EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
26923328	RNA-binding motif protein 47 inhibits Nrf2 activity to suppress tumor growth in lung adenocarcinoma.	Oncogene	2016 Sep 22	Sakurai T	doi: 10.1038/onc.2016.35
24898756	Loss of the multifunctional RNA-binding protein RBM47 as a source of selectable metastatic traits in breast cancer.	Elife	2014 Jun 4	Vanharanta S	doi: 10.7554/eLife.02734.
28680090	Pan-cancer EMT-signature identifies RBM47 down-regulation during colorectal cancer progression.	Sci Rep	2017 Jul 5	Rokavec M	doi: 10.1038/s41598-017-04234-2.

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr4	40438432	Missense_Mutation	novel	F154L	0.32
BLCA	chr4	40432783	Missense_Mutation	NA	I470M	0.4
BLCA	chr4	40425924	Missense_Mutation	rs769388482	D588N	0.33
BLCA	chr4	40438324	Missense_Mutation	novel	K190N	0.24
BLCA	chr4	40438368	Nonsense_Mutation	novel	E176*	0.12
BLCA	chr4	40438368	Missense_Mutation	rs745735810	E176K	0.09
BLCA	chr4	40438527	Missense_Mutation	novel	E123K	0.34
BLCA	chr4	40438368	Missense_Mutation	rs745735810	E176K	0.21
BLCA	chr4	40436566	Missense_Mutation	NA	S402F	0.32
BLCA	chr4	40438087	Silent	NA	F269F	0.45
BLCA	chr4	40437882	Missense_Mutation	novel	E338K	0.57
BLCA	chr4	40438288	Silent	NA	E202E	0.54
BLCA	chr4	40437951	Silent	novel	L315L	0.07
BLCA	chr4	40438017	Missense_Mutation	novel	D293Y	0.14
BRCA	chr4	40438824	Nonsense_Mutation	novel	E24*	0.21
BRCA	chr4	40438763	Frame_Shift_Ins	novel	*Y44Lfs64**	1
BRCA	chr4	40438192	Silent	NA	E234E	0.3
BRCA	chr4	40425954	Missense_Mutation	NA	P578T	0.56
BRCA	chr4	40438039	Missense_Mutation	novel	F285L	0.12
BRCA	chr4	40438135	Silent	NA	L253L	0.3
BRCA	chr4	40438345	Silent	NA	V183V	0.6
BRCA	chr4	40438011	Missense_Mutation	NA	V295M	0.42
BRCA	chr4	40432795	Silent	novel	E466E	0.49
CESC	chr4	40432859	Missense_Mutation	novel	A445V	0.36
CESC	chr4	40438528	Silent	rs200361040	H122H	0.43
CESC	chr4	40437822	Missense_Mutation	rs149580961	G358S	0.77
CESC	chr4	40438699	Silent	rs769060213	P65P	0.33
CESC	chr4	40438306	Silent	novel	F196F	0.44
COAD	chr4	40437888	Missense_Mutation	NA	A336T	0.26
COAD	chr4	40438013	Missense_Mutation	NA	A294V	0.22
COAD	chr4	40436572	Frame_Shift_Del	NA	*G400Dfs45**	0.41
COAD	chr4	40436563	Missense_Mutation	NA	A403V	0.37
COAD	chr4	40437813	Missense_Mutation	NA	Y361H	0.78
COAD	chr4	40438481	Missense_Mutation	rs774218691	P138L	0.24
COAD	chr4	40438143	Missense_Mutation	NA	R251C	0.12
COAD	chr4	40438425	Missense_Mutation	NA	G157R	0.19
COAD	chr4	40438654	Silent	rs199723210	R80R	0.29
GBM	chr4	40438485	Missense_Mutation	NA	R137C	0.07
GBM	chr4	40438342	Silent	rs779152879	Y184Y	0.28
GBM	chr4	40438515	Missense_Mutation	NA	A127T	0.68
GBM	chr4	40438186	Silent	rs759907330	D236D	0.41
GBM	chr4	40425845	3'UTR	novel		0.19
GBM	chr4	40425796	3'UTR	novel		0.21
GBM	chr4	40438772	Missense_Mutation	rs371872185	R41H	0.44
GBM	chr4	40438347	Missense_Mutation	NA	V183I	0.05
GBM	chr4	40425819	3'UTR	novel		0.08
GBM	chr4	40438527	Missense_Mutation	novel	E123K	0.14
GBM	chr4	40438143	Missense_Mutation	NA	R251C	0.25
GBM	chr4	40437823	Silent	NA	Y357Y	0.45
GBM	chr4	40438464	Missense_Mutation	NA	V144M	0.24
GBM	chr4	40438614	Missense_Mutation	rs776189003	V94M	0.34	RRM_1
GBM	chr4	40438658	Missense_Mutation	rs781033383	P79L	0.43	RRM_1
HNSC	chr4	40437910	Silent	novel	Q328Q	0.21
HNSC	chr4	40437882	Missense_Mutation	novel	E338K	0.26
HNSC	chr4	40426047	Missense_Mutation	novel	P547S	0.24
HNSC	chr4	40436579	Missense_Mutation	novel	L398F	0.5
HNSC	chr4	40438621	Missense_Mutation	novel	F91L	0.55	RRM_1
HNSC	chr4	40437960	Nonsense_Mutation	novel	E312*	0.11
HNSC	chr4	40438234	Silent	novel	Q220Q	0.36
KICH	chr4	40436590	Frame_Shift_Ins	novel	*R394Kfs16**	0.27
KIRC	chr4	40432833	Nonsense_Mutation	novel	*S454Tfs3**	0.08
KIRC	chr4	40426093	Silent	NA	I531I	0.15
KIRP	chr4	40437987	Missense_Mutation	novel	G303S	0.5
KIRP	chr4	40438515	Missense_Mutation	NA	A127P	0.14
LAML	chr4	40437982	Silent	novel	T304T	0.07
LGG	chr4	40438508	Missense_Mutation	rs373211767	R129H	0.47
LGG	chr4	40432711	Silent	rs768665539	A494A	0.06
