EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
24391143Kinesin family deregulation coordinated by bromodomain protein ANCCA and histone methyltransferase MLL for breast cancer cell growth, survival, and tamoxifen resistance.Mol Cancer Res2014 AprZou JXdoi: 10.1158/1541-7786.MCR-13-0459
20374707The roles and action mechanisms of p160/SRC coactivators and the ANCCA coregulator in cancer.Prog Mol Biol Transl Sci2009Hsia EYdoi: 10.1016/S1877-1173(09)87008-7
19318566Androgen-induced coactivator ANCCA mediates specific androgen receptor signaling in prostate cancer.Cancer Res2009 Apr 15Zou JXdoi: 10.1158/0008-5472.CAN-08-3440
25813398Oncogene ATAD2 promotes cell proliferation, invasion and migration in cervical cancer.Oncol Rep2015 MayZheng Ldoi: 10.3892/or.2015.3867
26527032ATAD2 is overexpressed in gastric cancer and serves as an independent poor prognostic biomarker.Clin Transl Oncol2016 AugZhang Mdoi: 10.1007/s12094-015-1430-8
17998543ANCCA, an estrogen-regulated AAA+ ATPase coactivator for ERalpha, is required for coregulator occupancy and chromatin modification.Proc Natl Acad Sci U S A2007 Nov 13Zou JX-
20864510ANCCA/ATAD2 overexpression identifies breast cancer patients with poor prognosis, acting to drive proliferation and survival of triple-negative cells through control of B-Myb and EZH2.Cancer Res2010 Nov 15Kalashnikova EVdoi: 10.1158/0008-5472.CAN-10-1199
26308378ATAD2 overexpression links to enrichment of B-MYB-translational signatures and development of aggressive endometrial carcinoma.Oncotarget2015 Sep 29Krakstad Cdoi: 10.18632/oncotarget.4955.
26819280ATAD2 overexpression is associated with progression and prognosis in colorectal cancer.Jpn J Clin Oncol2016 MarHou Mdoi: 10.1093/jjco/hyv195
27612420ATAD2 is an epigenetic reader of newly synthesized histone marks during DNA replication.Oncotarget2016 Oct 25Koo SJdoi: 10.18632/oncotarget.11855.
28591577Androgen Receptor Deregulation Drives Bromodomain-Mediated Chromatin Alterations in Prostate Cancer.Cell Rep2017 Jun 6Urbanucci Adoi: 10.1016/j.celrep.2017.05.049.
27565322Silencing of ATPase family AAA domain-containing protein 2 inhibits migration and invasion of colorectal cancer cells.Neoplasma2016Hong S-
29958090ATAD2 silencing decreases VEGFA secretion through targeting has-miR-520a to inhibit angiogenesis in colorectal cancer.Biochem Cell Biol2018 DecHong Sdoi: 10.1139/bcb-2018-0081

