EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
25281386	The RNA-binding protein RBPMS1 represses AP-1 signaling and regulates breast cancer cell proliferation and migration.	Biochim Biophys Acta	2015 Jan	Fu J	doi: 10.1016/j.bbamcr.2014.09.022

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
CESC	chr8	30558948	Nonstop_Mutation	NA	197Lext54	0.19
CESC	chr8	30385192	Intron	novel		0.2
CESC	chr8	30474822	Missense_Mutation	novel	P37H	0.29	RRM_1
CESC	chr8	30385149	Missense_Mutation	novel	Q19H	0.4
CESC	chr8	30566262	3'UTR	novel		0.36
CESC	chr8	30385135	Missense_Mutation	novel	E15K	0.25
CESC	chr8	30385142	Missense_Mutation	novel	N17T	0.27
COAD	chr8	30547444	Intron	novel		0.05
COAD	chr8	30504430	Nonsense_Mutation	NA	E131*	0.22
COAD	chr8	30544545	Missense_Mutation	NA	P150L	0.32
COAD	chr8	30547449	Intron	novel		0.36
COAD	chr8	30547390	Intron	novel		0.05
COAD	chr8	30547458	Intron	novel		0.16
COAD	chr8	30385160	Splice_Site	novel	X22_splice	0.28
COAD	chr8	30504420	Missense_Mutation	NA	F127L	0.32
COAD	chr8	30558890	Missense_Mutation	NA	R178C	0.27
GBM	chr8	30477829	Missense_Mutation	novel	S59A	0.13	RRM_1
HNSC	chr8	30544730	Intron	novel		0.24
HNSC	chr8	30544722	Intron	novel		0.42
HNSC	chr8	30544573	Silent	rs146741990	A159A	0.23
HNSC	chr8	30544589	Missense_Mutation	rs367843710	P165A	0.05
HNSC	chr8	30474784	Silent	NA	R24R	0.67
LAML	chr8	30504322	Nonsense_Mutation	NA	R95*	0.09
LAML	chr8	30474809	Missense_Mutation	novel	L33M	0.03	RRM_1
LGG	chr8	30477822	Silent	novel	K56K	0.33
LIHC	chr8	30504328	Nonsense_Mutation	novel	E97*	0.31
LUAD	chr8	30549542	Intron	novel		0.22
LUAD	chr8	30474811	Silent	novel	L33L	0.14
LUSC	chr8	30549557	Intron	novel		0.23
LUSC	chr8	30549543	Intron	rs143076913		0.27
LUSC	chr8	30504286	Missense_Mutation	novel	G83R	0.34	RRM_1
LUSC	chr8	30504335	Missense_Mutation	novel	A99V	0.53
LUSC	chr8	30547362	Intron	novel		0.16
OV	chr8	30474784	Silent	NA	R24R	0.59
PRAD	chr8	30549546	Intron	rs376566256		0.21
PRAD	chr8	30558895	Nonsense_Mutation	novel	W179*	0.42
READ	chr8	30544607	Missense_Mutation	novel	A171T	0.08
READ	chr8	30504430	Nonsense_Mutation	NA	E131*	0.37
SKCM	chr8	30474828	Missense_Mutation	NA	E39G	0.27	RRM_1
SKCM	chr8	30544578	Missense_Mutation	rs745752899	A161V	0.51
SKCM	chr8	30504297	Silent	rs754590726	F86F	0.44
SKCM	chr8	30504317	Missense_Mutation	novel	T93R	0.62
SKCM	chr8	30544815	Intron	novel		0.54
SKCM	chr8	30549562	Intron	rs147114264		0.27
STAD	chr8	30544587	Missense_Mutation	NA	P164L	0.36
STAD	chr8	30544564	Silent	rs755192176	A156A	0.2
STAD	chr8	30547444	Intron	novel		0.24
STAD	chr8	30549554	Intron	novel		0.42
STAD	chr8	30504347	Missense_Mutation	novel	T103M	0.33
STAD	chr8	30479347	Silent	NA	S72S	0.17
STAD	chr8	30474828	Missense_Mutation	NA	E39G	0.26	RRM_1
STAD	chr8	30504380	Frame_Shift_Ins	novel	*N115Kfs20**	0.16
STAD	chr8	30547444	Intron	novel		0.33
STAD	chr8	30549518	Intron	novel		0.21
THCA	chr8	30504399	Silent	NA	L120L	0.1
THCA	chr8	30504346	Frame_Shift_Ins	novel	*V111Efs31**	0.02
UCEC	chr8	30549578	Intron	NA		0.35
UCEC	chr8	30544718	Intron	novel		0.46
UCEC	chr8	30570671	3'UTR	novel		0.09
UCEC	chr8	30479357	Missense_Mutation	novel	A76T	0.48	RRM_1
UCEC	chr8	30474856	Missense_Mutation	novel	K48N	0.07	RRM_1
UCEC	chr8	30544528	Missense_Mutation	NA	S144R	0.13
UCEC	chr8	30547494	Intron	novel		0.4
UCEC	chr8	30544768	Intron	novel		0.35
UCEC	chr8	30504298	Missense_Mutation	novel	D87N	0.65	RRM_1
UCEC	chr8	30479315	Missense_Mutation	novel	P62S	0.29	RRM_1
UCEC	chr8	30570714	3'UTR	novel		0.27
UCEC	chr8	30479365	Missense_Mutation	novel	K78N	0.25	RRM_1
UCEC	chr8	30558913	Silent	novel	A185A	0.16
UCEC	chr8	30504399	Silent	NA	L120L	0.48
UCEC	chr8	30566307	3'UTR	novel		0.47
UCEC	chr8	30544664	Intron	novel		0.47
UCEC	chr8	30474783	Missense_Mutation	NA	R24Q	0.21
UCEC	chr8	30558951	3'UTR	novel		0.5
UCEC	chr8	30570750	3'UTR	novel		0.74
UCEC	chr8	30547472	Intron	rs376753276		0.23