LIHC	chr4	40432740	Missense_Mutation	NA	D485H	0.77
LUAD	chr4	40437894	Missense_Mutation	NA	G334C	0.18
LUAD	chr4	40436721	Intron	novel		0.09
LUAD	chr4	40436605	Missense_Mutation	novel	R389K	0.46
LUAD	chr4	40438413	Missense_Mutation	NA	M161L	0.25
LUAD	chr4	40432739	Missense_Mutation	rs751114219	D485G	0.4
LUAD	chr4	40432686	In_Frame_Del	rs748009887	A500_A502del	0.37
LUAD	chr4	40438337	Missense_Mutation	novel	S186T	0.24
LUAD	chr4	40438581	Missense_Mutation	NA	D105H	0.19	RRM_1
LUAD	chr4	40436597	Missense_Mutation	novel	G392W	0.28
LUAD	chr4	40425910	Silent	novel	T592T	0.2
LUSC	chr4	40438132	Missense_Mutation	novel	M254I	0.37
LUSC	chr4	40438743	Missense_Mutation	NA	G51W	0.21
LUSC	chr4	40438148	Missense_Mutation	NA	Y249C	0.37
LUSC	chr4	40432649	Splice_Site	novel	X514_splice	0.45
LUSC	chr4	40438241	Missense_Mutation	novel	R218L	0.34
LUSC	chr4	40438536	Missense_Mutation	novel	H120D	0.08
LUSC	chr4	40432777	Silent	novel	T472T	0.52
LUSC	chr4	40436629	Missense_Mutation	NA	R381P	0.18
LUSC	chr4	40437899	Missense_Mutation	NA	R332M	0.27
MESO	chr4	40438582	Missense_Mutation	novel	M104I	0.79	RRM_1
OV	chr4	40438540	Nonsense_Mutation	NA	Y118*	0.58
OV	chr4	40438190	Missense_Mutation	NA	I235N	0.23
OV	chr4	40438767	Missense_Mutation	NA	G43C	0.57
OV	chr4	40425794	3'UTR	novel		0.25
OV	chr4	40437792	Missense_Mutation	novel	N368H	0.15
PAAD	chr4	40438162	Silent	NA	T244T	0.18
PAAD	chr4	40438363	Silent	NA	G177G	0.05
PAAD	chr4	40438509	Missense_Mutation	NA	R129C	0.16
PCPG	chr4	40438276	Silent	novel	A206A	0.09
READ	chr4	40438518	Missense_Mutation	rs201192048	R126C	0.38
READ	chr4	40438414	Silent	novel	K160K	0.14
SARC	chr4	40438808	Missense_Mutation	rs773284491	A29V	0.23
SKCM	chr4	40438695	Missense_Mutation	novel	P67S	0.13
SKCM	chr4	40436477	Missense_Mutation	novel	P432S	0.35
SKCM	chr4	40438599	Missense_Mutation	novel	E99K	0.29	RRM_1
SKCM	chr4	40438398	Missense_Mutation	NA	E166K	0.26
SKCM	chr4	40437795	Missense_Mutation	NA	P367S	0.4
SKCM	chr4	40425887	3'UTR	rs139448141		0.17
SKCM	chr4	40436605	Missense_Mutation	novel	R389K	0.28
SKCM	chr4	40437846	Missense_Mutation	NA	D350N	0.39
SKCM	chr4	40425903	3'UTR	novel		0.28
SKCM	chr4	40436537	Missense_Mutation	NA	H412Y	0.08
SKCM	chr4	40438159	Silent	NA	V245V	0.29
SKCM	chr4	40438485	Missense_Mutation	NA	R137C	0.37
SKCM	chr4	40438680	Missense_Mutation	NA	E72K	0.25
SKCM	chr4	40438468	Silent	rs755990777	L142L	0.41
SKCM	chr4	40436584	Missense_Mutation	NA	S396F	0.24
SKCM	chr4	40438128	Missense_Mutation	NA	E256K	0.58
SKCM	chr4	40437815	Missense_Mutation	novel	P360L	0.43
SKCM	chr4	40438237	Silent	NA	I219I	0.3
SKCM	chr4	40438367	Missense_Mutation	novel	E176A	0.41
SKCM	chr4	40438156	Silent	NA	K246K	0.53
SKCM	chr4	40438090	Missense_Mutation	NA	Q268H	0.07
SKCM	chr4	40425887	3'UTR	rs139448141		0.19
SKCM	chr4	40438018	Silent	novel	E292E	0.3
SKCM	chr4	40438303	Silent	NA	A197A	0.27
SKCM	chr4	40438137	Missense_Mutation	NA	L253F	0.05
SKCM	chr4	40436490	Silent	rs753415328	P427P	0.26
SKCM	chr4	40438092	Missense_Mutation	NA	Q268K	0.07
SKCM	chr4	40438300	Silent	NA	F198F	0.63
SKCM	chr4	40438129	Silent	NA	I255I	0.19
SKCM	chr4	40436450	Missense_Mutation	NA	P441S	0.49
SKCM	chr4	40436478	Silent	rs760033921	I431I	0.27
SKCM	chr4	40438348	Silent	rs185994095	I182I	0.29
SKCM	chr4	40425903	3'UTR	novel		0.45
SKCM	chr4	40436546	Missense_Mutation	novel	S409C	0.25
SKCM	chr4	40425927	Missense_Mutation	NA	P587S	0.26
SKCM	chr4	40437816	Missense_Mutation	NA	P360S	0.14
SKCM	chr4	40425955	Silent	NA	F577F	0.47
SKCM	chr4	40432653	Nonsense_Mutation	novel	Q514*	0.45
SKCM	chr4	40432782	Missense_Mutation	NA	H471Y	0.16
SKCM	chr4	40438573	Silent	NA	D107D	0.53
SKCM	chr4	40425880	3'UTR	novel		0.29
SKCM	chr4	40436584	Missense_Mutation	NA	S396F	0.29
SKCM	chr4	40438425	Missense_Mutation	NA	G157R	0.29
SKCM	chr4	40437968	Missense_Mutation	NA	S309L	0.28
SKCM	chr4	40426033	Silent	novel	T551T	0.44
SKCM	chr4	40425887	3'UTR	rs139448141		0.5
SKCM	chr4	40438459	Silent	NA	C145C	0.45
SKCM	chr4	40438423	Silent	NA	G157G	0.4
SKCM	chr4	40426092	Missense_Mutation	NA	P532S	0.13