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr8123369936Silentrs148244463D272D0.07
BLCAchr8123347139Missense_MutationnovelR722T0.13
BLCAchr8123348195Nonsense_MutationnovelE629*0.08
BLCAchr8123359285Missense_MutationNAE440Q0.19
BLCAchr8123359237Nonsense_MutationNAK456*0.39
BLCAchr8123339440Missense_MutationnovelE909K0.28
BLCAchr8123325904Missense_MutationnovelE1331K0.31
BLCAchr8123371268Missense_MutationNAE203Q0.2
BLCAchr8123339447Splice_SitenovelX907_splice0.14
BLCAchr8123369962Missense_MutationnovelD264N0.68
BLCAchr8123359657Missense_MutationNAE396K0.08
BLCAchr8123370004Missense_Mutationrs141752094D250N0.5
BLCAchr8123344787Intronnovel0.17
BLCAchr8123322958Missense_MutationNAD1371Y0.37
BLCAchr8123333950Missense_MutationNAD1136N0.17
BLCAchr8123336529Missense_MutationnovelP1019S0.29
BLCAchr8123336526Missense_MutationnovelD1020H0.21
BLCAchr8123371690SilentNAL172L0.14
BLCAchr8123369938Missense_MutationNAD272H0.19
BLCAchr8123333940Nonsense_MutationnovelS1139*0.16
BLCAchr8123339440Missense_MutationnovelE909Q0.15
BLCAchr8123369151Missense_MutationnovelN319S0.21
BLCAchr8123370016Missense_MutationNAE246K0.55
BLCAchr8123357737Splice_SitenovelX461_splice0.37
BLCAchr8123345063Missense_MutationnovelR847G0.36
BLCAchr8123380635Missense_MutationnovelR72S0.23
BLCAchr8123346679Missense_MutationnovelG762R0.29
BLCAchr8123328463Missense_Mutationrs763830616E1199K0.17
BLCAchr8123396348Missense_MutationnovelL4F0.28
BLCAchr8123348083Intronnovel0.38
BLCAchr8123328341Missense_MutationnovelL1239F0.23
BRCAchr8123349329Missense_MutationnovelG588S0.13
BRCAchr8123347282SilentnovelI674I0.05
BRCAchr8123371776Missense_MutationnovelH144N0.42
BRCAchr8123369174Splice_RegionNAK311K0.13
BRCAchr8123339333SilentNAP944P0.21
BRCAchr8123347115Missense_MutationNAR730K0.12
BRCAchr8123328290SilentNAR1256R0.27
BRCAchr8123371268Missense_MutationNAE203K0.2
BRCAchr81234007935'Flanknovel0.18
BRCAchr8123346226Missense_MutationnovelV798I0.04
BRCAchr8123359222Nonsense_MutationnovelY448*0.06
BRCAchr8123359654SilentnovelL397L0.06
BRCAchr8123339332Missense_MutationNAP945A0.13
BRCAchr8123361597Nonsense_MutationNAE367*0.15
BRCAchr8123348223SilentNAP619P0.21
BRCAchr8123336400Nonsense_MutationnovelE1062*0.07
BRCAchr8123344804Intronnovel0.56
BRCAchr8123371739Missense_MutationNAR156Q0.15
BRCAchr8123346137Missense_MutationnovelI827M0.4
BRCAchr8123334289Missense_MutationNAR1082T0.59
BRCAchr8123359600Missense_MutationNAD415H0.25
BRCAchr8123346230SilentNAL796L0.2
BRCAchr8123349320Missense_MutationnovelD591H0.18
CESCchr81234007055'Flanknovel0.29
CESCchr8123349400Missense_MutationnovelS564N0.36
CESCchr81234007985'Flanknovel0.22
CESCchr8123346222Missense_MutationnovelG799A0.21
CESCchr8123369905Missense_MutationNAE283K0.36
CESCchr8123328511Missense_MutationnovelI1183L0.07
CESCchr8123328512In_Frame_InsnovelK1182delinsNSSL0.08
CESCchr8123337773Missense_MutationnovelR968T0.24
CESCchr8123349393Frame_Shift_InsnovelE567Wfs*120.08
CESCchr8123349369Silentrs201340625T574T0.11
CESCchr8123370924Missense_MutationNAD236N0.18
CESCchr8123347246Missense_MutationnovelM686I0.08
CESCchr81233207003'UTRnovel0.52
CESCchr8123334320Missense_MutationnovelR1072C0.38
CESCchr8123337663Nonsense_MutationnovelR1005*0.34
CESCchr8123347386Missense_MutationnovelK640E0.36
