EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
22741436	[Association of prostate cancer with PDLIM5, SLC22A3 and NKX3-1 in Chinese men].	Zhonghua Nan Ke Xue	2012 May	Hui J	-
27350677	Bayesian logistic regression in detection of gene-steroid interaction for cancer at PDLIM5 locus.	J Genet	2016 Jun	Wang KS	-

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq
ACC	chr4	94576035	Splice_Site	novel	X237_splice	0.34
BLCA	chr4	94640339	Nonsense_Mutation	novel	S391*	0.18
BLCA	chr4	94640273	Splice_Region	novel		0.31
BLCA	chr4	94455360	Silent	novel	F24F	0.25
BLCA	chr4	94640353	Missense_Mutation	NA	T396P	0.42
BLCA	chr4	94618093	Missense_Mutation	novel	R337T	0.21
BLCA	chr4	94662525	Silent	NA	C563C	0.68
BLCA	chr4	94585718	Silent	rs770979082	Q288Q	0.34
BRCA	chr4	94666442	3'UTR	novel		0.07
BRCA	chr4	94618052	Silent	NA	T323T	0.13
BRCA	chr4	94585704	Nonsense_Mutation	rs772427411	R284*	0.3
BRCA	chr4	94523787	Missense_Mutation	NA	D54H	0.14
CESC	chr4	94455370	Missense_Mutation	novel	L28M	0.35
CESC	chr4	94618144	Missense_Mutation	novel	S354F	0.31
CESC	chr4	94575754	Missense_Mutation	novel	P144S	0.12
CESC	chr4	94657468	Silent	novel	C502C	0.55
CESC	chr4	94575781	Missense_Mutation	novel	A153S	0.13
CESC	chr4	94523778	Missense_Mutation	NA	L51V	0.23
CESC	chr4	94523730	Missense_Mutation	NA	D35H	0.25
CESC	chr4	94523787	Missense_Mutation	NA	D54H	0.2
COAD	chr4	94582722	Intron	NA		0.18
COAD	chr4	94587148	Intron	novel		0.21
COAD	chr4	94523845	Missense_Mutation	novel	C73Y	0.09
COAD	chr4	94618072	Missense_Mutation	novel	L330P	0.36
COAD	chr4	94657483	Silent	rs766549570	A507A	0.4
COAD	chr4	94575859	Missense_Mutation	novel	L179M	0.24
COAD	chr4	94654476	Missense_Mutation	novel	A434T	0.17
COAD	chr4	94585590	Missense_Mutation	rs201891054	R246C	0.16
COAD	chr4	94579536	Intron	novel		0.08
COAD	chr4	94640310	Silent	novel	T381T	0.16
COAD	chr4	94640414	Missense_Mutation	NA	R416Q	0.35
COAD	chr4	94575818	Missense_Mutation	NA	P165L	0.17
COAD	chr4	94587063	Intron	NA		0.2
COAD	chr4	94585610	Silent	NA	H252H	0.42
COAD	chr4	94618086	Missense_Mutation	NA	S335A	0.31
COAD	chr4	94587263	Intron	novel		0.25
COAD	chr4	94587265	Intron	novel		0.25
COAD	chr4	94523827	Missense_Mutation	NA	Q67P	0.46
DLBC	chr4	94654641	Splice_Site	novel	X488_splice	0.23
ESCA	chr4	94575974	Missense_Mutation	rs750811930	S217F	0.22
ESCA	chr4	94657444	Silent	novel	L494L	0.38
GBM	chr4	94586425	Missense_Mutation	rs760060213	D301N	0.27
GBM	chr4	94640414	Missense_Mutation	NA	R416Q	0.36
GBM	chr4	94585705	Missense_Mutation	rs755802595	R284Q	0.17
GBM	chr4	94662472	Nonsense_Mutation	novel	E546*	0.05
GBM	chr4	94455380	Missense_Mutation	novel	S31C	0.28
GBM	chr4	94585646	Frame_Shift_Ins	novel	*I265Hfs2**	0.05
HNSC	chr4	94575967	Missense_Mutation	novel	E215K	0.15
HNSC	chr4	94455383	Missense_Mutation	novel	S32N	0.59
KIRC	chr4	94662481	Missense_Mutation	rs763954536	D549N	0.22
KIRC	chr4	94587083	Intron	novel		0.1
KIRC	chr4	94587084	Intron	novel		0.08
KIRP	chr4	94575776	Missense_Mutation	NA	T151S	0.28
LIHC	chr4	94586439	Silent	novel	K305K	0.17
LIHC	chr4	94618133	Silent	novel	K350K	0.94
