EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1821623838Missense_MutationnovelR61P0.31
BLCAchr18216123995'UTRnovel0.42
BRCAchr18216292863'UTRnovel0.29
CESCchr1821623899SilentnovelV81V0.3
CESCchr18216123465'UTRnovel0.24
CESCchr18216123475'UTRnovel0.24
CESCchr1821612438Silentrs139445414L3L0.25
GBMchr1821623852Missense_Mutationrs572142783R66W0.39
HNSCchr18216291893'UTRnovel0.2
KIRCchr18216292043'UTRnovel0.05
KIRPchr18216123605'UTRnovel0.29
LUADchr18216124035'UTRrs115487680.16
LUADchr1821629100Missense_MutationNAR108C0.19
LUADchr18216123235'UTRnovel0.18
LUADchr1821623816Nonsense_MutationnovelQ54*0.17
LUSCchr18216123875'UTRnovel0.06
LUSCchr1821623882Missense_MutationNAL76V0.26
OVchr1821622742Missense_MutationnovelS11T0.08LSM
SKCMchr1821623852Missense_Mutationrs572142783R66W0.22
SKCMchr18216291403'UTRnovel0.31
SKCMchr1821629066In_Frame_DelNAR112_G115del0.13
STADchr1821623827Silentrs771463023T57T0.36
STADchr1821623893Silentrs141663553L79L0.09
STADchr1821629106Missense_MutationNAR110C0.22
STADchr1821623827Silentrs771463023T57T0.17
STADchr18216124285'UTRNA0.06
UCECchr18216292343'UTRnovel0.32
UCECchr1821623838Missense_MutationNAR61Q0.27
UCECchr18216292863'UTRnovel0.32
UCECchr18216292063'UTRnovel0.23
UCECchr18216293393'UTRnovel0.18
UCECchr18216293403'UTRnovel0.18
UCECchr1821623810Missense_MutationnovelP52S0.39
UCECchr1821622758SilentnovelT16T0.13
UCECchr18216123665'UTRnovel0.21
UCECchr1821623852Missense_Mutationrs572142783R66W0.35
UCECchr1821622749Missense_MutationnovelE13D0.17LSM
UCECchr1821623811Missense_MutationnovelP52H0.33
UCECchr1821623840Missense_MutationnovelG62R0.19

