EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
23775717Patterns of missplicing due to somatic U2AF1 mutations in myeloid neoplasms.Blood2013 Aug 8Przychodzen Bdoi: 10.1182/blood-2013-01-480970
25271374Kinetic competition during the transcription cycle results in stochastic RNA processing.Elife2014 Oct 1Coulon Adoi: 10.7554/eLife.03939.
24498085A pan-cancer analysis of transcriptome changes associated with somatic mutations in U2AF1 reveals commonly altered splicing events.PLoS One2014 Jan 31Brooks ANdoi: 10.1371/journal.pone.0087361
28893951The cancer-associated U2AF35 470A>G (Q157R) mutation creates an in-frame alternative 5' splice site that impacts splicing regulation in Q157R patients.RNA2017 DecHerdt Odoi: 10.1261/rna.061432.117

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr2143095467Missense_MutationnovelD107H1zf-CCCH
COADchr2143095495Missense_MutationNAE97D0.23zf-CCCH
STADchr2143095443Missense_MutationNAV115I0.55zf-CCCH
UCECchr2143094359Intronnovel0.33
UCECchr2143095444Silentrs115045087Y114Y0.38
UCECchr2143094392Intronnovel0.27

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
OVDEL0.35410.022578
THYMAMP0.01630.24554

Survival Analysis
CancerP-value Q-value
KIRC0.00045

Kaplan-Meier Survival Analysis

MESO0.043

Kaplan-Meier Survival Analysis

ACC0.0076

Kaplan-Meier Survival Analysis

LUSC0.0096

Kaplan-Meier Survival Analysis

TGCT0.043

Kaplan-Meier Survival Analysis

COAD0.033

Kaplan-Meier Survival Analysis

PAAD0.0049

Kaplan-Meier Survival Analysis

BLCA0.0076

Kaplan-Meier Survival Analysis

READ0.024

Kaplan-Meier Survival Analysis

UCEC0.022

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • PRI
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000160201 (Gene tree)
Gene ID
7307
Gene Symbol
U2AF1
Alias
U2AF35|RNU2AF1|RN|U2AFBP
Full Name
U2 small nuclear RNA auxiliary factor 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
14,632 bases
Position
chr21:43,092,956-43,107,587
Accession
12453
RBP type
canonical RBP
Summary
This gene belongs to the splicing factor SR family of genes. U2 auxiliary factor, comprising a large and a small subunit, is a non-snRNP protein required for the binding of U2 snRNP to the pre-mRNA branch site. This gene encodes the small subunit which plays a critical role in both constitutive and enhancer-dependent RNA splicing by directly mediating interactions between the large subunit and proteins bound to the enhancers. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000291552zf-CCCHPF00642.243.1e-1312
ENSP00000291552zf-CCCHPF00642.243.1e-1322
ENSP00000369629zf-CCCHPF00642.243.2e-1312
ENSP00000369629zf-CCCHPF00642.243.2e-1322
ENSP00000381205zf-CCCHPF00642.243.1e-0611
ENSP00000418705zf-CCCHPF00642.243.1e-0611
ENSP00000381205RRM_1PF00076.223.3e-0611
ENSP00000418705RRM_1PF00076.223.3e-0611
ENSP00000369629RRM_1PF00076.226.2e-0611
ENSP00000291552RRM_1PF00076.226.2e-0611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Click here to download all RNA binding sites

