Cancer | Chr | Position | Mutation Type | dbSNP | Protein-change | Allele Freq | RBD |
---|---|---|---|---|---|---|---|
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
CESC | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
DLBC | |||||||
ESCA | |||||||
ESCA | |||||||
GBM | |||||||
HNSC | |||||||
HNSC | |||||||
KICH | |||||||
KIRC | |||||||
KIRC | |||||||
KIRC | |||||||
KIRC | |||||||
KIRC | |||||||
KIRC | |||||||
KIRP | |||||||
KIRP | |||||||
KIRP | |||||||
LGG | |||||||
LIHC | |||||||
LIHC | |||||||
LUAD | |||||||
LUAD | |||||||
LUAD | |||||||
LUAD | |||||||
LUAD | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
OV | |||||||
OV | |||||||
PAAD | |||||||
PAAD | |||||||
PRAD | |||||||
PRAD | |||||||
PRAD | |||||||
PRAD | |||||||
PRAD | |||||||
READ | |||||||
READ | |||||||
SARC | |||||||
SARC | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCS |
Cancer | Type | Freq | Q-value |
---|---|---|---|
ACC | |||
BLCA | |||
DLBC | |||
ESCA | |||
KIRC | |||
MESO | |||
PAAD | |||
PCPG | |||
THCA |
Cancer | P-value | Q-value |
---|---|---|
THYM | ||
KIRC | ||
STAD | ||
MESO | ||
ACC | ||
UCS | ||
SKCM | ||
TGCT | ||
KIRP | ||
PAAD | ||
BLCA | ||
CESC | ||
LAML | ||
LIHC | ||
DLBC | ||
LUAD | ||
UVM |
PID | Title | Article | Time | Author | Doi |
---|---|---|---|---|---|
14703492 |
Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENST00000446922 | HMGB2-203 | 1175 | - | ENSP00000393448 | 209 (aa) | - | P26583 |
ENST00000511316 | HMGB2-205 | 1841 | - | - | - (aa) | - | - |
ENST00000506267 | HMGB2-204 | 629 | - | ENSP00000423001 | 134 (aa) | - | D6R9A6 |
ENST00000296503 | HMGB2-201 | 1889 | - | ENSP00000296503 | 209 (aa) | - | P26583 |
ENST00000438704 | HMGB2-202 | 1032 | - | ENSP00000404912 | 209 (aa) | - | P26583 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSG00000164104 | HMGB2 | 100 | 97.761 | ENSMUSG00000054717 | Hmgb2 | 100 | 98.990 | Mus_musculus |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0000400 | four-way junction DNA binding | - | ISS | Function |
GO:0000790 | nuclear chromatin | 21873635. | IBA | Component |
GO:0000790 | nuclear chromatin | - | ISS | Component |
GO:0000793 | condensed chromosome | 12925773. | IDA | Component |
GO:0001158 | enhancer sequence-specific DNA binding | - | ISS | Function |
GO:0001938 | positive regulation of endothelial cell proliferation | 19811285. | IDA | Process |
GO:0002437 | inflammatory response to antigenic stimulus | - | ISS | Process |
GO:0003677 | DNA binding | 11909973. | IMP | Function |
GO:0003684 | damaged DNA binding | 8226934. | IDA | Function |
GO:0003690 | double-stranded DNA binding | - | ISS | Function |
GO:0003697 | single-stranded DNA binding | - | ISS | Function |
GO:0003713 | transcription coactivator activity | 19223331. | IDA | Function |
GO:0003723 | RNA binding | 22658674.22681889. | HDA | Function |
GO:0005515 | protein binding | 9636147.11909973.25416956. | IPI | Function |
GO:0005615 | extracellular space | 19811285. | IDA | Component |
GO:0005623 | cell | 15496585. | IDA | Component |
GO:0005634 | nucleus | 8339930.11909973. | IDA | Component |
GO:0005654 | nucleoplasm | - | TAS | Component |
GO:0005730 | nucleolus | - | IDA | Component |
GO:0005737 | cytoplasm | 21873635. | IBA | Component |
GO:0005737 | cytoplasm | 11909973. | IDA | Component |
GO:0006265 | DNA topological change | - | ISS | Process |
GO:0006309 | apoptotic DNA fragmentation | - | TAS | Process |