SKCM	chr4	40438468	Silent	rs755990777	L142L	0.35
SKCM	chr4	40436596	Missense_Mutation	novel	G392E	0.38
SKCM	chr4	40436501	Missense_Mutation	novel	E424K	0.3
SKCM	chr4	40436483	Missense_Mutation	novel	E430K	0.59
SKCM	chr4	40438315	Silent	novel	N193N	0.42
SKCM	chr4	40438213	Silent	NA	A227A	0.32
SKCM	chr4	40438094	Missense_Mutation	novel	G267D	0.34
SKCM	chr4	40438527	Missense_Mutation	novel	E123K	0.28
SKCM	chr4	40438588	Silent	novel	L102L	0.37
SKCM	chr4	40438207	Silent	NA	D229D	0.39
STAD	chr4	40438452	Missense_Mutation	NA	V148M	0.43
STAD	chr4	40426013	Missense_Mutation	NA	N558S	0.08
STAD	chr4	40437885	Frame_Shift_Ins	novel	*A337Rfs38**	0.11
STAD	chr4	40436525	Missense_Mutation	NA	G416R	0.14
STAD	chr4	40438528	Missense_Mutation	novel	H122Q	0.22
STAD	chr4	40438743	Missense_Mutation	NA	G51W	0.64
STAD	chr4	40438363	Silent	NA	G177G	0.36
STAD	chr4	40426105	Silent	NA	N527N	0.23
STAD	chr4	40437807	Missense_Mutation	NA	A363T	0.25
STAD	chr4	40438161	Missense_Mutation	NA	V245M	0.36
STAD	chr4	40425997	Silent	novel	A563A	0.27
STAD	chr4	40437921	Missense_Mutation	NA	S325P	0.21
STAD	chr4	40426002	Missense_Mutation	NA	A562T	0.28
STAD	chr4	40436440	Splice_Site	NA	X444_splice	0.14
STAD	chr4	40438592	Missense_Mutation	NA	R101H	0.21	RRM_1
STAD	chr4	40437952	Silent	NA	T314T	0.36
STAD	chr4	40438347	Missense_Mutation	NA	V183I	0.28
STAD	chr4	40436531	Missense_Mutation	NA	G414W	0.56
STAD	chr4	40438519	Frame_Shift_Ins	novel	*R126Afs5**	0.28
STAD	chr4	40438516	Silent	NA	R126R	0.21
UCEC	chr4	40426105	Silent	NA	N527N	0.29
UCEC	chr4	40424338	3'UTR	novel		0.39
UCEC	chr4	40438300	Silent	NA	F198F	0.38
UCEC	chr4	40436524	Frame_Shift_Del	NA	*G416Efs29**	0.19
UCEC	chr4	40425601	3'UTR	novel		0.54
UCEC	chr4	40436619	Silent	novel	G384G	0.53
UCEC	chr4	40425554	3'UTR	novel		0.17
UCEC	chr4	40438429	Silent	NA	I155I	0.53
UCEC	chr4	40424446	3'UTR	novel		0.56
UCEC	chr4	40438688	Missense_Mutation	rs763314452	R69H	0.16
UCEC	chr4	40438593	Missense_Mutation	novel	R101C	0.54	RRM_1
UCEC	chr4	40425245	3'UTR	novel		0.48
UCEC	chr4	40438137	Missense_Mutation	NA	L253F	0.34
UCEC	chr4	40426010	Missense_Mutation	novel	A559V	0.15
UCEC	chr4	40426012	Silent	novel	N558N	0.14
UCEC	chr4	40436513	Nonsense_Mutation	NA	E420*	0.24
UCEC	chr4	40437968	Missense_Mutation	NA	S309L	0.3
UCEC	chr4	40438189	Silent	NA	I235I	0.22
UCEC	chr4	40438291	Silent	novel	Y201Y	0.24
UCEC	chr4	40438888	Silent	novel	T2T	0.17
UCEC	chr4	40424347	3'UTR	novel		0.32
UCEC	chr4	40438725	Missense_Mutation	novel	G57S	0.4
UCEC	chr4	40425817	3'UTR	novel		0.1
UCEC	chr4	40425514	3'UTR	novel		0.13
UCEC	chr4	40424267	3'Flank	novel		0.21
UCEC	chr4	40425545	3'UTR	novel		0.29
UCEC	chr4	40436629	Missense_Mutation	rs752100792	R381Q	0.17
UCEC	chr4	40423689	3'Flank	novel		0.36
UCEC	chr4	40436558	Missense_Mutation	novel	R405C	0.35
UCEC	chr4	40438465	Silent	rs747171557	G143G	0.38
UCEC	chr4	40436488	Missense_Mutation	NA	N428I	0.31
UCEC	chr4	40438635	Silent	NA	L87L	0.29
UCEC	chr4	40432670	Missense_Mutation	novel	S508L	0.4
UCEC	chr4	40438096	Silent	novel	F266F	0.27
UCEC	chr4	40437894	Missense_Mutation	rs765395807	G334S	0.29
UCEC	chr4	40424538	3'UTR	novel		0.5
UCEC	chr4	40423974	3'Flank	novel		0.55
UCEC	chr4	40424259	3'Flank	rs188290404		0.67
UCEC	chr4	40424551	3'UTR	novel		0.33
UCEC	chr4	40425272	3'UTR	novel		0.51
UCEC	chr4	40426030	Silent	rs761056919	I552I	0.48
UCEC	chr4	40423991	3'Flank	novel		0.38
UCEC	chr4	40424467	3'UTR	novel		0.32
UCEC	chr4	40425500	3'UTR	novel		0.32
UCEC	chr4	40438008	Missense_Mutation	NA	H296Y	0.27
UCEC	chr4	40437895	Silent	rs545228233	G333G	0.2
UCEC	chr4	40438621	Silent	rs764626608	F91F	0.35
UCEC	chr4	40425602	3'UTR	novel		0.31
UCEC	chr4	40424346	3'UTR	rs565757525		0.45
UCEC	chr4	40438263	Missense_Mutation	novel	R211C	0.29
UCEC	chr4	40424338	3'UTR	novel		0.4
UCEC	chr4	40423847	3'Flank	novel		0.44
UCEC	chr4	40426034	Missense_Mutation	novel	T551M	0.08
UCEC	chr4	40438654	Silent	rs199723210	R80R	0.44
UCEC	chr4	40438744	Silent	novel	N50N	0.2
UCEC	chr4	40423779	3'Flank	novel		0.41
UCEC	chr4	40425602	3'UTR	novel		0.32