Copy Number Variations (CNVs)
CancerTypeFreq Q-value

Survival Analysis
CancerP-value Q-value
THYM0.022

Kaplan-Meier Survival Analysis

SARC0.00013

Kaplan-Meier Survival Analysis

MESO0.0011

Kaplan-Meier Survival Analysis

ACC0.0001

Kaplan-Meier Survival Analysis

LUSC0.044

Kaplan-Meier Survival Analysis

PAAD0.039

Kaplan-Meier Survival Analysis

LIHC0.0001

Kaplan-Meier Survival Analysis

DLBC0.0062

Kaplan-Meier Survival Analysis

LGG0.025

Kaplan-Meier Survival Analysis

LUAD0.0069

Kaplan-Meier Survival Analysis

UVM0.018

Kaplan-Meier Survival Analysis

OV0.0001

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000167088 (Gene tree)
Gene ID
6632
Gene Symbol
SNRPD1
Alias
HsT2456|Sm-D1|SNRPD
Full Name
small nuclear ribonucleoprotein D1 polypeptide
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
21,258 bases
Position
chr18:21,612,267-21,633,524
Accession
11158
RBP type
canonical RBP
Summary
This gene encodes a small nuclear ribonucleoprotein that belongs to the SNRNP core protein family. The protein may act as a charged protein scaffold to promote SNRNP assembly or strengthen SNRNP-SNRNP interactions through nonspecific electrostatic contacts with RNA. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2014]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000300413LSMPF01423.222.4e-1811
ENSP00000463676LSMPF01423.220.0001511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
27974620Will the circle be unbroken: specific mutations in the yeast Sm protein ring expose a requirement for assembly factor Brr1, a homolog of Gemin2.RNA2017 MarSchwer Bdoi: 10.1261/rna.059881.116
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000579618SNRPD1-203320-ENSP0000046367644 (aa)-J3QLR7
ENST00000300413SNRPD1-2014909-ENSP00000300413119 (aa)-P62314
ENST00000582475SNRPD1-204723-ENSP0000046356875 (aa)-J3QLI9
ENST00000577906SNRPD1-202745--- (aa)--
Gene Model
Click here to download ENSG00000167088's gene model file
Pathways
Pathway IDPathway NameSource
hsa03040SpliceosomeKEGG
hsa05322Systemic lupus erythematosusKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000167088's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000167088SNRPD18430.769ENSG00000100028SNRPD35930.986
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000167088SNRPD110096.639ENSAPOG00000019446snrpd16596.639Acanthochromis_polyacanthus
ENSG00000167088SNRPD1100100.000ENSAMEG00000002576SNRPD110098.291Ailuropoda_melanoleuca
ENSG00000167088SNRPD19496.429ENSACIG00000011263snrpd110096.429Amphilophus_citrinellus
ENSG00000167088SNRPD110096.639ENSAOCG00000007406snrpd110096.639Amphiprion_ocellaris
ENSG00000167088SNRPD110092.437ENSAPEG00000014961snrpd110092.437Amphiprion_percula
ENSG00000167088SNRPD19496.429ENSAPEG00000012539SNRPD110096.429Amphiprion_percula
ENSG00000167088SNRPD110096.639ENSATEG00000014399snrpd110096.639Anabas_testudineus
ENSG00000167088SNRPD1100100.000ENSAPLG00000012256SNRPD197100.000Anas_platyrhynchos
ENSG00000167088SNRPD1100100.000ENSACAG00000006364SNRPD1100100.000Anolis_carolinensis
ENSG00000167088SNRPD1100100.000ENSANAG00000025641SNRPD1100100.000Aotus_nancymaae
ENSG00000167088SNRPD19496.429ENSACLG00000017406snrpd110096.429Astatotilapia_calliptera
ENSG00000167088SNRPD110097.479ENSAMXG00000004589snrpd110097.479Astyanax_mexicanus
ENSG00000167088SNRPD1100100.000ENSBTAG00000008292SNRPD1100100.000Bos_taurus
ENSG00000167088SNRPD17994.681ENSBTAG00000055316-8194.681Bos_taurus
ENSG00000167088SNRPD110098.667ENSBTAG00000047266-9496.429Bos_taurus
ENSG00000167088SNRPD19796.522ENSBTAG00000012376-8696.522Bos_taurus
ENSG00000167088SNRPD16693.103WBGene00004916snr-37676.042Caenorhabditis_elegans
ENSG00000167088SNRPD1100100.000ENSCJAG00000042955SNRPD1100100.000Callithrix_jacchus
ENSG00000167088SNRPD1100100.000ENSCAFG00000018247SNRPD1100100.000Canis_familiaris
ENSG00000167088SNRPD180100.000ENSCAFG00020015914SNRPD174100.000Canis_lupus_dingo
ENSG00000167088SNRPD1100100.000ENSCHIG00000005557SNRPD110097.479Capra_hircus
ENSG00000167088SNRPD1100100.000ENSTSYG00000030028SNRPD1100100.000Carlito_syrichta
ENSG00000167088SNRPD1100100.000ENSCAPG00000008103SNRPD19999.130Cavia_aperea
ENSG00000167088SNRPD1100100.000ENSCPOG00000004679SNRPD1100100.000Cavia_porcellus
ENSG00000167088SNRPD110097.333ENSCCAG00000016652-10096.639Cebus_capucinus
ENSG00000167088SNRPD110097.333ENSCCAG00000005390-8195.833Cebus_capucinus
ENSG00000167088SNRPD1100100.000ENSCCAG00000020611-10099.160Cebus_capucinus
