EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
ACC	chr10	50814013	Silent	novel	G397G	0.34
BLCA	chr10	50841869	Missense_Mutation	NA	E120K	0.28
BLCA	chr10	50859858	Missense_Mutation	NA	G28A	0.24
BLCA	chr10	50836119	Missense_Mutation	novel	E187K	0.07	DND1_DSRM
BLCA	chr10	50810018	Silent	NA	L503L	0.31
BLCA	chr10	50813960	Missense_Mutation	NA	G415E	0.32
BLCA	chr10	50811086	Silent	novel	L480L	0.17
BRCA	chr10	50850688	Intron	novel		0.08
BRCA	chr10	50813906	Frame_Shift_Del	novel	*P433Qfs2**	0.11
BRCA	chr10	50836177	Silent	NA	I167I	0.17
BRCA	chr10	50828193	Missense_Mutation	NA	R236I	0.57
BRCA	chr10	50836094	Missense_Mutation	rs748398755	A195V	0.35	DND1_DSRM
BRCA	chr10	50813932	Missense_Mutation	novel	D424E	0.39
BRCA	chr10	50836295	Missense_Mutation	NA	G128E	0.17
BRCA	chr10	50836181	Missense_Mutation	novel	V166D	0.06	DND1_DSRM
BRCA	chr10	50841872	Missense_Mutation	NA	Y119N	0.33
BRCA	chr10	50850788	Intron	novel		0.26
CESC	chr10	50820643	Frame_Shift_Ins	novel	*V259Efs5**	0.14
CESC	chr10	50820645	Silent	novel	A258A	0.14
CESC	chr10	50806874	Missense_Mutation	novel	A547D	0.13
CESC	chr10	50859865	Missense_Mutation	novel	R26C	0.21
CESC	chr10	50816084	Missense_Mutation	novel	A355S	0.31
CESC	chr10	50828165	Missense_Mutation	NA	E245D	0.34
CESC	chr10	50841892	Missense_Mutation	NA	A112G	0.5
CHOL	chr10	50841980	Missense_Mutation	novel	Y83H	0.43
COAD	chr10	50820623	Nonsense_Mutation	rs772118222	R266*	0.18
COAD	chr10	50859890	Missense_Mutation	rs754321707	E17D	0.26
COAD	chr10	50836227	Nonsense_Mutation	novel	E151*	0.07	DND1_DSRM
COAD	chr10	50809940	Silent	rs777970091	G529G	0.21
COAD	chr10	50806852	Silent	NA	P554P	0.2
COAD	chr10	50836216	Silent	rs76706180	S154S	0.3
COAD	chr10	50813865	Missense_Mutation	rs190691295	A447T	0.08
COAD	chr10	50813922	Missense_Mutation	NA	G428R	0.11
COAD	chr10	50850762	Intron	NA		0.11
COAD	chr10	50850673	Intron	NA		0.12
COAD	chr10	50809981	Missense_Mutation	rs765124661	E516K	0.1
COAD	chr10	50816109	Silent	NA	V346V	0.11
COAD	chr10	50811140	Nonsense_Mutation	novel	Q462*	0.33
COAD	chr10	50859857	Silent	novel	G28G	0.17
COAD	chr10	50814027	Frame_Shift_Ins	novel	*V393Cfs32**	0.04
COAD	chr10	50814028	Frame_Shift_Ins	novel	*V393Ffs3**	0.04
COAD	chr10	50841989	Missense_Mutation	novel	G80S	0.3
GBM	chr10	50828150	Missense_Mutation	NA	E250D	0.53
GBM	chr10	50806820	Missense_Mutation	NA	T565N	0.1
GBM	chr10	50806771	Silent	novel	T581T	0.44
GBM	chr10	50810012	Silent	novel	A505A	0.34
GBM	chr10	50836304	Missense_Mutation	rs148254279	R125H	0.62
GBM	chr10	50806661	3'UTR	novel		0.43
GBM	chr10	50828170	Missense_Mutation	novel	E244Q	0.1
GBM	chr10	50828202	Missense_Mutation	novel	L233R	0.09
HNSC	chr10	50859879	Missense_Mutation	rs761190953	R21H	0.36
HNSC	chr10	50806833	Missense_Mutation	novel	K561E	0.25
HNSC	chr10	50816253	Silent	novel	V298V	0.3
HNSC	chr10	50836138	Silent	novel	G180G	0.33
HNSC	chr10	50806661	3'UTR	novel		0.25
HNSC	chr10	50836215	Missense_Mutation	novel	E155K	0.06	DND1_DSRM
HNSC	chr10	50816187	Silent	novel	G320G	0.18
HNSC	chr10	50811097	Missense_Mutation	novel	R476T	0.19
HNSC	chr10	50813951	Frame_Shift_Ins	novel	*R418Kfs7**	0.16
HNSC	chr10	50836094	Missense_Mutation	rs748398755	A195V	0.4	DND1_DSRM
HNSC	chr10	50844097	Missense_Mutation	novel	G42V	0.16
HNSC	chr10	50813992	Nonsense_Mutation	novel	Y404*	0.76
HNSC	chr10	50816217	Silent	novel	V310V	0.28
KIRC	chr10	50820551	Splice_Site	novel	X289_splice	0.26
KIRC	chr10	50806853	Missense_Mutation	NA	P554L	0.19
KIRC	chr10	50841986	Nonsense_Mutation	NA	K81*	0.3
LGG	chr10	50813889	Silent	novel	L439L	0.14
LGG	chr10	50816207	Nonsense_Mutation	NA	R314*	0.5
LGG	chr10	50806799	Missense_Mutation	novel	A572E	0.38
LGG	chr10	50841937	Missense_Mutation	novel	G97E	0.32
LGG	chr10	50816051	Nonsense_Mutation	novel	G366*	0.06
LGG	chr10	50836241	Frame_Shift_Ins	novel	*T146Nfs16**	0.31	DND1_DSRM
LIHC	chr10	50828179	Missense_Mutation	novel	S241P	0.32
LIHC	chr10	50813898	Missense_Mutation	NA	P436S	0.34
LIHC	chr10	50844027	Silent	NA	R65R	0.42
LIHC	chr10	50841903	Missense_Mutation	novel	E108D	0.39
LIHC	chr10	50816047	Missense_Mutation	NA	H367R	0.29
LUAD	chr10	50806765	Silent	novel	A583A	0.16
LUAD	chr10	50813888	Frame_Shift_Del	novel	L439*	0.15
LUAD	chr10	50836094	Missense_Mutation	rs748398755	A195V	0.06	DND1_DSRM
LUAD	chr10	50806732	Missense_Mutation	novel	F594L	0.26
LUAD	chr10	50816058	Silent	NA	A363A	0.31
LUAD	chr10	50841977	Nonsense_Mutation	novel	E84*	0.19
LUAD	chr10	50816058	Silent	NA	A363A	0.27
LUAD	chr10	50809983	Missense_Mutation	novel	A515G	0.31
LUAD	chr10	50806684	3'UTR	novel		0.2