UCEC	chr4	40424034	3'Flank	novel		0.5
UCEC	chr4	40436552	Missense_Mutation	novel	I407V	0.41
UCEC	chr4	40438729	Silent	novel	Y55Y	0.19
UCEC	chr4	40436557	Missense_Mutation	rs768544332	R405H	0.17
UCEC	chr4	40438313	Missense_Mutation	NA	R194H	0.33
UCEC	chr4	40438925	Splice_Site	novel		0.41
UCEC	chr4	40425807	3'UTR	novel		0.31
UCEC	chr4	40436452	Missense_Mutation	NA	K440T	0.37
UCEC	chr4	40425602	3'UTR	novel		0.55
UCEC	chr4	40425994	Silent	rs780821237	A564A	0.36
UCEC	chr4	40438645	Silent	rs758272045	Y83Y	0.87
UCEC	chr4	40426049	Missense_Mutation	novel	A546D	0.07
UCEC	chr4	40423991	3'Flank	novel		0.33
UCEC	chr4	40425807	3'UTR	novel		0.37
UCEC	chr4	40438348	Silent	rs185994095	I182I	0.53
UCEC	chr4	40438560	Missense_Mutation	novel	G112S	0.1	RRM_1
UCEC	chr4	40424338	3'UTR	novel		0.35
UCEC	chr4	40438473	Silent	novel	L141L	0.3
UCEC	chr4	40426030	Silent	rs761056919	I552I	0.19
UCEC	chr4	40438152	Missense_Mutation	NA	L248I	0.25
UCEC	chr4	40438516	Silent	NA	R126R	0.33
UCEC	chr4	40438645	Nonsense_Mutation	novel	Y83*	0.33	RRM_1
UCEC	chr4	40425807	3'UTR	novel		0.48
UCEC	chr4	40438914	5'UTR	novel		0.5

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
READ	DEL	0.3394	0.14076

Survival Analysis

Cancer	P-value	Q-value
THYM	0.0038	Kaplan-Meier Survival Analysis
STAD	0.012	Kaplan-Meier Survival Analysis
SARC	0.0097	Kaplan-Meier Survival Analysis
MESO	0.0034	Kaplan-Meier Survival Analysis
ACC	0.012	Kaplan-Meier Survival Analysis
HNSC	0.0093	Kaplan-Meier Survival Analysis
SKCM	0.0001	Kaplan-Meier Survival Analysis
BRCA	0.044	Kaplan-Meier Survival Analysis
KIRP	0.0026	Kaplan-Meier Survival Analysis
COAD	0.0044	Kaplan-Meier Survival Analysis
PAAD	0.026	Kaplan-Meier Survival Analysis
READ	0.05	Kaplan-Meier Survival Analysis
LAML	0.0085	Kaplan-Meier Survival Analysis
UCEC	0.025	Kaplan-Meier Survival Analysis
GBM	0.046	Kaplan-Meier Survival Analysis
LIHC	0.0052	Kaplan-Meier Survival Analysis
LGG	0.00011	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000163694 (Gene tree)
Gene ID: 54502
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 207,621 bases
Position: chr4:40,423,255-40,630,875
Accession: 30358
RBP type: canonical RBP
Summary: (RNA Binding Motif Protein 47) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and nucleotide binding. An important paralog of this gene is A1CF.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000371214	RRM_1	PF00076.22	1.1e-37	1	3
ENSP00000371214	RRM_1	PF00076.22	1.1e-37	2	3
ENSP00000371214	RRM_1	PF00076.22	1.1e-37	3	3
ENSP00000423243	RRM_1	PF00076.22	1.3e-37	1	3
ENSP00000423243	RRM_1	PF00076.22	1.3e-37	2	3
ENSP00000423243	RRM_1	PF00076.22	1.3e-37	3	3
ENSP00000295971	RRM_1	PF00076.22	1.7e-37	1	3
ENSP00000295971	RRM_1	PF00076.22	1.7e-37	2	3
ENSP00000295971	RRM_1	PF00076.22	1.7e-37	3	3
ENSP00000371212	RRM_1	PF00076.22	1.7e-37	1	3
ENSP00000371212	RRM_1	PF00076.22	1.7e-37	2	3
ENSP00000371212	RRM_1	PF00076.22	1.7e-37	3	3
ENSP00000422564	RRM_1	PF00076.22	1.2e-23	1	2
ENSP00000422564	RRM_1	PF00076.22	1.2e-23	2	2
ENSP00000421589	RRM_1	PF00076.22	1.9e-15	1	1
ENSP00000423527	RRM_1	PF00076.22	7.3e-15	1	1
ENSP00000426542	RRM_1	PF00076.22	7.7e-15	1	1
ENSP00000423398	RRM_1	PF00076.22	2.1e-09	1	1
ENSP00000424019	RRM_1	PF00076.22	9e-06	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
31080349	Curcumin modulates the apolipoprotein B mRNA editing by coordinating the expression of cytidine deamination to uridine editosome components in primary mouse hepatocytes.	Korean J Physiol Pharmacol	2019 May	He P	doi: 10.4196/kjpp.2019.23.3.181
26923328	RNA-binding motif protein 47 inhibits Nrf2 activity to suppress tumor growth in lung adenocarcinoma.	Oncogene	2016 Sep 22	Sakurai T	doi: 10.1038/onc.2016.35
28604754	RNA-binding motif protein 47 inhibits Nrf2 activity to suppress tumor growth in lung adenocarcinoma.	Oncogene	2017 Aug 31	Sakurai T	doi: 10.1038/onc.2017.191
28680090	Pan-cancer EMT-signature identifies RBM47 down-regulation during colorectal cancer progression.	Sci Rep	2017 Jul 5	Rokavec M	doi: 10.1038/s41598-017-04234-2.