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
BLCA	DEL	0.5392	4.5185e-08
DLBC	DEL	0.1875	0.15679
ESCA	DEL	0.3804	0.060925
PAAD	DEL	0.2174	0.050455
READ	DEL	0.5394	0.20625

Survival Analysis

Cancer	P-value	Q-value
SARC	0.0019	Kaplan-Meier Survival Analysis
ACC	0.038	Kaplan-Meier Survival Analysis
KIRP	0.0032	Kaplan-Meier Survival Analysis
BLCA	0.0028	Kaplan-Meier Survival Analysis
KICH	0.044	Kaplan-Meier Survival Analysis
UCEC	0.0027	Kaplan-Meier Survival Analysis
LIHC	0.006	Kaplan-Meier Survival Analysis
LGG	0.0001	Kaplan-Meier Survival Analysis
THCA	0.042	Kaplan-Meier Survival Analysis
LUAD	0.001	Kaplan-Meier Survival Analysis
UVM	0.038	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000157110 (Gene tree)
Gene ID: 11030
Gene Symbol: RBPMS
Alias: HERMES
Full Name: RNA binding protein, mRNA processing factor
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 187,797 bases
Position: chr8:30,384,465-30,572,261
Accession: 19097
RBP type: canonical RBP
Summary: This gene encodes a member of the RNA recognition motif family of RNA-binding proteins. The RNA recognition motif is between 80-100 amino acids in length and family members contain one to four copies of the motif. The RNA recognition motif consists of two short stretches of conserved sequence, as well as a few highly conserved hydrophobic residues. The encoded protein has a single, putative RNA recognition motif in its N-terminus. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jun 2013]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000318102	RRM_1	PF00076.22	4.3e-11	1	1
ENSP00000380486	RRM_1	PF00076.22	4.3e-11	1	1
ENSP00000287771	RRM_1	PF00076.22	4.6e-11	1	1
ENSP00000340176	RRM_1	PF00076.22	4.7e-11	1	1
ENSP00000428675	RRM_1	PF00076.22	5.3e-11	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
29423656	RNA-binding protein Rbpms is represented in human retinas by isoforms A and C and its transcriptional regulation involves Sp1-binding site.	Mol Genet Genomics	2018 Aug	Ye L	doi: 10.1007/s00438-018-1423-8
17099224	Potentiation of Smad-mediated transcriptional activation by the RNA-binding protein RBPMS.	Nucleic Acids Res	2006	Sun Y	-
23785151	RNA-binding protein Hermes/RBPMS inversely affects synapse density and axon arbor formation in retinal ganglion cells in vivo.	J Neurosci	2013 Jun 19	Hornberg H	doi: 10.1523/JNEUROSCI.5858-12.2013.
24164458	Characterization of DNA damage-induced cellular senescence by ionizing radiation in endothelial cells.	Int J Radiat Biol	2014 Jan	Kim KS	doi: 10.3109/09553002.2014.859763.
28003515	Conserved binding of GCAC motifs by MEC-8, couch potato, and the RBPMS protein family.	RNA	2017 Mar	Soufari H	doi: 10.1261/rna.059733.116
11330819	Resonance assignments for the N-terminal domain from human RNA-binding protein with multiple splicing (RBP-MS).	J Biomol NMR	2001 Mar	Sahasrabudhe PV	-
19737887	RNA binding protein with multiple splicing: a new marker for retinal ganglion cells.	Invest Ophthalmol Vis Sci	2010 Feb	Kwong JM	doi: 10.1167/iovs.09-4098
22110060	Quantitative analysis of retinal ganglion cell survival with Rbpms immunolabeling in animal models of optic neuropathies.	Invest Ophthalmol Vis Sci	2011 Dec 28	Kwong JM	doi: 10.1167/iovs.11-7869.
25281386	The RNA-binding protein RBPMS1 represses AP-1 signaling and regulates breast cancer cell proliferation and migration.	Biochim Biophys Acta	2015 Jan	Fu J	doi: 10.1016/j.bbamcr.2014.09.022
24318667	The RNA binding protein RBPMS is a selective marker of ganglion cells in the mammalian retina.	J Comp Neurol	2014 Apr 15	Rodriguez AR	doi: 10.1002/cne.23521.
27688842	Expression of TGF-β Signaling Regulator RBPMS (RNA-Binding Protein With Multiple Splicing) Is Regulated by IL-1β and TGF-β Superfamily Members, and Decreased in Aged and Osteoarthritic Cartilage.	Cartilage	2016 Oct	Shanmugaapriya S	doi: 10.1177/1947603515623991
27242509	Isolation and Molecular Profiling of Primary Mouse Retinal Ganglion Cells: Comparison of Phenotypes from Healthy and Glaucomatous Retinas.	Front Aging Neurosci	2016 May 18	Chintalapudi SR	doi: 10.3389/fnagi.2016.00093
27703307	Effect of alpha lipoic acid on retinal ganglion cell survival in an optic nerve crush model.	Mol Vis	2016 Sep 23	Liu R	-
27504635	Protective Effect of ALA in Crushed Optic Nerve Cat Retinal Ganglion Cells Using a New Marker RBPMS.	PLoS One	2016 Aug 9	Wang Y	doi: 10.1371/journal.pone.0160309