LUAD	chr10	50850799	Intron	novel		0.21
LUAD	chr10	50836128	Missense_Mutation	NA	V184L	0.1	DND1_DSRM
LUAD	chr10	50816037	Frame_Shift_Ins	novel	*N370Kfs11**	0.32
LUAD	chr10	50859878	Silent	rs371584214	R21R	0.05
LUAD	chr10	50841895	Missense_Mutation	novel	N111T	0.19
LUAD	chr10	50850808	Intron	novel		0.36
LUAD	chr10	50844011	Nonsense_Mutation	novel	E71*	0.42
LUAD	chr10	50850788	Intron	novel		0.24
LUAD	chr10	50841973	Missense_Mutation	NA	M85K	0.36
LUAD	chr10	50816096	Frame_Shift_Del	novel	*Q351Rfs34**	0.22
LUAD	chr10	50836091	Missense_Mutation	novel	R196M	0.09	DND1_DSRM
LUSC	chr10	50859913	Missense_Mutation	rs769626580	G10R	0.38
LUSC	chr10	50820614	Missense_Mutation	novel	A269P	0.09
LUSC	chr10	50806822	Silent	novel	V564V	0.09
LUSC	chr10	50850735	Intron	novel		0.29
LUSC	chr10	50836088	Missense_Mutation	novel	R197M	0.28	DND1_DSRM
LUSC	chr10	50850790	Intron	novel		0.34
LUSC	chr10	50806754	Missense_Mutation	rs530902814	R587Q	0.22
LUSC	chr10	50811052	Missense_Mutation	novel	Q491R	0.27
LUSC	chr10	50806737	Missense_Mutation	novel	T593S	0.22
LUSC	chr10	50809969	Missense_Mutation	novel	Q520K	0.38
LUSC	chr10	50850760	Intron	novel		0.24
LUSC	chr10	50828140	Missense_Mutation	NA	I254F	0.09
LUSC	chr10	50836097	Missense_Mutation	novel	M194T	0.17	DND1_DSRM
LUSC	chr10	50828282	Missense_Mutation	novel	L206F	0.19
LUSC	chr10	50841933	Nonsense_Mutation	novel	Y98*	0.22
LUSC	chr10	50816094	Missense_Mutation	novel	Q351H	0.17
LUSC	chr10	50850790	Intron	novel		0.37
LUSC	chr10	50836205	Missense_Mutation	novel	K158T	0.42	DND1_DSRM
LUSC	chr10	50816177	Missense_Mutation	novel	Q324K	0.38
LUSC	chr10	50813898	Missense_Mutation	NA	P436S	0.24
LUSC	chr10	50836169	Missense_Mutation	novel	P170R	0.53	DND1_DSRM
LUSC	chr10	50816151	Silent	novel	G332G	0.62
LUSC	chr10	50836117	Missense_Mutation	novel	E187D	0.22	DND1_DSRM
OV	chr10	50810009	In_Frame_Ins	novel	F506delinsLNHRN	0.04
OV	chr10	50850797	Intron	novel		0.26
OV	chr10	50859864	Missense_Mutation	rs529819396	R26H	0.42
OV	chr10	50828236	Missense_Mutation	NA	V222L	0.19
OV	chr10	50813983	Silent	NA	L407L	0.39
OV	chr10	50806805	Frame_Shift_Del	novel	*L570Sfs7**	0.23
OV	chr10	50820562	Frame_Shift_Del	novel	L286*	0.29
OV	chr10	50806681	3'UTR	novel		0.93
PAAD	chr10	50806693	3'UTR	novel		0.18
PRAD	chr10	50844036	Frame_Shift_Del	novel	*K62Nfs24**	0.32
PRAD	chr10	50836073	Splice_Site	NA	X202_splice	0.35
PRAD	chr10	50836094	Missense_Mutation	rs748398755	A195V	0.25	DND1_DSRM
PRAD	chr10	50813961	Missense_Mutation	novel	G415R	0.3
PRAD	chr10	50836283	Missense_Mutation	NA	S132N	0.49
PRAD	chr10	50859878	Silent	rs371584214	R21R	0.52
PRAD	chr10	50813897	Missense_Mutation	novel	P436H	0.15
PRAD	chr10	50828208	Missense_Mutation	novel	K231R	0.07
PRAD	chr10	50836164	Missense_Mutation	rs775569138	A172T	0.36	DND1_DSRM
READ	chr10	50809900	In_Frame_Ins	novel	A540_A542dup	0.31
READ	chr10	50850679	Intron	novel		0.42
SARC	chr10	50828295	Missense_Mutation	novel	G202E	0.6
SARC	chr10	50813898	Missense_Mutation	novel	P436T	0.27
SKCM	chr10	50859881	Silent	rs764493898	L20L	0.21
SKCM	chr10	50816141	Missense_Mutation	rs574044306	D336N	0.22
SKCM	chr10	50809981	Missense_Mutation	rs765124661	E516K	0.8
SKCM	chr10	50841959	Missense_Mutation	NA	D90N	0.22
SKCM	chr10	50814018	Silent	novel	L396L	0.53
SKCM	chr10	50813920	Silent	novel	G428G	0.08
SKCM	chr10	50828295	Missense_Mutation	novel	G202E	0.33
SKCM	chr10	50859858	Missense_Mutation	NA	G28E	0.23
SKCM	chr10	50844032	Missense_Mutation	NA	P64S	0.25
SKCM	chr10	50850784	Intron	NA		0.49
SKCM	chr10	50844053	Missense_Mutation	NA	E57K	0.53
SKCM	chr10	50816035	Missense_Mutation	rs781105145	R371K	0.24
SKCM	chr10	50813898	Missense_Mutation	NA	P436S	0.2
SKCM	chr10	50816064	Silent	NA	F361F	0.4
SKCM	chr10	50820590	Missense_Mutation	novel	E277K	0.4
SKCM	chr10	50820636	Silent	NA	R261R	0.15
SKCM	chr10	50828210	Silent	NA	V230V	0.25
SKCM	chr10	50836213	Silent	NA	E155E	0.19
SKCM	chr10	50836302	Missense_Mutation	NA	L126F	0.38
SKCM	chr10	50859892	Missense_Mutation	NA	E17K	0.36
SKCM	chr10	50806625	3'UTR	novel		0.36
SKCM	chr10	50820623	Nonsense_Mutation	rs772118222	R266*	0.83
SKCM	chr10	50828204	Silent	rs143315865	I232I	0.94
SKCM	chr10	50836234	Silent	NA	K148K	0.88
SKCM	chr10	50816064	Silent	NA	F361F	0.24
SKCM	chr10	50813859	Nonsense_Mutation	novel	Q449*	0.27
SKCM	chr10	50813860	Silent	novel	P448P	0.27
SKCM	chr10	50806624	3'UTR	novel		0.4
SKCM	chr10	50816018	Missense_Mutation	NA	P377S	0.31
SKCM	chr10	50828228	Missense_Mutation	NA	E224D	0.37
SKCM	chr10	50828277	Missense_Mutation	novel	G208E	0.36
SKCM	chr10	50813975	Missense_Mutation	NA	G410E	0.27