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
31124956Effect of RNA splicing machinery gene mutations on prognosis of patients with MDS: A meta-analysis.Medicine (Baltimore)2019 MayWang Xdoi: 10.1097/MD.0000000000015743.
9166400Targeting of U2AF65 to sites of active splicing in the nucleus.J Cell Biol1997 Jun 2Gama-Carvalho M-
12657633The structure of the zinc finger domain from human splicing factor ZNF265 fold.J Biol Chem2003 Jun 20Plambeck CA-
10617206Functional recognition of the 3' splice site AG by the splicing factor U2AF35.Nature1999 Dec 16Wu S-
18067274Alternative modes of binding by U2AF65 at the polypyrimidine tract.Biochemistry2008 Jan 8Henscheid KL-
17312947Cloning and characterization of a novel splice variant of human U2AF1L3 gene.DNA Seq2006 AugChen F-
24139801Global splicing pattern reversion during somatic cell reprogramming.Cell Rep2013 Oct 31Ohta Sdoi: 10.1016/j.celrep.2013.09.016
27776121Wild-Type U2AF1 Antagonizes the Splicing Program Characteristic of U2AF1-Mutant Tumors and Is Required for Cell Survival.PLoS Genet2016 Oct 24Fei DLdoi: 10.1371/journal.pgen.1006384
28372848Splicing Factor Mutations in Myelodysplasias: Insights from Spliceosome Structures.Trends Genet2017 MayJenkins JLdoi: 10.1016/j.tig.2017.03.001
25311244U2AF1 mutations alter sequence specificity of pre-mRNA binding and splicing.Leukemia2015 AprOkeyo-Owuor Tdoi: 10.1038/leu.2014.303
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000496462U2AF1-2123973--- (aa)--
ENST00000464750U2AF1-206966-ENSP0000042067275 (aa)-Q01081
ENST00000471250U2AF1-2081676--- (aa)--
ENST00000459639U2AF1-2041675-ENSP00000418705167 (aa)-Q01081
ENST00000398137U2AF1-2031019XM_024452129ENSP00000381205167 (aa)XP_024307897Q01081
ENST00000486519U2AF1-211682-ENSP0000048963245 (aa)-A0A1B0GW87
ENST00000380276U2AF1-202940XM_017028468ENSP00000369629240 (aa)XP_016883957Q01081
ENST00000291552U2AF1-201962XM_011529743ENSP00000291552240 (aa)XP_011528045Q01081
ENST00000475639U2AF1-2094694--- (aa)--
ENST00000468039U2AF1-207609--- (aa)--
ENST00000463599U2AF1-205338--- (aa)--
ENST00000478282U2AF1-2103344--- (aa)--
Gene Model
Click here to download ENSG00000160201's gene model file
Pathways
Pathway IDPathway NameSource
hsa03040SpliceosomeKEGG
hsa05131ShigellosisKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000160201Antihypertensive Agents8.5080000E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000160201's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000160201U2AF19897.727ENSG00000161265U2AF1L410090.909
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000160201U2AF198100.000ENSAPOG00000002292-7996.774Acanthochromis_polyacanthus
ENSG00000160201U2AF198100.000ENSAPOG00000008858-10091.667Acanthochromis_polyacanthus
ENSG00000160201U2AF19656.522ENSAPOG00000004712zrsr26838.122Acanthochromis_polyacanthus
ENSG00000160201U2AF1100100.000ENSAMEG00000006793-7894.624Ailuropoda_melanoleuca
ENSG00000160201U2AF198100.000ENSAMEG00000000592-8589.247Ailuropoda_melanoleuca
ENSG00000160201U2AF110097.778ENSACIG00000016862U2AF1L58177.957Amphilophus_citrinellus
ENSG00000160201U2AF198100.000ENSAOCG00000011990-10091.667Amphiprion_ocellaris
ENSG00000160201U2AF198100.000ENSAOCG00000015950-8096.774Amphiprion_ocellaris
ENSG00000160201U2AF198100.000ENSAPEG00000001266-8096.774Amphiprion_percula
ENSG00000160201U2AF198100.000ENSAPEG00000015747-10091.250Amphiprion_percula
ENSG00000160201U2AF198100.000ENSATEG00000010841-10092.116Anabas_testudineus
ENSG00000160201U2AF198100.000ENSATEG00000017931-10091.250Anabas_testudineus
ENSG00000160201U2AF110099.174ENSACAG00000017836U2AF110099.174Anolis_carolinensis
