EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr2	28946485	Missense_Mutation	rs758960161	D614N	0.57
BLCA	chr2	28894868	In_Frame_Ins	novel	L58dup	0.44
BLCA	chr2	28942315	Missense_Mutation	novel	T580A	0.12
BLCA	chr2	28894801	Missense_Mutation	novel	D35H	0.38
BLCA	chr2	28929652	Missense_Mutation	novel	N460S	0.13
BLCA	chr2	28935575	Missense_Mutation	novel	P498S	0.34	Utp12
BRCA	chr2	28946758	In_Frame_Ins	novel	E671_N672insF	0.07
BRCA	chr2	28946759	Frame_Shift_Ins	novel	*N672Tfs75**	0.07
BRCA	chr2	28912667	Missense_Mutation	rs779467686	R188Q	0.2
BRCA	chr2	28929649	Missense_Mutation	rs752884679	T459M	0.4
BRCA	chr2	28946674	Silent	rs572315435	A643A	0.28
CESC	chr2	28946821	3'UTR	novel		0.36
CESC	chr2	28929666	Missense_Mutation	rs371667538	L465F	0.33
CESC	chr2	28942322	Nonsense_Mutation	NA	S582*	0.33
CESC	chr2	28906559	Missense_Mutation	rs768674240	V155I	0.43
CESC	chr2	28946704	Silent	novel	D653D	0.46
CESC	chr2	28925133	Nonsense_Mutation	novel	Q356*	0.39
COAD	chr2	28914089	Silent	rs776952806	T209T	0.39
COAD	chr2	28942318	Missense_Mutation	novel	A581T	0.28
COAD	chr2	28914089	Silent	rs776952806	T209T	0.26
COAD	chr2	28929650	Silent	rs756128959	T459T	0.27
COAD	chr2	28922931	Missense_Mutation	rs775251293	A288T	0.29
COAD	chr2	28912629	Silent	NA	C175C	0.25
COAD	chr2	28912648	Missense_Mutation	NA	M182V	0.4
ESCA	chr2	28927638	Missense_Mutation	rs780225617	I415V	0.24
ESCA	chr2	28946816	3'UTR	novel		0.11
GBM	chr2	28935594	Missense_Mutation	rs376467674	P504L	0.22	Utp12
GBM	chr2	28902117	Missense_Mutation	novel	K119T	0.25
HNSC	chr2	28935577	Silent	novel	P498P	0.37
HNSC	chr2	28946699	Missense_Mutation	novel	E652K	0.27
HNSC	chr2	28935527	Missense_Mutation	novel	L482F	0.19	Utp12
KIRC	chr2	28946714	Frame_Shift_Ins	novel	*A657Gfs4**	0.01
LAML	chr2	28927652	Silent	novel	P419P	0.04
LAML	chr2	28913666	Intron	novel		0.09
LIHC	chr2	28906567	Silent	NA	T157T	0.28
LIHC	chr2	28946474	Missense_Mutation	NA	D610V	0.35
LUAD	chr2	28941498	Missense_Mutation	NA	Q553L	0.65	Utp12
LUAD	chr2	28927599	Missense_Mutation	rs372117833	K402E	0.35
LUAD	chr2	28912658	Missense_Mutation	novel	S185L	0.06
LUAD	chr2	28912626	Silent	rs773673250	L174L	0.7
LUSC	chr2	28937994	Splice_Region	novel	T540T	0.23
LUSC	chr2	28925094	Missense_Mutation	novel	D343N	0.31
LUSC	chr2	28929588	Missense_Mutation	NA	E439Q	0.39
LUSC	chr2	28912692	Silent	novel	E196E	0.2
LUSC	chr2	28913674	Intron	novel		0.24
LUSC	chr2	28922918	Splice_Site	NA	X284_splice	0.22
LUSC	chr2	28929611	Silent	NA	D446D	0.53
LUSC	chr2	28929663	Missense_Mutation	NA	V464F	0.08
LUSC	chr2	28935530	Missense_Mutation	NA	Q483E	0.15	Utp12
OV	chr2	28941467	Missense_Mutation	NA	D543H	0.38	Utp12
OV	chr2	28912701	Nonsense_Mutation	novel	*V200Rfs12**	0.33
PAAD	chr2	28912667	Missense_Mutation	rs779467686	R188Q	0.27
PAAD	chr2	28929649	Missense_Mutation	rs752884679	T459M	0.28
READ	chr2	28926483	Missense_Mutation	novel	E368K	0.06
