ENSG00000143977SNRPG9567.213ENSFCAG00000008118-10064.286Felis_catus
ENSG00000143977SNRPG10080.882ENSFCAG00000028363-10080.882Felis_catus
ENSG00000143977SNRPG10078.125ENSFCAG00000035486-9878.082Felis_catus
ENSG00000143977SNRPG100100.000ENSFCAG00000045921-100100.000Felis_catus
ENSG00000143977SNRPG10097.368ENSFCAG00000024033-10097.368Felis_catus
ENSG00000143977SNRPG10096.875ENSFALG00000008384SNRPG10091.429Ficedula_albicollis
ENSG00000143977SNRPG100100.000ENSFDAG00000012567-100100.000Fukomys_damarensis
ENSG00000143977SNRPG10082.895ENSFDAG00000009371-10082.895Fukomys_damarensis
ENSG00000143977SNRPG10090.789ENSFDAG00000005075-8390.789Fukomys_damarensis
ENSG00000143977SNRPG10089.474ENSFHEG00000012063snrpg10089.474Fundulus_heteroclitus
ENSG00000143977SNRPG5595.238ENSGMOG00000006239snrpg10095.238Gadus_morhua
ENSG00000143977SNRPG10097.368ENSGALG00000028409SNRPG10097.368Gallus_gallus
ENSG00000143977SNRPG10090.789ENSGAFG00000000100snrpg10090.789Gambusia_affinis
ENSG00000143977SNRPG5795.349ENSGACG00000013201snrpg10095.349Gasterosteus_aculeatus
ENSG00000143977SNRPG10096.053ENSGAGG00000007536SNRPG10096.053Gopherus_agassizii
ENSG00000143977SNRPG9791.935ENSGGOG00000040381-10089.552Gorilla_gorilla
ENSG00000143977SNRPG9588.525ENSGGOG00000022169-9588.525Gorilla_gorilla
ENSG00000143977SNRPG100100.000ENSGGOG00000039645SNRPG100100.000Gorilla_gorilla
ENSG00000143977SNRPG9774.324ENSGGOG00000036975-10074.324Gorilla_gorilla
ENSG00000143977SNRPG10089.474ENSGGOG00000036639-10089.474Gorilla_gorilla
ENSG00000143977SNRPG10090.789ENSHBUG00000006405snrpg10090.789Haplochromis_burtoni
ENSG00000143977SNRPG100100.000ENSHGLG00000005767SNRPG100100.000Heterocephalus_glaber_female
ENSG00000143977SNRPG10087.500ENSHGLG00000018568-9688.889Heterocephalus_glaber_female
ENSG00000143977SNRPG10096.875ENSHGLG00000004152-9695.588Heterocephalus_glaber_female
ENSG00000143977SNRPG100100.000ENSHGLG00100000851SNRPG100100.000Heterocephalus_glaber_male
ENSG00000143977SNRPG9781.081ENSHGLG00100000974-10081.081Heterocephalus_glaber_male
ENSG00000143977SNRPG10089.474ENSHCOG00000014878snrpg10089.474Hippocampus_comes
ENSG00000143977SNRPG10085.526ENSIPUG00000006885snrpg10085.526Ictalurus_punctatus
ENSG00000143977SNRPG10092.188ENSSTOG00000011041-10092.105Ictidomys_tridecemlineatus
ENSG00000143977SNRPG10081.250ENSSTOG00000029967-10076.316Ictidomys_tridecemlineatus
ENSG00000143977SNRPG100100.000ENSSTOG00000008654-100100.000Ictidomys_tridecemlineatus
ENSG00000143977SNRPG9893.651ENSSTOG00000019596-9793.651Ictidomys_tridecemlineatus
ENSG00000143977SNRPG10094.737ENSJJAG00000014502-10094.737Jaculus_jaculus
ENSG00000143977SNRPG10091.026ENSJJAG00000009736-10091.026Jaculus_jaculus
ENSG00000143977SNRPG10095.312ENSJJAG00000012999-5794.286Jaculus_jaculus
ENSG00000143977SNRPG10078.947ENSJJAG00000022665-10078.947Jaculus_jaculus
ENSG00000143977SNRPG10088.158ENSJJAG00000011161-10088.158Jaculus_jaculus
ENSG00000143977SNRPG10098.684ENSJJAG00000006327-10098.684Jaculus_jaculus
