EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq
BLCA	chr3	45968533	Silent	novel	V267V	0.33
BLCA	chr3	45967405	Silent	rs200743505	Q643Q	0.57
BLCA	chr3	45965104	Missense_Mutation	NA	S1027C	0.23
BLCA	chr3	45967543	Missense_Mutation	novel	E597D	0.15
BLCA	chr3	45966963	Nonsense_Mutation	novel	Q791*	0.36
BLCA	chr3	45966313	Silent	NA	L1007L	0.33
BLCA	chr3	45984856	Missense_Mutation	novel	D19H	0.31
BLCA	chr3	45959516	Nonsense_Mutation	novel	S1155*	0.22
BLCA	chr3	45959422	Silent	novel	F1186F	0.39
BRCA	chr3	45966384	Missense_Mutation	NA	Q984E	0.18
BRCA	chr3	45923760	Silent	novel	L1419L	0.07
BRCA	chr3	45966786	Missense_Mutation	NA	E850Q	0.11
BRCA	chr3	45967222	Silent	NA	S704S	0.07
BRCA	chr3	45968679	Missense_Mutation	NA	D219H	0.28
BRCA	chr3	45984854	Splice_Site	novel	X19_splice	0.14
BRCA	chr3	45966581	Missense_Mutation	NA	E918A	0.26
BRCA	chr3	45984903	Missense_Mutation	novel	S3C	0.08
BRCA	chr3	45962270	Missense_Mutation	rs140583835	N1131T	0.05
BRCA	chr3	45966589	Silent	NA	L915L	0.1
BRCA	chr3	45931163	Missense_Mutation	NA	T1387A	0.18
CESC	chr3	45967810	Silent	novel	V508V	0.32
CESC	chr3	45967093	Silent	NA	L747L	0.4
CESC	chr3	45958472	Missense_Mutation	NA	S1245R	0.38
CESC	chr3	45966874	Silent	novel	L820L	0.8
CESC	chr3	45967497	Missense_Mutation	NA	E613K	0.47
CESC	chr3	45968325	Silent	novel	L337L	0.41
CESC	chr3	45968490	Missense_Mutation	rs201358723	R282C	0.43
CESC	chr3	45968580	Missense_Mutation	rs774439678	R252C	0.4
CESC	chr3	45973180	Silent	novel	D149D	0.38
CESC	chr3	45967476	Missense_Mutation	NA	E620K	0.38
CESC	chr3	45923715	In_Frame_Del	novel	I1432_G1434del	0.24
CESC	chr3	45967311	Missense_Mutation	novel	D675N	0.38
CHOL	chr3	45921587	3'UTR	novel		0.83
COAD	chr3	45936494	Missense_Mutation	rs759599621	V1332M	0.59
COAD	chr3	45955364	Missense_Mutation	rs748475750	D1277N	0.35
COAD	chr3	45931117	Missense_Mutation	NA	S1402N	0.23
COAD	chr3	45966599	Missense_Mutation	novel	V912A	0.12
COAD	chr3	45931271	Missense_Mutation	novel	P1351S	0.29
COAD	chr3	45921820	Missense_Mutation	novel	F1461C	0.15
COAD	chr3	45968282	Missense_Mutation	novel	L351P	0.24
COAD	chr3	45921585	3'UTR	novel		0.47
COAD	chr3	45969703	Missense_Mutation	NA	M201T	0.18
COAD	chr3	45921698	3'UTR	novel		0.31
COAD	chr3	45967585	Missense_Mutation	NA	E583D	0.37
COAD	chr3	45967919	Missense_Mutation	rs533441275	R472Q	0.31
COAD	chr3	45923673	Silent	rs202242942	F1448F	0.08
COAD	chr3	45975241	Splice_Region	NA	T131T	0.19
COAD	chr3	45967082	Frame_Shift_Ins	NA	*K751Rfs12**	0.42
COAD	chr3	45923678	Missense_Mutation	novel	I1447V	0.55
COAD	chr3	45968586	Missense_Mutation	rs142017802	R250W	0.47
COAD	chr3	45967952	Missense_Mutation	NA	G461V	0.21
COAD	chr3	45931251	Silent	rs373785569	I1357I	0.11
COAD	chr3	45931241	Missense_Mutation	rs149020169	G1361R	0.29
GBM	chr3	45968029	Silent	novel	L435L	0.14