CESCchr8123348216Missense_MutationnovelT622A0.35
CESCchr8123347141SilentNAQ721Q0.23
CESCchr8123361617Missense_Mutationrs761504959S360L0.18
CESCchr81233211183'UTRrs7650198400.15
CESCchr8123333886Missense_MutationnovelS1157N0.42
CESCchr8123369085Missense_MutationNAR341K0.39
CESCchr8123371749Missense_MutationnovelE153Q0.15
COADchr8123357591Missense_MutationnovelE510K0.15
COADchr8123359224Frame_Shift_DelnovelP460Qfs*320.42
COADchr8123334227Nonsense_MutationnovelE1103*0.08
COADchr8123356441Missense_MutationnovelE532K0.09
COADchr8123361572Missense_Mutationrs575694809R375Q0.2
COADchr8123359657Nonsense_MutationNAE396*0.39
COADchr8123357695Frame_Shift_Delrs748411494L475Gfs*80.29
COADchr8123371235Splice_SiteNAX213_splice0.23
COADchr8123357579Nonsense_MutationNAR514*0.1
COADchr81234011455'Flanknovel0.2
COADchr81234009235'Flankrs5611227900.24
COADchr8123323046SilentNAV1341V0.13
COADchr81234009815'Flanknovel0.54
COADchr8123337683Missense_Mutationrs748172134H998R0.33
COADchr8123369955In_Frame_Delrs777301503E263_D265del0.41
COADchr8123347234SilentnovelS690S0.38
COADchr8123349314Nonsense_MutationNAE593*0.37
COADchr8123370993Splice_RegionNA0.26
COADchr81234009235'Flankrs5611227900.6
COADchr8123328250Missense_MutationNAC1270R0.2
COADchr8123371238Nonsense_MutationNAE213*0.25
COADchr8123323062Missense_MutationnovelL1336P0.54
COADchr8123356465Missense_Mutationrs778430144R524C0.2
COADchr8123371814Missense_Mutationrs750708802R131Q0.13
COADchr8123346743SilentnovelS740S0.05
DLBCchr8123344866Intronnovel0.06
ESCAchr8123345052Missense_Mutationrs760609188K850N0.07
ESCAchr8123347383Missense_MutationnovelS641P0.59
ESCAchr8123356435Missense_MutationnovelD534H0.11
ESCAchr8123323038Frame_Shift_Insrs775812316S1344Kfs*280.32
ESCAchr8123344965SilentnovelT879T0.12
ESCAchr8123321164SilentnovelQ1381Q0.08
ESCAchr8123372653Frame_Shift_Delrs746676748E119Kfs*80.44
ESCAchr8123346152SilentnovelV822V0.42
GBMchr8123369899Missense_MutationNAD285N0.35
GBMchr81233210033'UTRnovel0.34
GBMchr8123357662Missense_Mutationrs199759840Q486R0.2
GBMchr81234007025'Flanknovel0.15
GBMchr8123337745SilentnovelR977R0.11
GBMchr8123328471Missense_MutationnovelH1196R0.05
GBMchr8123322970Missense_MutationNAR1367C0.06
GBMchr8123346663Missense_MutationnovelS767Y0.14
GBMchr8123348034IntronNA0.15
GBMchr8123346229Missense_MutationNAI797V0.41
HNSCchr8123347113Missense_MutationnovelT731A0.14
HNSCchr81234010775'Flanknovel0.15
HNSCchr8123359632Missense_Mutationrs528861654R404Q0.16
HNSCchr8123369988Missense_MutationnovelD255V0.59
HNSCchr8123336526Missense_MutationnovelD1020H0.09
HNSCchr8123347174SilentnovelQ710Q0.38
HNSCchr8123337627Missense_MutationnovelE1017K0.18
HNSCchr8123333906Silentrs147456124P1150P0.39
HNSCchr8123328402Missense_MutationnovelG1219E0.22
KIRCchr8123328566Missense_MutationnovelR1164S0.28
KIRCchr8123347311Frame_Shift_InsnovelL665Cfs*240.08
KIRCchr8123361607In_Frame_InsnovelS366dup0.19
LGGchr8123347322Missense_MutationNAT661S0.22
LGGchr8123328323SilentnovelT1245T0.36
LGGchr8123356417Missense_MutationNAR540W0.08
LIHCchr8123370992Splice_SitenovelX214_splice0.52
LIHCchr8123328425Missense_MutationnovelD1211E0.41
LIHCchr8123371292Missense_MutationnovelR195C0.36
LIHCchr8123344689Intronnovel0.17
LIHCchr81233963655'UTRnovel0.78
LIHCchr8123357683Missense_MutationnovelA479V0.18