ENSG00000143977SNRPG10079.688ENSJJAG00000016975-9380.882Jaculus_jaculus
ENSG00000143977SNRPG8288.710ENSJJAG00000004224-10088.710Jaculus_jaculus
ENSG00000143977SNRPG100100.000ENSJJAG00000015198-100100.000Jaculus_jaculus
ENSG00000143977SNRPG10090.789ENSKMAG00000005677snrpg10090.789Kryptolebias_marmoratus
ENSG00000143977SNRPG10086.842ENSLBEG00000016516snrpg10086.842Labrus_bergylta
ENSG00000143977SNRPG10093.421ENSLACG00000017900SNRPG10093.421Latimeria_chalumnae
ENSG00000143977SNRPG10093.421ENSLOCG00000015662snrpg10093.421Lepisosteus_oculatus
ENSG00000143977SNRPG100100.000ENSLAFG00000002301SNRPG100100.000Loxodonta_africana
ENSG00000143977SNRPG10088.158ENSMFAG00000043682-10088.158Macaca_fascicularis
ENSG00000143977SNRPG100100.000ENSMFAG00000041083SNRPG100100.000Macaca_fascicularis
ENSG00000143977SNRPG10098.684ENSMFAG00000027665-10098.684Macaca_fascicularis
ENSG00000143977SNRPG10096.053ENSMFAG00000013877-10096.053Macaca_fascicularis
ENSG00000143977SNRPG9777.027ENSMFAG00000001179-10077.027Macaca_fascicularis
ENSG00000143977SNRPG10098.438ENSMMUG00000030176-10097.368Macaca_mulatta
ENSG00000143977SNRPG10094.737ENSMMUG00000031635-10094.737Macaca_mulatta
ENSG00000143977SNRPG9777.027ENSMMUG00000047159-10077.027Macaca_mulatta
ENSG00000143977SNRPG10098.684ENSMMUG00000032514-10098.684Macaca_mulatta
ENSG00000143977SNRPG100100.000ENSMMUG00000007961SNRPG100100.000Macaca_mulatta
ENSG00000143977SNRPG100100.000ENSMNEG00000028209SNRPG100100.000Macaca_nemestrina
ENSG00000143977SNRPG10076.316ENSMNEG00000030947-10076.316Macaca_nemestrina
ENSG00000143977SNRPG10076.316ENSMNEG00000045190-10076.316Macaca_nemestrina
ENSG00000143977SNRPG10093.750ENSMNEG00000014068-9993.151Macaca_nemestrina
ENSG00000143977SNRPG100100.000ENSMLEG00000031343SNRPG100100.000Mandrillus_leucophaeus
ENSG00000143977SNRPG9791.935ENSMLEG00000028511-10087.143Mandrillus_leucophaeus
ENSG00000143977SNRPG100100.000ENSMLEG00000034222-9998.630Mandrillus_leucophaeus
ENSG00000143977SNRPG10096.053ENSMLEG00000000797-10096.053Mandrillus_leucophaeus
ENSG00000143977SNRPG100100.000ENSMLEG00000030697-9998.630Mandrillus_leucophaeus
ENSG00000143977SNRPG10084.375ENSMLEG00000036207-8584.375Mandrillus_leucophaeus
ENSG00000143977SNRPG10090.789ENSMAMG00000016077snrpg10090.789Mastacembelus_armatus
ENSG00000143977SNRPG10090.789ENSMZEG00005022235snrpg10090.789Maylandia_zebra
ENSG00000143977SNRPG100100.000ENSMAUG00000020530-100100.000Mesocricetus_auratus
ENSG00000143977SNRPG10093.750ENSMICG00000005503-10091.429Microcebus_murinus
ENSG00000143977SNRPG10081.579ENSMICG00000036425-10081.579Microcebus_murinus
ENSG00000143977SNRPG9771.622ENSMICG00000032669-10071.622Microcebus_murinus
ENSG00000143977SNRPG9972.000ENSMICG00000033993-10072.000Microcebus_murinus
ENSG00000143977SNRPG100100.000ENSMICG00000015369-10098.684Microcebus_murinus
ENSG00000143977SNRPG10065.625ENSMOCG00000014126-10060.526Microtus_ochrogaster