27450912	A mouse retinal explant model for use in studying neuroprotection in glaucoma.	Exp Eye Res	2016 Oct	Pattamatta U	doi: 10.1016/j.exer.2016.07.010
27375437	Non-image Forming Light Detection by Melanopsin, Rhodopsin, and Long-Middlewave (L/W) Cone Opsin in the Subterranean Blind Mole Rat, Spalax Ehrenbergi: Immunohistochemical Characterization, Distribution, and Connectivity.	Front Neuroanat	2016 Jun 9	Esquiva G	doi: 10.3389/fnana.2016.00061
26335381	Heterogeneous transgene expression in the retinas of the TH-RFP, TH-Cre, TH-BAC-Cre and DAT-Cre mouse lines.	Neuroscience	2015 Oct 29	Vuong HE	doi: 10.1016/j.neuroscience.2015.08.060
26277582	Programmed cell death-1 is expressed in large retinal ganglion cells and is upregulated after optic nerve crush.	Exp Eye Res	2015 Nov	Wang W	doi: 10.1016/j.exer.2015.08.008
27592836	Exploring the molecular basis of RNA recognition by the dimeric RNA-binding protein via molecular simulation methods.	RNA Biol	2016 Nov	Chang S	-
28550523	Morphological evaluation of retinal ganglion cells expressing the L132C/T159C ChR2 mutant transgene in young adult cynomolgus monkeys.	Sci China Life Sci	2017 Nov	Wang W	doi: 10.1007/s11427-017-9055-x
29196198	Neurosurgical Modeling of Retinal Ischemia-Reperfusion Injury.	J Stroke Cerebrovasc Dis	2018 Apr	Shabanzadeh AP	doi: 10.1016/j.jstrokecerebrovasdis.2017.10.019
17309605	Hermes RNA-binding protein targets RNAs-encoding proteins involved in meiotic maturation, early cleavage, and germline development.	Differentiation	2007 Jul	Song HW	-
25651939	Interaction and colocalization of HERMES/RBPMS with NonO, PSF, and G3BP1 in neuronal cytoplasmic RNP granules in mouse retinal line cells.	Genes Cells	2015 Apr	Furukawa MT	doi: 10.1111/gtc.12224
26347403	Structural basis underlying CAC RNA recognition by the RRM domain of dimeric RNA-binding protein RBPMS.	Q Rev Biophys	2016 Jan	Teplova M	-
27273514	The transcription factor ERG recruits CCR4-NOT to control mRNA decay and mitotic progression.	Nat Struct Mol Biol	2016 Jul	Rambout X	doi: 10.1038/nsmb.3243
14975717	Hermes is a localized factor regulating cleavage of vegetal blastomeres in Xenopus laevis.	Dev Biol	2004 Mar 1	Zearfoss NR	-
17293094	Spatiotemporal localization of germ plasm RNAs during zebrafish oogenesis.	Mech Dev	2007 Apr	Kosaka K	-
25719245	Neuritin 1 promotes retinal ganglion cell survival and axonal regeneration following optic nerve crush.	Cell Death Dis	2015 Feb 26	Sharma TP	doi: 10.1038/cddis.2015.22.
24637809	Actin and myosin-dependent localization of mRNA to dendrites.	PLoS One	2014 Mar 17	Balasanyan V	doi: 10.1371/journal.pone.0092349
24265795	Protein interactions in Xenopus germ plasm RNP particles.	PLoS One	2013 Nov 12	Nijjar S	doi: 10.1371/journal.pone.0080077
27166999	Targeting miR-21-3p inhibits proliferation and invasion of ovarian cancer cells.	Oncotarget	2016 Jun 14	Baez-Vega PM	doi: 10.18632/oncotarget.9216.
27568514	Wide-field diffuse amacrine cells in the monkey retina contain immunoreactive Cocaine- and Amphetamine-Regulated Transcript (CART).	Peptides	2016 Oct	Long Y	doi: 10.1016/j.peptides.2016.08.007
27974617	Hermes Regulates Axon Sorting in the Optic Tract by Post-Trancriptional Regulation of Neuropilin 1.	J Neurosci	2016 Dec 14	Hornberg H	-
27583827	Loss of Melanopsin-Expressing Retinal Ganglion Cells in Severely Staged Glaucoma Patients.	Invest Ophthalmol Vis Sci	2016 Sep 1	Obara EA	doi: 10.1167/iovs.16-19997.
28399269	Loss of Melanopsin-Expressing Retinal Ganglion Cells in Patients With Diabetic Retinopathy.	Invest Ophthalmol Vis Sci	2017 Apr 1	Obara EA	doi: 10.1167/iovs.16-21168.
29111855	Neuroprotective effects of inhibitors of Acid-Sensing ion channels (ASICs) in optic nerve crush model in rodents.	Curr Eye Res	2018 Jan	Stankowska DL	doi: 10.1080/02713683.2017.1383442
29392316	Mesenchymal Stem Cell-Derived Small Extracellular Vesicles Promote Neuroprotection in Rodent Models of Glaucoma.	Invest Ophthalmol Vis Sci	2018 Feb 1	Mead B	doi: 10.1167/iovs.17-22855.
29595330	Neuroprotective Effects of Psalmotoxin-1, an Acid-Sensing Ion Channel (ASIC) Inhibitor, in Ischemia Reperfusion in Mouse Eyes.	Curr Eye Res	2018 Jul	Dibas A	doi: 10.1080/02713683.2018.1454478
30452601	Mesenchymal Stem Cell-Derived Small Extracellular Vesicles Promote Neuroprotection in a Genetic DBA/2J Mouse Model of Glaucoma.	Invest Ophthalmol Vis Sci	2018 Nov 1	Mead B	doi: 10.1167/iovs.18-25310.