LIHCchr8123328208Missense_MutationNAD1284N0.25
LIHCchr8123328514Frame_Shift_InsnovelK1182Lfs*230.14
LIHCchr8123359639Missense_MutationnovelK402E0.17
LIHCchr8123359641Nonsense_MutationnovelY401*0.17
LIHCchr8123349352Missense_MutationnovelI580T0.15
LIHCchr8123322982Missense_MutationnovelI1363V0.81
LIHCchr8123369935Missense_MutationNAD273H0.06
LIHCchr8123396328Silentrs760726039L10L0.06
LIHCchr8123349430Missense_MutationNAT554I0.52
LIHCchr81234006795'Flanknovel0.17
LUADchr8123369164Nonsense_MutationNAQ315*0.12
LUADchr81234010485'FlankNA0.11
LUADchr81234010915'FlankNA0.23
LUADchr8123359227Missense_MutationnovelP459H0.05
LUADchr8123349403Missense_MutationNAD563G0.14
LUADchr8123321135SilentNA*1391*0.08
LUADchr8123359255Missense_MutationnovelE450K0.1
LUADchr8123349287Frame_Shift_InsnovelE602Kfs*80.29
LUADchr8123346670Missense_MutationnovelQ765E0.07
LUADchr8123346207Missense_MutationNAG804V0.37
LUADchr81234011705'FlankNA0.04
LUADchr8123337695Missense_MutationNAR994I0.25
LUADchr8123371291Missense_MutationNAR195L0.12
LUADchr8123371814Missense_MutationNAR131L0.24
LUADchr8123344869Intronnovel0.13
LUADchr8123344870Intronnovel0.13
LUADchr8123396344Missense_MutationNAR5L0.15
LUADchr8123357599Missense_MutationnovelG507V0.38
LUADchr8123356458Nonsense_MutationnovelS526*0.16
LUADchr8123347400Missense_MutationnovelC635F0.21
LUADchr8123371814Missense_MutationnovelR131P0.25
LUADchr8123349287Missense_MutationNAE602Q0.17
LUADchr8123359285Missense_MutationNAE440Q0.05
LUADchr8123370903Nonsense_MutationnovelE243*0.08
LUSCchr8123347189Silentrs779486498V705V0.34
LUSCchr8123357696SilentnovelL475L0.35
LUSCchr8123361639Frame_Shift_InsnovelH353Tfs*60.07
LUSCchr8123361641Frame_Shift_InsnovelR352Nfs*490.07
LUSCchr8123396308Nonsense_MutationNAS17*0.12
LUSCchr8123328555Missense_MutationnovelK1168R0.29
LUSCchr8123396291Missense_MutationNAD23Y0.33
LUSCchr8123346212SilentnovelG802G0.32
LUSCchr81233964505'UTRnovel0.23
LUSCchr8123396274Silentrs138728114F28F0.35
LUSCchr8123371803Missense_Mutationrs761965716A135T0.4
LUSCchr8123369095Missense_MutationnovelA338S0.28
LUSCchr8123348267Missense_MutationnovelK605E0.27
LUSCchr8123348270Missense_MutationnovelR604G0.53
LUSCchr8123337645Nonsense_MutationNAK1011*0.22
LUSCchr81234010315'Flanknovel0.26
LUSCchr8123357594Missense_MutationNAS509T0.35
LUSCchr8123346631Missense_MutationNAL778F0.38
LUSCchr8123347266Nonsense_MutationnovelE680*0.48
LUSCchr8123347210Frame_Shift_DelnovelQ699Rfs*70.19
LUSCchr8123333927Missense_MutationnovelQ1143H0.27
LUSCchr8123347098Missense_MutationNAD736H0.17
LUSCchr8123369821Missense_MutationNAK311Q0.26
LUSCchr81234008745'Flanknovel0.09
LUSCchr81233210793'UTRnovel0.55
LUSCchr8123371724Missense_MutationnovelR161I0.07
LUSCchr8123328266Missense_MutationNAL1264F0.15
LUSCchr8123369112Missense_MutationnovelR332T0.11
LUSCchr8123337669Missense_MutationNAD1003H0.07
LUSCchr8123323038Frame_Shift_Insrs775812316S1344Kfs*280.16
OVchr8123361625Missense_MutationnovelS357R0.08
OVchr8123337636Missense_MutationNAD1014H0.22
OVchr8123349347Missense_MutationNAP582T0.23
OVchr8123344913Missense_MutationNAD897H0.17
OVchr8123336424Missense_MutationNAD1054H0.13
OVchr8123322970Missense_MutationNAR1367C0.05
OVchr8123325946Missense_MutationnovelA1317T0.05
PAADchr81234007685'Flanknovel0.18