SKCM	chr2	28912622	Missense_Mutation	NA	S173F	0.36
SKCM	chr2	28929602	Silent	NA	G443G	0.15
SKCM	chr2	28929698	Silent	NA	F475F	0.26
SKCM	chr2	28941542	Missense_Mutation	NA	L568F	0.31	Utp12
SKCM	chr2	28927605	Missense_Mutation	novel	L404M	0.45
STAD	chr2	28914165	Missense_Mutation	NA	Y235H	0.08
STAD	chr2	28929650	Silent	rs756128959	T459T	0.24
STAD	chr2	28894866	Silent	NA	A56A	0.32
STAD	chr2	28914118	Missense_Mutation	NA	I219T	0.36
STAD	chr2	28927136	Intron	novel		0.17
STAD	chr2	28912685	Missense_Mutation	NA	V194G	0.47
STAD	chr2	28902034	Silent	NA	S91S	0.11
UCEC	chr2	28902002	Frame_Shift_Del	NA	*R83Gfs6**	0.22
UCEC	chr2	28929693	Missense_Mutation	rs768249711	D474N	0.28	Utp12
UCEC	chr2	28946496	Silent	novel	S617S	0.49
UCEC	chr2	28914193	Missense_Mutation	rs779329267	R244Q	0.37
UCEC	chr2	28942350	Silent	novel	P591P	0.23
UCEC	chr2	28917948	Missense_Mutation	NA	D268N	0.4
UCEC	chr2	28925038	Missense_Mutation	novel	K324R	0.03
UCEC	chr2	28941499	Silent	novel	Q553Q	0.51
UCEC	chr2	28906559	Missense_Mutation	rs768674240	V155I	0.35
UCEC	chr2	28946900	3'UTR	novel		0.4
UCEC	chr2	28941463	Splice_Region	novel	L541L	0.3
UCEC	chr2	28914140	Silent	NA	Q226Q	0.21
UCEC	chr2	28929646	Missense_Mutation	novel	Q458L	0.14
UCEC	chr2	28929693	Missense_Mutation	rs768249711	D474N	0.45	Utp12
UCEC	chr2	28946924	3'UTR	novel		0.5
UCEC	chr2	28946641	Missense_Mutation	novel	K632N	0.41
UCEC	chr2	28894747	Missense_Mutation	novel	V17I	0.42
UCEC	chr2	28929596	Silent	NA	R441R	0.38
UCEC	chr2	28946762	Nonsense_Mutation	novel	E673*	0.15
UCEC	chr2	28946732	Missense_Mutation	novel	N663H	0.56
UCEC	chr2	28927094	Intron	rs564921810		0.49
UCEC	chr2	28929693	Missense_Mutation	rs768249711	D474N	0.51	Utp12
UCEC	chr2	28936939	Missense_Mutation	novel	Q514H	0.05	Utp12
UCEC	chr2	28906509	Missense_Mutation	novel	S138N	0.34
UCEC	chr2	28906560	Missense_Mutation	novel	V155A	0.44
UCEC	chr2	28946723	Frame_Shift_Ins	novel	*K660Ifs4**	0.05
UCEC	chr2	28946724	In_Frame_Ins	novel	K660_E661insA	0.05
UCEC	chr2	28946782	3'UTR	novel		0.43
UCEC	chr2	28913696	Intron	rs182242313		0.36
UCEC	chr2	28924993	Missense_Mutation	novel	K309T	0.08
UCEC	chr2	28927116	Intron	novel		0.37
UCEC	chr2	28936945	Silent	novel	H516H	0.29
UCEC	chr2	28946723	Frame_Shift_Ins	novel	*K660Ifs4**	0.08
UCEC	chr2	28946724	In_Frame_Ins	novel	K660_E661insA	0.07
UCEC	chr2	28894759	Missense_Mutation	novel	F21I	0.16
UCEC	chr2	28946726	Nonsense_Mutation	NA	E661*	0.39
UCEC	chr2	28946726	Nonsense_Mutation	NA	E661*	0.41
UCEC	chr2	28926521	Silent	novel	C380C	0.15
UCEC	chr2	28902020	Missense_Mutation	novel	A87S	0.21
UCEC	chr2	28894822	Missense_Mutation	novel	E42K	0.39
UCEC	chr2	28929593	Missense_Mutation	novel	E440D	0.35
UCEC	chr2	28917930	Missense_Mutation	novel	M262V	0.5
UCEC	chr2	28925058	Missense_Mutation	novel	K331E	0.38
UCS	chr2	28935595	Silent	rs761868010	P504P	0.28