ENSG00000160201U2AF19895.455ENSANAG00000012083-8587.097Aotus_nancymaae
ENSG00000160201U2AF162100.000ENSANAG00000029994-8482.941Aotus_nancymaae
ENSG00000160201U2AF1100100.000ENSANAG00000026034-100100.000Aotus_nancymaae
ENSG00000160201U2AF198100.000ENSANAG00000021324-10093.776Aotus_nancymaae
ENSG00000160201U2AF198100.000ENSACLG00000003526-8295.699Astatotilapia_calliptera
ENSG00000160201U2AF198100.000ENSACLG00000024829-10091.250Astatotilapia_calliptera
ENSG00000160201U2AF198100.000ENSAMXG00000034836u2af17896.774Astyanax_mexicanus
ENSG00000160201U2AF110098.750ENSBTAG00000011645U2AF110098.750Bos_taurus
ENSG00000160201U2AF198100.000ENSBTAG00000023610U2AF1L48589.247Bos_taurus
ENSG00000160201U2AF19383.333WBGene00006698uaf-26566.667Caenorhabditis_elegans
ENSG00000160201U2AF1100100.000ENSCJAG00000015843-100100.000Callithrix_jacchus
ENSG00000160201U2AF198100.000ENSCAFG00000006856-8589.247Canis_familiaris
ENSG00000160201U2AF1100100.000ENSCAFG00000010572U2AF1100100.000Canis_familiaris
ENSG00000160201U2AF1100100.000ENSCAFG00020018861U2AF1L5100100.000Canis_lupus_dingo
ENSG00000160201U2AF17168.750ENSCAFG00020003688-5833.571Canis_lupus_dingo
ENSG00000160201U2AF198100.000ENSCAFG00020018413-8589.247Canis_lupus_dingo
ENSG00000160201U2AF1100100.000ENSCAFG00020020321-100100.000Canis_lupus_dingo
ENSG00000160201U2AF18996.644ENSCAFG00020011412-8196.644Canis_lupus_dingo
ENSG00000160201U2AF198100.000ENSCHIG00000001219-8589.247Capra_hircus
ENSG00000160201U2AF110098.750ENSCHIG00000012917U2AF110098.750Capra_hircus
ENSG00000160201U2AF1100100.000ENSTSYG00000006799-100100.000Carlito_syrichta
ENSG00000160201U2AF110099.401ENSCAPG00000009172-10099.401Cavia_aperea
ENSG00000160201U2AF110099.583ENSCPOG00000004893U2AF110099.583Cavia_porcellus
ENSG00000160201U2AF1100100.000ENSCCAG00000036938-100100.000Cebus_capucinus
ENSG00000160201U2AF1100100.000ENSCATG00000044934-100100.000Cercocebus_atys
ENSG00000160201U2AF19895.455ENSCATG00000038848-8586.559Cercocebus_atys
ENSG00000160201U2AF18489.474ENSCATG00000015796-7480.000Cercocebus_atys
ENSG00000160201U2AF110099.583ENSCLAG00000009589U2AF110099.583Chinchilla_lanigera
ENSG00000160201U2AF19897.727ENSCSAG00000004364U2AF1L45286.000Chlorocebus_sabaeus
ENSG00000160201U2AF1100100.000ENSCSAG00000008019U2AF1100100.000Chlorocebus_sabaeus
ENSG00000160201U2AF110098.817ENSCHOG00000011359-10098.990Choloepus_hoffmanni
ENSG00000160201U2AF198100.000ENSCHOG00000001034U2AF1L46259.509Choloepus_hoffmanni
ENSG00000160201U2AF18069.444ENSCPBG00000012684ZRSR28039.474Chrysemys_picta_bellii
ENSG00000160201U2AF17877.692ENSCPBG00000001404U2AF1L46685.577Chrysemys_picta_bellii
ENSG00000160201U2AF198100.000ENSCPBG00000012960U2AF110096.386Chrysemys_picta_bellii
ENSG00000160201U2AF19897.727ENSCING00000004086-8384.409Ciona_intestinalis
ENSG00000160201U2AF198100.000ENSCSAVG00000000329-8684.409Ciona_savignyi
ENSG00000160201U2AF1100100.000ENSCANG00000008972U2AF1L5100100.000Colobus_angolensis_palliatus
ENSG00000160201U2AF19895.455ENSCANG00000035194-8573.262Colobus_angolensis_palliatus
ENSG00000160201U2AF17778.125ENSCANG00000030826-7876.331Colobus_angolensis_palliatus
ENSG00000160201U2AF110099.583ENSCGRG00001003060-10099.583Cricetulus_griseus_chok1gshd
ENSG00000160201U2AF198100.000ENSCGRG00001014816Gm493968887.349Cricetulus_griseus_chok1gshd
ENSG00000160201U2AF19897.727ENSCGRG00001006251-8491.935Cricetulus_griseus_chok1gshd
ENSG00000160201U2AF110099.401ENSCGRG00000016812U2af110099.556Cricetulus_griseus_crigri
ENSG00000160201U2AF198100.000ENSCSEG00000001122-8297.849Cynoglossus_semilaevis
ENSG00000160201U2AF198100.000ENSCSEG00000003238-8897.312Cynoglossus_semilaevis
ENSG00000160201U2AF198100.000ENSCVAG00000015263-8297.849Cyprinodon_variegatus