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000520971	RBPMS-212	315	-	-	- (aa)	-	-
ENST00000520161	RBPMS-209	842	-	ENSP00000427896	115 (aa)	-	E5RFP4
ENST00000287771	RBPMS-201	2974	-	ENSP00000287771	204 (aa)	-	Q93062
ENST00000320203	RBPMS-202	3110	XM_017012980	ENSP00000318102	196 (aa)	XP_016868469	Q93062
ENST00000517860	RBPMS-205	1076	XM_017012984	ENSP00000428675	224 (aa)	XP_016868473	B4E3T4
ENST00000521370	RBPMS-213	645	-	-	- (aa)	-	-
ENST00000339877	RBPMS-203	1341	XM_017012992	ENSP00000340176	219 (aa)	XP_016868481	Q93062
ENST00000520191	RBPMS-210	1613	-	ENSP00000430638	120 (aa)	-	E5RJ31
ENST00000522694	RBPMS-216	613	-	ENSP00000430893	113 (aa)	-	H0YC46
ENST00000521816	RBPMS-214	98	-	-	- (aa)	-	-
ENST00000523104	RBPMS-218	453	-	-	- (aa)	-	-
ENST00000522708	RBPMS-217	359	-	-	- (aa)	-	-
ENST00000519657	RBPMS-208	1005	-	-	- (aa)	-	-
ENST00000522099	RBPMS-215	494	-	-	- (aa)	-	-
ENST00000519647	RBPMS-207	780	XM_024447055	ENSP00000430342	115 (aa)	XP_024302823	E5RFP4
ENST00000397323	RBPMS-204	2941	XM_017012981	ENSP00000380486	196 (aa)	XP_016868470	Q93062
ENST00000523717	RBPMS-220	886	-	-	- (aa)	-	-
ENST00000520916	RBPMS-211	2669	-	-	- (aa)	-	-
ENST00000519359	RBPMS-206	839	-	ENSP00000430370	119 (aa)	-	H0YBU9
ENST00000523115	RBPMS-219	449	-	ENSP00000429086	49 (aa)	-	E5RJD7

Gene Model

Click here to download ENSG00000157110's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000157110	Heart Rate	4E-6	22174390
ENSG00000157110	Erythrocyte Indices	5E-7	28017375
ENSG00000157110	Erythrocyte Count	1E-10	28017375
ENSG00000157110	Breast	1E-6	27182965

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000157110	rs35091702	8	30421955	C	Mean corpuscular hemoglobin	27863252	[0.02-0.036] unit decrease	0.0282288	EFO_0004527
ENSG00000157110	rs35091702	8	30421955	C	Mean corpuscular volume	27863252	[0.021-0.037] unit decrease	0.02880374	EFO_0004526
ENSG00000157110	rs2979489	8	30423317	A	Mean corpuscular volume	28017375	[0.0012-0.0028] unit decrease	0.002	EFO_0004526
ENSG00000157110	rs2979489	8	30423317	A	Mean corpuscular hemoglobin	28017375	[0.0012-0.0028] unit decrease	0.002	EFO_0004527
ENSG00000157110	rs2979531	8	30525496	G	Height	29782485			EFO_0004339
ENSG00000157110	rs2915594	8	30543850	?	Mean corpuscular volume	29403010	[0.023-0.047] unit increase novel	0.03483	EFO_0004526
ENSG00000157110	rs2979472	8	30434188	C	Lymphocyte percentage of white cells	27863252	[0.02-0.036] unit decrease	0.02803282	EFO_0007993
ENSG00000157110	rs2979489	8	30423317	A	Myeloid white cell count	27863252	[0.021-0.037] unit increase	0.02935529	EFO_0007988
ENSG00000157110	rs11993146	8	30462021	A	Platelet count	27863252	[0.018-0.035] unit decrease	0.02660209	EFO_0004309
ENSG00000157110	rs2979489	8	30423317	A	Neutrophil count	27863252	[0.02-0.036] unit increase	0.02832934	EFO_0004833
ENSG00000157110	rs2979489	8	30423317	A	Plateletcrit	27863252	[0.023-0.04] unit increase	0.03141117	EFO_0007985
ENSG00000157110	rs2979481	8	30405270	?	Heart rate variability traits	22174390			EFO_0004326
ENSG00000157110	rs2979489	8	30423317	A	Granulocyte count	27863252	[0.021-0.037] unit increase	0.02919017	EFO_0007987
ENSG00000157110	rs2979489	8	30423317	A	Sum neutrophil eosinophil counts	27863252	[0.022-0.038] unit increase	0.02961417	EFO_0004833\|EFO_0004842
ENSG00000157110	rs2979489	8	30423317	A	Sum basophil neutrophil counts	27863252	[0.02-0.036] unit increase	0.02811685	EFO_0004833\|EFO_0005090
ENSG00000157110	rs35320172	8	30442232	?	Systolic blood pressure	30595370			EFO_0006335
ENSG00000157110	rs2915607	8	30422400	?	Mean corpuscular hemoglobin	30595370			EFO_0004527
ENSG00000157110	rs2979488	8	30423114	?	White blood cell count	30595370			EFO_0004308
ENSG00000157110	rs2979470	8	30430756	T	Systolic blood pressure	30224653	[0.14-0.26] mmHg increase	0.1991	EFO_0006335
ENSG00000157110	rs6468341	8	30421839	?	Eosinophil counts	30595370			EFO_0004842