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
CESC	AMP	0.2271	0.099937
KIRP	DEL	0.0208	0.08832
PAAD	DEL	0.0924	0.2014
TGCT	AMP	0.26	0.0050216

Survival Analysis

Cancer	P-value	Q-value
SARC	0.00013	Kaplan-Meier Survival Analysis
MESO	0.00039	Kaplan-Meier Survival Analysis
ACC	0.00033	Kaplan-Meier Survival Analysis
HNSC	0.016	Kaplan-Meier Survival Analysis
PRAD	0.041	Kaplan-Meier Survival Analysis
LUSC	0.048	Kaplan-Meier Survival Analysis
KIRP	0.0016	Kaplan-Meier Survival Analysis
PAAD	0.0027	Kaplan-Meier Survival Analysis
CESC	0.016	Kaplan-Meier Survival Analysis
READ	0.032	Kaplan-Meier Survival Analysis
KICH	0.0057	Kaplan-Meier Survival Analysis
UCEC	0.00097	Kaplan-Meier Survival Analysis
GBM	0.022	Kaplan-Meier Survival Analysis
LIHC	0.00014	Kaplan-Meier Survival Analysis
LGG	0.037	Kaplan-Meier Survival Analysis
LUAD	0.029	Kaplan-Meier Survival Analysis
UVM	0.032	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

PRI

Literatures

Expression

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000163811 (Gene tree)
Gene ID: 23160
Gene Symbol: WDR43
Alias: KIAA0007|NET12|UTP5
Full Name: WD repeat domain 43
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 53,580 bases
Position: chr2:28,894,643-28,948,222
Accession: 28945
RBP type: canonical RBP
Summary: (WD Repeat Domain 43) is a Protein Coding gene. Diseases associated with WDR43 include North American Indian Childhood Cirrhosis and Treacher Collins Syndrome 1. Among its related pathways are rRNA processing in the nucleus and cytosol and Gene Expression. Gene Ontology (GO) annotations related to this gene include binding. An important paralog of this gene is WDR27.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000384302	Utp12	PF04003.12	4.2e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Protein-RNA interaction（RNA-Binding Site）

Click here to download all RNA binding sites

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
31128943	RNA Targets Ribogenesis Factor WDR43 to Chromatin for Transcription and Pluripotency Control.	Mol Cell	2019 Jul 11	Bi X	doi: 10.1016/j.molcel.2019.05.007

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000407426	WDR43-202	3533	-	ENSP00000384302	677 (aa)	-	Q15061
ENST00000296126	WDR43-201	787	-	ENSP00000296126	187 (aa)	-	C9IZK7
ENST00000466067	WDR43-206	628	-	-	- (aa)	-	-
ENST00000440983	WDR43-204	541	-	ENSP00000415355	147 (aa)	-	C9JEE7
ENST00000434238	WDR43-203	386	-	ENSP00000390363	25 (aa)	-	C9JH61
ENST00000446643	WDR43-205	579	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000163811's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03008	Ribosome biogenesis in eukaryotes	KEGG