GBM	chr3	45931274	Missense_Mutation	novel	V1350I	0.21
GBM	chr3	45973184	Missense_Mutation	rs149818406	S148L	0.43
GBM	chr3	45962253	Missense_Mutation	novel	L1137F	0.11
HNSC	chr3	45966682	Silent	rs771633712	S884S	0.33
HNSC	chr3	45966683	Missense_Mutation	novel	S884F	0.3
HNSC	chr3	45958562	Silent	rs751989736	H1215H	0.38
HNSC	chr3	45968162	Missense_Mutation	novel	P391R	0.13
HNSC	chr3	45984921	5'UTR	novel		0.5
HNSC	chr3	45966790	Silent	novel	C848C	0.3
HNSC	chr3	45967783	Silent	novel	F517F	0.24
KIRP	chr3	45967332	Missense_Mutation	NA	A668T	0.43
KIRP	chr3	45931077	Missense_Mutation	novel	Q1415H	0.37
KIRP	chr3	45958595	Nonsense_Mutation	NA	Y1204*	0.54
KIRP	chr3	45968365	Missense_Mutation	NA	E323D	0.22
KIRP	chr3	45968476	Silent	NA	E286E	0.24
LAML	chr3	45973229	Missense_Mutation	novel	D133G	0.05
LGG	chr3	45973129	Silent	rs149291592	S166S	0.25
LGG	chr3	45921688	3'UTR	novel		0.46
LGG	chr3	45923702	Missense_Mutation	rs779810632	R1439C	0.41
LGG	chr3	45967174	Silent	novel	Q720Q	0.08
LGG	chr3	45981678	Splice_Site	NA	X19_splice	0.48
LIHC	chr3	45967082	Missense_Mutation	novel	K751R	0.29
LIHC	chr3	45959438	Missense_Mutation	rs764117873	D1181G	0.3
LIHC	chr3	45965107	Missense_Mutation	NA	K1026E	0.22
LIHC	chr3	45969764	Missense_Mutation	rs773759736	R181G	0.52
LIHC	chr3	45936450	Splice_Region	novel	L1346L	0.55
LIHC	chr3	45968604	Missense_Mutation	novel	V244M	0.4
LIHC	chr3	45967149	Nonsense_Mutation	NA	E729*	0.08
LUAD	chr3	45931175	Missense_Mutation	rs184524046	E1383K	0.16
LUAD	chr3	45968023	Silent	rs756216367	L437L	0.06
LUAD	chr3	45966936	Missense_Mutation	rs200646936	R800W	0.31
LUAD	chr3	45967834	Missense_Mutation	novel	E500D	0.08
LUAD	chr3	45967590	Missense_Mutation	NA	Q582K	0.09
LUAD	chr3	45979734	Missense_Mutation	NA	G87W	0.29
LUAD	chr3	45966540	Missense_Mutation	NA	E932Q	0.16
LUAD	chr3	45967765	Silent	NA	A523A	0.24
LUAD	chr3	45967242	Missense_Mutation	NA	K698E	0.11
LUAD	chr3	45965103	Missense_Mutation	NA	S1027I	0.08
LUAD	chr3	45981635	Nonsense_Mutation	NA	E33*	0.11
LUAD	chr3	45931240	Missense_Mutation	novel	G1361V	0.44
LUAD	chr3	45973161	Nonsense_Mutation	NA	E156*	0.42
LUAD	chr3	45967770	Silent	NA	L522L	0.33
LUAD	chr3	45966585	Missense_Mutation	novel	V917L	0.24
LUAD	chr3	45968186	Missense_Mutation	novel	S383L	0.09
LUSC	chr3	45966587	Missense_Mutation	novel	T916I	0.19
LUSC	chr3	45967803	Missense_Mutation	novel	L511V	0.04
LUSC	chr3	45967448	Missense_Mutation	novel	V629A	0.12
LUSC	chr3	45968600	Missense_Mutation	NA	R245L	0.43
LUSC	chr3	45936544	Splice_Site	novel	X1315_splice	0.34
LUSC	chr3	45955358	Missense_Mutation	novel	V1279L	0.25
LUSC	chr3	45967141	Missense_Mutation	novel	R731S	0.4
LUSC	chr3	45973183	Silent	novel	S148S	0.22
LUSC	chr3	45959409	Missense_Mutation	rs773967962	R1191W	0.66
LUSC	chr3	45967674	Nonsense_Mutation	novel	E554*	0.56