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000157110's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000157110	RBPMS	90	82.243	ENSG00000166831	RBPMS2	96	69.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000157110	RBPMS	99	84.536	ENSAPOG00000022304	RBPMS	99	84.536	Acanthochromis_polyacanthus
ENSG00000157110	RBPMS	100	100.000	ENSAMEG00000001522	RBPMS	93	98.039	Ailuropoda_melanoleuca
ENSG00000157110	RBPMS	90	89.720	ENSACIG00000011395	RBPMS	75	77.857	Amphilophus_citrinellus
ENSG00000157110	RBPMS	99	84.536	ENSAOCG00000007731	RBPMS	99	84.536	Amphiprion_ocellaris
ENSG00000157110	RBPMS	99	84.536	ENSAPEG00000023543	RBPMS	99	84.536	Amphiprion_percula
ENSG00000157110	RBPMS	99	84.536	ENSATEG00000018184	RBPMS	99	84.536	Anabas_testudineus
ENSG00000157110	RBPMS	97	97.297	ENSACAG00000003012	RBPMS	99	93.846	Anolis_carolinensis
ENSG00000157110	RBPMS	100	100.000	ENSANAG00000028150	RBPMS	100	100.000	Aotus_nancymaae
ENSG00000157110	RBPMS	99	85.052	ENSACLG00000002926	RBPMS	99	85.052	Astatotilapia_calliptera
ENSG00000157110	RBPMS	100	83.163	ENSAMXG00000033491	rbpms	100	83.163	Astyanax_mexicanus
ENSG00000157110	RBPMS	100	100.000	ENSBTAG00000033727	RBPMS	100	98.630	Bos_taurus
ENSG00000157110	RBPMS	100	100.000	ENSCJAG00000012366	RBPMS	100	100.000	Callithrix_jacchus
ENSG00000157110	RBPMS	100	100.000	ENSCAFG00000006503	RBPMS	100	100.000	Canis_familiaris
ENSG00000157110	RBPMS	100	100.000	ENSCAFG00020001031	RBPMS	100	100.000	Canis_lupus_dingo
ENSG00000157110	RBPMS	100	100.000	ENSCHIG00000027156	RBPMS	100	92.893	Capra_hircus
ENSG00000157110	RBPMS	90	100.000	ENSTSYG00000013982	RBPMS	83	100.000	Carlito_syrichta
ENSG00000157110	RBPMS	100	100.000	ENSCPOG00000038597	RBPMS	100	99.087	Cavia_porcellus
ENSG00000157110	RBPMS	100	100.000	ENSCCAG00000033226	RBPMS	100	100.000	Cebus_capucinus
ENSG00000157110	RBPMS	100	100.000	ENSCATG00000036486	RBPMS	100	100.000	Cercocebus_atys
ENSG00000157110	RBPMS	100	100.000	ENSCLAG00000001518	RBPMS	100	100.000	Chinchilla_lanigera
ENSG00000157110	RBPMS	100	100.000	ENSCSAG00000015838	RBPMS	100	100.000	Chlorocebus_sabaeus
ENSG00000157110	RBPMS	100	100.000	ENSCHOG00000008745	RBPMS	100	99.492	Choloepus_hoffmanni
ENSG00000157110	RBPMS	97	96.364	ENSCPBG00000013437	RBPMS	99	92.268	Chrysemys_picta_bellii
ENSG00000157110	RBPMS	100	100.000	ENSCANG00000034997	RBPMS	100	100.000	Colobus_angolensis_palliatus
ENSG00000157110	RBPMS	100	100.000	ENSCGRG00001002814	Rbpms	100	99.091	Cricetulus_griseus_chok1gshd
ENSG00000157110	RBPMS	100	100.000	ENSCGRG00000006095	Rbpms	100	99.495	Cricetulus_griseus_crigri
ENSG00000157110	RBPMS	99	84.021	ENSCSEG00000002777	rbpms	99	85.714	Cynoglossus_semilaevis
ENSG00000157110	RBPMS	99	84.536	ENSCVAG00000013975	RBPMS	99	84.536	Cyprinodon_variegatus
ENSG00000157110	RBPMS	97	60.000	ENSDARG00000099396	rbpms	100	67.647	Danio_rerio
ENSG00000157110	RBPMS	100	100.000	ENSDNOG00000008126	RBPMS	100	96.804	Dasypus_novemcinctus
ENSG00000157110	RBPMS	100	99.087	ENSETEG00000017582	RBPMS	100	99.087	Echinops_telfairi
ENSG00000157110	RBPMS	100	100.000	ENSEASG00005016962	RBPMS	99	100.000	Equus_asinus_asinus
ENSG00000157110	RBPMS	100	100.000	ENSECAG00000020735	RBPMS	100	99.543	Equus_caballus
ENSG00000157110	RBPMS	100	82.301	ENSELUG00000009787	rbpms	99	81.443	Esox_lucius