LIHC	chr4	94584873	Intron	novel		0.46
LIHC	chr4	94662425	Missense_Mutation	novel	Y530C	0.2
LUAD	chr4	94523868	Missense_Mutation	NA	L81V	0.13
LUAD	chr4	94575865	Missense_Mutation	novel	A181S	0.27
LUAD	chr4	94523841	Missense_Mutation	novel	G72R	0.44
LUAD	chr4	94523729	Missense_Mutation	NA	K34N	0.21
LUAD	chr4	94618023	Missense_Mutation	rs778323849	P314S	0.17
LUAD	chr4	94523769	Missense_Mutation	NA	D48Y	0.39
LUSC	chr4	94586995	Intron	novel		0.14
LUSC	chr4	94618089	Missense_Mutation	novel	G336S	0.49
LUSC	chr4	94455329	Frame_Shift_Del	novel	*G15Ffs7**	0.11
LUSC	chr4	94587059	Intron	novel		0.3
LUSC	chr4	94663987	Nonsense_Mutation	novel	E571*	0.2
LUSC	chr4	94575938	Missense_Mutation	rs771478401	R205Q	0.37
LUSC	chr4	94662486	Missense_Mutation	NA	M550I	0.46
LUSC	chr4	94585623	Missense_Mutation	novel	S257G	0.32
OV	chr4	94657533	Missense_Mutation	NA	P524H	0.69
OV	chr4	94575775	Missense_Mutation	novel	T151S	0.01
PAAD	chr4	94585710	Missense_Mutation	NA	L286F	0.06
PAAD	chr4	94587153	Intron	novel		0.14
PCPG	chr4	94455325	Missense_Mutation	novel	P13S	0.25
PRAD	chr4	94640369	Missense_Mutation	novel	Q401L	0.11
PRAD	chr4	94455322	Missense_Mutation	NA	A12T	0.1
PRAD	chr4	94640332	Missense_Mutation	novel	A389T	0.06
PRAD	chr4	94654566	Missense_Mutation	novel	A464T	0.29
READ	chr4	94618193	Splice_Site	NA	X370_splice	0.26
READ	chr4	94584870	Intron	novel		0.2
READ	chr4	94640414	Missense_Mutation	NA	R416Q	0.1
READ	chr4	94575845	Missense_Mutation	novel	F174S	0.4
READ	chr4	94664124	3'UTR	novel		0.45
SARC	chr4	94587063	Intron	NA		0.52
SARC	chr4	94585689	Nonsense_Mutation	novel	Q279*	0.25
SKCM	chr4	94585710	Missense_Mutation	NA	L286F	0.22
SKCM	chr4	94618019	Silent	novel	P312P	0.4
SKCM	chr4	94575713	Missense_Mutation	rs752588919	R130Q	0.38
SKCM	chr4	94575668	Missense_Mutation	NA	S115F	0.27
SKCM	chr4	94587148	Intron	novel		0.5
SKCM	chr4	94662465	Silent	NA	F543F	0.62
SKCM	chr4	94662466	Missense_Mutation	NA	P544S	0.4
SKCM	chr4	94575889	Missense_Mutation	NA	Q189E	0.06
SKCM	chr4	94573388	Nonsense_Mutation	NA	Q96*	0.29
SKCM	chr4	94664015	Missense_Mutation	rs770229681	S580F	0.1
SKCM	chr4	94654459	Splice_Site	NA	X428_splice	0.39
SKCM	chr4	94575644	Missense_Mutation	novel	V107G	0.16
SKCM	chr4	94575985	Missense_Mutation	NA	A221T	0.17
SKCM	chr4	94654635	Missense_Mutation	NA	L487F	0.64
SKCM	chr4	94618145	Silent	novel	S354S	0.17
SKCM	chr4	94654635	Missense_Mutation	NA	L487F	0.09
SKCM	chr4	94587018	Intron	novel		0.52
SKCM	chr4	94576007	Missense_Mutation	NA	S228F	0.25
SKCM	chr4	94575965	Missense_Mutation	novel	S214F	0.53
SKCM	chr4	94573371	Missense_Mutation	NA	P90L	0.44
STAD	chr4	94575829	Missense_Mutation	rs761636570	V169I	0.27
STAD	chr4	94585655	Silent	NA	D267D	0.09
STAD	chr4	94657455	Missense_Mutation	rs762186735	W498S	0.09
STAD	chr4	94575694	Missense_Mutation	rs757010684	A124T	0.26
STAD	chr4	94587073	Intron	rs181685632		0.14
STAD	chr4	94455332	Missense_Mutation	novel	G15D	0.3
STAD	chr4	94654544	Silent	NA	I456I	0.08
STAD	chr4	94618171	In_Frame_Ins	novel	Q364dup	0.14
STAD	chr4	94575829	Missense_Mutation	rs761636570	V169I	0.29