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000163811	Autistic Disorder	3.1778000E-005	-
ENSG00000163811	Breast Neoplasms	5E-9	27117709
ENSG00000163811	Breast Neoplasms	3E-6	27117709

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000163811	rs4577244	2	28897867	C	Breast cancer (estrogen-receptor negative)	29058716	[1.05-1.11]	1.0869565	EFO_1000650
ENSG00000163811	rs67073037	2	28896719	?	Breast cancer	27117709	[1.04-1.15] (BRCA1 carriers)	1.0869565	EFO_0000305
ENSG00000163811	rs67073037	2	28896719	?	Breast cancer (estrogen-receptor negative)	27117709	[1.05-1.14]	1.0869565	EFO_1000650
ENSG00000163811	rs10676256	2	28907915	CA	Maximum cranial length	29698431	[0.59-1.51] unit increase	1.051	EFO_0009278

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000163811's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000163811	WDR43	100	57.823	ENSAPOG00000020303	wdr43	98	52.474	Acanthochromis_polyacanthus
ENSG00000163811	WDR43	100	96.257	ENSAMEG00000005150	WDR43	97	90.000	Ailuropoda_melanoleuca
ENSG00000163811	WDR43	100	56.150	ENSACIG00000010675	wdr43	100	50.440	Amphilophus_citrinellus
ENSG00000163811	WDR43	100	59.184	ENSAOCG00000006818	wdr43	93	55.702	Amphiprion_ocellaris
ENSG00000163811	WDR43	100	59.184	ENSAPEG00000000552	wdr43	100	53.001	Amphiprion_percula
ENSG00000163811	WDR43	100	56.684	ENSATEG00000010805	wdr43	100	52.269	Anabas_testudineus
ENSG00000163811	WDR43	100	83.673	ENSAPLG00000014314	WDR43	99	68.914	Anas_platyrhynchos
ENSG00000163811	WDR43	99	82.877	ENSACAG00000009264	WDR43	88	70.113	Anolis_carolinensis
ENSG00000163811	WDR43	100	100.000	ENSANAG00000035736	WDR43	100	97.640	Aotus_nancymaae
ENSG00000163811	WDR43	100	56.684	ENSACLG00000025675	wdr43	100	51.906	Astatotilapia_calliptera
ENSG00000163811	WDR43	92	73.913	ENSAMXG00000018623	wdr43	100	52.464	Astyanax_mexicanus
ENSG00000163811	WDR43	100	96.791	ENSBTAG00000018196	WDR43	100	90.029	Bos_taurus
ENSG00000163811	WDR43	100	100.000	ENSCJAG00000008946	WDR43	100	97.935	Callithrix_jacchus
ENSG00000163811	WDR43	100	95.187	ENSCAFG00000005253	WDR43	100	90.616	Canis_familiaris
ENSG00000163811	WDR43	100	95.187	ENSCAFG00020024035	WDR43	84	93.019	Canis_lupus_dingo
ENSG00000163811	WDR43	100	96.791	ENSCHIG00000006001	WDR43	100	90.762	Capra_hircus
ENSG00000163811	WDR43	99	92.466	ENSTSYG00000006448	WDR43	100	87.129	Carlito_syrichta
ENSG00000163811	WDR43	96	91.667	ENSCAPG00000014276	WDR43	100	71.119	Cavia_aperea
ENSG00000163811	WDR43	100	99.465	ENSCCAG00000028533	WDR43	100	97.640	Cebus_capucinus
ENSG00000163811	WDR43	100	100.000	ENSCATG00000031005	WDR43	100	98.525	Cercocebus_atys
ENSG00000163811	WDR43	100	96.257	ENSCLAG00000011898	WDR43	100	89.528	Chinchilla_lanigera
ENSG00000163811	WDR43	100	100.000	ENSCSAG00000010665	WDR43	100	98.592	Chlorocebus_sabaeus