ENSG00000157110	RBPMS	100	100.000	ENSFCAG00000025639	-	100	99.543	Felis_catus
ENSG00000157110	RBPMS	85	69.307	ENSFCAG00000022292	-	99	49.000	Felis_catus
ENSG00000157110	RBPMS	100	100.000	ENSFDAG00000012078	RBPMS	100	100.000	Fukomys_damarensis
ENSG00000157110	RBPMS	99	84.536	ENSFHEG00000000618	rbpms	99	84.536	Fundulus_heteroclitus
ENSG00000157110	RBPMS	77	56.954	ENSGMOG00000009646	-	100	56.954	Gadus_morhua
ENSG00000157110	RBPMS	99	84.536	ENSGAFG00000016566	RBPMS	99	84.536	Gambusia_affinis
ENSG00000157110	RBPMS	90	89.720	ENSGACG00000019471	rbpms	100	76.020	Gasterosteus_aculeatus
ENSG00000157110	RBPMS	89	97.170	ENSGAGG00000023634	RBPMS	56	85.821	Gopherus_agassizii
ENSG00000157110	RBPMS	99	85.052	ENSHBUG00000005888	RBPMS	99	85.052	Haplochromis_burtoni
ENSG00000157110	RBPMS	100	100.000	ENSHGLG00000002303	RBPMS	100	100.000	Heterocephalus_glaber_female
ENSG00000157110	RBPMS	100	100.000	ENSHGLG00100008787	RBPMS	100	100.000	Heterocephalus_glaber_male
ENSG00000157110	RBPMS	97	85.864	ENSHCOG00000005774	rbpms	99	85.864	Hippocampus_comes
ENSG00000157110	RBPMS	89	88.679	ENSIPUG00000012459	RBPMS	99	80.105	Ictalurus_punctatus
ENSG00000157110	RBPMS	100	100.000	ENSSTOG00000026546	RBPMS	100	99.543	Ictidomys_tridecemlineatus
ENSG00000157110	RBPMS	100	99.543	ENSJJAG00000014024	Rbpms	100	99.543	Jaculus_jaculus
ENSG00000157110	RBPMS	95	85.841	ENSKMAG00000006377	RBPMS	88	71.186	Kryptolebias_marmoratus
ENSG00000157110	RBPMS	100	84.694	ENSLBEG00000027989	RBPMS	97	87.931	Labrus_bergylta
ENSG00000157110	RBPMS	97	87.273	ENSLOCG00000013199	RBPMS	98	86.592	Lepisosteus_oculatus
ENSG00000157110	RBPMS	100	100.000	ENSLAFG00000000209	RBPMS	100	99.543	Loxodonta_africana
ENSG00000157110	RBPMS	100	100.000	ENSMFAG00000036911	RBPMS	100	100.000	Macaca_fascicularis
ENSG00000157110	RBPMS	100	100.000	ENSMMUG00000000458	RBPMS	100	100.000	Macaca_mulatta
ENSG00000157110	RBPMS	100	100.000	ENSMNEG00000043805	RBPMS	100	100.000	Macaca_nemestrina
ENSG00000157110	RBPMS	100	100.000	ENSMLEG00000015635	RBPMS	100	100.000	Mandrillus_leucophaeus
ENSG00000157110	RBPMS	96	85.088	ENSMAMG00000004604	RBPMS	92	68.333	Mastacembelus_armatus
ENSG00000157110	RBPMS	99	85.052	ENSMZEG00005000698	RBPMS	97	87.429	Maylandia_zebra
ENSG00000157110	RBPMS	97	96.364	ENSMGAG00000005088	RBPMS	90	96.571	Meleagris_gallopavo
ENSG00000157110	RBPMS	100	100.000	ENSMAUG00000018892	Rbpms	100	99.091	Mesocricetus_auratus
ENSG00000157110	RBPMS	100	100.000	ENSMICG00000001295	RBPMS	100	98.469	Microcebus_murinus
ENSG00000157110	RBPMS	100	100.000	ENSMOCG00000014009	Rbpms	100	99.091	Microtus_ochrogaster
ENSG00000157110	RBPMS	99	83.929	ENSMMOG00000012036	RBPMS	73	82.286	Mola_mola
ENSG00000157110	RBPMS	97	97.273	ENSMODG00000019006	RBPMS	92	92.308	Monodelphis_domestica
ENSG00000157110	RBPMS	99	83.505	ENSMALG00000003261	RBPMS	99	83.505	Monopterus_albus
ENSG00000157110	RBPMS	100	100.000	MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	Mus_caroli
ENSG00000157110	RBPMS	100	100.000	ENSMUSG00000031586	Rbpms	100	99.091	Mus_musculus
ENSG00000157110	RBPMS	100	100.000	MGP_PahariEiJ_G0021439	Rbpms	100	98.636	Mus_pahari
ENSG00000157110	RBPMS	100	100.000	MGP_SPRETEiJ_G0032087	Rbpms	100	99.091	Mus_spretus
ENSG00000157110	RBPMS	100	100.000	ENSMPUG00000011314	RBPMS	93	98.039	Mustela_putorius_furo