STAD	chr4	94587095	Intron	novel		0.36
STAD	chr4	94654613	Silent	NA	C479C	0.2
STAD	chr4	94585005	Intron	novel		0.19
STAD	chr4	94618054	Missense_Mutation	rs115018620	R324Q	0.3
STAD	chr4	94657440	Missense_Mutation	rs763438199	A493V	0.27
TGCT	chr4	94575829	Missense_Mutation	novel	V169L	0.26
UCEC	chr4	94575748	Missense_Mutation	novel	S142P	0.05
UCEC	chr4	94575656	Missense_Mutation	novel	S111Y	0.34
UCEC	chr4	94584657	Intron	novel		0.5
UCEC	chr4	94662480	Silent	novel	G548G	0.18
UCEC	chr4	94618164	Missense_Mutation	novel	P361S	0.53
UCEC	chr4	94523735	Silent	rs754256480	G36G	0.07
UCEC	chr4	94455349	Missense_Mutation	rs767631926	G21S	0.54
UCEC	chr4	94666486	3'UTR	novel		0.39
UCEC	chr4	94575641	Missense_Mutation	novel	P106H	0.37
UCEC	chr4	94585001	Intron	novel		0.53
UCEC	chr4	94666445	3'UTR	novel		0.26
UCEC	chr4	94662497	Missense_Mutation	novel	A554D	0.34
UCEC	chr4	94523768	Silent	rs757246202	G47G	0.44
UCEC	chr4	94575819	Silent	rs116148450	P165P	0.45
UCEC	chr4	94587095	Intron	novel		0.37
UCEC	chr4	94657479	Missense_Mutation	novel	V506A	0.06
UCEC	chr4	94664155	3'UTR	NA		0.2
UCEC	chr4	94654528	Missense_Mutation	novel	N451S	0.22
UCEC	chr4	94640414	Missense_Mutation	NA	R416Q	0.06
UCEC	chr4	94523772	Missense_Mutation	NA	V49M	0.48
UCEC	chr4	94584795	Intron	novel		0.36
UCEC	chr4	94584644	Intron	novel		0.42
UCEC	chr4	94654617	Nonsense_Mutation	novel	R481*	0.32
UCEC	chr4	94584812	Intron	novel		0.08
UCEC	chr4	94575641	Missense_Mutation	novel	P106H	0.29
UCEC	chr4	94662530	Missense_Mutation	novel	V565E	0.24
UCEC	chr4	94575764	Missense_Mutation	rs147707993	S147L	0.31
UCEC	chr4	94610263	Intron	novel		0.36
UCEC	chr4	94575933	Silent	novel	V203V	0.41
UCEC	chr4	94585002	Intron	rs370669920		0.57
UCEC	chr4	94587091	Intron	novel		0.34
UCEC	chr4	94584672	Intron	novel		0.46
UCEC	chr4	94585573	Missense_Mutation	novel	R240I	0.38
UCEC	chr4	94666456	3'UTR	novel		0.46
UCEC	chr4	94575909	Silent	rs773177005	S195S	0.35
UCEC	chr4	94662510	Silent	novel	T558T	0.08
UCEC	chr4	94587188	Intron	novel		0.4
UCEC	chr4	94610207	Intron	rs535855105		0.39
UCEC	chr4	94584791	Intron	novel		0.32
UCEC	chr4	94586406	Splice_Site	rs763032076	X295_splice	0.33
UCEC	chr4	94584752	Intron	novel		0.3
UCEC	chr4	94455266	5'UTR	novel		0.48
UCEC	chr4	94654617	Nonsense_Mutation	novel	R481*	0.17
UCEC	chr4	94575716	Missense_Mutation	novel	P131H	0.41
UCEC	chr4	94608123	Intron	novel		0.24
UCEC	chr4	94575628	Nonsense_Mutation	novel	E102*	0.07
UCEC	chr4	94654503	Nonsense_Mutation	NA	E443*	0.27
UCEC	chr4	94575887	Missense_Mutation	NA	D188G	0.44
UCEC	chr4	94584914	Intron	novel		0.24
UCEC	chr4	94587132	Intron	novel		0.22
UCEC	chr4	94585564	Splice_Site	novel	X237_splice	0.32
UCEC	chr4	94662447	Missense_Mutation	rs115802510	I537M	0.08
UCEC	chr4	94657504	Silent	novel	N514N	0.4
UCEC	chr4	94654598	Missense_Mutation	rs756291512	F474L	0.26
UCEC	chr4	94455246	Splice_Site	novel		0.33
UCEC	chr4	94575713	Missense_Mutation	rs752588919	R130Q	0.54
UCEC	chr4	94576026	Missense_Mutation	novel	Q234H	0.49
UCEC	chr4	94657504	Silent	novel	N514N	0.26
UCEC	chr4	94523817	Missense_Mutation	NA	L64I	0.35