SKCM	chr10	50806730	Silent	NA	*595*	0.25
SKCM	chr10	50816174	Missense_Mutation	NA	G325R	0.24
SKCM	chr10	50844122	Missense_Mutation	NA	E34K	0.32
SKCM	chr10	50836186	Silent	rs752052860	V164V	0.52
SKCM	chr10	50820630	Silent	NA	K263K	0.69
SKCM	chr10	50816158	Missense_Mutation	NA	S330F	0.08
SKCM	chr10	50813866	Silent	NA	L446L	0.53
SKCM	chr10	50844122	Missense_Mutation	NA	E34K	0.27
SKCM	chr10	50850670	Intron	novel		0.47
SKCM	chr10	50844122	Missense_Mutation	NA	E34K	0.94
SKCM	chr10	50813997	Missense_Mutation	NA	A403T	0.35
SKCM	chr10	50816148	Missense_Mutation	NA	Q333H	0.47
SKCM	chr10	50816120	Missense_Mutation	novel	G343R	0.18
SKCM	chr10	50859844	Nonsense_Mutation	NA	Q33*	0.23
SKCM	chr10	50813975	Missense_Mutation	NA	G410E	0.41
SKCM	chr10	50859844	Nonsense_Mutation	NA	Q33*	0.41
SKCM	chr10	50844122	Missense_Mutation	NA	E34K	0.41
SKCM	chr10	50850716	Intron	novel		0.2
SKCM	chr10	50836144	Silent	novel	N178N	0.27
SKCM	chr10	50841869	Missense_Mutation	NA	E120K	0.87
SKCM	chr10	50836197	Missense_Mutation	novel	E161K	0.64	DND1_DSRM
SKCM	chr10	50814009	Missense_Mutation	rs766706018	R399C	0.44
SKCM	chr10	50859913	Missense_Mutation	rs769626580	G10R	0.45
SKCM	chr10	50836249	Silent	NA	I143I	0.2
SKCM	chr10	50816114	Missense_Mutation	NA	P345S	0.44
SKCM	chr10	50813921	Missense_Mutation	NA	G428E	0.26
SKCM	chr10	50816141	Missense_Mutation	rs574044306	D336N	0.2
SKCM	chr10	50844122	Missense_Mutation	NA	E34K	0.32
SKCM	chr10	50820566	Missense_Mutation	rs781647376	A285T	0.23
SKCM	chr10	50844057	Silent	NA	G55G	0.32
SKCM	chr10	50809939	Missense_Mutation	rs577250735	D530N	0.13
SKCM	chr10	50850785	Intron	novel		0.08
SKCM	chr10	50850807	Intron	novel		0.54
SKCM	chr10	50850807	Intron	novel		0.76
SKCM	chr10	50859885	Missense_Mutation	NA	A19V	0.41
SKCM	chr10	50850712	Intron	novel		0.4
SKCM	chr10	50828271	Missense_Mutation	novel	G210D	0.19
SKCM	chr10	50813967	Nonsense_Mutation	novel	V413*	0.06
SKCM	chr10	50813906	Missense_Mutation	novel	P433L	0.42
SKCM	chr10	50828210	Silent	NA	V230V	0.47
SKCM	chr10	50836216	Silent	rs76706180	S154S	0.57
SKCM	chr10	50850724	Intron	rs766003757		0.16
SKCM	chr10	50836210	Missense_Mutation	NA	M156I	0.4	DND1_DSRM
STAD	chr10	50844020	Missense_Mutation	NA	F68V	0.06
STAD	chr10	50811127	Missense_Mutation	novel	Q466R	0.11
STAD	chr10	50850799	Intron	novel		0.32
STAD	chr10	50816032	Missense_Mutation	novel	A372V	0.24
STAD	chr10	50811094	Missense_Mutation	NA	Q477R	0.38
STAD	chr10	50816273	Missense_Mutation	novel	D292H	0.18
STAD	chr10	50850736	Intron	novel		0.08
STAD	chr10	50859979	5'UTR	novel		0.34
STAD	chr10	50836279	Silent	NA	V133V	0.35
STAD	chr10	50828278	Nonsense_Mutation	rs749028994	G208*	0.11
STAD	chr10	50836257	Missense_Mutation	NA	G141W	0.23	DND1_DSRM
STAD	chr10	50813866	Silent	NA	L446L	0.17
UCEC	chr10	50811087	Missense_Mutation	NA	F479L	0.32
UCEC	chr10	50828203	Missense_Mutation	NA	L233I	0.37
UCEC	chr10	50820613	Missense_Mutation	NA	A269V	0.32
UCEC	chr10	50836180	Silent	NA	V166V	0.29
UCEC	chr10	50806794	Missense_Mutation	novel	T574A	0.2
UCEC	chr10	50811092	Missense_Mutation	novel	L478I	0.37
UCEC	chr10	50828216	Silent	novel	S228S	0.13
UCEC	chr10	50828162	Missense_Mutation	novel	M246I	0.09
UCEC	chr10	50836222	Silent	NA	I152I	0.28
UCEC	chr10	50841897	Missense_Mutation	NA	K110N	0.14
UCEC	chr10	50806789	Silent	NA	T575T	0.43
UCEC	chr10	50809947	Missense_Mutation	novel	D527G	0.37
UCEC	chr10	50836216	Silent	rs76706180	S154S	0.39
UCEC	chr10	50806613	3'UTR	novel		0.37
UCEC	chr10	50811087	Missense_Mutation	NA	F479L	0.31
UCEC	chr10	50859964	5'UTR	novel		0.12
UCEC	chr10	50859964	5'UTR	novel		0.08
UCEC	chr10	50828296	Splice_Site	novel	X202_splice	0.15
UCEC	chr10	50816066	Missense_Mutation	novel	F361L	0.38
UCEC	chr10	50850803	Intron	novel		0.13
UCEC	chr10	50813860	Silent	novel	P448P	0.26
UCEC	chr10	50816187	Silent	novel	G320G	0.38
UCEC	chr10	50814010	Silent	novel	G398G	0.37
UCEC	chr10	50850713	Intron	novel		0.3
UCEC	chr10	50844006	Silent	novel	L72L	0.07
UCEC	chr10	50810023	Missense_Mutation	novel	K502Q	0.5
UCEC	chr10	50811165	Missense_Mutation	novel	E453D	0.47
UCEC	chr10	50850677	Intron	novel		0.14
UCEC	chr10	50816123	Missense_Mutation	novel	L342F	0.09
UCEC	chr10	50809994	Missense_Mutation	novel	K511N	0.19
UCEC	chr10	50816156	Missense_Mutation	novel	L331V	0.37
UCEC	chr10	50836227	Nonsense_Mutation	novel	E151*	0.32	DND1_DSRM
UCEC	chr10	50841990	Splice_Region	rs777129780	I79I	0.34
UCEC	chr10	50806810	Missense_Mutation	novel	Q568H	0.42
UCEC	chr10	50836174	Silent	novel	V168V	0.16
UCEC	chr10	50859959	5'UTR	novel		0.11
UCEC	chr10	50809972	Missense_Mutation	rs546119810	L519M	0.12