PAADchr8123336388Missense_MutationnovelD1066H0.15
PRADchr8123344812Intronnovel0.09
PRADchr8123337821Splice_SitenovelX952_splice0.17
PRADchr8123371743Missense_Mutationrs755251005R155C0.32
PRADchr8123346210Nonsense_MutationnovelF803*0.09
READchr8123371251SilentNAF208F0.29
READchr8123369060Missense_MutationNAN349K0.3
READchr8123371724Missense_MutationnovelR161I0.04
READchr8123336400Nonsense_MutationnovelE1062*0.35
READchr8123337746Missense_Mutationrs759693662R977Q0.36
READchr8123344947SilentnovelP885P0.38
READchr8123328240Missense_MutationnovelD1273A0.08
READchr8123337662Missense_Mutationrs768509548R1005Q0.18
READchr8123371739Missense_MutationNAR156Q0.09
SARCchr8123369927Missense_Mutationrs149531312D275E0.53
SARCchr81234006925'Flanknovel0.31
SARCchr8123347235Missense_MutationnovelS690F0.47
SKCMchr8123346124Nonsense_MutationNAG832*0.07
SKCMchr8123333997Missense_MutationNAP1120L0.18
SKCMchr8123349334Missense_MutationnovelR586K0.39
SKCMchr8123348231Missense_MutationnovelP617S0.17
SKCMchr8123371792SilentNAI138I0.13
SKCMchr8123337657Nonsense_MutationNAR1007*0.26
SKCMchr8123359633Nonsense_Mutationrs558571857R404*0.16
SKCMchr8123369080Missense_MutationNAP343S0.32
SKCMchr8123328507Missense_MutationNAS1184L0.37
SKCMchr8123361601SilentnovelS365S0.54
SKCMchr8123369154Missense_MutationnovelP318L0.54
SKCMchr8123359633Nonsense_Mutationrs558571857R404*0.21
SKCMchr81234008185'Flanknovel0.39
SKCMchr8123346738Missense_MutationNAP742L0.09
SKCMchr8123356439Missense_MutationnovelE532D0.38
SKCMchr8123328411Missense_MutationNAG1216E0.17
SKCMchr8123357719Missense_MutationnovelG467A0.19
SKCMchr81234009515'Flanknovel0.12
SKCMchr8123323067Splice_SiteNAX1335_splice0.28
SKCMchr8123346237Missense_MutationNAR794K0.18
SKCMchr8123359269Missense_MutationNAP445L0.44
SKCMchr8123371824Missense_MutationNAP128S0.38
SKCMchr8123347100Nonsense_MutationNAL735*0.21
SKCMchr8123396249SilentNAR37R0.4
SKCMchr8123334274Missense_MutationnovelA1087V0.57
SKCMchr8123344912Missense_MutationNAD897G0.2
STADchr8123347343Missense_MutationNAR654H0.21
STADchr8123369960Missense_Mutationrs149848860D264E0.26
STADchr8123322969Missense_Mutationrs147449805R1367H0.15
STADchr8123339394Missense_MutationnovelP924L0.08
STADchr8123323039Frame_Shift_DelNAS1344Vfs*150.33
STADchr8123333930Missense_MutationnovelE1142D0.14
STADchr8123325977SilentNAQ1306Q0.05
STADchr8123323039Frame_Shift_DelNAS1344Vfs*150.32
STADchr81234007635'FlankNA0.15
STADchr8123347206Missense_MutationNAA700T0.23
STADchr8123328480Missense_Mutationrs756836955A1193V0.23
STADchr8123328522Frame_Shift_DelNAK1179Sfs*160.28
STADchr8123349338Nonsense_MutationNAR585*0.21
STADchr8123369166Missense_MutationNAH314R0.31
STADchr8123323045Nonsense_MutationNAK1342*0.18
STADchr8123322975Missense_Mutationrs111422836R1365Q0.23
STADchr8123349362SilentnovelL577L0.05
STADchr8123359270Missense_MutationnovelP445S0.26
STADchr8123361645Nonsense_MutationnovelR351*0.26
STADchr8123344863Intronnovel0.07
STADchr81233211183'UTRrs7650198400.11
STADchr8123371742Missense_Mutationrs749840287R155H0.2
STADchr8123344992SilentNAG870G0.07
STADchr8123359306Missense_Mutationrs200411614N433D0.27
STADchr8123359334Splice_Regionrs748345203V423V0.12
STADchr8123359287In_Frame_DelnovelL438_K439del0.16
STADchr8123359642Frame_Shift_DelnovelY401Ifs*50.14
