Cancer | Chr | Position | Mutation Type | dbSNP | Protein-change | Allele Freq | RBD |
---|---|---|---|---|---|---|---|
ACC | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BRCA | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
ESCA | |||||||
GBM | |||||||
GBM | |||||||
HNSC | |||||||
KIRC | |||||||
KIRP | |||||||
LGG | |||||||
LIHC | |||||||
LUAD | |||||||
LUAD | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
OV | |||||||
PRAD | |||||||
PRAD | |||||||
READ | |||||||
READ | |||||||
READ | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
THCA | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC |
Cancer | Type | Freq | Q-value |
---|---|---|---|
BLCA | |||
BRCA | |||
CHOL | |||
DLBC | |||
ESCA | |||
LUAD | |||
MESO | |||
PAAD | |||
SARC | |||
SKCM | |||
STAD |
Cancer | P-value | Q-value |
---|---|---|
SARC | ||
ACC | ||
SKCM | ||
TGCT | ||
KIRP | ||
PAAD | ||
BLCA | ||
READ | ||
LAML | ||
UCEC | ||
LIHC | ||
DLBC | ||
LGG | ||
OV |
Protein ID | Domain | Pfam ID | E-value | Domain number | Total number |
---|---|---|---|---|---|
ENSP00000414302 | RRM_1 | PF00076.22 | 1.5e-18 | 1 | 1 |
Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENST00000517387 | SRSF12-204 | 567 | - | ENSP00000427982 | 41 (aa) | - | E5RFT0 |
ENST00000524221 | SRSF12-205 | 793 | - | - | - (aa) | - | - |
ENST00000475068 | SRSF12-202 | 758 | - | ENSP00000430513 | 42 (aa) | - | E5RJS0 |
ENST00000452027 | SRSF12-201 | 3599 | XM_006715348 | ENSP00000414302 | 261 (aa) | XP_006715411 | Q8WXF0 |
ENST00000488604 | SRSF12-203 | 693 | - | - | - (aa) | - | - |
Ensembl ID | Gene Symbol | Coverage | Identiy | Paralog | Gene Symbol | Coverage | Identiy |
---|---|---|---|---|---|---|---|
ENSG00000154548 | SRSF12 | 73 | 66.667 | ENSG00000188529 | SRSF10 | 90 | 85.484 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSG00000154548 | SRSF12 | 73 | 53.333 | ENSAPOG00000024545 | - | 91 | 86.207 | Acanthochromis_polyacanthus |
ENSG00000154548 | SRSF12 | 100 | 93.511 | ENSAMEG00000000418 | SRSF12 | 100 | 93.511 | Ailuropoda_melanoleuca |
ENSG00000154548 | SRSF12 | 73 | 50.000 | ENSACIG00000001537 | - | 83 | 82.759 | Amphilophus_citrinellus |
ENSG00000154548 | SRSF12 | 73 | 53.333 | ENSACIG00000018697 | - | 85 | 86.207 | Amphilophus_citrinellus |
ENSG00000154548 | SRSF12 | 54 | 72.727 | ENSAPEG00000004873 | - | 70 | 83.810 | Amphiprion_percula |
ENSG00000154548 | SRSF12 | 73 | 46.667 | ENSATEG00000003493 | - | 81 | 81.034 | Anabas_testudineus |
ENSG00000154548 | SRSF12 | 100 | 93.431 | ENSANAG00000023238 | SRSF12 | 100 | 93.431 | Aotus_nancymaae |
ENSG00000154548 | SRSF12 | 73 | 53.333 | ENSAMXG00000031867 | - | 84 | 82.759 | Astyanax_mexicanus |