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
LIHC	DEL	0.427	7.0927e-07
LUAD	DEL	0.1957	0.050802
MESO	DEL	0.3908	0.075661

Survival Analysis

Cancer	P-value	Q-value
THYM	0.019	Kaplan-Meier Survival Analysis
KIRC	0.0015	Kaplan-Meier Survival Analysis
STAD	0.035	Kaplan-Meier Survival Analysis
SARC	0.042	Kaplan-Meier Survival Analysis
SKCM	0.0018	Kaplan-Meier Survival Analysis
KIRP	0.023	Kaplan-Meier Survival Analysis
PAAD	0.00073	Kaplan-Meier Survival Analysis
LAML	0.011	Kaplan-Meier Survival Analysis
KICH	0.029	Kaplan-Meier Survival Analysis
UCEC	0.027	Kaplan-Meier Survival Analysis
GBM	0.041	Kaplan-Meier Survival Analysis
LGG	0.00011	Kaplan-Meier Survival Analysis
LUAD	0.0079	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000163110 (Gene tree)
Gene ID: 10611
Gene Symbol: PDLIM5
Alias: LIM|Enh
Full Name: PDZ and LIM domain 5
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 216,371 bases
Position: chr4:94,451,857-94,668,227
Accession: 17468
RBP type: non-canonical RBP
Summary: This gene encodes a member of a family of proteins that possess a 100-amino acid PDZ domain at the N terminus and one to three LIM domains at the C-terminus. This family member functions as a scaffold protein that tethers protein kinases to the Z-disk in striated muscles. It is thought to function in cardiomyocyte expansion and in restraining postsynaptic growth of excitatory synapses. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Jan 2012]