ENSG00000157110	RBPMS	100	100.000	ENSMLUG00000009391	RBPMS	100	98.980	Myotis_lucifugus
ENSG00000157110	RBPMS	100	100.000	ENSNGAG00000011141	Rbpms	100	100.000	Nannospalax_galili
ENSG00000157110	RBPMS	97	85.455	ENSNBRG00000003313	RBPMS	97	87.429	Neolamprologus_brichardi
ENSG00000157110	RBPMS	100	100.000	ENSNLEG00000036183	-	100	99.543	Nomascus_leucogenys
ENSG00000157110	RBPMS	90	98.131	ENSOPRG00000013151	RBPMS	100	79.452	Ochotona_princeps
ENSG00000157110	RBPMS	100	100.000	ENSODEG00000006700	RBPMS	100	100.000	Octodon_degus
ENSG00000157110	RBPMS	97	85.455	ENSONIG00000007546	RBPMS	100	87.429	Oreochromis_niloticus
ENSG00000157110	RBPMS	100	100.000	ENSOCUG00000008572	RBPMS	100	99.543	Oryctolagus_cuniculus
ENSG00000157110	RBPMS	100	83.673	ENSORLG00000004135	-	100	83.673	Oryzias_latipes
ENSG00000157110	RBPMS	100	84.184	ENSORLG00020016179	RBPMS	100	84.184	Oryzias_latipes_hni
ENSG00000157110	RBPMS	100	84.184	ENSORLG00015013770	RBPMS	100	84.184	Oryzias_latipes_hsok
ENSG00000157110	RBPMS	99	84.021	ENSOMEG00000005044	RBPMS	99	84.021	Oryzias_melastigma
ENSG00000157110	RBPMS	100	100.000	ENSOGAG00000030298	RBPMS	100	95.982	Otolemur_garnettii
ENSG00000157110	RBPMS	90	100.000	ENSOARG00000010366	RBPMS	94	88.722	Ovis_aries
ENSG00000157110	RBPMS	100	100.000	ENSPPAG00000033108	RBPMS	100	100.000	Pan_paniscus
ENSG00000157110	RBPMS	100	100.000	ENSPPRG00000004836	RBPMS	100	99.543	Panthera_pardus
ENSG00000157110	RBPMS	100	100.000	ENSPTIG00000015964	RBPMS	90	100.000	Panthera_tigris_altaica
ENSG00000157110	RBPMS	100	100.000	ENSPTRG00000020135	RBPMS	100	100.000	Pan_troglodytes
ENSG00000157110	RBPMS	100	100.000	ENSPANG00000008143	RBPMS	100	100.000	Papio_anubis
ENSG00000157110	RBPMS	90	89.720	ENSPKIG00000004836	rbpms	99	80.423	Paramormyrops_kingsleyae
ENSG00000157110	RBPMS	99	83.036	ENSPKIG00000000535	-	99	81.443	Paramormyrops_kingsleyae
ENSG00000157110	RBPMS	97	94.545	ENSPSIG00000006136	RBPMS	99	95.402	Pelodiscus_sinensis
ENSG00000157110	RBPMS	97	85.455	ENSPMGG00000018012	RBPMS	91	75.248	Periophthalmus_magnuspinnatus
ENSG00000157110	RBPMS	100	97.980	ENSPEMG00000021130	Rbpms	100	97.980	Peromyscus_maniculatus_bairdii
ENSG00000157110	RBPMS	97	95.455	ENSPCIG00000019298	-	68	95.000	Phascolarctos_cinereus
ENSG00000157110	RBPMS	99	84.536	ENSPFOG00000017158	RBPMS	99	84.536	Poecilia_formosa
ENSG00000157110	RBPMS	99	84.536	ENSPLAG00000010767	RBPMS	99	84.536	Poecilia_latipinna
ENSG00000157110	RBPMS	99	84.536	ENSPMEG00000009788	RBPMS	99	84.536	Poecilia_mexicana
ENSG00000157110	RBPMS	99	84.536	ENSPREG00000016959	RBPMS	99	84.536	Poecilia_reticulata
ENSG00000157110	RBPMS	100	100.000	ENSPPYG00000018487	RBPMS	100	100.000	Pongo_abelii
ENSG00000157110	RBPMS	90	98.131	ENSPCAG00000013493	-	100	98.182	Procavia_capensis
ENSG00000157110	RBPMS	100	98.261	ENSPCOG00000015948	RBPMS	100	87.215	Propithecus_coquereli
ENSG00000157110	RBPMS	100	100.000	ENSPVAG00000001661	RBPMS	99	98.165	Pteropus_vampyrus
ENSG00000157110	RBPMS	99	85.052	ENSPNYG00000001172	RBPMS	97	87.429	Pundamilia_nyererei
ENSG00000157110	RBPMS	100	83.673	ENSPNAG00000029160	RBPMS	100	83.673	Pygocentrus_nattereri
ENSG00000157110	RBPMS	100	100.000	ENSRNOG00000013328	Rbpms	100	99.091	Rattus_norvegicus
ENSG00000157110	RBPMS	100	100.000	ENSRBIG00000038218	RBPMS	100	100.000	Rhinopithecus_bieti
