Cancer | Chr | Position | Mutation Type | dbSNP | Protein-change | Allele Freq | RBD |
---|---|---|---|---|---|---|---|
BLCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
ESCA | |||||||
HNSC | |||||||
HNSC | |||||||
HNSC | |||||||
HNSC | |||||||
LUAD | |||||||
LUSC | |||||||
LUSC | |||||||
OV | |||||||
OV | |||||||
SARC | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC |
Cancer | Type | Freq | Q-value |
---|---|---|---|
BLCA | |||
KIRC | |||
KIRP | |||
LUAD | |||
PAAD | |||
SARC | |||
TGCT |
Cancer | P-value | Q-value |
---|---|---|
ACC | ||
PAAD | ||
LAML | ||
UCEC | ||
GBM | ||
LIHC | ||
DLBC | ||
LGG | ||
THCA | ||
LUAD | ||
UVM | ||
OV |
Protein ID | Domain | Pfam ID | E-value | Domain number | Total number |
---|---|---|---|---|---|
ENSP00000296277 | Ribosomal_L39 | PF00832.20 | 4.2e-22 | 1 | 1 |
ENSP00000389356 | Ribosomal_L39 | PF00832.20 | 4.2e-22 | 1 | 1 |
ENSP00000397240 | Ribosomal_L39 | PF00832.20 | 4.2e-22 | 1 | 1 |
Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENST00000296277 | RPL39L-201 | 756 | - | ENSP00000296277 | 51 (aa) | - | Q96EH5 |
ENST00000455270 | RPL39L-203 | 653 | - | ENSP00000397240 | 51 (aa) | - | Q96EH5 |
ENST00000433055 | RPL39L-202 | 749 | - | ENSP00000389356 | 51 (aa) | - | Q96EH5 |
ensgID | SNP | Chromosome | Position | SNP-risk | Trait | PubmedID | 95% CI | Or or BEAT | EFO ID |
---|---|---|---|---|---|---|---|---|---|
ENSG00000163923 | rs16861629 | 3 | 187121427 | ? | Adolescent idiopathic scoliosis | 30019117 | EFO_0005423 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Paralog | Gene Symbol | Coverage | Identiy |
---|---|---|---|---|---|---|---|
ENSG00000163923 | RPL39L | 100 | 92.157 | ENSG00000198918 | RPL39 | 100 | 92.157 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSG00000163923 | RPL39L | 100 | 92.157 | ENSCJAG00000042864 | - | 100 | 92.157 | Callithrix_jacchus |
ENSG00000163923 | RPL39L | 100 | 72.549 | ENSCJAG00000045312 | - | 100 | 72.549 | Callithrix_jacchus |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSCSAG00000018929 | RPL39L | 100 | 98.039 | Chlorocebus_sabaeus |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSCANG00000015756 | RPL39L | 100 | 98.039 | Colobus_angolensis_palliatus |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSGGOG00000039881 | RPL39L | 100 | 98.039 | Gorilla_gorilla |
ENSG00000163923 | RPL39L | 100 | 86.275 | ENSGGOG00000037933 | - | 100 | 86.275 | Gorilla_gorilla |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSMFAG00000012432 | RPL39L | 100 | 98.039 | Macaca_fascicularis |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSMMUG00000045578 | RPL39L | 100 | 98.039 | Macaca_mulatta |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSMNEG00000002491 | RPL39L | 100 | 98.039 | Macaca_nemestrina |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSNLEG00000032768 | RPL39L | 100 | 98.039 | Nomascus_leucogenys |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSPPAG00000001747 | RPL39L | 100 | 98.039 | Pan_paniscus |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSPTRG00000052452 | RPL39L | 100 | 98.039 | Pan_troglodytes |
ENSG00000163923 | RPL39L | 100 | 96.078 | ENSPPYG00000014389 | RPL39L | 100 | 96.078 | Pongo_abelii |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSRBIG00000029733 | RPL39L | 100 | 98.039 | Rhinopithecus_bieti |
ENSG00000163923 | RPL39L | 100 | 98.039 | ENSRROG00000016550 | RPL39L | 100 | 98.039 | Rhinopithecus_roxellana |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0003735 | structural constituent of ribosome | - | IEA | Function |
GO:0005515 | protein binding | 25416956. | IPI | Function |
GO:0006412 | translation | - | IEA | Process |
GO:0007283 | spermatogenesis | 12490704. | IEP | Process |
GO:0022625 | cytosolic large ribosomal subunit | 21873635. | IBA | Component |
GO:0022625 | cytosolic large ribosomal subunit | 12490704. | NAS | Component |