ENSG00000160201U2AF198100.000ENSCVAG00000008190-8296.774Cyprinodon_variegatus
ENSG00000160201U2AF198100.000ENSDARG00000015325u2af17497.312Danio_rerio
ENSG00000160201U2AF19886.364ENSDNOG00000045879-8088.172Dasypus_novemcinctus
ENSG00000160201U2AF198100.000ENSDNOG00000035856-8589.247Dasypus_novemcinctus
ENSG00000160201U2AF110098.765ENSDNOG00000041686-10098.765Dasypus_novemcinctus
ENSG00000160201U2AF198100.000ENSDORG00000009078-8887.273Dipodomys_ordii
ENSG00000160201U2AF110098.802ENSDORG00000000211U2af19798.673Dipodomys_ordii
ENSG00000160201U2AF19897.727FBgn0017457U2af387184.043Drosophila_melanogaster
ENSG00000160201U2AF110099.405ENSETEG00000002200-7099.405Echinops_telfairi
ENSG00000160201U2AF198100.000ENSETEG00000004795U2AF1L45569.565Echinops_telfairi
ENSG00000160201U2AF110076.786ENSEBUG00000012689U2AF1L46288.764Eptatretus_burgeri
ENSG00000160201U2AF198100.000ENSEBUG00000002608-7374.194Eptatretus_burgeri
ENSG00000160201U2AF1100100.000ENSEASG00005001773U2AF1100100.000Equus_asinus_asinus
ENSG00000160201U2AF198100.000ENSEASG00005001205-8590.517Equus_asinus_asinus
ENSG00000160201U2AF198100.000ENSECAG00000017941U2AF1L48589.247Equus_caballus
ENSG00000160201U2AF1100100.000ENSECAG00000015558-100100.000Equus_caballus
ENSG00000160201U2AF17168.750ENSECAG00000006454ZRSR26137.500Equus_caballus
ENSG00000160201U2AF198100.000ENSELUG00000011997u2af17797.312Esox_lucius
ENSG00000160201U2AF1100100.000ENSFCAG00000003970-100100.000Felis_catus
ENSG00000160201U2AF198100.000ENSFCAG00000006383-8589.247Felis_catus
ENSG00000160201U2AF110097.605ENSFALG00000001997-6997.605Ficedula_albicollis
ENSG00000160201U2AF110098.204ENSFDAG00000014673-10098.667Fukomys_damarensis
ENSG00000160201U2AF19866.667ENSFDAG00000015215-9852.299Fukomys_damarensis
ENSG00000160201U2AF198100.000ENSFHEG00000017647-8096.774Fundulus_heteroclitus
ENSG00000160201U2AF198100.000ENSFHEG00000019072-8297.849Fundulus_heteroclitus
ENSG00000160201U2AF180100.000ENSGMOG00000010229-9772.043Gadus_morhua
ENSG00000160201U2AF198100.000ENSGMOG00000003255u2af18296.237Gadus_morhua
ENSG00000160201U2AF110098.750ENSGALG00000016198U2AF110098.750Gallus_gallus
ENSG00000160201U2AF18066.667ENSGALG00000016552ZRSR25139.766Gallus_gallus
ENSG00000160201U2AF198100.000ENSGAFG00000018812-8297.849Gambusia_affinis
ENSG00000160201U2AF198100.000ENSGAFG00000021287-7896.774Gambusia_affinis
ENSG00000160201U2AF198100.000ENSGACG00000014605-8297.849Gasterosteus_aculeatus
ENSG00000160201U2AF198100.000ENSGACG00000003454-7897.312Gasterosteus_aculeatus
ENSG00000160201U2AF198100.000ENSGAGG00000019792U2AF110097.166Gopherus_agassizii
ENSG00000160201U2AF16879.646ENSGAGG00000006054-7289.773Gopherus_agassizii
ENSG00000160201U2AF1100100.000ENSGGOG00000039004-100100.000Gorilla_gorilla
ENSG00000160201U2AF19884.091ENSGGOG00000025487-9391.351Gorilla_gorilla
ENSG00000160201U2AF19897.727ENSGGOG00000016828-8585.484Gorilla_gorilla
ENSG00000160201U2AF15794.792ENSHBUG00000019658-6997.727Haplochromis_burtoni
ENSG00000160201U2AF15794.792ENSHBUG00000019680u2af16997.727Haplochromis_burtoni
ENSG00000160201U2AF198100.000ENSHBUG00000002538-10091.250Haplochromis_burtoni
ENSG00000160201U2AF198100.000ENSHGLG00000009841-10097.561Heterocephalus_glaber_female
ENSG00000160201U2AF110092.216ENSHGLG00100002483-10094.222Heterocephalus_glaber_male
ENSG00000160201U2AF198100.000ENSHCOG00000013601-8497.312Hippocampus_comes
ENSG00000160201U2AF198100.000ENSHCOG00000006043-8297.312Hippocampus_comes
ENSG00000160201U2AF198100.000ENSIPUG00000013962u2af18297.849Ictalurus_punctatus
ENSG00000160201U2AF17770.543ENSSTOG00000000884-8468.072Ictidomys_tridecemlineatus