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
27289039	RBM20 and RBM24 cooperatively promote the expression of short enh splice variants.	FEBS Lett	2016 Jul	Ito J	doi: 10.1002/1873-3468.12251

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000511767	PDLIM5-216	463	-	-	- (aa)	-	-
ENST00000359265	PDLIM5-203	1189	-	ENSP00000352210	136 (aa)	-	Q96HC4
ENST00000380180	PDLIM5-205	2020	-	ENSP00000369527	234 (aa)	-	Q96HC4
ENST00000508216	PDLIM5-210	1794	XM_024453877	ENSP00000426804	234 (aa)	XP_024309645	Q96HC4
ENST00000318007	PDLIM5-202	1960	-	ENSP00000322021	214 (aa)	-	Q96HC4
ENST00000542407	PDLIM5-221	2979	XM_005262698	ENSP00000442187	487 (aa)	XP_005262755	Q96HC4
ENST00000627587	PDLIM5-223	1853	-	ENSP00000486938	39 (aa)	-	A0A0D9SFW3
ENST00000504489	PDLIM5-208	538	-	ENSP00000423009	38 (aa)	-	D6RAA1
ENST00000380176	PDLIM5-204	3098	-	-	- (aa)	-	-
ENST00000509357	PDLIM5-213	554	-	ENSP00000422833	85 (aa)	-	H0Y929
ENST00000509333	PDLIM5-212	743	-	-	- (aa)	-	-
ENST00000514743	PDLIM5-219	3356	-	ENSP00000424360	625 (aa)	-	Q96HC4
ENST00000508531	PDLIM5-211	480	-	-	- (aa)	-	-
ENST00000506632	PDLIM5-209	907	-	ENSP00000422528	231 (aa)	-	H0Y8Y3
ENST00000512274	PDLIM5-217	372	-	ENSP00000426379	47 (aa)	-	D6RGG6
ENST00000437932	PDLIM5-206	5713	-	ENSP00000398469	271 (aa)	-	A0A0A0MSP3
ENST00000514830	PDLIM5-220	802	-	-	- (aa)	-	-
ENST00000510099	PDLIM5-214	554	-	ENSP00000486834	176 (aa)	-	A0A0D9SFR4
ENST00000615540	PDLIM5-222	6219	XM_005262693	ENSP00000480359	625 (aa)	XP_005262750	Q96HC4
ENST00000317968	PDLIM5-201	6083	XM_006714069	ENSP00000321746	596 (aa)	XP_006714132	Q96HC4
ENST00000511586	PDLIM5-215	547	-	-	- (aa)	-	-
ENST00000503974	PDLIM5-207	2081	-	ENSP00000424297	483 (aa)	-	Q96HC4
ENST00000513341	PDLIM5-218	794	-	ENSP00000429577	196 (aa)	-	H0YBI4

Gene Model

Click here to download ENSG00000163110's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000163110	Cholesterol	1.71584995678021E-6	17903299
ENSG00000163110	Cholesterol	2.03694257139506E-6	17903299
ENSG00000163110	Cholesterol, LDL	3.63075972197746E-7	17903299
ENSG00000163110	Cholesterol, LDL	5.44259226958239E-9	17903299
ENSG00000163110	Parietal Lobe	6.20174811485352E-5	17903297
ENSG00000163110	Parietal Lobe	3.09990700411156E-5	17903297
ENSG00000163110	Parietal Lobe	8.52998395484139E-5	17903297
ENSG00000163110	Citalopram	5.0800000E-005	-
ENSG00000163110	Citalopram	9.2800000E-005	-
ENSG00000163110	Myocardial Infarction	2.1840000E-005	-
ENSG00000163110	Myocardial Infarction	1.8900000E-005	-
ENSG00000163110	Myocardial Infarction	2.1090000E-005	-
ENSG00000163110	Myocardial Infarction	1.8790000E-005	-
ENSG00000163110	Myocardial Infarction	1.7660000E-005	-
ENSG00000163110	Myocardial Infarction	1.2750000E-005	-
ENSG00000163110	Arterial Pressure	6.5936251E-005	-
ENSG00000163110	Prostatic Neoplasms	5E-6	22219177
ENSG00000163110	Amyotrophic lateral sclerosis 1	6E-6	24529757
ENSG00000163110	PCSK9 protein, human	5E-6	25089948
ENSG00000163110	Simvastatin	5E-6	25089948
ENSG00000163110	Pancreatitis	3E-7	27114598
ENSG00000163110	Precursor Cell Lymphoblastic Leukemia-Lymphoma	3E-7	27114598
ENSG00000163110	Electrocardiography	6E-6	23166209
ENSG00000163110	Adipose Tissue	9E-6	22589738
ENSG00000163110	Estradiol	5E-7	23518928
ENSG00000163110	Lewy Body Disease	8E-6	25188341
ENSG00000163110	Prostatic Neoplasms	4E-15	19767753
ENSG00000163110	Prostatic Neoplasms	1E-11	19767753