UCEC	chr10	50836190	Missense_Mutation	novel	V163G	0.13	DND1_DSRM
UCEC	chr10	50836305	Missense_Mutation	rs375285515	R125C	0.18
UCEC	chr10	50836186	Silent	rs752052860	V164V	0.41
UCEC	chr10	50806799	Missense_Mutation	novel	A572E	0.28
UCEC	chr10	50828217	Missense_Mutation	novel	S228Y	0.45
UCEC	chr10	50859878	Silent	rs371584214	R21R	0.47
UCEC	chr10	50816024	Nonsense_Mutation	rs371633684	R375*	0.43
UCEC	chr10	50816027	Missense_Mutation	novel	I374V	0.09
UCEC	chr10	50859877	Missense_Mutation	novel	A22T	0.12
UCEC	chr10	50813971	Silent	novel	Y411Y	0.05
UCEC	chr10	50820650	Splice_Site	novel	X257_splice	0.45
UCEC	chr10	50811038	Splice_Site	NA	X495_splice	0.4
UCEC	chr10	50813961	Nonsense_Mutation	novel	G415*	0.43
UCEC	chr10	50850794	Intron	novel		0.38
UCEC	chr10	50806796	Missense_Mutation	novel	Y573C	0.17
UCEC	chr10	50836143	Nonsense_Mutation	rs760319331	R179*	0.31	DND1_DSRM
UCEC	chr10	50859861	Missense_Mutation	novel	T27I	0.44
UCEC	chr10	50816160	Nonsense_Mutation	novel	Y329*	0.3

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
ACC	DEL	0.1	0.19593
ESCA	DEL	0.1739	0.039099
KIRP	DEL	0.066	0.1975
SKCM	DEL	0.515	0.059549
UCEC	DEL	0.0686	0.011507

Survival Analysis

Cancer	P-value	Q-value
HNSC	0.0022	Kaplan-Meier Survival Analysis
LUSC	0.0024	Kaplan-Meier Survival Analysis
BRCA	0.022	Kaplan-Meier Survival Analysis
PAAD	0.022	Kaplan-Meier Survival Analysis
BLCA	0.0004	Kaplan-Meier Survival Analysis
UCEC	0.0087	Kaplan-Meier Survival Analysis
LUAD	0.0096	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000148584 (Gene tree)
Gene ID: 29974
Gene Symbol: A1CF
Alias: ACF|ASP|ACF64|ACF65|APOBEC1CF
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 86,267 bases
Position: chr10:50,799,409-50,885,675
Accession: 24086
RBP type: canonical RBP
Summary: Mammalian apolipoprotein B mRNA undergoes site-specific C to U deamination, which is mediated by a multi-component enzyme complex containing a minimal core composed of APOBEC-1 and a complementation factor encoded by this gene. The gene product has three non-identical RNA recognition motifs and belongs to the hnRNP R family of RNA-binding proteins. It has been proposed that this complementation factor functions as an RNA-binding subunit and docks APOBEC-1 to deaminate the upstream cytidine. Studies suggest that the protein may also be involved in other RNA editing or RNA processing events. Several transcript variants encoding a few different isoforms have been found for this gene. [provided by RefSeq, Nov 2010]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000282641	DND1_DSRM	PF14709.7	2.3e-24	1	1
ENSP00000363109	DND1_DSRM	PF14709.7	2.3e-24	1	1
ENSP00000363113	DND1_DSRM	PF14709.7	2.3e-24	1	1
ENSP00000363107	DND1_DSRM	PF14709.7	2.4e-24	1	1
ENSP00000378873	DND1_DSRM	PF14709.7	2.4e-24	1	1
ENSP00000363105	DND1_DSRM	PF14709.7	2.4e-24	1	1
ENSP00000378868	DND1_DSRM	PF14709.7	2.4e-24	1	1
ENSP00000282641	RRM_1	PF00076.22	8.3e-40	1	3
ENSP00000282641	RRM_1	PF00076.22	8.3e-40	2	3
ENSP00000282641	RRM_1	PF00076.22	8.3e-40	3	3
ENSP00000363109	RRM_1	PF00076.22	8.3e-40	1	3
ENSP00000363109	RRM_1	PF00076.22	8.3e-40	2	3
ENSP00000363109	RRM_1	PF00076.22	8.3e-40	3	3
ENSP00000363113	RRM_1	PF00076.22	8.3e-40	1	3
ENSP00000363113	RRM_1	PF00076.22	8.3e-40	2	3
ENSP00000363113	RRM_1	PF00076.22	8.3e-40	3	3
ENSP00000363105	RRM_1	PF00076.22	8.8e-40	1	3
ENSP00000363105	RRM_1	PF00076.22	8.8e-40	2	3
ENSP00000363105	RRM_1	PF00076.22	8.8e-40	3	3
ENSP00000363107	RRM_1	PF00076.22	9.6e-40	1	3
ENSP00000363107	RRM_1	PF00076.22	9.6e-40	2	3
ENSP00000363107	RRM_1	PF00076.22	9.6e-40	3	3
ENSP00000378873	RRM_1	PF00076.22	9.6e-40	1	3
ENSP00000378873	RRM_1	PF00076.22	9.6e-40	2	3
ENSP00000378873	RRM_1	PF00076.22	9.6e-40	3	3
ENSP00000378868	RRM_1	PF00076.22	1e-39	1	3
ENSP00000378868	RRM_1	PF00076.22	1e-39	2	3
ENSP00000378868	RRM_1	PF00076.22	1e-39	3	3
ENSP00000397953	RRM_1	PF00076.22	7.5e-28	1	2
ENSP00000397953	RRM_1	PF00076.22	7.5e-28	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
10781591	Purification and molecular cloning of a novel essential component of the apolipoprotein B mRNA editing enzyme-complex.	J Biol Chem	2000 Jun 30	Lellek H	-
31080349	Curcumin modulates the apolipoprotein B mRNA editing by coordinating the expression of cytidine deamination to uridine editosome components in primary mouse hepatocytes.	Korean J Physiol Pharmacol	2019 May	He P	doi: 10.4196/kjpp.2019.23.3.181
25585043	Re-editing the paradigm of Cytidine (C) to Uridine (U) RNA editing.	RNA Biol	2014	Fossat N	doi: 10.1080/15476286.2014.996054.