STADchr8123346183Missense_MutationNAA812D0.12
STADchr8123359237Missense_MutationNAK456E0.16
STADchr8123336503SilentNAQ1027Q0.15
STADchr8123371244Missense_MutationnovelT211P0.16
STADchr8123334319Missense_MutationNAR1072H0.18
STADchr8123325974SilentnovelQ1307Q0.32
STADchr8123328315Missense_MutationnovelI1248T0.27
THCAchr8123361644Missense_Mutationrs750619146R351Q0.2
UCECchr8123339372Missense_MutationnovelK931N0.34
UCECchr81234009255'FlankNA0.24
UCECchr8123339411Missense_MutationNAI918M0.26
UCECchr8123359242Missense_MutationNAK454T0.31
UCECchr8123371739Missense_MutationNAR156Q0.36
UCECchr8123337714Nonsense_MutationnovelE988*0.13
UCECchr8123347096SilentnovelD736D0.2
UCECchr8123357578Missense_Mutationrs151296109R514Q0.32
UCECchr81234008185'Flanknovel0.42
UCECchr81234009835'Flanknovel0.34
UCECchr8123336528Missense_MutationnovelP1019H0.42
UCECchr81233209933'UTRnovel0.12
UCECchr8123346744Missense_MutationNAS740Y0.59
UCECchr8123347267Silentrs139532496F679F0.27
UCECchr8123348270Nonsense_MutationNAR604*0.55
UCECchr8123361558Missense_Mutationrs555718366R380C0.51
UCECchr81234008455'Flanknovel0.38
UCECchr81233211153'UTRnovel0.31
UCECchr8123345063Missense_MutationnovelR847C0.46
UCECchr8123369960SilentnovelD264D0.15
UCECchr8123372686Splice_RegionnovelR107R0.33
UCECchr8123356445Frame_Shift_Delrs778963826F530Lfs*270.63
UCECchr8123328437SilentnovelD1207D0.26
UCECchr8123337700Missense_MutationNAF992L0.46
UCECchr8123339353Missense_MutationNAL938I0.42
UCECchr8123371292Missense_MutationnovelR195C0.41
UCECchr8123359672Missense_Mutationrs752748660N391H0.33
UCECchr81234006845'Flanknovel0.44
UCECchr8123337630Missense_MutationNAD1016N0.25
UCECchr8123346640Missense_MutationNAF775V0.2
UCECchr8123347267Silentrs139532496F679F0.29
UCECchr8123346185SilentNAP811P0.52
UCECchr8123356444Frame_Shift_InsNAD531*0.54
UCECchr8123322969Missense_Mutationrs147449805R1367H0.11
UCECchr8123344989Silentrs748436000P871P0.2
UCECchr8123349308Missense_MutationNAL595I0.21
UCECchr8123359633Nonsense_Mutationrs558571857R404*0.14
UCECchr81234009825'Flanknovel0.16
UCECchr81234010435'Flanknovel0.26
UCECchr81234009235'Flankrs5611227900.24
UCECchr8123349369Silentrs201340625T574T0.15
UCECchr8123346091Missense_Mutationrs772718666A843T0.17
UCECchr8123359683Missense_MutationNAC387Y0.26
UCECchr8123323045Nonsense_MutationNAK1342*0.49
UCECchr81233208763'UTRnovel0.5
UCECchr8123323010Missense_MutationnovelE1353D0.35
UCECchr8123328394Missense_MutationnovelS1222A0.32
UCECchr81233209993'UTRnovel0.45
UCECchr8123334014SilentnovelS1114S0.62
UCECchr8123339353Missense_MutationNAL938I0.37
UCECchr8123371292Missense_MutationnovelR195C0.61
UCECchr8123333880Missense_MutationnovelP1159H0.22
UCECchr81234007075'Flanknovel0.17
UCECchr8123371336Missense_MutationnovelT180N0.22
UCECchr8123326012Nonsense_MutationnovelR1295*0.36
UCECchr8123334000Missense_MutationnovelA1119V0.24
UCECchr8123349409Missense_MutationnovelG561E0.32
UCECchr8123372671Silentrs758816583Q112Q0.32
UCECchr8123345063Missense_MutationnovelR847C0.47
UCECchr8123349314Nonsense_MutationNAE593*0.56
UCECchr8123349442Missense_MutationNAS550Y0.52
UCECchr8123357672Nonsense_MutationnovelE483*0.36
UCECchr8123359633Nonsense_Mutationrs558571857R404*0.27
UCECchr8123380598Missense_MutationnovelS84Y0.42