ENSG00000143977SNRPG100100.000ENSMOCG00000014309-100100.000Microtus_ochrogaster
ENSG00000143977SNRPG10075.000ENSMMOG00000017624snrpg10075.000Mola_mola
ENSG00000143977SNRPG10097.368ENSMODG00000011528SNRPG10097.368Monodelphis_domestica
ENSG00000143977SNRPG7777.551ENSMALG00000006421-8377.551Monopterus_albus
ENSG00000143977SNRPG9186.207ENSMALG00000002114snrpg8186.207Monopterus_albus
ENSG00000143977SNRPG100100.000ENSMUSG00000057278Snrpg100100.000Mus_musculus
ENSG00000143977SNRPG100100.000MGP_PahariEiJ_G0022330Snrpg100100.000Mus_pahari
ENSG00000143977SNRPG10094.737MGP_SPRETEiJ_G0020637-10094.737Mus_spretus
ENSG00000143977SNRPG100100.000MGP_SPRETEiJ_G0029604-100100.000Mus_spretus
ENSG00000143977SNRPG10098.684ENSMPUG00000019200-10098.684Mustela_putorius_furo
ENSG00000143977SNRPG100100.000ENSMPUG00000007221-100100.000Mustela_putorius_furo
ENSG00000143977SNRPG10096.875ENSMPUG00000018774-10096.053Mustela_putorius_furo
ENSG00000143977SNRPG10097.368ENSMLUG00000024983-10097.368Myotis_lucifugus
ENSG00000143977SNRPG10098.684ENSMLUG00000026490-10098.684Myotis_lucifugus
ENSG00000143977SNRPG10098.438ENSMLUG00000025938-10097.368Myotis_lucifugus
ENSG00000143977SNRPG100100.000ENSNGAG00000020309-100100.000Nannospalax_galili
ENSG00000143977SNRPG10081.579ENSNBRG00000008674snrpg10081.579Neolamprologus_brichardi
ENSG00000143977SNRPG10076.316ENSNLEG00000029162-10076.316Nomascus_leucogenys
ENSG00000143977SNRPG10090.625ENSNLEG00000031314-10090.625Nomascus_leucogenys
ENSG00000143977SNRPG9795.161ENSNLEG00000027426-10092.647Nomascus_leucogenys
ENSG00000143977SNRPG10071.053ENSNLEG00000036278-10071.053Nomascus_leucogenys
ENSG00000143977SNRPG100100.000ENSNLEG00000010182SNRPG100100.000Nomascus_leucogenys
ENSG00000143977SNRPG10090.625ENSNLEG00000030825-9691.176Nomascus_leucogenys
ENSG00000143977SNRPG7593.750ENSMEUG00000005457-10093.878Notamacropus_eugenii
ENSG00000143977SNRPG9998.667ENSOPRG00000001093-10098.667Ochotona_princeps
ENSG00000143977SNRPG100100.000ENSODEG00000011198-100100.000Octodon_degus
ENSG00000143977SNRPG10098.684ENSOCUG00000011214-10098.684Oryctolagus_cuniculus
ENSG00000143977SNRPG10096.053ENSOCUG00000012284-10096.053Oryctolagus_cuniculus
ENSG00000143977SNRPG10090.789ENSORLG00000025456snrpg10090.789Oryzias_latipes
ENSG00000143977SNRPG10088.158ENSORLG00020020500snrpg10088.158Oryzias_latipes_hni
ENSG00000143977SNRPG10090.789ENSORLG00015015013snrpg10090.789Oryzias_latipes_hsok
ENSG00000143977SNRPG10090.789ENSOMEG00000010583snrpg10090.789Oryzias_melastigma
ENSG00000143977SNRPG9790.323ENSOGAG00000015300-10089.189Otolemur_garnettii
ENSG00000143977SNRPG10096.875ENSOARG00000006020-10096.053Ovis_aries
ENSG00000143977SNRPG100100.000ENSOARG00000019701-100100.000Ovis_aries
ENSG00000143977SNRPG10098.684ENSOARG00000000211-10098.684Ovis_aries
ENSG00000143977SNRPG10096.053ENSOARG00000017484-10096.053Ovis_aries
ENSG00000143977SNRPG10092.105ENSPPAG00000037542-10092.105Pan_paniscus