29844590	Post-transcriptional regulator Rbm47 elevates IL-10 production and promotes the immunosuppression of B cells.	Cell Mol Immunol	2019 Jun	Wei Y	doi: 10.1038/s41423-018-0041-z
30403177	miR-25 Promotes Melanoma Progression by regulating RNA binding motif protein 47.	Med Sci (Paris)	2018 Oct	Jiang QQ	doi: 10.1051/medsci/201834f111
24916387	C to U RNA editing mediated by APOBEC1 requires RNA-binding protein RBM47.	EMBO Rep	2014 Aug	Fossat N	doi: 10.15252/embr.201438450
24038582	rbm47, a novel RNA binding protein, regulates zebrafish head development.	Dev Dyn	2013 Dec	Guan R	doi: 10.1002/dvdy.24039
23649762	RNA-binding protein Rbm47 binds to Nanog in mouse embryonic stem cells.	Mol Biol Rep	2013 Jul	Yeganeh M	doi: 10.1007/s11033-013-2528-0
24898756	Loss of the multifunctional RNA-binding protein RBM47 as a source of selectable metastatic traits in breast cancer.	Elife	2014 Jun 4	Vanharanta S	doi: 10.7554/eLife.02734.
26789794	Conditional restoration and inactivation of Rbm47 reveal its tissue-context requirement for viability and growth.	Genesis	2016 Mar	Fossat N	doi: 10.1002/dvg.22920
30309881	Apobec1 complementation factor (A1CF) and RBM47 interact in tissue-specific regulation of C to U RNA editing in mouse intestine and liver.	RNA	2019 Jan	Blanc V	doi: 10.1261/rna.068395.118
25585043	Re-editing the paradigm of Cytidine (C) to Uridine (U) RNA editing.	RNA Biol	2014	Fossat N	doi: 10.1080/15476286.2014.996054.
30620390	Distinct genome-wide methylation patterns in sporadic and hereditary nonfunctioning pancreatic neuroendocrine tumors.	Cancer	2019 Apr 15	Tirosh A	doi: 10.1002/cncr.31930

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000513044	RBM47-210	2118	-	-	- (aa)	-	-
ENST00000511902	RBM47-209	657	-	ENSP00000425111	59 (aa)	-	D6RCT1
ENST00000514014	RBM47-212	2419	-	ENSP00000423243	555 (aa)	-	B7Z8Z7
ENST00000507180	RBM47-206	582	-	ENSP00000423398	123 (aa)	-	D6RA49
ENST00000510871	RBM47-207	4951	-	ENSP00000422945	393 (aa)	-	D6R9D6
ENST00000515053	RBM47-214	1100	-	ENSP00000422564	217 (aa)	-	D6RBS9
ENST00000381795	RBM47-203	4473	XM_017008310	ENSP00000371214	524 (aa)	XP_016863799	A0AV96
ENST00000511598	RBM47-208	836	-	ENSP00000424019	113 (aa)	-	D6RBP6
ENST00000381793	RBM47-202	4816	XM_005248107	ENSP00000371212	593 (aa)	XP_005248164	A0AV96
ENST00000505220	RBM47-204	741	-	ENSP00000425507	59 (aa)	-	D6RCT1
ENST00000513473	RBM47-211	882	-	ENSP00000421589	193 (aa)	-	D6REZ6
ENST00000295971	RBM47-201	4056	XM_005248103	ENSP00000295971	593 (aa)	XP_005248160	A0AV96
ENST00000505414	RBM47-205	856	-	ENSP00000423527	158 (aa)	-	D6R9M7
ENST00000514782	RBM47-213	797	-	ENSP00000426542	137 (aa)	-	D6RFL5
ENST00000515809	RBM47-215	229	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000163694's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000163694	Waist Circumference	4.3840000E-005	-
ENSG00000163694	Arteries	5.1300000E-006	-
ENSG00000163694	Diabetes Mellitus	1.0920000E-005	-
ENSG00000163694	Erythrocyte Indices	3.4360000E-005	-
ENSG00000163694	Platelet Function Tests	5.5900000E-009	-
ENSG00000163694	alpha-Tocopherol	1.3060000E-005	-
ENSG00000163694	Longevity	6E-6	27015805

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000163694	rs73231764	4	40468019	?	Parental longevity (mother's age at death)	27015805	[0.018-0.046] unit decrease	0.03228	EFO_0007796
ENSG00000163694	rs6841258	4	40563409	T	Mosquito bite size	28199695	[0.025-0.054] unit increase	0.0390349	EFO_0008378
ENSG00000163694	rs35529250	4	40426074	T	Diastolic blood pressure	27618447	[0.57-1.23] mmHg decrease	0.9009	EFO_0006336
ENSG00000163694	rs35529250	4	40426074	T	Systolic blood pressure	27618447	mmHg decrease	1.5511	EFO_0006335
ENSG00000163694	rs35529250	4	40426074	T	Hypertension	27618447	z score decrease	4.938	EFO_0000537

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000163694's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000163694	RBM47	51	34.286	ENSG00000244395	RBMY1D	75	34.426
ENSG00000163694	RBM47	73	61.446	ENSG00000256453	DND1	65	39.316
ENSG00000163694	RBM47	51	34.286	ENSG00000242875	RBMY1B	75	34.426
ENSG00000163694	RBM47	91	58.706	ENSG00000135316	SYNCRIP	95	46.292
ENSG00000163694	RBM47	51	34.286	ENSG00000234414	RBMY1A1	75	34.426
ENSG00000163694	RBM47	88	79.581	ENSG00000151962	RBM46	88	77.778
ENSG00000163694	RBM47	51	34.286	ENSG00000242389	RBMY1E	75	34.426
ENSG00000163694	RBM47	91	60.199	ENSG00000125944	HNRNPR	99	34.286
ENSG00000163694	RBM47	66	31.788	ENSG00000140488	CELF6	53	42.857