UCECchr8123323038Frame_Shift_Insrs775812316S1344Kfs*280.42
UCECchr8123348204Nonsense_MutationnovelE626*0.46
UCECchr8123357577SilentnovelR514R0.23
UCECchr81233209873'UTRnovel0.6
UCECchr81233211163'UTRnovel0.51
UCECchr8123337702Missense_MutationnovelF992V0.28
UCECchr8123344805Intronnovel0.36
UCECchr8123372653Frame_Shift_Delrs746676748E119Kfs*80.33
UCECchr81233208803'UTRnovel0.45
UCECchr8123345062Missense_Mutationrs78548009R847H0.37
UCECchr8123328522Frame_Shift_DelNAK1179Sfs*160.35
UCECchr8123349442Missense_MutationNAS550Y0.51
UCECchr8123371313Frame_Shift_DelnovelM188Wfs*40.19
UCECchr8123348131Intronnovel0.19
UCECchr8123357579Nonsense_MutationNAR514*0.09
UCECchr8123359250SilentnovelV451V0.28
UCECchr81234008185'Flanknovel0.16
UCECchr8123369096Silentrs201958673S337S0.45
UCECchr8123357619Frame_Shift_InsNAD500Efs*50.28
UCECchr81234007175'Flanknovel0.26
UCECchr8123333997Missense_MutationNAP1120L0.31
UCECchr81233210813'UTRnovel0.49
UCECchr8123347355Missense_MutationnovelA650D0.56
UCECchr81234007635'FlankNA0.46
UCECchr8123347299Missense_MutationnovelL669I0.41
UCECchr8123371739Missense_MutationNAR156Q0.27
UCECchr81233209413'UTRnovel0.23
UCECchr8123334263Nonsense_MutationNAE1091*0.28
UCECchr8123339348Missense_MutationnovelK939N0.07
UCECchr8123344945Nonsense_MutationNAS886*0.34
UCECchr8123349442Missense_MutationNAS550Y0.24
UCECchr8123370944Missense_MutationnovelR229I0.17
UCECchr8123344686Intronnovel0.23
UCECchr8123346745Missense_MutationnovelS740P0.35
UCECchr8123369875Nonsense_MutationnovelR293*0.19
UCECchr8123359619Frame_Shift_InsnovelA409Ifs*120.06
UCECchr8123359621Frame_Shift_InsnovelG408Sfs*140.02
UCECchr8123359646Silentrs572210705G399G0.19
UCECchr8123334319Missense_MutationNAR1072H0.29
UCECchr8123359665Missense_MutationNAR393Q0.17
UCECchr8123337657Nonsense_MutationNAR1007*0.39
UCECchr8123349425SilentNAL556L0.18
UCECchr8123328362SilentNAA1232A0.25
UCECchr8123371791Missense_Mutationrs763753239V139I0.28
UCECchr8123328330Nonsense_MutationnovelS1243*0.14
UCECchr8123369993SilentnovelH253H0.36
UCECchr8123371771SilentnovelL145L0.21
UCECchr8123380550Missense_MutationnovelA100V0.36
UCECchr8123369936Silentrs148244463D272D0.23
UCECchr8123347287Missense_MutationNAN673H0.48
UCECchr8123371283Nonsense_MutationNAR198*0.39
UCECchr8123334320Missense_MutationnovelR1072C0.08
UCECchr8123372653Frame_Shift_Delrs746676748E119Kfs*80.42
UCECchr8123356441Missense_MutationnovelE532K0.21
UCECchr8123322970Missense_MutationNAR1367C0.34
UCECchr8123325915Missense_MutationnovelV1327A0.3
UCECchr8123371739Missense_MutationNAR156Q0.34
UCECchr81234007635'FlankNA0.29
UCECchr8123336452SilentnovelL1044L0.45
UCECchr8123348086Intronnovel0.38
UCECchr8123369095Missense_Mutationrs376155752A338T0.3
UCECchr8123369958Missense_MutationnovelD265G0.4
UCECchr8123339370Missense_MutationnovelF932C0.51
UCECchr8123349442Missense_MutationNAS550Y0.37
UCECchr81234008175'Flankrs5449448060.33
UCECchr81234010655'Flanknovel0.13
UCECchr8123323038Frame_Shift_Insrs775812316S1344Kfs*280.36
UCECchr81233210963'UTRnovel0.37
UCECchr8123337663Nonsense_MutationnovelR1005*0.39
UCECchr8123336391Missense_MutationnovelP1065S0.07
UCECchr8123372653Frame_Shift_Delrs746676748E119Kfs*80.45
UCSchr8123344836Intronnovel0.36
UCSchr8123346243Missense_MutationNAR792Q0.25