LUSC	chr3	45979771	Silent	novel	F74F	0.15
LUSC	chr3	45968145	Missense_Mutation	novel	A397S	0.42
LUSC	chr3	45967108	Silent	novel	Q742Q	0.2
OV	chr3	45962382	Nonsense_Mutation	novel	E1094*	0.07
OV	chr3	45962330	Missense_Mutation	NA	Q1111R	0.28
OV	chr3	45955331	Silent	novel	L1288L	0.08
OV	chr3	45962299	Missense_Mutation	novel	Q1121H	0.05
OV	chr3	45962292	Missense_Mutation	novel	L1124F	0.07
PAAD	chr3	45966542	Missense_Mutation	novel	Q931R	0.1
PAAD	chr3	45966862	Missense_Mutation	novel	K824N	0.08
PAAD	chr3	45967014	Missense_Mutation	novel	S774P	0.2
PAAD	chr3	45968270	Missense_Mutation	rs764385006	R355Q	0.21
PRAD	chr3	45979709	Missense_Mutation	NA	S95L	0.28
READ	chr3	45975302	Missense_Mutation	novel	S111F	0.38
READ	chr3	45967805	Missense_Mutation	novel	S510Y	0.19
READ	chr3	45973165	Silent	novel	L154L	0.4
SARC	chr3	45973146	Nonsense_Mutation	novel	Q161*	0.15
SARC	chr3	45921716	3'UTR	novel		0.53
SKCM	chr3	45967598	Missense_Mutation	NA	S579F	0.31
SKCM	chr3	45968307	Missense_Mutation	NA	M343V	0.26
SKCM	chr3	45968375	Missense_Mutation	NA	Q320L	0.44
SKCM	chr3	45967888	Silent	NA	S482S	0.42
SKCM	chr3	45931268	Missense_Mutation	NA	L1352F	0.23
SKCM	chr3	45981576	Silent	NA	L52L	0.18
SKCM	chr3	45968008	Silent	NA	R442R	0.08
SKCM	chr3	45979710	Missense_Mutation	NA	S95A	0.31
SKCM	chr3	45984878	Silent	novel	Q11Q	0.41
SKCM	chr3	45968226	Missense_Mutation	novel	G370C	0.17
SKCM	chr3	45967254	Nonsense_Mutation	NA	Q694*	0.54
SKCM	chr3	45967917	Silent	NA	L473L	0.22
SKCM	chr3	45973127	Missense_Mutation	novel	R167K	0.22
SKCM	chr3	45973129	Silent	rs149291592	S166S	0.13
SKCM	chr3	45968260	Silent	NA	L358L	0.19
SKCM	chr3	45973130	Missense_Mutation	NA	S166L	0.54
SKCM	chr3	45966637	Silent	novel	H899H	0.21
SKCM	chr3	45967609	Silent	NA	V575V	0.33
SKCM	chr3	45967230	Silent	novel	L702L	0.39
SKCM	chr3	45967822	Silent	NA	L504L	0.11
SKCM	chr3	45959529	Missense_Mutation	rs375082007	L1151F	0.55
SKCM	chr3	45966985	Silent	NA	G783G	0.27
SKCM	chr3	45966978	Nonsense_Mutation	NA	Q786*	0.38
SKCM	chr3	45931123	Missense_Mutation	NA	S1400F	0.19
SKCM	chr3	45969680	Silent	NA	L209L	0.36
SKCM	chr3	45981644	Missense_Mutation	NA	E30K	0.37
SKCM	chr3	45968057	Missense_Mutation	novel	A426V	0.48
STAD	chr3	45923702	Missense_Mutation	rs779810632	R1439C	0.39
STAD	chr3	45966577	Missense_Mutation	novel	K919N	0.17
STAD	chr3	45966975	Missense_Mutation	rs200040076	R787W	0.18
STAD	chr3	45966767	Missense_Mutation	NA	Q856R	0.29
STAD	chr3	45967213	Silent	rs761520600	G707G	0.08
STAD	chr3	45968012	Missense_Mutation	rs781455175	A441V	0.3
STAD	chr3	45967287	Missense_Mutation	NA	A683P	0.05
STAD	chr3	45969714	Silent	NA	R197R	0.32
STAD	chr3	45973132	Silent	rs139730012	A165A	0.3
STAD	chr3	45966747	Missense_Mutation	novel	A863T	0.24
STAD	chr3	45966586	Silent	rs142981160	T916T	0.1