ENSG00000163694	RBM47	70	34.247	ENSG00000101489	CELF4	53	35.294
ENSG00000163694	RBM47	92	73.000	ENSG00000148584	A1CF	98	73.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000163694	RBM47	100	84.793	ENSAPOG00000011062	rbm47	100	81.383	Acanthochromis_polyacanthus
ENSG00000163694	RBM47	100	98.157	ENSAMEG00000009672	RBM47	100	96.309	Ailuropoda_melanoleuca
ENSG00000163694	RBM47	100	85.253	ENSACIG00000011531	rbm47	100	81.915	Amphilophus_citrinellus
ENSG00000163694	RBM47	100	84.793	ENSAOCG00000022245	rbm47	100	81.383	Amphiprion_ocellaris
ENSG00000163694	RBM47	100	84.793	ENSAPEG00000018304	rbm47	100	81.383	Amphiprion_percula
ENSG00000163694	RBM47	100	82.564	ENSATEG00000018400	rbm47	94	85.028	Anabas_testudineus
ENSG00000163694	RBM47	100	93.088	ENSAPLG00000013974	RBM47	100	87.584	Anas_platyrhynchos
ENSG00000163694	RBM47	100	88.571	ENSACAG00000011833	RBM47	100	85.667	Anolis_carolinensis
ENSG00000163694	RBM47	100	99.078	ENSANAG00000029440	RBM47	100	98.664	Aotus_nancymaae
ENSG00000163694	RBM47	100	82.687	ENSACLG00000016902	rbm47	95	85.311	Astatotilapia_calliptera
ENSG00000163694	RBM47	100	81.223	ENSAMXG00000021794	rbm47	95	84.078	Astyanax_mexicanus
ENSG00000163694	RBM47	100	98.618	ENSBTAG00000002356	RBM47	100	97.143	Bos_taurus
ENSG00000163694	RBM47	100	98.741	ENSCJAG00000019385	RBM47	100	98.476	Callithrix_jacchus
ENSG00000163694	RBM47	99	93.321	ENSCAFG00000015898	RBM47	100	93.289	Canis_familiaris
ENSG00000163694	RBM47	90	96.923	ENSCAFG00020010558	RBM47	94	94.695	Canis_lupus_dingo
ENSG00000163694	RBM47	100	99.115	ENSCHIG00000026214	RBM47	100	97.143	Capra_hircus
ENSG00000163694	RBM47	92	80.354	ENSTSYG00000033612	RBM47	93	89.823	Carlito_syrichta
ENSG00000163694	RBM47	96	92.164	ENSCAPG00000008426	RBM47	100	87.563	Cavia_aperea
ENSG00000163694	RBM47	100	97.696	ENSCPOG00000014100	RBM47	100	94.118	Cavia_porcellus
ENSG00000163694	RBM47	98	84.483	ENSCCAG00000024397	-	99	66.611	Cebus_capucinus
ENSG00000163694	RBM47	100	98.618	ENSCCAG00000030129	-	100	98.476	Cebus_capucinus
ENSG00000163694	RBM47	100	100.000	ENSCATG00000042064	RBM47	100	99.831	Cercocebus_atys
ENSG00000163694	RBM47	100	96.774	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSG00000163694	RBM47	100	100.000	ENSCSAG00000017060	RBM47	100	99.831	Chlorocebus_sabaeus
ENSG00000163694	RBM47	100	98.165	ENSCHOG00000011731	RBM47	88	92.405	Choloepus_hoffmanni
ENSG00000163694	RBM47	100	93.088	ENSCPBG00000013831	RBM47	100	89.500	Chrysemys_picta_bellii
ENSG00000163694	RBM47	100	100.000	ENSCANG00000019997	RBM47	100	99.663	Colobus_angolensis_palliatus
ENSG00000163694	RBM47	100	95.392	ENSCGRG00001000623	-	100	92.785	Cricetulus_griseus_chok1gshd
ENSG00000163694	RBM47	100	88.479	ENSCGRG00001020102	-	100	87.311	Cricetulus_griseus_chok1gshd
ENSG00000163694	RBM47	100	87.558	ENSCGRG00000014760	-	100	86.932	Cricetulus_griseus_crigri
ENSG00000163694	RBM47	100	94.937	ENSCGRG00000007762	-	100	94.937	Cricetulus_griseus_crigri
ENSG00000163694	RBM47	100	83.871	ENSCSEG00000004545	rbm47	100	73.000	Cynoglossus_semilaevis
ENSG00000163694	RBM47	100	86.175	ENSCVAG00000020144	rbm47	100	81.117	Cyprinodon_variegatus
ENSG00000163694	RBM47	100	81.223	ENSDARG00000061985	rbm47	95	77.855	Danio_rerio
ENSG00000163694	RBM47	100	98.618	ENSDNOG00000046854	RBM47	100	93.782	Dasypus_novemcinctus
ENSG00000163694	RBM47	100	96.774	ENSDORG00000010144	Rbm47	100	93.813	Dipodomys_ordii
ENSG00000163694	RBM47	100	96.774	ENSETEG00000009194	RBM47	100	93.478	Echinops_telfairi
ENSG00000163694	RBM47	100	71.429	ENSEBUG00000011912	rbm47	95	75.145	Eptatretus_burgeri
ENSG00000163694	RBM47	100	98.618	ENSEASG00005008443	RBM47	100	96.975	Equus_asinus_asinus
ENSG00000163694	RBM47	100	98.618	ENSECAG00000004400	RBM47	100	96.975	Equus_caballus
ENSG00000163694	RBM47	100	96.789	ENSEEUG00000001194	RBM47	75	96.537	Erinaceus_europaeus
ENSG00000163694	RBM47	99	84.259	ENSELUG00000006148	rbm47	93	85.237	Esox_lucius
ENSG00000163694	RBM47	100	99.115	ENSFCAG00000012399	RBM47	100	96.633	Felis_catus
ENSG00000163694	RBM47	100	92.627	ENSFALG00000002861	RBM47	100	90.620	Ficedula_albicollis
ENSG00000163694	RBM47	100	94.400	ENSFDAG00000016326	RBM47	100	92.773	Fukomys_damarensis
ENSG00000163694	RBM47	100	85.253	ENSFHEG00000007938	rbm47	100	74.080	Fundulus_heteroclitus
ENSG00000163694	RBM47	100	81.780	ENSGMOG00000014802	rbm47	94	84.358	Gadus_morhua
ENSG00000163694	RBM47	100	92.627	ENSGALG00000014267	RBM47	100	92.042	Gallus_gallus
ENSG00000163694	RBM47	100	85.253	ENSGAFG00000020571	rbm47	99	79.630	Gambusia_affinis