ENSG00000143977SNRPG9795.161ENSPPAG00000043268-10092.647Pan_paniscus
ENSG00000143977SNRPG100100.000ENSPPAG00000029464SNRPG100100.000Pan_paniscus
ENSG00000143977SNRPG10096.053ENSPPRG00000021536-10096.053Panthera_pardus
ENSG00000143977SNRPG10081.250ENSPPRG00000007431-10080.882Panthera_pardus
ENSG00000143977SNRPG10095.312ENSPPRG00000015709-10094.737Panthera_pardus
ENSG00000143977SNRPG10079.688ENSPPRG00000009976-10075.714Panthera_pardus
ENSG00000143977SNRPG100100.000ENSPPRG00000011894-100100.000Panthera_pardus
ENSG00000143977SNRPG100100.000ENSPTIG00000016786-100100.000Panthera_tigris_altaica
ENSG00000143977SNRPG10096.053ENSPTIG00000002303-10096.053Panthera_tigris_altaica
ENSG00000143977SNRPG10084.211ENSPTIG00000003291-10084.211Panthera_tigris_altaica
ENSG00000143977SNRPG100100.000ENSPTRG00000012029SNRPG100100.000Pan_troglodytes
ENSG00000143977SNRPG9791.935ENSPTRG00000041856-10089.706Pan_troglodytes
ENSG00000143977SNRPG10090.789ENSPTRG00000042762-10090.789Pan_troglodytes
ENSG00000143977SNRPG10096.053ENSPANG00000033303-10096.053Papio_anubis
ENSG00000143977SNRPG9791.935ENSPANG00000032445-10087.143Papio_anubis
ENSG00000143977SNRPG100100.000ENSPANG00000029931SNRPG100100.000Papio_anubis
ENSG00000143977SNRPG9777.027ENSPANG00000030725-10077.027Papio_anubis
ENSG00000143977SNRPG10090.789ENSPKIG00000015072snrpg10090.789Paramormyrops_kingsleyae
ENSG00000143977SNRPG10078.947ENSPMGG00000012549snrpg10078.947Periophthalmus_magnuspinnatus
ENSG00000143977SNRPG10082.895ENSPEMG00000014690-10082.895Peromyscus_maniculatus_bairdii
ENSG00000143977SNRPG10084.211ENSPMAG00000000033snrpg10084.211Petromyzon_marinus
ENSG00000143977SNRPG10096.875ENSPCIG00000022813-9696.923Phascolarctos_cinereus
ENSG00000143977SNRPG10085.938ENSPCIG00000017076-9685.075Phascolarctos_cinereus
ENSG00000143977SNRPG10090.789ENSPFOG00000016200snrpg10090.789Poecilia_formosa
ENSG00000143977SNRPG10090.789ENSPLAG00000007294snrpg10090.789Poecilia_latipinna
ENSG00000143977SNRPG10090.789ENSPMEG00000018925snrpg10090.789Poecilia_mexicana
ENSG00000143977SNRPG10087.013ENSPREG00000005370snrpg10087.013Poecilia_reticulata
ENSG00000143977SNRPG100100.000ENSPPYG00000012324-100100.000Pongo_abelii
ENSG00000143977SNRPG9796.774ENSPPYG00000009646-10094.595Pongo_abelii
ENSG00000143977SNRPG10075.000ENSPCOG00000021128-10075.000Propithecus_coquereli
ENSG00000143977SNRPG9777.027ENSPCOG00000015976-10077.027Propithecus_coquereli
ENSG00000143977SNRPG9797.297ENSPCOG00000003538-10097.297Propithecus_coquereli
ENSG00000143977SNRPG100100.000ENSPCOG00000024442-9998.630Propithecus_coquereli
ENSG00000143977SNRPG100100.000ENSPVAG00000004855-100100.000Pteropus_vampyrus
ENSG00000143977SNRPG10090.789ENSPNYG00000008962snrpg10090.789Pundamilia_nyererei
ENSG00000143977SNRPG10090.789ENSPNAG00000022455snrpg10090.789Pygocentrus_nattereri
ENSG00000143977SNRPG100100.000ENSRNOG00000016507LOC687679100100.000Rattus_norvegicus
ENSG00000143977SNRPG9984.000ENSRNOG00000058521AABR07042226.19984.000Rattus_norvegicus