STAD	chr3	45967546	Missense_Mutation	NA	Q596H	0.3
STAD	chr3	45967600	Missense_Mutation	NA	N578K	0.22
STAD	chr3	45967517	Missense_Mutation	NA	Q606R	0.05
STAD	chr3	45967859	Missense_Mutation	NA	R492Q	0.07
STAD	chr3	45975306	Missense_Mutation	rs570357544	Y110H	0.21
STAD	chr3	45966529	Silent	rs559343345	D935D	0.22
STAD	chr3	45923727	In_Frame_Del	rs774142616	E1430del	0.3
STAD	chr3	45967213	Silent	rs761520600	G707G	0.13
STAD	chr3	45968465	Missense_Mutation	rs146311777	R290H	0.28
THCA	chr3	45966787	Silent	novel	S849S	0.22
THYM	chr3	45918024	3'UTR	novel		0.4
UCEC	chr3	45955361	Missense_Mutation	NA	A1278T	0.34
UCEC	chr3	45964389	Silent	rs759277391	A1072A	0.24
UCEC	chr3	45955361	Missense_Mutation	NA	A1278T	0.45
UCEC	chr3	45968627	Missense_Mutation	rs143360825	R236Q	0.4
UCEC	chr3	45975256	Missense_Mutation	NA	M126I	0.29
UCEC	chr3	45981572	Missense_Mutation	NA	Q54K	0.29
UCEC	chr3	45962316	Missense_Mutation	rs752948012	R1116C	0.31
UCEC	chr3	45920853	3'UTR	novel		0.33
UCEC	chr3	45967447	Silent	rs140372149	V629V	0.43
UCEC	chr3	45984957	5'UTR	novel		0.34
UCEC	chr3	45923702	Missense_Mutation	rs779810632	R1439C	0.23
UCEC	chr3	45962377	Silent	rs566962787	L1095L	0.26
UCEC	chr3	45981601	Missense_Mutation	NA	K44T	0.34
UCEC	chr3	45915434	3'Flank	novel		0.47
UCEC	chr3	45918284	3'UTR	novel		0.64
UCEC	chr3	45920721	3'UTR	novel		0.42
UCEC	chr3	45921577	3'UTR	novel		0.55
UCEC	chr3	45968656	Silent	rs140730556	N226N	0.17
UCEC	chr3	45966327	Missense_Mutation	NA	L1003I	0.36
UCEC	chr3	45968010	Missense_Mutation	rs758169793	R442W	0.32
UCEC	chr3	45979746	Nonsense_Mutation	novel	G83*	0.44
UCEC	chr3	45966334	Silent	rs749895806	L1000L	0.31
UCEC	chr3	45967989	Missense_Mutation	novel	V449M	0.28
UCEC	chr3	45921633	3'UTR	novel		0.37
UCEC	chr3	45966847	Silent	novel	Q829Q	0.35
UCEC	chr3	45915666	3'Flank	novel		0.33
UCEC	chr3	45918205	3'UTR	novel		0.09
UCEC	chr3	45959406	Missense_Mutation	NA	R1192W	0.26
UCEC	chr3	45966553	Silent	NA	A927A	0.15
UCEC	chr3	45968043	Missense_Mutation	NA	L431M	0.23
UCEC	chr3	45968537	Missense_Mutation	novel	A266D	0.08
UCEC	chr3	45969734	Missense_Mutation	NA	L191M	0.1
UCEC	chr3	45966417	Missense_Mutation	rs369064639	G973S	0.54
UCEC	chr3	45931098	Silent	NA	A1408A	0.36
UCEC	chr3	45921573	3'UTR	novel		0.47
UCEC	chr3	45964390	Missense_Mutation	rs148445016	A1072V	0.44
UCEC	chr3	45966472	Silent	NA	L954L	0.3
UCEC	chr3	45967259	Missense_Mutation	NA	K692R	0.4
UCEC	chr3	45915563	3'Flank	rs72622922		0.41
UCEC	chr3	45975309	Missense_Mutation	NA	R109C	0.45
UCEC	chr3	45966553	Silent	NA	A927A	0.15
UCEC	chr3	45967489	Silent	novel	R615R	0.12
UCEC	chr3	45968422	Silent	novel	V304V	0.2
UCEC	chr3	45966372	Missense_Mutation	rs752559420	R988W	0.36
UCEC	chr3	45966504	Nonsense_Mutation	rs755404037	R944*	0.27
UCEC	chr3	45968579	Missense_Mutation	rs199708461	R252H	0.49