ENSG00000154548 | SRSF12 | 100 | 98.084 | ENSBTAG00000046235 | SRSF12 | 100 | 98.084 | Bos_taurus |
ENSG00000154548 | SRSF12 | 100 | 98.855 | ENSCJAG00000038575 | SRSF12 | 100 | 98.855 | Callithrix_jacchus |
ENSG00000154548 | SRSF12 | 92 | 98.333 | ENSCAFG00000030745 | SRSF12 | 75 | 98.333 | Canis_familiaris |
ENSG00000154548 | SRSF12 | 100 | 98.084 | ENSCAFG00020015999 | SRSF12 | 100 | 98.084 | Canis_lupus_dingo |
ENSG00000154548 | SRSF12 | 100 | 96.947 | ENSCHIG00000014596 | SRSF12 | 100 | 96.947 | Capra_hircus |
ENSG00000154548 | SRSF12 | 73 | 66.667 | ENSCHIG00000023999 | - | 90 | 85.484 | Capra_hircus |
ENSG00000154548 | SRSF12 | 92 | 96.250 | ENSTSYG00000001269 | SRSF12 | 98 | 96.250 | Carlito_syrichta |
ENSG00000154548 | SRSF12 | 97 | 92.157 | ENSCAPG00000001547 | SRSF12 | 100 | 92.157 | Cavia_aperea |
ENSG00000154548 | SRSF12 | 92 | 96.653 | ENSCPOG00000010917 | SRSF12 | 100 | 96.653 | Cavia_porcellus |
ENSG00000154548 | SRSF12 | 100 | 100.000 | ENSCCAG00000033029 | SRSF12 | 100 | 100.000 | Cebus_capucinus |
ENSG00000154548 | SRSF12 | 100 | 100.000 | ENSCATG00000030620 | SRSF12 | 100 | 100.000 | Cercocebus_atys |
ENSG00000154548 | SRSF12 | 92 | 98.326 | ENSCLAG00000013868 | SRSF12 | 100 | 98.326 | Chinchilla_lanigera |
ENSG00000154548 | SRSF12 | 100 | 99.237 | ENSCSAG00000017325 | SRSF12 | 100 | 99.237 | Chlorocebus_sabaeus |
ENSG00000154548 | SRSF12 | 77 | 94.089 | ENSCHOG00000013911 | SRSF12 | 100 | 94.089 | Choloepus_hoffmanni |
ENSG00000154548 | SRSF12 | 92 | 99.170 | ENSCANG00000038708 | SRSF12 | 100 | 99.170 | Colobus_angolensis_palliatus |
ENSG00000154548 | SRSF12 | 92 | 90.795 | ENSCGRG00000017064 | Srsf12 | 100 | 90.795 | Cricetulus_griseus_crigri |
ENSG00000154548 | SRSF12 | 73 | 53.333 | ENSDARG00000112572 | CR293507.1 | 97 | 84.483 | Danio_rerio |
ENSG00000154548 | SRSF12 | 92 | 72.803 | ENSETEG00000001386 | SRSF12 | 100 | 72.803 | Echinops_telfairi |
ENSG00000154548 | SRSF12 | 54 | 72.727 | ENSEBUG00000007679 | SRSF12 | 50 | 75.000 | Eptatretus_burgeri |
ENSG00000154548 | SRSF12 | 100 | 98.092 | ENSEASG00005005686 | SRSF12 | 100 | 98.092 | Equus_asinus_asinus |
ENSG00000154548 | SRSF12 | 100 | 98.851 | ENSECAG00000019135 | SRSF12 | 100 | 98.851 | Equus_caballus |
ENSG00000154548 | SRSF12 | 100 | 95.420 | ENSEEUG00000011026 | SRSF12 | 100 | 95.420 | Erinaceus_europaeus |
ENSG00000154548 | SRSF12 | 100 | 97.701 | ENSFCAG00000029256 | SRSF12 | 100 | 97.701 | Felis_catus |
ENSG00000154548 | SRSF12 | 92 | 98.326 | ENSFDAG00000003699 | SRSF12 | 100 | 98.326 | Fukomys_damarensis |
ENSG00000154548 | SRSF12 | 92 | 100.000 | ENSGGOG00000024850 | SRSF12 | 97 | 100.000 | Gorilla_gorilla |