ENSG00000163811	WDR43	100	96.257	ENSCHOG00000013830	WDR43	97	88.183	Choloepus_hoffmanni
ENSG00000163811	WDR43	99	86.897	ENSCPBG00000000374	WDR43	99	69.016	Chrysemys_picta_bellii
ENSG00000163811	WDR43	99	97.945	ENSCANG00000033059	WDR43	100	92.762	Colobus_angolensis_palliatus
ENSG00000163811	WDR43	100	94.652	ENSCGRG00001023204	Wdr43	100	87.243	Cricetulus_griseus_chok1gshd
ENSG00000163811	WDR43	100	94.652	ENSCGRG00000005070	Wdr43	99	86.184	Cricetulus_griseus_crigri
ENSG00000163811	WDR43	100	54.545	ENSCSEG00000016372	wdr43	98	53.719	Cynoglossus_semilaevis
ENSG00000163811	WDR43	91	56.716	ENSCVAG00000016604	wdr43	81	56.951	Cyprinodon_variegatus
ENSG00000163811	WDR43	96	70.833	ENSDARG00000077264	wdr43	100	52.709	Danio_rerio
ENSG00000163811	WDR43	100	97.326	ENSDNOG00000018841	WDR43	100	90.547	Dasypus_novemcinctus
ENSG00000163811	WDR43	100	93.583	ENSDORG00000000255	Wdr43	100	84.118	Dipodomys_ordii
ENSG00000163811	WDR43	73	99.301	ENSETEG00000004853	WDR43	71	99.301	Echinops_telfairi
ENSG00000163811	WDR43	99	58.904	ENSEBUG00000016586	wdr43	90	47.114	Eptatretus_burgeri
ENSG00000163811	WDR43	100	96.791	ENSEASG00005009046	WDR43	100	90.922	Equus_asinus_asinus
ENSG00000163811	WDR43	100	96.791	ENSECAG00000023777	WDR43	100	84.627	Equus_caballus
ENSG00000163811	WDR43	100	89.305	ENSEEUG00000006044	WDR43	82	86.667	Erinaceus_europaeus
ENSG00000163811	WDR43	88	81.818	ENSELUG00000019806	wdr43	96	55.572	Esox_lucius
ENSG00000163811	WDR43	100	94.118	ENSFCAG00000018872	WDR43	100	89.721	Felis_catus
ENSG00000163811	WDR43	100	85.034	ENSFALG00000011213	WDR43	100	67.822	Ficedula_albicollis
ENSG00000163811	WDR43	100	95.722	ENSFDAG00000007446	WDR43	100	89.233	Fukomys_damarensis
ENSG00000163811	WDR43	100	55.782	ENSFHEG00000021863	wdr43	98	53.073	Fundulus_heteroclitus
ENSG00000163811	WDR43	100	58.503	ENSGMOG00000001695	wdr43	100	52.765	Gadus_morhua
ENSG00000163811	WDR43	100	83.673	ENSGALG00000032529	WDR43	100	67.544	Gallus_gallus
ENSG00000163811	WDR43	100	56.463	ENSGAFG00000019525	wdr43	98	52.624	Gambusia_affinis
ENSG00000163811	WDR43	99	57.931	ENSGACG00000012843	wdr43	91	55.838	Gasterosteus_aculeatus
ENSG00000163811	WDR43	100	99.465	ENSGGOG00000015956	WDR43	100	99.409	Gorilla_gorilla
ENSG00000163811	WDR43	100	56.150	ENSHBUG00000011585	wdr43	96	51.906	Haplochromis_burtoni
ENSG00000163811	WDR43	100	95.187	ENSHGLG00000006912	WDR43	100	90.294	Heterocephalus_glaber_female
ENSG00000163811	WDR43	100	95.187	ENSHGLG00100007455	WDR43	100	90.294	Heterocephalus_glaber_male
ENSG00000163811	WDR43	100	55.102	ENSHCOG00000001160	wdr43	100	50.583	Hippocampus_comes
ENSG00000163811	WDR43	96	70.833	ENSIPUG00000015564	wdr43	100	53.275	Ictalurus_punctatus