GO:0006310 | DNA recombination | 21873635. | IBA | Process |
GO:0006325 | chromatin organization | 11909973. | NAS | Process |
GO:0006334 | nucleosome assembly | 11909973. | NAS | Process |
GO:0006338 | chromatin remodeling | 21873635. | IBA | Process |
GO:0006357 | regulation of transcription by RNA polymerase II | 21873635. | IBA | Process |
GO:0006357 | regulation of transcription by RNA polymerase II | 7797075. | IDA | Process |
GO:0007289 | spermatid nucleus differentiation | - | IEA | Process |
GO:0008134 | transcription factor binding | 21873635. | IBA | Function |
GO:0008134 | transcription factor binding | - | ISS | Function |
GO:0008144 | drug binding | - | ISS | Function |
GO:0008301 | DNA binding, bending | 21873635. | IBA | Function |
GO:0008301 | DNA binding, bending | 8339930.11909973. | IDA | Function |
GO:0008584 | male gonad development | - | IEA | Process |
GO:0019904 | protein domain specific binding | - | IEA | Function |
GO:0032075 | positive regulation of nuclease activity | 978439. | IDA | Process |
GO:0032392 | DNA geometric change | - | ISS | Process |
GO:0032496 | response to lipopolysaccharide | - | ISS | Process |
GO:0032728 | positive regulation of interferon-beta production | - | IEA | Process |
GO:0032991 | protein-containing complex | 11909973. | IDA | Component |
GO:0033151 | V(D)J recombination | - | ISS | Process |
GO:0042056 | chemoattractant activity | 19811285. | IDA | Function |
GO:0042493 | response to drug | - | ISS | Process |
GO:0043388 | positive regulation of DNA binding | 19965638. | IDA | Process |
GO:0044212 | transcription regulatory region DNA binding | 19965638. | IDA | Function |
GO:0044378 | non-sequence-specific DNA binding, bending | - | ISS | Function |
GO:0045087 | innate immune response | - | IEA | Process |
GO:0045089 | positive regulation of innate immune response | 21873635. | IBA | Process |
GO:0045648 | positive regulation of erythrocyte differentiation | 19965638. | IMP | Process |
GO:0045654 | positive regulation of megakaryocyte differentiation | 19965638. | IMP | Process |
GO:0045892 | negative regulation of transcription, DNA-templated | 9636147. | IDA | Process |
GO:0045893 | positive regulation of transcription, DNA-templated | 19965638. | IDA | Process |
GO:0045944 | positive regulation of transcription by RNA polymerase II | 21873635. | IBA | Process |
GO:0045944 | positive regulation of transcription by RNA polymerase II | 19223331.19965638. | IDA | Process |
GO:0048471 | perinuclear region of cytoplasm | 9010268.11909973. | IDA | Component |
GO:0048545 | response to steroid hormone | - | IEA | Process |
GO:0050767 | regulation of neurogenesis | - | ISS | Process |
GO:0050786 | RAGE receptor binding | 19811285. | IGI | Function |
GO:0050829 | defense response to Gram-negative bacterium | 23877675. | IDA | Process |
GO:0050830 | defense response to Gram-positive bacterium | 23877675. | IDA | Process |
GO:0050918 | positive chemotaxis | - | IEA | Process |
GO:0051103 | DNA ligation involved in DNA repair | - | ISS | Process |
GO:0060326 | cell chemotaxis | 19811285. | IDA | Process |
GO:0071222 | cellular response to lipopolysaccharide | 19811285. | IEP | Process |
GO:0072091 | regulation of stem cell proliferation | - | ISS | Process |
GO:0097100 | supercoiled DNA binding | - | ISS | Function |
GO:1902042 | negative regulation of extrinsic apoptotic signaling pathway via death domain receptors | - | IEA | Process |