ENSG00000143977SNRPG100100.000ENSRNOG00000032232Snrpg100100.000Rattus_norvegicus
ENSG00000143977SNRPG100100.000ENSRBIG00000026802-9998.630Rhinopithecus_bieti
ENSG00000143977SNRPG10096.875ENSRBIG00000036899-10096.875Rhinopithecus_bieti
ENSG00000143977SNRPG100100.000ENSRBIG00000039564-100100.000Rhinopithecus_bieti
ENSG00000143977SNRPG10096.875ENSRBIG00000030046-10091.667Rhinopithecus_bieti
ENSG00000143977SNRPG100100.000ENSRROG00000032968-9998.630Rhinopithecus_roxellana
ENSG00000143977SNRPG10095.312ENSRROG00000045277-10090.278Rhinopithecus_roxellana
ENSG00000143977SNRPG10082.895ENSRROG00000034265-9689.062Rhinopithecus_roxellana
ENSG00000143977SNRPG100100.000ENSRROG00000045586-100100.000Rhinopithecus_roxellana
ENSG00000143977SNRPG100100.000ENSRROG00000037134-9998.630Rhinopithecus_roxellana
ENSG00000143977SNRPG9593.443ENSRROG00000029552-10088.235Rhinopithecus_roxellana
ENSG00000143977SNRPG10088.158ENSSBOG00000020739-10088.158Saimiri_boliviensis_boliviensis
ENSG00000143977SNRPG10085.938ENSSBOG00000026763-9983.562Saimiri_boliviensis_boliviensis
ENSG00000143977SNRPG10082.895ENSSBOG00000028922-10082.895Saimiri_boliviensis_boliviensis
ENSG00000143977SNRPG10090.625ENSSBOG00000022826-7488.060Saimiri_boliviensis_boliviensis
ENSG00000143977SNRPG10092.105ENSSBOG00000022793-10092.105Saimiri_boliviensis_boliviensis
ENSG00000143977SNRPG10097.368ENSSBOG00000004446-7897.368Saimiri_boliviensis_boliviensis
ENSG00000143977SNRPG100100.000ENSSBOG00000023307SNRPG100100.000Saimiri_boliviensis_boliviensis
ENSG00000143977SNRPG10097.368ENSSHAG00000012395SNRPG10097.368Sarcophilus_harrisii
ENSG00000143977SNRPG10089.474ENSSFOG00015019030snrpg10089.474Scleropages_formosus
ENSG00000143977SNRPG10089.474ENSSMAG00000001167snrpg10089.474Scophthalmus_maximus
ENSG00000143977SNRPG10090.789ENSSDUG00000014103snrpg10090.789Seriola_dumerili
ENSG00000143977SNRPG10090.789ENSSLDG00000015482snrpg10090.789Seriola_lalandi_dorsalis
ENSG00000143977SNRPG10097.368ENSSPUG00000008514SNRPG10097.368Sphenodon_punctatus
ENSG00000143977SNRPG7082.222ENSSPAG00000008300snrpg7582.222Stegastes_partitus
ENSG00000143977SNRPG100100.000ENSSSCG00000024776-100100.000Sus_scrofa
ENSG00000143977SNRPG10086.842ENSTGUG00000004149SNRPG10086.842Taeniopygia_guttata
ENSG00000143977SNRPG9283.051ENSTRUG00000004040snrpg10073.750Takifugu_rubripes
ENSG00000143977SNRPG10089.474ENSTNIG00000003506snrpg10089.474Tetraodon_nigroviridis
ENSG00000143977SNRPG9879.688ENSTBEG00000000061-10078.667Tupaia_belangeri
ENSG00000143977SNRPG10094.737ENSTBEG00000017381-10094.737Tupaia_belangeri
ENSG00000143977SNRPG100100.000ENSTTRG00000001197-100100.000Tursiops_truncatus
ENSG00000143977SNRPG8088.235ENSUAMG00000008324-6082.540Ursus_americanus
ENSG00000143977SNRPG9767.568ENSUAMG00000020319-10067.568Ursus_americanus
ENSG00000143977SNRPG100100.000ENSUAMG00000025835-100100.000Ursus_americanus
ENSG00000143977SNRPG100100.000ENSUMAG00000021476-100100.000Ursus_maritimus