ENSG00000160201U2AF110098.802ENSSTOG00000012766-10099.111Ictidomys_tridecemlineatus
ENSG00000160201U2AF198100.000ENSJJAG00000006677-8887.349Jaculus_jaculus
ENSG00000160201U2AF110099.401ENSJJAG00000000485U2af19797.826Jaculus_jaculus
ENSG00000160201U2AF198100.000ENSKMAG00000000639-8297.849Kryptolebias_marmoratus
ENSG00000160201U2AF198100.000ENSKMAG00000022082-7299.115Kryptolebias_marmoratus
ENSG00000160201U2AF16993.548ENSLBEG00000000652-5997.170Labrus_bergylta
ENSG00000160201U2AF198100.000ENSLBEG00000013535-7997.312Labrus_bergylta
ENSG00000160201U2AF19670.213ENSLBEG00000024283-5797.170Labrus_bergylta
ENSG00000160201U2AF198100.000ENSLBEG00000024932-8297.849Labrus_bergylta
ENSG00000160201U2AF198100.000ENSLACG00000005228u2af110098.958Latimeria_chalumnae
ENSG00000160201U2AF198100.000ENSLOCG00000001191u2af110098.958Lepisosteus_oculatus
ENSG00000160201U2AF198100.000ENSLAFG00000012923-8589.247Loxodonta_africana
ENSG00000160201U2AF1100100.000ENSLAFG00000011460-100100.000Loxodonta_africana
ENSG00000160201U2AF1100100.000ENSMFAG00000032317-100100.000Macaca_fascicularis
ENSG00000160201U2AF19897.727ENSMFAG00000037807-8587.097Macaca_fascicularis
ENSG00000160201U2AF1100100.000ENSMMUG00000022769-100100.000Macaca_mulatta
ENSG00000160201U2AF18492.105ENSMMUG00000004159-8178.889Macaca_mulatta
ENSG00000160201U2AF17171.875ENSMMUG00000042951-8838.889Macaca_mulatta
ENSG00000160201U2AF19897.727ENSMMUG00000048190-8686.559Macaca_mulatta
ENSG00000160201U2AF19895.455ENSMNEG00000037977-8678.836Macaca_nemestrina
ENSG00000160201U2AF1100100.000ENSMNEG00000030283-100100.000Macaca_nemestrina
ENSG00000160201U2AF19897.727ENSMLEG00000004617-8587.097Mandrillus_leucophaeus
ENSG00000160201U2AF1100100.000ENSMLEG00000029446-100100.000Mandrillus_leucophaeus
ENSG00000160201U2AF198100.000ENSMAMG00000022001-10089.222Mastacembelus_armatus
ENSG00000160201U2AF198100.000ENSMAMG00000015574-7897.312Mastacembelus_armatus
ENSG00000160201U2AF198100.000ENSMZEG00005017751-10091.250Maylandia_zebra
ENSG00000160201U2AF198100.000ENSMZEG00005022330-6295.699Maylandia_zebra
ENSG00000160201U2AF110098.204ENSMGAG00000014587-9894.915Meleagris_gallopavo
ENSG00000160201U2AF110099.583ENSMAUG00000020528U2af110099.583Mesocricetus_auratus
ENSG00000160201U2AF198100.000ENSMAUG00000017381Gm493969986.441Mesocricetus_auratus
ENSG00000160201U2AF1100100.000ENSMICG00000013835-100100.000Microcebus_murinus
ENSG00000160201U2AF19888.636ENSMICG00000009981-9776.757Microcebus_murinus
ENSG00000160201U2AF198100.000ENSMOCG00000009737U2af1l48887.349Microtus_ochrogaster
ENSG00000160201U2AF110099.583ENSMOCG00000003736U2af110099.583Microtus_ochrogaster
ENSG00000160201U2AF198100.000ENSMMOG00000019924-6079.570Mola_mola
ENSG00000160201U2AF198100.000ENSMMOG00000010310-10082.500Mola_mola
ENSG00000160201U2AF198100.000ENSMODG00000014003-7888.710Monodelphis_domestica
ENSG00000160201U2AF110095.429ENSMODG00000029158-9591.469Monodelphis_domestica
ENSG00000160201U2AF198100.000ENSMALG00000015821-8297.312Monopterus_albus
ENSG00000160201U2AF110097.778ENSMALG00000007172-10070.417Monopterus_albus
ENSG00000160201U2AF19897.727MGP_CAROLIEiJ_G0029529U2af1l410090.385Mus_caroli
ENSG00000160201U2AF110099.583MGP_CAROLIEiJ_G0021372U2af110099.583Mus_caroli
ENSG00000160201U2AF198100.000ENSMUSG00000078765U2af1l49890.385Mus_musculus
ENSG00000160201U2AF110099.583ENSMUSG00000061613U2af110099.583Mus_musculus
ENSG00000160201U2AF198100.000MGP_PahariEiJ_G0012763U2af1l410090.385Mus_pahari
ENSG00000160201U2AF110099.583MGP_PahariEiJ_G0023691U2af110099.583Mus_pahari
ENSG00000160201U2AF198100.000MGP_SPRETEiJ_G0030625Gm4939610090.385Mus_spretus
ENSG00000160201U2AF198100.000MGP_SPRETEiJ_G0022286-9785.864Mus_spretus