ENSG00000154548 | SRSF12 | 100 | 97.318 | ENSHGLG00000001138 | SRSF12 | 100 | 97.318 | Heterocephalus_glaber_female |
ENSG00000154548 | SRSF12 | 92 | 97.490 | ENSHGLG00100005391 | SRSF12 | 82 | 97.490 | Heterocephalus_glaber_male |
ENSG00000154548 | SRSF12 | 73 | 46.667 | ENSHCOG00000008417 | - | 67 | 79.310 | Hippocampus_comes |
ENSG00000154548 | SRSF12 | 73 | 53.333 | ENSIPUG00000023118 | - | 66 | 72.464 | Ictalurus_punctatus |
ENSG00000154548 | SRSF12 | 100 | 97.328 | ENSSTOG00000007170 | SRSF12 | 100 | 97.328 | Ictidomys_tridecemlineatus |
ENSG00000154548 | SRSF12 | 73 | 50.000 | ENSLBEG00000012669 | - | 88 | 81.034 | Labrus_bergylta |
ENSG00000154548 | SRSF12 | 91 | 69.231 | ENSLACG00000004376 | SRSF12 | 88 | 69.231 | Latimeria_chalumnae |
ENSG00000154548 | SRSF12 | 92 | 97.510 | ENSLAFG00000005458 | SRSF12 | 100 | 97.510 | Loxodonta_africana |
ENSG00000154548 | SRSF12 | 100 | 100.000 | ENSMFAG00000036543 | SRSF12 | 100 | 100.000 | Macaca_fascicularis |
ENSG00000154548 | SRSF12 | 100 | 99.237 | ENSMMUG00000014941 | SRSF12 | 100 | 99.237 | Macaca_mulatta |
ENSG00000154548 | SRSF12 | 100 | 100.000 | ENSMNEG00000030957 | SRSF12 | 100 | 100.000 | Macaca_nemestrina |
ENSG00000154548 | SRSF12 | 92 | 98.755 | ENSMLEG00000042204 | SRSF12 | 100 | 98.755 | Mandrillus_leucophaeus |
ENSG00000154548 | SRSF12 | 71 | 51.724 | ENSMAMG00000008111 | - | 83 | 83.636 | Mastacembelus_armatus |
ENSG00000154548 | SRSF12 | 97 | 90.514 | ENSMAUG00000017845 | Srsf12 | 96 | 90.083 | Mesocricetus_auratus |
ENSG00000154548 | SRSF12 | 73 | 66.667 | ENSMAUG00000009812 | - | 100 | 76.543 | Mesocricetus_auratus |
ENSG00000154548 | SRSF12 | 100 | 97.701 | ENSMICG00000034783 | SRSF12 | 100 | 97.701 | Microcebus_murinus |
ENSG00000154548 | SRSF12 | 100 | 91.188 | ENSMOCG00000006973 | Srsf12 | 100 | 91.188 | Microtus_ochrogaster |
ENSG00000154548 | SRSF12 | 73 | 50.000 | ENSMMOG00000013350 | - | 83 | 82.759 | Mola_mola |
ENSG00000154548 | SRSF12 | 94 | 82.520 | ENSMODG00000018282 | SRSF12 | 98 | 82.158 | Monodelphis_domestica |
ENSG00000154548 | SRSF12 | 100 | 88.889 | MGP_CAROLIEiJ_G0025873 | - | 100 | 88.889 | Mus_caroli |
ENSG00000154548 | SRSF12 | 100 | 89.655 | ENSMUSG00000054679 | Srsf12 | 100 | 89.655 | Mus_musculus |
ENSG00000154548 | SRSF12 | 100 | 89.655 | MGP_PahariEiJ_G0023996 | - | 100 | 89.655 | Mus_pahari |
ENSG00000154548 | SRSF12 | 100 | 89.655 | MGP_SPRETEiJ_G0026822 | - | 100 | 89.655 | Mus_spretus |
ENSG00000154548 | SRSF12 | 92 | 95.142 | ENSMLUG00000001545 | SRSF12 | 100 | 95.142 | Myotis_lucifugus |