11571303	Mutagenesis of apobec-1 complementation factor reveals distinct domains that modulate RNA binding, protein-protein interaction with apobec-1, and complementation of C to U RNA-editing activity.	J Biol Chem	2001 Dec 7	Blanc V	-
11577082	Novel role for RNA-binding protein CUGBP2 in mammalian RNA editing. CUGBP2 modulates C to U editing of apolipoprotein B mRNA by interacting with apobec-1 and ACF, the apobec-1 complementation factor.	J Biol Chem	2001 Dec 14	Anant S	-
11134005	Identification of GRY-RBP as an apolipoprotein B RNA-binding protein that interacts with both apobec-1 and apobec-1 complementation factor to modulate C to U editing.	J Biol Chem	2001 Mar 30	Blanc V	-
20541607	Metabolic regulation of APOBEC-1 complementation factor trafficking in mouse models of obesity and its positive correlation with the expression of ApoB protein in hepatocytes.	Biochim Biophys Acta	2010 Nov	Galloway CA	doi: 10.1016/j.bbadis.2010.06.003
20406809	Apobec-1 complementation factor modulates liver regeneration by post-transcriptional regulation of interleukin-6 mRNA stability.	J Biol Chem	2010 Jun 18	Blanc V	doi: 10.1074/jbc.M110.115147
24916387	C to U RNA editing mediated by APOBEC1 requires RNA-binding protein RBM47.	EMBO Rep	2014 Aug	Fossat N	doi: 10.15252/embr.201438450
27582469	Parent-of-origin effects of A1CF and AGO2 on testicular germ-cell tumors, testicular abnormalities, and fertilization bias.	Proc Natl Acad Sci U S A	2016 Sep 13	Carouge D	doi: 10.1073/pnas.1604773113
30309881	Apobec1 complementation factor (A1CF) and RBM47 interact in tissue-specific regulation of C to U RNA editing in mouse intestine and liver.	RNA	2019 Jan	Blanc V	doi: 10.1261/rna.068395.118
31186064	Inhibition of the aberrant A1CF-FAM224A-miR-590-3p-ZNF143 positive feedback loop attenuated malignant biological behaviors of glioma cells.	J Exp Clin Cancer Res	2019 Jun 11	Song Y	doi: 10.1186/s13046-019-1200-5.
16920700	ApoB mRNA editing is mediated by a coordinated modulation of multiple apoB mRNA editing enzyme components.	Am J Physiol Gastrointest Liver Physiol	2007 Jan	Chen Z	-
14570923	Identification of novel alternative splice variants of APOBEC-1 complementation factor with different capacities to support apolipoprotein B mRNA editing.	J Biol Chem	2004 Jan 2	Sowden MP	-
12896982	A novel nuclear localization signal in the auxiliary domain of apobec-1 complementation factor regulates nucleocytoplasmic import and shuttling.	J Biol Chem	2003 Oct 17	Blanc V	-
12881431	The apolipoprotein B mRNA editing complex performs a multifunctional cycle and suppresses nonsense-mediated decay.	EMBO J	2003 Aug 1	Chester A	-
11870221	The editosome for cytidine to uridine mRNA editing has a native complexity of 27S: identification of intracellular domains containing active and inactive editing factors.	J Cell Sci	2002 Mar 1	Sowden MP	-
11871661	Identification of domains in apobec-1 complementation factor required for RNA binding and apolipoprotein-B mRNA editing.	RNA	2002 Jan	Mehta A	-
10669759	Molecular cloning of apobec-1 complementation factor, a novel RNA-binding protein involved in the editing of apolipoprotein B mRNA.	Mol Cell Biol	2000 Mar	Mehta A	-
16055734	Targeted deletion of the murine apobec-1 complementation factor (acf) gene results in embryonic lethality.	Mol Cell Biol	2005 Aug	Blanc V	-
15103077	Isolation of an mRNA-binding protein involved in C-to-U editing.	Methods Mol Biol	2004	Gerber CA	-
22923694	Transgenerational epigenetic effects of the Apobec1 cytidine deaminase deficiency on testicular germ cell tumor susceptibility and embryonic viability.	Proc Natl Acad Sci U S A	2012 Oct 9	Nelson VR	doi: 10.1073/pnas.1207169109
28069890	APOBEC1 complementation factor (A1CF) is dispensable for C-to-U RNA editing in vivo.	RNA	2017 Apr	Snyder EM	doi: 10.1261/rna.058818.116

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000414883	A1CF-208	885	-	ENSP00000397953	201 (aa)	-	Q5T0W7
ENST00000473480	A1CF-209	813	-	-	- (aa)	-	-
ENST00000395489	A1CF-206	9517	XM_011539729	ENSP00000378868	602 (aa)	XP_011538031	F8W9F8
ENST00000282641	A1CF-201	9350	-	ENSP00000282641	586 (aa)	-	Q9NQ94
ENST00000493415	A1CF-210	926	-	-	- (aa)	-	-
ENST00000374001	A1CF-205	9221	XM_017016160	ENSP00000363113	586 (aa)	XP_016871649	Q9NQ94
ENST00000373997	A1CF-204	2116	-	ENSP00000363109	586 (aa)	-	Q9NQ94
ENST00000373995	A1CF-203	2211	-	ENSP00000363107	594 (aa)	-	Q9NQ94
ENST00000373993	A1CF-202	1997	XM_005269718	ENSP00000363105	594 (aa)	XP_005269775	Q9NQ94
ENST00000395495	A1CF-207	9400	-	ENSP00000378873	594 (aa)	-	Q9NQ94

Gene Model

Click here to download ENSG00000148584's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000148584	Body Height	6.4030000E-005	-
ENSG00000148584	Platelet Function Tests	8.1800000E-006	-