ENSG00000160201U2AF191100.000ENSMPUG00000009706-100100.000Mustela_putorius_furo
ENSG00000160201U2AF19897.727ENSMPUG00000006135-8087.097Mustela_putorius_furo
ENSG00000160201U2AF198100.000ENSMLUG00000014756-10096.667Myotis_lucifugus
ENSG00000160201U2AF198100.000ENSNGAG00000015744Gm493968887.349Nannospalax_galili
ENSG00000160201U2AF18355.276ENSNGAG00000009661-7062.759Nannospalax_galili
ENSG00000160201U2AF110099.583ENSNGAG00000021641U2af110099.583Nannospalax_galili
ENSG00000160201U2AF198100.000ENSNBRG00000006145-7895.699Neolamprologus_brichardi
ENSG00000160201U2AF198100.000ENSNBRG00000003731u2af110091.250Neolamprologus_brichardi
ENSG00000160201U2AF1100100.000ENSNLEG00000030710-100100.000Nomascus_leucogenys
ENSG00000160201U2AF19897.727ENSNLEG00000011333-8587.097Nomascus_leucogenys
ENSG00000160201U2AF198100.000ENSMEUG00000012135-10073.822Notamacropus_eugenii
ENSG00000160201U2AF198100.000ENSMEUG00000015882U2AF1L46463.265Notamacropus_eugenii
ENSG00000160201U2AF19881.818ENSOPRG00000014180-10075.417Ochotona_princeps
ENSG00000160201U2AF110099.583ENSODEG00000014749-10099.583Octodon_degus
ENSG00000160201U2AF198100.000ENSONIG00000014309-7895.699Oreochromis_niloticus
ENSG00000160201U2AF17865.714ENSONIG00000000228zrsr25336.290Oreochromis_niloticus
ENSG00000160201U2AF198100.000ENSONIG00000001903-10091.250Oreochromis_niloticus
ENSG00000160201U2AF110098.802ENSOANG00000006463-10098.673Ornithorhynchus_anatinus
ENSG00000160201U2AF198100.000ENSOCUG00000013434-8488.710Oryctolagus_cuniculus
ENSG00000160201U2AF198100.000ENSORLG00000008857-6590.323Oryzias_latipes
ENSG00000160201U2AF198100.000ENSORLG00000006182-9796.447Oryzias_latipes
ENSG00000160201U2AF198100.000ENSORLG00020022497u2af16790.323Oryzias_latipes_hni
ENSG00000160201U2AF198100.000ENSORLG00020014086-7997.674Oryzias_latipes_hni
ENSG00000160201U2AF198100.000ENSORLG00015012979-10091.667Oryzias_latipes_hsok
ENSG00000160201U2AF198100.000ENSORLG00015021567u2af16790.323Oryzias_latipes_hsok
ENSG00000160201U2AF198100.000ENSOMEG00000019531-8674.731Oryzias_melastigma
ENSG00000160201U2AF198100.000ENSOMEG00000009326-10091.667Oryzias_melastigma
ENSG00000160201U2AF198100.000ENSOGAG00000016504U2AF110093.333Otolemur_garnettii
ENSG00000160201U2AF198100.000ENSOGAG00000029517-10095.000Otolemur_garnettii
ENSG00000160201U2AF188100.000ENSOARG00000011162-10099.515Ovis_aries
ENSG00000160201U2AF198100.000ENSOARG00000005013-8589.247Ovis_aries
ENSG00000160201U2AF1100100.000ENSPPAG00000000845U2AF1L5100100.000Pan_paniscus
ENSG00000160201U2AF19897.727ENSPPAG00000026285-8586.559Pan_paniscus
ENSG00000160201U2AF110088.889ENSPPAG00000043414-7780.108Pan_paniscus
ENSG00000160201U2AF198100.000ENSPPRG00000002986-8589.247Panthera_pardus
ENSG00000160201U2AF1100100.000ENSPPRG00000009721U2AF1100100.000Panthera_pardus
ENSG00000160201U2AF198100.000ENSPTIG00000007065-8589.247Panthera_tigris_altaica
ENSG00000160201U2AF168100.000ENSPTIG00000014259U2AF180100.000Panthera_tigris_altaica
ENSG00000160201U2AF19890.909ENSPTRG00000045377-7781.183Pan_troglodytes
ENSG00000160201U2AF17171.875ENSPTRG00000021693ZRSR25234.132Pan_troglodytes
ENSG00000160201U2AF198100.000ENSPTRG00000046484-8085.128Pan_troglodytes
ENSG00000160201U2AF19897.727ENSPTRG00000010860U2AF1L48586.559Pan_troglodytes
ENSG00000160201U2AF1100100.000ENSPTRG00000013952-100100.000Pan_troglodytes
ENSG00000160201U2AF1100100.000ENSPANG00000018430-100100.000Papio_anubis
ENSG00000160201U2AF19695.349ENSPKIG00000011206-8675.806Paramormyrops_kingsleyae
ENSG00000160201U2AF198100.000ENSPKIG00000009285u2af110093.902Paramormyrops_kingsleyae
ENSG00000160201U2AF16793.333ENSPSIG00000004325U2AF1L48486.335Pelodiscus_sinensis