ENSG00000154548 | SRSF12 | 100 | 91.188 | ENSNGAG00000019092 | Srsf12 | 93 | 92.975 | Nannospalax_galili |
ENSG00000154548 | SRSF12 | 73 | 53.333 | ENSNBRG00000010616 | - | 83 | 86.207 | Neolamprologus_brichardi |
ENSG00000154548 | SRSF12 | 92 | 99.170 | ENSNLEG00000032347 | SRSF12 | 100 | 99.170 | Nomascus_leucogenys |
ENSG00000154548 | SRSF12 | 92 | 92.500 | ENSOPRG00000016052 | SRSF12 | 100 | 92.500 | Ochotona_princeps |
ENSG00000154548 | SRSF12 | 100 | 91.985 | ENSODEG00000009174 | - | 100 | 91.985 | Octodon_degus |
ENSG00000154548 | SRSF12 | 73 | 63.333 | ENSODEG00000000894 | - | 81 | 85.455 | Octodon_degus |
ENSG00000154548 | SRSF12 | 73 | 66.667 | ENSODEG00000003118 | - | 90 | 85.938 | Octodon_degus |
ENSG00000154548 | SRSF12 | 95 | 96.787 | ENSOCUG00000000945 | SRSF12 | 100 | 96.787 | Oryctolagus_cuniculus |
ENSG00000154548 | SRSF12 | 92 | 95.000 | ENSOGAG00000006421 | SRSF12 | 100 | 95.000 | Otolemur_garnettii |
ENSG00000154548 | SRSF12 | 100 | 93.130 | ENSPPAG00000041573 | SRSF12 | 99 | 93.846 | Pan_paniscus |
ENSG00000154548 | SRSF12 | 100 | 97.701 | ENSPPRG00000018838 | SRSF12 | 100 | 97.701 | Panthera_pardus |
ENSG00000154548 | SRSF12 | 100 | 100.000 | ENSPTRG00000018415 | SRSF12 | 100 | 100.000 | Pan_troglodytes |
ENSG00000154548 | SRSF12 | 100 | 99.237 | ENSPANG00000016731 | SRSF12 | 100 | 99.237 | Papio_anubis |
ENSG00000154548 | SRSF12 | 73 | 53.333 | ENSPKIG00000000613 | - | 65 | 84.483 | Paramormyrops_kingsleyae |
ENSG00000154548 | SRSF12 | 63 | 76.923 | ENSPEMG00000021564 | - | 85 | 86.885 | Peromyscus_maniculatus_bairdii |
ENSG00000154548 | SRSF12 | 100 | 89.272 | ENSPEMG00000006893 | Srsf12 | 100 | 89.272 | Peromyscus_maniculatus_bairdii |
ENSG00000154548 | SRSF12 | 100 | 79.310 | ENSPCIG00000021713 | SRSF12 | 96 | 83.750 | Phascolarctos_cinereus |
ENSG00000154548 | SRSF12 | 100 | 96.565 | ENSPPYG00000016837 | SRSF12 | 100 | 96.565 | Pongo_abelii |
ENSG00000154548 | SRSF12 | 100 | 78.244 | ENSPCAG00000010020 | SRSF12 | 100 | 78.244 | Procavia_capensis |
ENSG00000154548 | SRSF12 | 100 | 96.565 | ENSPCOG00000001227 | SRSF12 | 100 | 96.565 | Propithecus_coquereli |
ENSG00000154548 | SRSF12 | 92 | 97.500 | ENSPVAG00000001046 | SRSF12 | 100 | 97.500 | Pteropus_vampyrus |
ENSG00000154548 | SRSF12 | 73 | 53.333 | ENSPNAG00000009501 | - | 88 | 82.759 | Pygocentrus_nattereri |
ENSG00000154548 | SRSF12 | 100 | 83.525 | ENSRNOG00000051383 | Srsf12 | 100 | 78.544 | Rattus_norvegicus |
ENSG00000154548 | SRSF12 | 92 | 100.000 | ENSRBIG00000029756 | SRSF12 | 97 | 100.000 | Rhinopithecus_bieti |
ENSG00000154548 | SRSF12 | 99 | 100.000 | ENSRROG00000035967 | SRSF12 | 100 | 100.000 | Rhinopithecus_roxellana |