ENSG00000163694	RBM47	100	80.000	ENSGACG00000016223	rbm47	94	83.427	Gasterosteus_aculeatus
ENSG00000163694	RBM47	100	93.088	ENSGAGG00000020051	RBM47	100	89.667	Gopherus_agassizii
ENSG00000163694	RBM47	100	100.000	ENSGGOG00000001367	RBM47	100	100.000	Gorilla_gorilla
ENSG00000163694	RBM47	100	82.687	ENSHBUG00000003520	rbm47	95	85.311	Haplochromis_burtoni
ENSG00000163694	RBM47	100	96.891	ENSHGLG00000016914	RBM47	100	96.203	Heterocephalus_glaber_female
ENSG00000163694	RBM47	100	91.150	ENSHGLG00100003071	-	100	83.670	Heterocephalus_glaber_male
ENSG00000163694	RBM47	100	96.203	ENSHGLG00100014028	-	100	96.203	Heterocephalus_glaber_male
ENSG00000163694	RBM47	100	84.932	ENSHCOG00000002074	rbm47	99	81.746	Hippocampus_comes
ENSG00000163694	RBM47	100	84.332	ENSIPUG00000004743	rbm47	97	84.659	Ictalurus_punctatus
ENSG00000163694	RBM47	100	97.666	ENSSTOG00000004727	RBM47	100	97.148	Ictidomys_tridecemlineatus
ENSG00000163694	RBM47	100	95.434	ENSJJAG00000013823	Rbm47	100	94.631	Jaculus_jaculus
ENSG00000163694	RBM47	100	85.388	ENSKMAG00000000084	rbm47	100	81.316	Kryptolebias_marmoratus
ENSG00000163694	RBM47	100	84.018	ENSLBEG00000008436	rbm47	100	80.585	Labrus_bergylta
ENSG00000163694	RBM47	100	90.783	ENSLACG00000007196	RBM47	100	84.422	Latimeria_chalumnae
ENSG00000163694	RBM47	100	90.323	ENSLOCG00000012966	rbm47	95	80.402	Lepisosteus_oculatus
ENSG00000163694	RBM47	100	97.235	ENSLAFG00000011998	RBM47	100	94.454	Loxodonta_africana
ENSG00000163694	RBM47	100	100.000	ENSMFAG00000037967	RBM47	100	99.831	Macaca_fascicularis
ENSG00000163694	RBM47	100	100.000	ENSMMUG00000012036	RBM47	100	100.000	Macaca_mulatta
ENSG00000163694	RBM47	100	100.000	ENSMNEG00000040774	RBM47	100	99.663	Macaca_nemestrina
ENSG00000163694	RBM47	100	100.000	ENSMLEG00000041432	RBM47	100	100.000	Mandrillus_leucophaeus
ENSG00000163694	RBM47	100	83.043	ENSMAMG00000019143	rbm47	95	85.028	Mastacembelus_armatus
ENSG00000163694	RBM47	100	82.687	ENSMZEG00005023659	rbm47	95	85.311	Maylandia_zebra
ENSG00000163694	RBM47	100	93.088	ENSMGAG00000012226	RBM47	100	90.333	Meleagris_gallopavo
ENSG00000163694	RBM47	100	95.392	ENSMAUG00000006493	Rbm47	100	94.937	Mesocricetus_auratus
ENSG00000163694	RBM47	100	91.171	ENSMICG00000026417	RBM47	100	91.062	Microcebus_murinus
ENSG00000163694	RBM47	100	95.853	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSG00000163694	RBM47	100	81.395	ENSMMOG00000007260	rbm47	95	83.989	Mola_mola
ENSG00000163694	RBM47	100	87.558	ENSMODG00000020561	-	100	80.438	Monodelphis_domestica
ENSG00000163694	RBM47	91	84.158	ENSMODG00000015426	-	97	80.064	Monodelphis_domestica
ENSG00000163694	RBM47	100	93.088	ENSMODG00000007003	RBM47	100	91.077	Monodelphis_domestica
ENSG00000163694	RBM47	100	84.793	ENSMALG00000005167	rbm47	100	81.383	Monopterus_albus
ENSG00000163694	RBM47	100	94.470	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.671	Mus_caroli
ENSG00000163694	RBM47	100	94.614	ENSMUSG00000070780	Rbm47	100	93.671	Mus_musculus
ENSG00000163694	RBM47	100	94.931	MGP_PahariEiJ_G0017040	Rbm47	100	94.304	Mus_pahari
ENSG00000163694	RBM47	100	94.470	MGP_SPRETEiJ_G0028253	Rbm47	100	93.671	Mus_spretus
ENSG00000163694	RBM47	100	99.115	ENSMPUG00000006177	RBM47	94	97.306	Mustela_putorius_furo
ENSG00000163694	RBM47	100	94.470	ENSMLUG00000000889	RBM47	100	92.114	Myotis_lucifugus
ENSG00000163694	RBM47	100	97.696	ENSNGAG00000003325	Rbm47	100	94.118	Nannospalax_galili
ENSG00000163694	RBM47	100	82.946	ENSNBRG00000015092	rbm47	95	85.112	Neolamprologus_brichardi
ENSG00000163694	RBM47	100	100.000	ENSNLEG00000017151	RBM47	100	99.494	Nomascus_leucogenys
ENSG00000163694	RBM47	92	95.500	ENSMEUG00000009516	-	99	87.264	Notamacropus_eugenii
ENSG00000163694	RBM47	98	85.714	ENSOPRG00000016507	-	75	97.083	Ochotona_princeps
ENSG00000163694	RBM47	100	96.800	ENSODEG00000004873	RBM47	100	94.622	Octodon_degus
ENSG00000163694	RBM47	100	81.795	ENSONIG00000009061	rbm47	94	84.551	Oreochromis_niloticus
ENSG00000163694	RBM47	100	88.739	ENSOANG00000008978	RBM47	100	87.022	Ornithorhynchus_anatinus
ENSG00000163694	RBM47	100	96.789	ENSOCUG00000012034	RBM47	100	94.958	Oryctolagus_cuniculus
ENSG00000163694	RBM47	100	86.175	ENSORLG00000005847	rbm47	100	80.902	Oryzias_latipes
ENSG00000163694	RBM47	100	86.175	ENSORLG00020005154	rbm47	100	80.902	Oryzias_latipes_hni
ENSG00000163694	RBM47	100	86.636	ENSORLG00015000066	rbm47	100	81.167	Oryzias_latipes_hsok
ENSG00000163694	RBM47	100	86.636	ENSOMEG00000010730	rbm47	100	81.117	Oryzias_melastigma
ENSG00000163694	RBM47	100	98.618	ENSOGAG00000029367	-	100	97.306	Otolemur_garnettii