ENSG00000160201U2AF18498.571ENSPSIG00000007232-9998.571Pelodiscus_sinensis
ENSG00000160201U2AF198100.000ENSPMGG00000001166U2AF1L58197.849Periophthalmus_magnuspinnatus
ENSG00000160201U2AF198100.000ENSPEMG00000010021U2af1l48887.349Peromyscus_maniculatus_bairdii
ENSG00000160201U2AF110099.583ENSPEMG00000021041U2af110099.583Peromyscus_maniculatus_bairdii
ENSG00000160201U2AF19893.182ENSPEMG00000013477-8377.957Peromyscus_maniculatus_bairdii
ENSG00000160201U2AF198100.000ENSPCIG00000028098-10096.774Phascolarctos_cinereus
ENSG00000160201U2AF19897.727ENSPCIG00000015581-8186.559Phascolarctos_cinereus
ENSG00000160201U2AF17868.571ENSPCIG00000000346ZRSR27039.024Phascolarctos_cinereus
ENSG00000160201U2AF198100.000ENSPFOG00000013805-8296.257Poecilia_formosa
ENSG00000160201U2AF17865.714ENSPFOG00000017288zrsr26839.735Poecilia_formosa
ENSG00000160201U2AF198100.000ENSPFOG00000011771-8297.849Poecilia_formosa
ENSG00000160201U2AF198100.000ENSPLAG00000012608-8196.774Poecilia_latipinna
ENSG00000160201U2AF198100.000ENSPLAG00000024015-8297.849Poecilia_latipinna
ENSG00000160201U2AF198100.000ENSPMEG00000007991-8297.849Poecilia_mexicana
ENSG00000160201U2AF198100.000ENSPREG00000022679-7996.774Poecilia_reticulata
ENSG00000160201U2AF198100.000ENSPREG00000012953-8297.849Poecilia_reticulata
ENSG00000160201U2AF15161.111ENSPPYG00000009879U2AF1L45858.000Pongo_abelii
ENSG00000160201U2AF183100.000ENSPPYG00000011463-100100.000Pongo_abelii
ENSG00000160201U2AF110098.333ENSPCAG00000013413U2AF110098.333Procavia_capensis
ENSG00000160201U2AF19886.364ENSPCOG00000007736-8775.269Propithecus_coquereli
ENSG00000160201U2AF110099.585ENSPCOG00000019191-10099.585Propithecus_coquereli
ENSG00000160201U2AF110098.333ENSPCOG00000011430-10098.333Propithecus_coquereli
ENSG00000160201U2AF110097.778ENSPVAG00000012843U2AF1L45265.957Pteropus_vampyrus
ENSG00000160201U2AF1100100.000ENSPVAG00000016992U2AF1L5100100.000Pteropus_vampyrus
ENSG00000160201U2AF198100.000ENSPNYG00000023001-10091.250Pundamilia_nyererei
ENSG00000160201U2AF198100.000ENSPNYG00000019129-7895.699Pundamilia_nyererei
ENSG00000160201U2AF110095.556ENSPNAG00000021267u2af18477.419Pygocentrus_nattereri
ENSG00000160201U2AF198100.000ENSPNAG00000018109-8176.882Pygocentrus_nattereri
ENSG00000160201U2AF198100.000ENSRNOG00000024497U2af1l48589.247Rattus_norvegicus
ENSG00000160201U2AF110099.583ENSRNOG00000045860U2af110099.583Rattus_norvegicus
ENSG00000160201U2AF19693.023ENSRBIG00000027827-8081.183Rhinopithecus_bieti
ENSG00000160201U2AF17171.875ENSRBIG00000033960-6138.158Rhinopithecus_bieti
ENSG00000160201U2AF19879.545ENSRBIG00000038945-7673.118Rhinopithecus_bieti
ENSG00000160201U2AF1100100.000ENSRBIG00000028845-100100.000Rhinopithecus_bieti
ENSG00000160201U2AF19895.455ENSRBIG00000043188-8572.581Rhinopithecus_bieti
ENSG00000160201U2AF19895.455ENSRROG00000034680-8666.839Rhinopithecus_roxellana
ENSG00000160201U2AF1100100.000ENSRROG00000036664-99100.000Rhinopithecus_roxellana
ENSG00000160201U2AF19693.023ENSRROG00000028834-7181.183Rhinopithecus_roxellana
ENSG00000160201U2AF19879.545ENSRROG00000036788-7669.892Rhinopithecus_roxellana
ENSG00000160201U2AF19895.455ENSSBOG00000032012-8581.720Saimiri_boliviensis_boliviensis
ENSG00000160201U2AF1100100.000ENSSBOG00000027084-100100.000Saimiri_boliviensis_boliviensis
ENSG00000160201U2AF198100.000ENSSHAG00000017185U2AF1L510096.774Sarcophilus_harrisii
ENSG00000160201U2AF198100.000ENSSFOG00015012433-10093.333Scleropages_formosus
ENSG00000160201U2AF198100.000ENSSFOG00015022804u2af17997.849Scleropages_formosus
ENSG00000160201U2AF198100.000ENSSMAG00000019026-7578.495Scophthalmus_maximus
ENSG00000160201U2AF198100.000ENSSMAG00000013890-8297.849Scophthalmus_maximus