ENSG00000154548 | SRSF12 | 92 | 92.885 | ENSSBOG00000032399 | SRSF12 | 100 | 92.885 | Saimiri_boliviensis_boliviensis |
ENSG00000154548 | SRSF12 | 54 | 72.727 | ENSSLDG00000002710 | - | 93 | 82.759 | Seriola_lalandi_dorsalis |
ENSG00000154548 | SRSF12 | 92 | 97.510 | ENSSARG00000007795 | SRSF12 | 100 | 97.510 | Sorex_araneus |
ENSG00000154548 | SRSF12 | 92 | 79.079 | ENSSPUG00000001194 | SRSF12 | 88 | 79.079 | Sphenodon_punctatus |
ENSG00000154548 | SRSF12 | 56 | 82.609 | ENSSPUG00000016216 | - | 96 | 82.812 | Sphenodon_punctatus |
ENSG00000154548 | SRSF12 | 73 | 50.000 | ENSSPAG00000001821 | - | 83 | 82.759 | Stegastes_partitus |
ENSG00000154548 | SRSF12 | 100 | 98.467 | ENSSSCG00000032781 | SRSF12 | 100 | 98.467 | Sus_scrofa |
ENSG00000154548 | SRSF12 | 73 | 50.000 | ENSTRUG00000019904 | - | 79 | 82.759 | Takifugu_rubripes |
ENSG00000154548 | SRSF12 | 92 | 92.887 | ENSTBEG00000008665 | - | 100 | 92.887 | Tupaia_belangeri |
ENSG00000154548 | SRSF12 | 59 | 96.774 | ENSTBEG00000015120 | - | 100 | 96.774 | Tupaia_belangeri |
ENSG00000154548 | SRSF12 | 100 | 91.985 | ENSTTRG00000003682 | SRSF12 | 100 | 91.985 | Tursiops_truncatus |
ENSG00000154548 | SRSF12 | 98 | 90.310 | ENSUMAG00000010534 | SRSF12 | 98 | 90.310 | Ursus_maritimus |
ENSG00000154548 | SRSF12 | 100 | 91.603 | ENSVPAG00000004175 | SRSF12 | 100 | 91.603 | Vicugna_pacos |
ENSG00000154548 | SRSF12 | 95 | 95.161 | ENSVVUG00000010197 | SRSF12 | 99 | 95.161 | Vulpes_vulpes |
ENSG00000154548 | SRSF12 | 99 | 71.698 | ENSXETG00000005385 | srsf12 | 90 | 71.660 | Xenopus_tropicalis |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0000244 | spliceosomal tri-snRNP complex assembly | 11684676. | NAS | Process |
GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | 21873635. | IBA | Process |
GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | 11684676. | IDA | Process |
GO:0000395 | mRNA 5'-splice site recognition | 21873635. | IBA | Process |
GO:0000395 | mRNA 5'-splice site recognition | 11684676. | IDA | Process |
GO:0003723 | RNA binding | 22681889. | HDA | Function |
GO:0003723 | RNA binding | 21873635. | IBA | Function |
GO:0003723 | RNA binding | 11684676. | NAS | Function |
GO:0005634 | nucleus | 21873635. | IBA | Component |
GO:0005654 | nucleoplasm | 11684676. | ISS | Component |
GO:0016607 | nuclear speck | 21873635. | IBA | Component |
GO:0045292 | mRNA cis splicing, via spliceosome | 21873635. | IBA | Process |
GO:0048025 | negative regulation of mRNA splicing, via spliceosome | 11684676. | ISS | Process |
GO:0050733 | RS domain binding | 11684676. | NAS | Function |
GO:0051082 | unfolded protein binding | 11684676. | NAS | Function |