ENSG00000163811	WDR43	100	97.326	ENSSTOG00000014687	WDR43	100	90.294	Ictidomys_tridecemlineatus
ENSG00000163811	WDR43	100	93.048	ENSJJAG00000012314	-	97	85.124	Jaculus_jaculus
ENSG00000163811	WDR43	100	91.444	ENSJJAG00000016353	-	100	82.448	Jaculus_jaculus
ENSG00000163811	WDR43	100	57.754	ENSKMAG00000009301	wdr43	100	52.457	Kryptolebias_marmoratus
ENSG00000163811	WDR43	100	56.463	ENSLBEG00000022773	wdr43	100	52.855	Labrus_bergylta
ENSG00000163811	WDR43	99	80.822	ENSLACG00000012425	WDR43	98	63.063	Latimeria_chalumnae
ENSG00000163811	WDR43	100	95.187	ENSLAFG00000005457	WDR43	99	91.558	Loxodonta_africana
ENSG00000163811	WDR43	100	100.000	ENSMFAG00000031243	WDR43	100	98.673	Macaca_fascicularis
ENSG00000163811	WDR43	100	100.000	ENSMMUG00000022268	WDR43	100	98.673	Macaca_mulatta
ENSG00000163811	WDR43	100	100.000	ENSMNEG00000035036	WDR43	100	98.525	Macaca_nemestrina
ENSG00000163811	WDR43	100	100.000	ENSMLEG00000022852	WDR43	98	88.253	Mandrillus_leucophaeus
ENSG00000163811	WDR43	100	57.219	ENSMAMG00000014056	wdr43	100	51.977	Mastacembelus_armatus
ENSG00000163811	WDR43	100	56.684	ENSMZEG00005009095	wdr43	100	51.906	Maylandia_zebra
ENSG00000163811	WDR43	100	84.354	ENSMGAG00000005248	WDR43	99	69.357	Meleagris_gallopavo
ENSG00000163811	WDR43	100	94.652	ENSMAUG00000007339	Wdr43	100	80.994	Mesocricetus_auratus
ENSG00000163811	WDR43	100	95.722	ENSMICG00000014276	WDR43	100	92.375	Microcebus_murinus
ENSG00000163811	WDR43	100	93.048	ENSMOCG00000017279	Wdr43	100	84.978	Microtus_ochrogaster
ENSG00000163811	WDR43	100	55.080	ENSMMOG00000004782	wdr43	90	52.562	Mola_mola
ENSG00000163811	WDR43	100	90.374	ENSMODG00000015545	WDR43	100	78.509	Monodelphis_domestica
ENSG00000163811	WDR43	90	53.846	ENSMALG00000007866	wdr43	85	52.696	Monopterus_albus
ENSG00000163811	WDR43	100	93.583	MGP_CAROLIEiJ_G0021861	Wdr43	100	85.272	Mus_caroli
ENSG00000163811	WDR43	100	94.118	ENSMUSG00000041057	Wdr43	100	84.831	Mus_musculus
ENSG00000163811	WDR43	100	94.652	MGP_PahariEiJ_G0020848	Wdr43	100	84.978	Mus_pahari
ENSG00000163811	WDR43	100	93.583	MGP_SPRETEiJ_G0022772	Wdr43	100	84.683	Mus_spretus
ENSG00000163811	WDR43	100	95.722	ENSMPUG00000017985	WDR43	100	89.605	Mustela_putorius_furo
ENSG00000163811	WDR43	100	94.118	ENSMLUG00000010666	WDR43	100	88.201	Myotis_lucifugus
ENSG00000163811	WDR43	100	95.722	ENSNGAG00000004446	Wdr43	100	87.500	Nannospalax_galili
ENSG00000163811	WDR43	100	56.684	ENSNBRG00000011062	wdr43	100	52.199	Neolamprologus_brichardi
ENSG00000163811	WDR43	100	100.000	ENSNLEG00000015361	WDR43	100	99.263	Nomascus_leucogenys
ENSG00000163811	WDR43	92	91.304	ENSOPRG00000007219	WDR43	100	73.422	Ochotona_princeps
ENSG00000163811	WDR43	100	96.791	ENSODEG00000006870	WDR43	100	90.133	Octodon_degus
ENSG00000163811	WDR43	100	56.684	ENSONIG00000019540	wdr43	100	52.493	Oreochromis_niloticus