ENSG00000157110	RBPMS	100	100.000	ENSRROG00000042518	RBPMS	100	100.000	Rhinopithecus_roxellana
ENSG00000157110	RBPMS	100	99.543	ENSSBOG00000026670	RBPMS	100	99.543	Saimiri_boliviensis_boliviensis
ENSG00000157110	RBPMS	97	97.273	ENSSHAG00000010114	RBPMS	99	90.722	Sarcophilus_harrisii
ENSG00000157110	RBPMS	97	79.091	ENSSFOG00015017481	-	99	80.423	Scleropages_formosus
ENSG00000157110	RBPMS	97	85.455	ENSSFOG00015000417	rbpms	99	82.474	Scleropages_formosus
ENSG00000157110	RBPMS	100	84.071	ENSSMAG00000010871	rbpms	99	84.536	Scophthalmus_maximus
ENSG00000157110	RBPMS	99	84.536	ENSSDUG00000010894	RBPMS	99	84.536	Seriola_dumerili
ENSG00000157110	RBPMS	99	84.536	ENSSLDG00000012916	RBPMS	99	84.536	Seriola_lalandi_dorsalis
ENSG00000157110	RBPMS	100	95.434	ENSSARG00000000274	RBPMS	100	95.434	Sorex_araneus
ENSG00000157110	RBPMS	97	97.273	ENSSPUG00000017525	RBPMS	74	91.237	Sphenodon_punctatus
ENSG00000157110	RBPMS	91	88.889	ENSSPAG00000004777	rbpms	82	83.704	Stegastes_partitus
ENSG00000157110	RBPMS	100	100.000	ENSSSCG00000015846	RBPMS	100	99.543	Sus_scrofa
ENSG00000157110	RBPMS	97	97.273	ENSTGUG00000001776	RBPMS	100	93.158	Taeniopygia_guttata
ENSG00000157110	RBPMS	100	84.184	ENSTRUG00000000041	RBPMS	100	84.184	Takifugu_rubripes
ENSG00000157110	RBPMS	100	100.000	ENSTTRG00000012451	RBPMS	100	97.717	Tursiops_truncatus
ENSG00000157110	RBPMS	92	98.165	ENSUAMG00000026353	RBPMS	76	95.690	Ursus_americanus
ENSG00000157110	RBPMS	100	100.000	ENSUMAG00000007347	RBPMS	96	99.495	Ursus_maritimus
ENSG00000157110	RBPMS	100	100.000	ENSVPAG00000010991	RBPMS	100	100.000	Vicugna_pacos
ENSG00000157110	RBPMS	100	100.000	ENSVVUG00000019770	RBPMS	100	100.000	Vulpes_vulpes
ENSG00000157110	RBPMS	97	92.727	ENSXETG00000011290	rbpms	100	93.678	Xenopus_tropicalis
ENSG00000157110	RBPMS	97	85.455	ENSXCOG00000002436	RBPMS	98	77.320	Xiphophorus_couchianus
ENSG00000157110	RBPMS	99	84.536	ENSXMAG00000027637	RBPMS	99	84.536	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000932	P-body	-	IEA	Component
GO:0003713	transcription coactivator activity	17099224.	IDA	Function
GO:0003723	RNA binding	22658674.	HDA	Function
GO:0003723	RNA binding	26347403.	IDA	Function
GO:0005515	protein binding	16189514.16713569.17099224.21516116.23088713.25416956.	IPI	Function
GO:0005654	nucleoplasm	-	IDA	Component
GO:0005829	cytosol	-	IDA	Component
GO:0006396	RNA processing	8855282.	TAS	Process
GO:0006979	response to oxidative stress	26347403.	IMP	Process
GO:0008143	poly(A) binding	17099224.	IDA	Function
GO:0010494	cytoplasmic stress granule	26347403.	IDA	Component
GO:0010862	positive regulation of pathway-restricted SMAD protein phosphorylation	17099224.	IDA	Process
GO:0035614	snRNA stem-loop binding	21873635.	IBA	Function
GO:0042803	protein homodimerization activity	26347403.	IPI	Function
GO:0060391	positive regulation of SMAD protein signal transduction	17099224.	IDA	Process
GO:1903508	positive regulation of nucleic acid-templated transcription	-	IEA	Process

EuRBPDB

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

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GWAS

PPI

Paralogs

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Gene Ontology

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Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.