ENSG00000148584	Uric Acid	7E-17	23263486
ENSG00000148584	Thinness	1E-6	25811787
ENSG00000148584	Uric Acid	1E-6	25811787
ENSG00000148584	Narcolepsy	5E-6	25986216
ENSG00000148584	Creatinine	1E-12	26831199
ENSG00000148584	Glomerular Filtration Rate	1E-12	26831199

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000148584	rs10994860	10	50885664	T	Glomerular filtration rate in non diabetics (creatinine)	26831199	[NR] unit increase	0.0077	EFO_0005208\|EFO_0004518
ENSG00000148584	rs4256922	10	50808856	C	Urate levels in lean individuals	25811787	[0.049-0.111] kg/m2 decrease	0.08	EFO_0004531\|EFO_0005936
ENSG00000148584	rs10994856	10	50885488	A	Glomerular filtration rate (creatinine)	28452372	[0.0051-0.0099] unit increase	0.0075	EFO_0005208\|EFO_0004518

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000148584's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000148584	A1CF	93	43.548	ENSG00000256453	DND1	58	42.512
ENSG00000148584	A1CF	74	33.784	ENSG00000101489	CELF4	58	30.508
ENSG00000148584	A1CF	98	73.469	ENSG00000163694	RBM47	92	73.000
ENSG00000148584	A1CF	92	59.358	ENSG00000135316	SYNCRIP	85	45.161
ENSG00000148584	A1CF	92	58.289	ENSG00000125944	HNRNPR	59	51.724
ENSG00000148584	A1CF	95	73.158	ENSG00000151962	RBM46	98	60.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000148584	A1CF	100	88.119	ENSAPOG00000008259	a1cf	100	74.242	Acanthochromis_polyacanthus
ENSG00000148584	A1CF	100	97.015	ENSAMEG00000000523	A1CF	100	95.623	Ailuropoda_melanoleuca
ENSG00000148584	A1CF	100	88.119	ENSACIG00000008632	a1cf	100	77.355	Amphilophus_citrinellus
ENSG00000148584	A1CF	100	88.119	ENSAOCG00000023744	a1cf	96	84.348	Amphiprion_ocellaris
ENSG00000148584	A1CF	100	87.624	ENSAPEG00000009537	a1cf	100	75.738	Amphiprion_percula
ENSG00000148584	A1CF	100	88.614	ENSATEG00000013720	a1cf	100	78.218	Anabas_testudineus
ENSG00000148584	A1CF	100	95.522	ENSAPLG00000002964	A1CF	100	88.908	Anas_platyrhynchos
ENSG00000148584	A1CF	100	91.045	ENSACAG00000015269	A1CF	100	83.646	Anolis_carolinensis
ENSG00000148584	A1CF	100	99.502	ENSANAG00000019974	A1CF	100	98.637	Aotus_nancymaae
ENSG00000148584	A1CF	100	89.109	ENSACLG00000017428	a1cf	100	76.119	Astatotilapia_calliptera
ENSG00000148584	A1CF	100	74.876	ENSAMXG00000018180	a1cf	100	75.041	Astyanax_mexicanus
ENSG00000148584	A1CF	100	99.005	ENSBTAG00000021195	A1CF	100	96.468	Bos_taurus
ENSG00000148584	A1CF	100	99.502	ENSCJAG00000005045	A1CF	100	98.655	Callithrix_jacchus
ENSG00000148584	A1CF	100	97.015	ENSCAFG00000015581	A1CF	100	95.455	Canis_familiaris
ENSG00000148584	A1CF	100	97.015	ENSCAFG00020026421	A1CF	100	95.455	Canis_lupus_dingo
ENSG00000148584	A1CF	100	99.005	ENSCHIG00000020411	A1CF	100	95.462	Capra_hircus
ENSG00000148584	A1CF	100	92.359	ENSTSYG00000001755	A1CF	100	96.926	Carlito_syrichta
ENSG00000148584	A1CF	100	82.822	ENSCAPG00000017386	A1CF	89	95.868	Cavia_aperea
ENSG00000148584	A1CF	100	99.005	ENSCPOG00000009807	A1CF	100	95.960	Cavia_porcellus
ENSG00000148584	A1CF	100	99.502	ENSCCAG00000018168	A1CF	100	98.151	Cebus_capucinus
ENSG00000148584	A1CF	100	99.005	ENSCATG00000043715	A1CF	100	97.785	Cercocebus_atys
ENSG00000148584	A1CF	100	99.005	ENSCLAG00000010424	A1CF	100	95.973	Chinchilla_lanigera
ENSG00000148584	A1CF	100	99.502	ENSCSAG00000007032	A1CF	100	98.151	Chlorocebus_sabaeus
ENSG00000148584	A1CF	99	91.414	ENSCHOG00000009089	A1CF	99	91.582	Choloepus_hoffmanni
ENSG00000148584	A1CF	100	94.527	ENSCPBG00000026464	A1CF	100	88.403	Chrysemys_picta_bellii
ENSG00000148584	A1CF	100	99.502	ENSCANG00000038032	A1CF	100	98.151	Colobus_angolensis_palliatus
ENSG00000148584	A1CF	100	98.507	ENSCGRG00001017413	A1cf	100	94.286	Cricetulus_griseus_chok1gshd
ENSG00000148584	A1CF	100	98.507	ENSCGRG00000017332	A1cf	100	93.613	Cricetulus_griseus_crigri
ENSG00000148584	A1CF	100	83.168	ENSCSEG00000002361	a1cf	100	76.119	Cynoglossus_semilaevis
ENSG00000148584	A1CF	100	87.624	ENSCVAG00000010520	a1cf	100	77.228	Cyprinodon_variegatus
ENSG00000148584	A1CF	100	87.562	ENSDARG00000002968	a1cf	100	80.405	Danio_rerio
ENSG00000148584	A1CF	100	97.015	ENSDNOG00000002829	A1CF	100	95.126	Dasypus_novemcinctus
ENSG00000148584	A1CF	61	99.180	ENSDORG00000025837	-	100	99.180	Dipodomys_ordii
ENSG00000148584	A1CF	94	90.426	ENSETEG00000012527	A1CF	84	91.349	Echinops_telfairi
ENSG00000148584	A1CF	100	99.502	ENSEASG00005012924	A1CF	100	96.482	Equus_asinus_asinus
ENSG00000148584	A1CF	100	99.005	ENSECAG00000010424	A1CF	100	95.980	Equus_caballus
ENSG00000148584	A1CF	61	99.187	ENSEEUG00000000013	A1CF	100	81.441	Erinaceus_europaeus
ENSG00000148584	A1CF	100	87.562	ENSELUG00000003159	a1cf	100	79.833	Esox_lucius
ENSG00000148584	A1CF	100	96.020	ENSFCAG00000011179	A1CF	100	94.369	Felis_catus
ENSG00000148584	A1CF	100	95.025	ENSFALG00000013183	A1CF	100	86.882	Ficedula_albicollis
ENSG00000148584	A1CF	100	99.502	ENSFDAG00000019371	A1CF	100	95.571	Fukomys_damarensis