ENSG00000163811	WDR43	100	87.166	ENSOANG00000014467	WDR43	100	73.147	Ornithorhynchus_anatinus
ENSG00000163811	WDR43	99	97.945	ENSOCUG00000003126	WDR43	94	87.297	Oryctolagus_cuniculus
ENSG00000163811	WDR43	100	54.545	ENSORLG00000018236	wdr43	100	51.105	Oryzias_latipes
ENSG00000163811	WDR43	100	54.545	ENSORLG00020008182	wdr43	100	50.957	Oryzias_latipes_hni
ENSG00000163811	WDR43	100	54.545	ENSORLG00015005256	wdr43	100	50.957	Oryzias_latipes_hsok
ENSG00000163811	WDR43	100	55.080	ENSOMEG00000009928	wdr43	92	50.808	Oryzias_melastigma
ENSG00000163811	WDR43	99	96.575	ENSOGAG00000009879	WDR43	97	91.176	Otolemur_garnettii
ENSG00000163811	WDR43	100	96.791	ENSOARG00000019566	WDR43	100	89.022	Ovis_aries
ENSG00000163811	WDR43	100	100.000	ENSPPAG00000041978	WDR43	100	99.502	Pan_paniscus
ENSG00000163811	WDR43	100	94.118	ENSPPRG00000001900	WDR43	100	87.463	Panthera_pardus
ENSG00000163811	WDR43	100	94.118	ENSPTIG00000005982	WDR43	100	87.683	Panthera_tigris_altaica
ENSG00000163811	WDR43	100	100.000	ENSPTRG00000011792	WDR43	100	99.705	Pan_troglodytes
ENSG00000163811	WDR43	100	100.000	ENSPANG00000018846	WDR43	100	98.673	Papio_anubis
ENSG00000163811	WDR43	100	55.026	ENSPKIG00000022935	wdr43	100	52.701	Paramormyrops_kingsleyae
ENSG00000163811	WDR43	100	80.214	ENSPSIG00000014217	WDR43	100	68.337	Pelodiscus_sinensis
ENSG00000163811	WDR43	100	55.319	ENSPMGG00000001169	wdr43	100	49.636	Periophthalmus_magnuspinnatus
ENSG00000163811	WDR43	100	94.118	ENSPEMG00000021715	Wdr43	100	86.411	Peromyscus_maniculatus_bairdii
ENSG00000163811	WDR43	98	72.222	ENSPMAG00000006054	wdr43	99	52.852	Petromyzon_marinus
ENSG00000163811	WDR43	100	92.513	ENSPCIG00000011948	WDR43	95	81.864	Phascolarctos_cinereus
ENSG00000163811	WDR43	100	57.143	ENSPFOG00000011371	wdr43	98	52.774	Poecilia_formosa
ENSG00000163811	WDR43	100	57.143	ENSPLAG00000002041	wdr43	98	52.994	Poecilia_latipinna
ENSG00000163811	WDR43	100	56.463	ENSPMEG00000020902	wdr43	98	52.624	Poecilia_mexicana
ENSG00000163811	WDR43	100	56.463	ENSPREG00000004959	wdr43	98	52.924	Poecilia_reticulata
ENSG00000163811	WDR43	100	100.000	ENSPPYG00000012526	WDR43	94	99.705	Pongo_abelii
ENSG00000163811	WDR43	96	91.667	ENSPCAG00000011610	WDR43	97	80.059	Procavia_capensis
ENSG00000163811	WDR43	100	95.187	ENSPCOG00000000476	WDR43	100	92.229	Propithecus_coquereli
ENSG00000163811	WDR43	96	100.000	ENSPVAG00000013850	WDR43	94	83.505	Pteropus_vampyrus
ENSG00000163811	WDR43	100	56.684	ENSPNYG00000023080	wdr43	100	51.906	Pundamilia_nyererei
ENSG00000163811	WDR43	96	70.833	ENSPNAG00000023664	wdr43	100	53.035	Pygocentrus_nattereri
ENSG00000163811	WDR43	100	94.118	ENSRNOG00000026316	Wdr43	100	85.377	Rattus_norvegicus