UCEC	chr3	45985020	Splice_Region	novel		0.28
UCEC	chr3	45923680	Missense_Mutation	novel	L1446P	0.08
UCEC	chr3	45966832	Missense_Mutation	novel	N834K	0.36
UCEC	chr3	45966524	Missense_Mutation	novel	K937T	0.67
UCEC	chr3	45967531	Silent	rs766544615	D601D	0.29
UCEC	chr3	45920614	3'UTR	novel		0.5
UCEC	chr3	45967112	Missense_Mutation	novel	T741I	0.36
UCEC	chr3	45968317	Silent	novel	R339R	0.22
UCEC	chr3	45981653	Missense_Mutation	novel	E27K	0.43
UCEC	chr3	45917905	3'UTR	novel		0.33
UCEC	chr3	45966582	Nonsense_Mutation	novel	E918*	0.65
UCEC	chr3	45958611	Missense_Mutation	novel	G1199D	0.41
UCEC	chr3	45915650	3'Flank	novel		0.33
UCEC	chr3	45984876	Missense_Mutation	novel	R12I	0.38
UCEC	chr3	45955329	Missense_Mutation	novel	L1288F	0.4
UCEC	chr3	45967209	Missense_Mutation	rs775675242	C709R	0.38
UCEC	chr3	45923673	Silent	rs202242942	F1448F	0.43
UCEC	chr3	45958577	Silent	rs751074781	Y1210Y	0.48
UCEC	chr3	45967006	Silent	rs368345401	A776A	0.31
UCEC	chr3	45921836	Missense_Mutation	novel	V1456F	0.33
UCEC	chr3	45968580	Missense_Mutation	rs774439678	R252C	0.33
UCEC	chr3	45975309	Missense_Mutation	NA	R109C	0.26
UCEC	chr3	45967671	Missense_Mutation	rs557259410	R555W	0.29
UCEC	chr3	45967290	Silent	NA	L682L	0.27
UCEC	chr3	45975297	Missense_Mutation	NA	V113L	0.31
UCEC	chr3	45984931	5'UTR	novel		0.28
UCEC	chr3	45968263	Silent	novel	S357S	0.22
UCEC	chr3	45921686	3'UTR	novel		0.14
UCEC	chr3	45966891	Missense_Mutation	novel	M815V	0.44
UCEC	chr3	45915459	3'Flank	novel		0.1
UCEC	chr3	45968395	Missense_Mutation	novel	K313N	0.39
UCEC	chr3	45920563	3'UTR	novel		0.36
UCEC	chr3	45967146	Missense_Mutation	novel	L730I	0.12
UCEC	chr3	45979811	Missense_Mutation	novel	A61V	0.21
UCEC	chr3	45959430	Missense_Mutation	rs760469053	R1184W	0.28
UCEC	chr3	45913161	3'Flank	novel		0.34
UCEC	chr3	45973200	Nonsense_Mutation	NA	Q143*	0.38
UCEC	chr3	45921818	Missense_Mutation	NA	Y1462H	0.52
UCEC	chr3	45966788	Missense_Mutation	rs766344445	S849L	0.28
UCEC	chr3	45967923	Nonsense_Mutation	rs768945306	R471*	0.44
UCEC	chr3	45981653	Nonsense_Mutation	NA	E27*	0.07
UCEC	chr3	45984907	Missense_Mutation	NA	A2P	0.1
UCEC	chr3	45962274	Missense_Mutation	novel	L1130I	0.15
UCEC	chr3	45966529	Silent	rs559343345	D935D	0.31
UCEC	chr3	45966594	Missense_Mutation	novel	A914T	0.37
UCEC	chr3	45921597	3'UTR	novel		0.29
UCEC	chr3	45967287	Missense_Mutation	novel	A683S	0.4
UCEC	chr3	45968271	Missense_Mutation	rs35937665	R355W	0.13
UCEC	chr3	45920613	3'UTR	novel		0.44
UCEC	chr3	45968088	Missense_Mutation	novel	K416E	0.34
UCEC	chr3	45968271	Missense_Mutation	rs35937665	R355W	0.27
UCEC	chr3	45968358	Missense_Mutation	rs752168800	A326T	0.24
UCEC	chr3	45968490	Missense_Mutation	rs201358723	R282C	0.34
UCEC	chr3	45920955	3'UTR	rs778420399		0.3
UCEC	chr3	45975309	Missense_Mutation	NA	R109C	0.48