ENSG00000143977SNRPG9768.919ENSUMAG00000016465-10068.919Ursus_maritimus
ENSG00000143977SNRPG7785.714ENSUMAG00000005603-9167.045Ursus_maritimus
ENSG00000143977SNRPG7978.333ENSUMAG00000003604-5978.333Ursus_maritimus
ENSG00000143977SNRPG100100.000ENSVPAG00000007452-100100.000Vicugna_pacos
ENSG00000143977SNRPG64100.000ENSVPAG00000007454-100100.000Vicugna_pacos
ENSG00000143977SNRPG100100.000ENSVVUG00000019343-100100.000Vulpes_vulpes
ENSG00000143977SNRPG9796.774ENSVVUG00000000415-10096.774Vulpes_vulpes
ENSG00000143977SNRPG7892.000ENSVVUG00000005535-9184.127Vulpes_vulpes
ENSG00000143977SNRPG100100.000ENSVVUG00000002858-100100.000Vulpes_vulpes
ENSG00000143977SNRPG100100.000ENSVVUG00000000890-96100.000Vulpes_vulpes
ENSG00000143977SNRPG10090.789ENSXETG00000008512snrpg10090.789Xenopus_tropicalis
ENSG00000143977SNRPG10083.750ENSXCOG00000000088snrpg10083.750Xiphophorus_couchianus
ENSG00000143977SNRPG10090.789ENSXMAG00000004353snrpg10090.789Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000245spliceosomal complex assembly7744013.NASProcess
GO:0000387spliceosomal snRNP assembly18984161.IDAProcess
GO:0000387spliceosomal snRNP assembly-TASProcess
GO:0000398mRNA splicing, via spliceosome11991638.ICProcess
GO:0000398mRNA splicing, via spliceosome28076346.IDAProcess
GO:0000398mRNA splicing, via spliceosome-TASProcess
GO:0003723RNA binding22658674.HDAFunction
GO:0005515protein binding9417867.12165861.14603251.16189514.18984161.25416956.30021884.IPIFunction
GO:0005634nucleus28076346.IDAComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005681spliceosomal complex7744013.TASComponent
GO:0005682U5 snRNP21873635.IBAComponent
GO:0005683U7 snRNP11574479.IDAComponent
GO:0005685U1 snRNP21873635.IBAComponent
GO:0005685U1 snRNP21113136.25555158.IDAComponent
GO:0005686U2 snRNP21873635.IBAComponent
GO:0005687U4 snRNP21873635.IBAComponent
GO:0005687U4 snRNP21516107.IDAComponent
GO:0005689U12-type spliceosomal complex21873635.IBAComponent
GO:0005689U12-type spliceosomal complex15146077.IDAComponent
GO:0005829cytosol18984161.IDAComponent
GO:0005829cytosol-TASComponent
GO:0006369termination of RNA polymerase II transcription-TASProcess
GO:0008334histone mRNA metabolic process-TASProcess
GO:0008380RNA splicing7744013.TASProcess
GO:0030532small nuclear ribonucleoprotein complex7744013.NASComponent
GO:0034709methylosome18984161.IDAComponent
GO:0034719SMN-Sm protein complex21873635.IBAComponent
GO:0034719SMN-Sm protein complex18984161.IDAComponent
GO:0043186P granule21873635.IBAComponent
GO:0046540U4/U6 x U5 tri-snRNP complex26912367.IDAComponent
GO:0051170import into nucleus-TASProcess
GO:0071004U2-type prespliceosome21873635.IBAComponent
GO:0071005U2-type precatalytic spliceosome28781166.IDAComponent
GO:0071007U2-type catalytic step 2 spliceosome28076346.IDAComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome11991638.IDAComponent
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