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCAMP0.20830.018626
KIRCAMP0.11740.15559
LGGAMP0.17156.7949e-16
LIHCAMP0.60811.1795e-21
SARCAMP0.26850.18425
SKCMAMP0.46052.8957e-05
TGCTAMP0.58670.13696
THCADEL0.010.038162
UVMAMP0.73758.8879e-13

Survival Analysis
CancerP-value Q-value
THYM0.0044

Kaplan-Meier Survival Analysis

KIRC0.0058

Kaplan-Meier Survival Analysis

STAD0.018

Kaplan-Meier Survival Analysis

SARC0.0078

Kaplan-Meier Survival Analysis

MESO0.00013

Kaplan-Meier Survival Analysis

ACC0.00011

Kaplan-Meier Survival Analysis

PRAD0.013

Kaplan-Meier Survival Analysis

KIRP0.00011

Kaplan-Meier Survival Analysis

PAAD0.02

Kaplan-Meier Survival Analysis

PCPG0.012

Kaplan-Meier Survival Analysis

KICH0.0017

Kaplan-Meier Survival Analysis

UCEC0.0001

Kaplan-Meier Survival Analysis

LIHC0.049

Kaplan-Meier Survival Analysis

LGG0.0001

Kaplan-Meier Survival Analysis

LUAD0.0023

Kaplan-Meier Survival Analysis

UVM0.0098

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000156802 (Gene tree)
Gene ID
29028
Gene Symbol
ATAD2
Alias
PRO2000|DKFZp667N1320|MGC5254|MGC29843|CT137|ANCCA
Full Name
ATPase family AAA domain containing 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
96,501 bases
Position
chr8:123,319,850-123,416,350
Accession
30123
RBP type
non-canonical RBP
Summary
A large family of ATPases has been described, whose key feature is that they share a conserved region of about 220 amino acids that contains an ATP-binding site. The proteins that belong to this family either contain one or two AAA (ATPases Associated with diverse cellular Activities) domains. AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes. The protein encoded by this gene contains two AAA domains, as well as a bromodomain. [provided by RefSeq, Jul 2008]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000550993ATAD2-208438--- (aa)--
ENST00000517666ATAD2-2024995-ENSP0000042933164 (aa)-E5RIP2
ENST00000530065ATAD2-206411--- (aa)--
ENST00000519124ATAD2-2034650-ENSP0000042961763 (aa)-E5RHW7
ENST00000521496ATAD2-2043133--- (aa)--
ENST00000534257ATAD2-207544--- (aa)--
ENST00000287394ATAD2-2015565XM_011516994ENSP000002873941390 (aa)XP_011515296Q6PL18
ENST00000521903ATAD2-2055143XM_011516996ENSP00000429213708 (aa)XP_011515298A0A0B4J211
Gene Model
Click here to download ENSG00000156802's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000156802Blood Pressure6.8764642E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000156802's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000156802ATAD29647.818ENSMUSG00000052812Atad2b9452.823Mus_musculus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003682chromatin binding21873635.IBAFunction
GO:0005515protein binding17998543.25640309.IPIFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0006325chromatin organization-IEAProcess
GO:0006357regulation of transcription by RNA polymerase II-TASProcess
GO:0016887ATPase activity21873635.IBAFunction
GO:0016887ATPase activity17998543.IDAFunction
GO:0031936negative regulation of chromatin silencing21873635.IBAProcess
GO:0042393histone binding21873635.IBAFunction
GO:0045893positive regulation of transcription, DNA-templated17998543.IDAProcess
GO:0045944positive regulation of transcription by RNA polymerase II21873635.IBAProcess
GO:0070062extracellular exosome19056867.HDAComponent
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