ENSG00000160201U2AF198100.000ENSSDUG00000005186-10091.667Seriola_dumerili
ENSG00000160201U2AF198100.000ENSSDUG00000005336-8097.312Seriola_dumerili
ENSG00000160201U2AF198100.000ENSSLDG00000004576-10091.667Seriola_lalandi_dorsalis
ENSG00000160201U2AF198100.000ENSSLDG00000019481-8097.312Seriola_lalandi_dorsalis
ENSG00000160201U2AF110097.778ENSSARG00000002027U2AF1L45570.186Sorex_araneus
ENSG00000160201U2AF198100.000ENSSPUG00000017707U2AF1L510097.561Sphenodon_punctatus
ENSG00000160201U2AF198100.000ENSSPAG00000011333-8198.387Stegastes_partitus
ENSG00000160201U2AF198100.000ENSSPAG00000005712-7996.774Stegastes_partitus
ENSG00000160201U2AF110099.583ENSSSCG00000033653U2AF110099.583Sus_scrofa
ENSG00000160201U2AF198100.000ENSSSCG00000035162-8589.247Sus_scrofa
ENSG00000160201U2AF110098.750ENSTGUG00000005826U2AF110098.750Taeniopygia_guttata
ENSG00000160201U2AF198100.000ENSTRUG00000013815-7896.237Takifugu_rubripes
ENSG00000160201U2AF198100.000ENSTRUG00000010538-8179.032Takifugu_rubripes
ENSG00000160201U2AF198100.000ENSTNIG00000013914-8195.699Tetraodon_nigroviridis
ENSG00000160201U2AF198100.000ENSTNIG00000008311-10091.250Tetraodon_nigroviridis
ENSG00000160201U2AF110098.802ENSTBEG00000000453-10099.111Tupaia_belangeri
ENSG00000160201U2AF19895.455ENSTTRG00000009955-9782.258Tursiops_truncatus
ENSG00000160201U2AF19897.727ENSTTRG00000003816U2AF1L48058.683Tursiops_truncatus
ENSG00000160201U2AF17168.750ENSUAMG00000016637ZRSR25538.690Ursus_americanus
ENSG00000160201U2AF1100100.000ENSUAMG00000009481-9399.558Ursus_americanus
ENSG00000160201U2AF198100.000ENSUAMG00000020697-8589.247Ursus_americanus
ENSG00000160201U2AF198100.000ENSUMAG00000020355-8189.247Ursus_maritimus
ENSG00000160201U2AF18393.000ENSUMAG00000025525-7793.000Ursus_maritimus
ENSG00000160201U2AF17168.750ENSUMAG00000008698ZRSR25538.690Ursus_maritimus
ENSG00000160201U2AF110098.204ENSVPAG00000002856-7498.204Vicugna_pacos
ENSG00000160201U2AF1100100.000ENSVVUG00000017149-9996.203Vulpes_vulpes
ENSG00000160201U2AF17168.750ENSVVUG00000014486-6233.571Vulpes_vulpes
ENSG00000160201U2AF198100.000ENSVVUG00000015000-8589.247Vulpes_vulpes
ENSG00000160201U2AF16796.667ENSXETG00000004456u2af17580.814Xenopus_tropicalis
ENSG00000160201U2AF198100.000ENSXCOG00000020559-7880.108Xiphophorus_couchianus
ENSG00000160201U2AF198100.000ENSXCOG00000018906-8579.032Xiphophorus_couchianus
ENSG00000160201U2AF198100.000ENSXMAG00000008127-8297.849Xiphophorus_maculatus
ENSG00000160201U2AF198100.000ENSXMAG00000020882-7796.774Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000398mRNA splicing, via spliceosome9731529.11991638.ICProcess
GO:0000398mRNA splicing, via spliceosome-TASProcess
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005515protein binding11551507.15652350.16189514.17577209.18559666.20696395.21460037.21516116.21988832.22365833.23455924.23602568.25416956.IPIFunction
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005681spliceosomal complex21873635.IBAComponent
GO:0005681spliceosomal complex9731529.IDAComponent
GO:0006397mRNA processing1388271.TASProcess
GO:0006405RNA export from nucleus-TASProcess
GO:0006406mRNA export from nucleus-TASProcess
GO:0008380RNA splicing1388271.TASProcess
GO:0015030Cajal body1388271.TASComponent
GO:0016607nuclear speck-ISSComponent
GO:0030628pre-mRNA 3'-splice site binding21873635.IBAFunction
GO:0031124mRNA 3'-end processing-TASProcess
GO:0046872metal ion binding-IEAFunction
GO:0050733RS domain binding-IEAFunction
GO:0071013catalytic step 2 spliceosome11991638.IDAComponent
GO:0089701U2AF21873635.IBAComponent
GO:0089701U2AF1824937.2531895.IDAComponent
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