ENSG00000163694	RBM47	100	91.192	ENSOGAG00000025193	-	100	87.374	Otolemur_garnettii
ENSG00000163694	RBM47	100	98.305	ENSOARG00000012711	RBM47	100	89.112	Ovis_aries
ENSG00000163694	RBM47	100	100.000	ENSPPAG00000029763	RBM47	100	100.000	Pan_paniscus
ENSG00000163694	RBM47	100	99.115	ENSPPRG00000012873	RBM47	100	93.434	Panthera_pardus
ENSG00000163694	RBM47	91	91.089	ENSPTIG00000017046	RBM47	100	89.505	Panthera_tigris_altaica
ENSG00000163694	RBM47	100	100.000	ENSPTRG00000016006	RBM47	100	100.000	Pan_troglodytes
ENSG00000163694	RBM47	100	100.000	ENSPANG00000005980	RBM47	100	99.831	Papio_anubis
ENSG00000163694	RBM47	90	89.796	ENSPKIG00000005037	rbm47	95	84.225	Paramormyrops_kingsleyae
ENSG00000163694	RBM47	100	83.410	ENSPKIG00000013431	RBM47	92	86.119	Paramormyrops_kingsleyae
ENSG00000163694	RBM47	100	93.088	ENSPSIG00000017516	RBM47	97	90.226	Pelodiscus_sinensis
ENSG00000163694	RBM47	100	84.793	ENSPMGG00000018540	rbm47	100	74.415	Periophthalmus_magnuspinnatus
ENSG00000163694	RBM47	100	95.853	ENSPEMG00000011088	Rbm47	100	94.286	Peromyscus_maniculatus_bairdii
ENSG00000163694	RBM47	90	91.327	ENSPFOG00000007997	rbm47	94	82.778	Poecilia_formosa
ENSG00000163694	RBM47	100	84.793	ENSPLAG00000002072	rbm47	100	80.481	Poecilia_latipinna
ENSG00000163694	RBM47	100	85.253	ENSPMEG00000017492	rbm47	100	80.319	Poecilia_mexicana
ENSG00000163694	RBM47	100	85.253	ENSPREG00000008456	rbm47	100	80.749	Poecilia_reticulata
ENSG00000163694	RBM47	100	85.258	ENSPPYG00000014688	RBM47	98	84.682	Pongo_abelii
ENSG00000163694	RBM47	100	98.157	ENSPCAG00000011879	RBM47	81	97.500	Procavia_capensis
ENSG00000163694	RBM47	100	93.885	ENSPCOG00000023451	RBM47	100	93.098	Propithecus_coquereli
ENSG00000163694	RBM47	100	97.696	ENSPVAG00000003812	RBM47	100	95.638	Pteropus_vampyrus
ENSG00000163694	RBM47	100	82.687	ENSPNYG00000022868	rbm47	95	84.831	Pundamilia_nyererei
ENSG00000163694	RBM47	100	81.223	ENSPNAG00000007940	rbm47	95	84.637	Pygocentrus_nattereri
ENSG00000163694	RBM47	100	95.392	ENSRNOG00000002408	Rbm47	100	93.613	Rattus_norvegicus
ENSG00000163694	RBM47	100	100.000	ENSRBIG00000039601	RBM47	100	99.663	Rhinopithecus_bieti
ENSG00000163694	RBM47	100	100.000	ENSRROG00000044696	RBM47	100	99.663	Rhinopithecus_roxellana
ENSG00000163694	RBM47	100	98.618	ENSSBOG00000028475	RBM47	100	98.551	Saimiri_boliviensis_boliviensis
ENSG00000163694	RBM47	100	94.009	ENSSHAG00000017576	RBM47	100	91.414	Sarcophilus_harrisii
ENSG00000163694	RBM47	100	79.825	ENSSFOG00015012445	rbm47	94	80.800	Scleropages_formosus
ENSG00000163694	RBM47	100	83.420	ENSSFOG00015024101	RBM47	97	75.648	Scleropages_formosus
ENSG00000163694	RBM47	100	80.769	ENSSMAG00000009744	rbm47	94	82.486	Scophthalmus_maximus
ENSG00000163694	RBM47	100	85.714	ENSSDUG00000022684	rbm47	100	81.649	Seriola_dumerili
ENSG00000163694	RBM47	100	86.175	ENSSLDG00000003109	rbm47	100	81.383	Seriola_lalandi_dorsalis
ENSG00000163694	RBM47	100	98.618	ENSSARG00000001735	RBM47	75	95.759	Sorex_araneus
ENSG00000163694	RBM47	100	90.323	ENSSPUG00000007515	RBM47	100	91.176	Sphenodon_punctatus
ENSG00000163694	RBM47	100	86.636	ENSSPAG00000001257	rbm47	100	82.181	Stegastes_partitus
ENSG00000163694	RBM47	100	100.000	ENSSSCG00000008796	RBM47	100	96.639	Sus_scrofa
ENSG00000163694	RBM47	100	92.627	ENSTGUG00000008705	RBM47	100	89.950	Taeniopygia_guttata
ENSG00000163694	RBM47	100	85.253	ENSTRUG00000014050	rbm47	98	84.746	Takifugu_rubripes
ENSG00000163694	RBM47	100	81.654	ENSTNIG00000006127	rbm47	95	84.551	Tetraodon_nigroviridis
ENSG00000163694	RBM47	100	95.853	ENSTBEG00000001607	RBM47	76	90.909	Tupaia_belangeri
ENSG00000163694	RBM47	100	99.078	ENSTTRG00000002839	RBM47	100	95.966	Tursiops_truncatus
ENSG00000163694	RBM47	100	98.618	ENSUAMG00000021346	RBM47	100	96.801	Ursus_americanus
ENSG00000163694	RBM47	100	99.115	ENSVPAG00000000641	-	57	98.630	Vicugna_pacos
ENSG00000163694	RBM47	99	94.765	ENSVVUG00000014774	RBM47	100	93.456	Vulpes_vulpes
ENSG00000163694	RBM47	100	88.018	ENSXETG00000012802	rbm47	100	84.590	Xenopus_tropicalis
ENSG00000163694	RBM47	100	85.253	ENSXCOG00000000780	rbm47	100	80.481	Xiphophorus_couchianus
ENSG00000163694	RBM47	100	85.253	ENSXMAG00000009874	rbm47	100	80.053	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002244	hematopoietic progenitor cell differentiation	-	IEA	Process
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0016554	cytidine to uridine editing	-	IEA	Process

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Paralogs

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.