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000163110	rs11731606	4	94534108	T	Mean platelet volume	27863252	[0.017-0.035] unit decrease	0.0259829	EFO_0004584
ENSG00000163110	rs200495769	4	94573377	T	Asparaginase-induced acute pancreatitis in acute lymphoblastic leukemia (onset time)	27114598		5.7	EFO_1001507\|EFO_0000220
ENSG00000163110	rs17021918	4	94641726	?	Prostate cancer	19767753	[1.08-1.15]	1.11	EFO_0001663
ENSG00000163110	rs12500426	4	94593458	?	Prostate cancer	19767753	[1.05-1.12]	1.08	EFO_0001663
ENSG00000163110	rs2452600	4	94575731	T	Coronary artery disease	29212778	[0.023-0.05] unit decrease	0.0365	EFO_0000378
ENSG00000163110	rs17336353	4	94595365	G	Response to simvastatin treatment (PCSK9 protein level change)	25089948	[NR] unit increase	0.151	GO_1903491\|EFO_0006899
ENSG00000163110	rs2452591	4	94555568	A	Lewy body disease	25188341	[0.15-0.39] unit decrease	0.2693	EFO_0006792\|EFO_0006799
ENSG00000163110	rs71581597	4	94636417	?	Heel bone mineral density	30048462	[0.014-0.024] unit increase	0.0188892	EFO_0009270
ENSG00000163110	rs12511169	4	94652847	T	Pulse pressure	30578418	[0.096-0.174] mmHg increase	0.1351	EFO_0005763
ENSG00000163110	rs17021918	4	94641726	C	Prostate cancer	29892016	[1.07-1.11]	1.09	EFO_0001663

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000163110's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000163110	PDLIM5	99	95.833	ENSMUSG00000028273	Pdlim5	100	94.393	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003779	actin binding	-	ISS	Function
GO:0005080	protein kinase C binding	-	ISS	Function
GO:0005515	protein binding	16549780.25416956.	IPI	Function
GO:0005829	cytosol	-	ISS	Component
GO:0005913	cell-cell adherens junction	25468996.	HDA	Component
GO:0014069	postsynaptic density	-	ISS	Component
GO:0015629	actin cytoskeleton	-	IDA	Component
GO:0016020	membrane	-	ISS	Component
GO:0042805	actinin binding	-	ISS	Function
GO:0043005	neuron projection	-	IEA	Component
GO:0045211	postsynaptic membrane	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0047485	protein N-terminus binding	-	IEA	Function
GO:0051963	regulation of synapse assembly	-	ISS	Process
GO:0061001	regulation of dendritic spine morphogenesis	-	ISS	Process
GO:0061049	cell growth involved in cardiac muscle cell development	-	ISS	Process
GO:0098609	cell-cell adhesion	-	IEA	Process
GO:0098641	cadherin binding involved in cell-cell adhesion	25468996.	HDA	Function

EuRBPDB

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Description

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

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Note: to get the extension of tumor abbreviations.