ENSG00000163811	WDR43	100	100.000	ENSRBIG00000026670	WDR43	100	98.378	Rhinopithecus_bieti
ENSG00000163811	WDR43	100	100.000	ENSRROG00000035929	WDR43	100	98.378	Rhinopithecus_roxellana
ENSG00000163811	WDR43	100	99.465	ENSSBOG00000021596	WDR43	100	97.198	Saimiri_boliviensis_boliviensis
ENSG00000163811	WDR43	100	90.909	ENSSHAG00000009672	WDR43	90	81.364	Sarcophilus_harrisii
ENSG00000163811	WDR43	99	57.979	ENSSFOG00015007173	wdr43	90	53.869	Scleropages_formosus
ENSG00000163811	WDR43	91	55.970	ENSSFOG00015004013	-	90	45.283	Scleropages_formosus
ENSG00000163811	WDR43	100	57.754	ENSSMAG00000015328	wdr43	100	51.684	Scophthalmus_maximus
ENSG00000163811	WDR43	100	57.754	ENSSDUG00000018532	wdr43	100	52.855	Seriola_dumerili
ENSG00000163811	WDR43	100	57.219	ENSSLDG00000015626	wdr43	94	55.041	Seriola_lalandi_dorsalis
ENSG00000163811	WDR43	96	100.000	ENSSARG00000013358	WDR43	78	93.173	Sorex_araneus
ENSG00000163811	WDR43	98	85.417	ENSSPUG00000006260	WDR43	100	66.715	Sphenodon_punctatus
ENSG00000163811	WDR43	100	57.143	ENSSPAG00000002830	wdr43	91	54.711	Stegastes_partitus
ENSG00000163811	WDR43	100	97.326	ENSSSCG00000008536	WDR43	100	90.469	Sus_scrofa
ENSG00000163811	WDR43	100	82.313	ENSTGUG00000005464	WDR43	100	65.821	Taeniopygia_guttata
ENSG00000163811	WDR43	100	57.823	ENSTRUG00000009764	wdr43	100	51.023	Takifugu_rubripes
ENSG00000163811	WDR43	100	58.503	ENSTNIG00000008907	wdr43	100	52.500	Tetraodon_nigroviridis
ENSG00000163811	WDR43	100	96.791	ENSTBEG00000007577	WDR43	99	92.939	Tupaia_belangeri
ENSG00000163811	WDR43	100	98.396	ENSTTRG00000008268	WDR43	84	90.547	Tursiops_truncatus
ENSG00000163811	WDR43	100	96.257	ENSUAMG00000015504	WDR43	100	90.776	Ursus_americanus
ENSG00000163811	WDR43	100	96.257	ENSUMAG00000020071	WDR43	100	90.776	Ursus_maritimus
ENSG00000163811	WDR43	96	91.667	ENSVPAG00000001632	WDR43	68	84.953	Vicugna_pacos
ENSG00000163811	WDR43	100	96.257	ENSVVUG00000002890	WDR43	98	93.344	Vulpes_vulpes
ENSG00000163811	WDR43	100	56.463	ENSXCOG00000011240	wdr43	88	55.712	Xiphophorus_couchianus
ENSG00000163811	WDR43	100	56.463	ENSXMAG00000018379	wdr43	98	52.174	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	24219289.	IDA	Component
GO:0003723	RNA binding	22658674.	HDA	Function
GO:0005515	protein binding	22916032.24219289.	IPI	Function
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005730	nucleolus	17699751.24219289.	IDA	Component
GO:0006364	rRNA processing	-	TAS	Process
GO:0045943	positive regulation of transcription by RNA polymerase I	17699751.	IMP	Process
GO:2000234	positive regulation of rRNA processing	17699751.	IMP	Process

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

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Pathways

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.