ENSG00000148584	A1CF	100	72.277	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSG00000148584	A1CF	100	80.597	ENSGMOG00000018943	a1cf	100	72.066	Gadus_morhua
ENSG00000148584	A1CF	99	83.973	ENSGALG00000003765	A1CF	97	87.766	Gallus_gallus
ENSG00000148584	A1CF	100	87.129	ENSGAFG00000014868	a1cf	100	71.667	Gambusia_affinis
ENSG00000148584	A1CF	100	81.188	ENSGACG00000010241	a1cf	100	75.000	Gasterosteus_aculeatus
ENSG00000148584	A1CF	94	88.434	ENSGAGG00000016508	A1CF	98	87.831	Gopherus_agassizii
ENSG00000148584	A1CF	100	100.000	ENSGGOG00000009670	A1CF	100	99.832	Gorilla_gorilla
ENSG00000148584	A1CF	100	89.109	ENSHBUG00000021959	a1cf	100	77.190	Haplochromis_burtoni
ENSG00000148584	A1CF	100	98.507	ENSHGLG00000008955	A1CF	100	96.134	Heterocephalus_glaber_female
ENSG00000148584	A1CF	100	98.507	ENSHGLG00100000518	A1CF	100	95.462	Heterocephalus_glaber_male
ENSG00000148584	A1CF	100	83.168	ENSHCOG00000017669	a1cf	100	72.638	Hippocampus_comes
ENSG00000148584	A1CF	100	87.562	ENSIPUG00000010367	a1cf	96	83.209	Ictalurus_punctatus
ENSG00000148584	A1CF	61	99.180	ENSSTOG00000005763	-	100	99.180	Ictidomys_tridecemlineatus
ENSG00000148584	A1CF	61	99.180	ENSJJAG00000011550	-	100	99.180	Jaculus_jaculus
ENSG00000148584	A1CF	100	88.614	ENSKMAG00000006568	a1cf	100	77.398	Kryptolebias_marmoratus
ENSG00000148584	A1CF	100	88.614	ENSLBEG00000020994	a1cf	98	76.847	Labrus_bergylta
ENSG00000148584	A1CF	100	91.045	ENSLACG00000008061	A1CF	100	82.203	Latimeria_chalumnae
ENSG00000148584	A1CF	100	90.050	ENSLOCG00000006302	a1cf	100	82.137	Lepisosteus_oculatus
ENSG00000148584	A1CF	100	97.512	ENSLAFG00000015462	A1CF	100	94.454	Loxodonta_africana
ENSG00000148584	A1CF	100	99.502	ENSMFAG00000035948	A1CF	100	98.126	Macaca_fascicularis
ENSG00000148584	A1CF	100	99.502	ENSMMUG00000007077	A1CF	100	98.126	Macaca_mulatta
ENSG00000148584	A1CF	100	99.502	ENSMNEG00000031454	A1CF	100	97.785	Macaca_nemestrina
ENSG00000148584	A1CF	100	99.005	ENSMLEG00000037223	A1CF	100	97.815	Mandrillus_leucophaeus
ENSG00000148584	A1CF	100	88.119	ENSMAMG00000010402	a1cf	100	76.987	Mastacembelus_armatus
ENSG00000148584	A1CF	100	89.109	ENSMZEG00005013245	a1cf	100	76.795	Maylandia_zebra
ENSG00000148584	A1CF	100	94.059	ENSMGAG00000001507	A1CF	100	87.919	Meleagris_gallopavo
ENSG00000148584	A1CF	100	98.010	ENSMAUG00000007422	A1cf	100	93.782	Mesocricetus_auratus
ENSG00000148584	A1CF	100	99.005	ENSMICG00000003377	A1CF	100	96.102	Microcebus_murinus
ENSG00000148584	A1CF	100	98.507	ENSMOCG00000021536	A1cf	100	93.782	Microtus_ochrogaster
ENSG00000148584	A1CF	100	75.248	ENSMMOG00000009422	a1cf	100	70.266	Mola_mola
ENSG00000148584	A1CF	100	97.015	ENSMODG00000016478	A1CF	99	91.450	Monodelphis_domestica
ENSG00000148584	A1CF	100	87.129	ENSMALG00000012992	a1cf	100	72.927	Monopterus_albus
ENSG00000148584	A1CF	100	97.015	MGP_CAROLIEiJ_G0022873	A1cf	100	93.613	Mus_caroli
ENSG00000148584	A1CF	100	97.015	ENSMUSG00000052595	A1cf	99	95.801	Mus_musculus
ENSG00000148584	A1CF	100	96.517	MGP_PahariEiJ_G0014366	A1cf	100	92.773	Mus_pahari
ENSG00000148584	A1CF	100	97.015	MGP_SPRETEiJ_G0023792	A1cf	100	93.109	Mus_spretus
ENSG00000148584	A1CF	100	90.236	ENSMPUG00000016971	A1CF	100	90.236	Mustela_putorius_furo
ENSG00000148584	A1CF	100	98.507	ENSMLUG00000016071	A1CF	100	94.454	Myotis_lucifugus
ENSG00000148584	A1CF	100	97.512	ENSNGAG00000015136	A1cf	100	94.958	Nannospalax_galili
ENSG00000148584	A1CF	100	89.109	ENSNBRG00000001712	a1cf	100	77.521	Neolamprologus_brichardi
ENSG00000148584	A1CF	100	99.502	ENSNLEG00000012028	A1CF	100	98.992	Nomascus_leucogenys
ENSG00000148584	A1CF	94	91.155	ENSMEUG00000015909	A1CF	100	91.155	Notamacropus_eugenii
ENSG00000148584	A1CF	100	96.517	ENSOPRG00000010667	A1CF	97	85.849	Ochotona_princeps
ENSG00000148584	A1CF	61	95.082	ENSODEG00000012177	-	100	95.082	Octodon_degus
ENSG00000148584	A1CF	100	89.109	ENSONIG00000019105	a1cf	100	77.025	Oreochromis_niloticus
ENSG00000148584	A1CF	100	95.522	ENSOANG00000007360	A1CF	99	90.196	Ornithorhynchus_anatinus
ENSG00000148584	A1CF	100	98.010	ENSOCUG00000011587	A1CF	100	94.898	Oryctolagus_cuniculus
ENSG00000148584	A1CF	100	87.624	ENSORLG00000013342	a1cf	100	73.744	Oryzias_latipes
ENSG00000148584	A1CF	100	87.624	ENSORLG00020000586	a1cf	100	75.733	Oryzias_latipes_hni
ENSG00000148584	A1CF	100	87.624	ENSORLG00015018569	a1cf	100	75.570	Oryzias_latipes_hsok
ENSG00000148584	A1CF	100	87.624	ENSOMEG00000013531	a1cf	100	75.124	Oryzias_melastigma
ENSG00000148584	A1CF	100	98.507	ENSOGAG00000012884	A1CF	100	95.623	Otolemur_garnettii
ENSG00000148584	A1CF	100	99.005	ENSOARG00000013695	A1CF	100	95.462	Ovis_aries
ENSG00000148584	A1CF	100	100.000	ENSPPAG00000028115	A1CF	100	100.000	Pan_paniscus
ENSG00000148584	A1CF	100	96.517	ENSPPRG00000012180	A1CF	100	94.781	Panthera_pardus