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
CHOL	DEL	0.8056	0.02241
DLBC	DEL	0.125	0.016959
GBM	DEL	0.0763	0.056565
LGG	DEL	0.0819	0.00089193
LUAD	DEL	0.3353	0.0021265
PAAD	DEL	0.1793	0.030662
SARC	DEL	0.1984	0.0034746
SKCM	DEL	0.1635	0.13887
TGCT	DEL	0.2	0.08422
THYM	DEL	0.0894	0.037527

Survival Analysis

Cancer	P-value	Q-value
KIRC	0.0001	Kaplan-Meier Survival Analysis
SARC	0.02	Kaplan-Meier Survival Analysis
MESO	0.00017	Kaplan-Meier Survival Analysis
ACC	0.00077	Kaplan-Meier Survival Analysis
HNSC	0.036	Kaplan-Meier Survival Analysis
ESCA	0.035	Kaplan-Meier Survival Analysis
KIRP	0.0034	Kaplan-Meier Survival Analysis
LAML	0.0059	Kaplan-Meier Survival Analysis
UCEC	0.0068	Kaplan-Meier Survival Analysis
LUAD	0.00032	Kaplan-Meier Survival Analysis
UVM	0.018	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBPome

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Gene Ontology

Description

Ensembl ID: ENSG00000163820 (Gene tree)
Gene ID: 79443
Gene Symbol: FYCO1
Alias: FLJ13335|ZFYVE7
Full Name: FYVE and coiled-coil domain containing 1
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 77,926 bases
Position: chr3:45,917,899-45,995,824
Accession: 14673
RBP type: non-canonical RBP
Summary: This gene encodes a protein that contains a RUN domain, FYVE-type zinc finger domain and Golgi dynamics (GOLD) domain. The encoded protein plays a role in microtubule plus end-directed transport of autophagic vesicles through interactions with the small GTPase Rab7, phosphatidylinositol-3-phosphate (PI3P) and the autophagosome marker LC3. Mutations in this gene are a cause of autosomal recessive congenital cataract-2 (CATC2). [provided by RefSeq, Dec 2011]

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000535325	FYCO1-205	8578	-	ENSP00000441178	1498 (aa)	-	Q9BQS8
ENST00000433878	FYCO1-202	4317	-	ENSP00000388136	267 (aa)	-	H7BZ74
ENST00000438446	FYCO1-203	1072	-	ENSP00000398517	149 (aa)	-	C9J2W6
ENST00000471739	FYCO1-204	545	-	-	- (aa)	-	-
ENST00000296137	FYCO1-201	8504	XM_006713333	ENSP00000296137	1478 (aa)	XP_006713396	Q9BQS8

Gene Model

Click here to download ENSG00000163820's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000163820	Behcet Syndrome	8.01603721286302E-05	20622878
ENSG00000163820	monocyte chemoattractant protein 1 (66-77)	9.7100000E-005	-

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000163820	rs202063506	3	45984720	AT	Monocyte chemoattractant protein-1 levels	27989323	[0.089-0.154] SD units increase	0.1215	EFO_0004749

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000163820's network

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	20100911.20562859.23455924.24089205.25855459.	IPI	Function
GO:0005764	lysosome	21873635.	IBA	Component
GO:0005764	lysosome	20100911.	IDA	Component
GO:0005770	late endosome	21873635.	IBA	Component
GO:0005770	late endosome	20100911.	IDA	Component
GO:0005776	autophagosome	21873635.	IBA	Component
GO:0005776	autophagosome	20100911.	IDA	Component
GO:0005794	Golgi apparatus	-	IDA	Component
GO:0016020	membrane	19946888.	HDA	Component
GO:0043231	intracellular membrane-bounded organelle	-	IDA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0072383	plus-end-directed vesicle transport along microtubule	21873635.	IBA	Process
GO:0072383	plus-end-directed vesicle transport along microtubule	20100911.	IMP	Process
GO:1901098	positive regulation of autophagosome maturation	21873635.	IBA	Process
GO:1901098	positive regulation of autophagosome maturation	26468287.	IMP	Process

EuRBPDB

Note: to get the extension of tumor abbreviations.

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Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBPome

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.