ENSG00000148584	A1CF	100	96.517	ENSPTIG00000021223	A1CF	100	94.781	Panthera_tigris_altaica
ENSG00000148584	A1CF	100	100.000	ENSPTRG00000002508	A1CF	100	99.663	Pan_troglodytes
ENSG00000148584	A1CF	100	99.502	ENSPANG00000021988	A1CF	100	98.126	Papio_anubis
ENSG00000148584	A1CF	100	87.065	ENSPKIG00000025176	a1cf	100	80.333	Paramormyrops_kingsleyae
ENSG00000148584	A1CF	100	93.532	ENSPSIG00000010318	A1CF	100	87.905	Pelodiscus_sinensis
ENSG00000148584	A1CF	100	84.080	ENSPMGG00000013359	a1cf	99	68.503	Periophthalmus_magnuspinnatus
ENSG00000148584	A1CF	100	99.005	ENSPEMG00000015021	A1cf	100	94.454	Peromyscus_maniculatus_bairdii
ENSG00000148584	A1CF	100	94.030	ENSPCIG00000002175	A1CF	100	90.971	Phascolarctos_cinereus
ENSG00000148584	A1CF	100	87.129	ENSPFOG00000006683	a1cf	100	77.362	Poecilia_formosa
ENSG00000148584	A1CF	100	87.129	ENSPFOG00000007437	-	100	77.199	Poecilia_formosa
ENSG00000148584	A1CF	100	87.129	ENSPLAG00000001210	-	100	77.063	Poecilia_latipinna
ENSG00000148584	A1CF	100	87.129	ENSPLAG00000000026	a1cf	100	77.063	Poecilia_latipinna
ENSG00000148584	A1CF	100	87.129	ENSPMEG00000000921	a1cf	100	69.536	Poecilia_mexicana
ENSG00000148584	A1CF	100	87.129	ENSPMEG00000015529	-	100	69.771	Poecilia_mexicana
ENSG00000148584	A1CF	100	86.139	ENSPREG00000016298	a1cf	100	77.036	Poecilia_reticulata
ENSG00000148584	A1CF	100	99.005	ENSPPYG00000002819	A1CF	100	98.807	Pongo_abelii
ENSG00000148584	A1CF	79	74.784	ENSPCAG00000006463	A1CF	79	74.784	Procavia_capensis
ENSG00000148584	A1CF	100	99.005	ENSPCOG00000024172	A1CF	100	96.812	Propithecus_coquereli
ENSG00000148584	A1CF	100	89.109	ENSPNYG00000017944	a1cf	100	77.488	Pundamilia_nyererei
ENSG00000148584	A1CF	100	87.562	ENSPNAG00000007704	a1cf	100	81.040	Pygocentrus_nattereri
ENSG00000148584	A1CF	100	98.010	ENSRNOG00000033195	A1cf	100	93.526	Rattus_norvegicus
ENSG00000148584	A1CF	100	91.457	ENSRBIG00000042892	A1CF	100	96.620	Rhinopithecus_bieti
ENSG00000148584	A1CF	100	99.502	ENSRROG00000041398	A1CF	100	98.151	Rhinopithecus_roxellana
ENSG00000148584	A1CF	100	99.502	ENSSBOG00000021930	A1CF	100	98.487	Saimiri_boliviensis_boliviensis
ENSG00000148584	A1CF	100	97.015	ENSSHAG00000005096	A1CF	100	90.084	Sarcophilus_harrisii
ENSG00000148584	A1CF	100	88.557	ENSSFOG00015011774	a1cf	100	80.336	Scleropages_formosus
ENSG00000148584	A1CF	100	86.634	ENSSMAG00000013271	a1cf	100	75.407	Scophthalmus_maximus
ENSG00000148584	A1CF	100	87.129	ENSSDUG00000013930	a1cf	100	77.612	Seriola_dumerili
ENSG00000148584	A1CF	100	87.129	ENSSLDG00000004290	a1cf	100	71.405	Seriola_lalandi_dorsalis
ENSG00000148584	A1CF	86	98.256	ENSSARG00000005940	A1CF	99	82.624	Sorex_araneus
ENSG00000148584	A1CF	99	84.193	ENSSPUG00000006797	A1CF	99	84.193	Sphenodon_punctatus
ENSG00000148584	A1CF	65	80.153	ENSSPAG00000017066	-	89	80.153	Stegastes_partitus
ENSG00000148584	A1CF	100	99.502	ENSSSCG00000010431	A1CF	100	96.134	Sus_scrofa
ENSG00000148584	A1CF	100	95.025	ENSTGUG00000005090	A1CF	100	86.957	Taeniopygia_guttata
ENSG00000148584	A1CF	100	84.653	ENSTRUG00000001982	a1cf	100	74.878	Takifugu_rubripes
ENSG00000148584	A1CF	100	85.644	ENSTNIG00000003580	a1cf	100	75.285	Tetraodon_nigroviridis
ENSG00000148584	A1CF	100	88.067	ENSTTRG00000013190	A1CF	100	88.235	Tursiops_truncatus
ENSG00000148584	A1CF	100	97.015	ENSUAMG00000020065	A1CF	100	95.563	Ursus_americanus
ENSG00000148584	A1CF	100	96.517	ENSUMAG00000011162	A1CF	100	95.118	Ursus_maritimus
ENSG00000148584	A1CF	99	81.926	ENSVPAG00000006130	A1CF	99	81.926	Vicugna_pacos
ENSG00000148584	A1CF	100	97.015	ENSVVUG00000002504	A1CF	100	95.222	Vulpes_vulpes
ENSG00000148584	A1CF	100	88.557	ENSXETG00000006611	a1cf	100	78.297	Xenopus_tropicalis
ENSG00000148584	A1CF	100	86.634	ENSXCOG00000003302	a1cf	100	77.907	Xiphophorus_couchianus
ENSG00000148584	A1CF	100	86.634	ENSXMAG00000016703	a1cf	100	78.033	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003725	double-stranded RNA binding	11871661.	IDA	Function
GO:0003727	single-stranded RNA binding	11871661.	IDA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005515	protein binding	10669759.12896982.25416956.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	IDA	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005737	cytoplasm	12881431.	IDA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0010609	mRNA localization resulting in posttranscriptional regulation of gene expression	21873635.	IBA	Process
GO:0016554	cytidine to uridine editing	21873635.	IBA	Process
GO:0016554	cytidine to uridine editing	-	TAS	Process
GO:0016556	mRNA modification	21873635.	IBA	Process
GO:0030895	apolipoprotein B mRNA editing enzyme complex	21873635.	IBA	Component
GO:0030895	apolipoprotein B mRNA editing enzyme complex	10781591.	IDA	Component
GO:0050821	protein stabilization	12881431.	IDA	Process

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.