ENSG00000167088SNRPD1100100.000ENSCCAG00000032658SNRPD1100100.000Cebus_capucinus
ENSG00000167088SNRPD1100100.000ENSCATG00000039978SNRPD1100100.000Cercocebus_atys
ENSG00000167088SNRPD1100100.000ENSCLAG00000008691SNRPD1100100.000Chinchilla_lanigera
ENSG00000167088SNRPD1100100.000ENSCSAG00000017654SNRPD1100100.000Chlorocebus_sabaeus
ENSG00000167088SNRPD1100100.000ENSCPBG00000023143SNRPD1100100.000Chrysemys_picta_bellii
ENSG00000167088SNRPD16896.667ENSCING00000024100-6987.209Ciona_intestinalis
ENSG00000167088SNRPD16896.667ENSCSAVG00000004578-7085.057Ciona_savignyi
ENSG00000167088SNRPD1100100.000ENSCGRG00001021055-100100.000Cricetulus_griseus_chok1gshd
ENSG00000167088SNRPD18175.000ENSCGRG00001009945-8575.000Cricetulus_griseus_chok1gshd
ENSG00000167088SNRPD1100100.000ENSCGRG00000000490-100100.000Cricetulus_griseus_crigri
ENSG00000167088SNRPD18175.000ENSCGRG00000006224-8575.000Cricetulus_griseus_crigri
ENSG00000167088SNRPD18094.737ENSCSEG00000018141snrpd18194.792Cynoglossus_semilaevis
ENSG00000167088SNRPD110096.639ENSCVAG00000000534snrpd110096.639Cyprinodon_variegatus
ENSG00000167088SNRPD110097.479ENSDARG00000011648snrpd110097.479Danio_rerio
ENSG00000167088SNRPD1100100.000ENSDNOG00000040310SNRPD1100100.000Dasypus_novemcinctus
ENSG00000167088SNRPD1100100.000ENSDORG00000008349Snrpd1100100.000Dipodomys_ordii
ENSG00000167088SNRPD16896.667FBgn0261933SmD17682.979Drosophila_melanogaster
ENSG00000167088SNRPD1100100.000ENSETEG00000011689SNRPD174100.000Echinops_telfairi
ENSG00000167088SNRPD19492.857ENSEBUG00000003170snrpd19492.857Eptatretus_burgeri
ENSG00000167088SNRPD1100100.000ENSEASG00005002433SNRPD1100100.000Equus_asinus_asinus
ENSG00000167088SNRPD1100100.000ENSECAG00000014373SNRPD1100100.000Equus_caballus
ENSG00000167088SNRPD175100.000ENSEEUG00000004987SNRPD1100100.000Erinaceus_europaeus
ENSG00000167088SNRPD19385.586ENSELUG00000000088snrpd17995.745Esox_lucius
ENSG00000167088SNRPD1100100.000ENSFCAG00000012352SNRPD1100100.000Felis_catus
ENSG00000167088SNRPD1100100.000ENSFALG00000002646SNRPD1100100.000Ficedula_albicollis
ENSG00000167088SNRPD110097.479ENSGMOG00000015607snrpd110097.479Gadus_morhua
ENSG00000167088SNRPD1100100.000ENSGALG00000041334SNRPD1100100.000Gallus_gallus
ENSG00000167088SNRPD110096.639ENSGAFG00000011171snrpd110096.639Gambusia_affinis
ENSG00000167088SNRPD110097.479ENSGACG00000005201SNRPD110097.479Gasterosteus_aculeatus
ENSG00000167088SNRPD1100100.000ENSGAGG00000011197SNRPD1100100.000Gopherus_agassizii
ENSG00000167088SNRPD18194.792ENSGGOG00000026706-8094.792Gorilla_gorilla
ENSG00000167088SNRPD1100100.000ENSGGOG00000041053SNRPD1100100.000Gorilla_gorilla
ENSG00000167088SNRPD110096.639ENSHBUG00000003236snrpd110096.639Haplochromis_burtoni
ENSG00000167088SNRPD1100100.000ENSHGLG00000007152SNRPD1100100.000Heterocephalus_glaber_female
ENSG00000167088SNRPD1100100.000ENSHGLG00100008618SNRPD1100100.000Heterocephalus_glaber_male
ENSG00000167088SNRPD110096.639ENSIPUG00000003576snrpd110096.639Ictalurus_punctatus
ENSG00000167088SNRPD1100100.000ENSSTOG00000000485SNRPD1100100.000Ictidomys_tridecemlineatus
ENSG00000167088SNRPD1100100.000ENSJJAG00000017698Snrpd1100100.000Jaculus_jaculus
ENSG00000167088SNRPD110096.639ENSKMAG00000005987snrpd110096.639Kryptolebias_marmoratus
ENSG00000167088SNRPD110096.639ENSLBEG00000003327snrpd110096.639Labrus_bergylta
ENSG00000167088SNRPD1100100.000ENSLACG00000001955SNRPD1100100.000Latimeria_chalumnae
ENSG00000167088SNRPD110098.667ENSLOCG00000002003snrpd110097.436Lepisosteus_oculatus
ENSG00000167088SNRPD1100100.000ENSLAFG00000005819SNRPD110098.305Loxodonta_africana
ENSG00000167088SNRPD1100100.000ENSMFAG00000042080SNRPD1100100.000Macaca_fascicularis
ENSG00000167088SNRPD1100100.000ENSMMUG00000003992SNRPD197100.000Macaca_mulatta
ENSG00000167088SNRPD1100100.000ENSMNEG00000041296SNRPD1100100.000Macaca_nemestrina
ENSG00000167088SNRPD1100100.000ENSMLEG00000028659SNRPD1100100.000Mandrillus_leucophaeus
ENSG00000167088SNRPD110096.639ENSMAMG00000012971snrpd110096.639Mastacembelus_armatus
ENSG00000167088SNRPD110096.639ENSMZEG00005004685snrpd110096.639Maylandia_zebra
ENSG00000167088SNRPD1100100.000ENSMGAG00000011598SNRPD195100.000Meleagris_gallopavo
ENSG00000167088SNRPD18294.845ENSMAUG00000006829-6294.845Mesocricetus_auratus
ENSG00000167088SNRPD18183.333ENSMAUG00000016502-8683.333Mesocricetus_auratus
ENSG00000167088SNRPD18183.333ENSMAUG00000016467-8683.333Mesocricetus_auratus
ENSG00000167088SNRPD1100100.000ENSMICG00000044066SNRPD1100100.000Microcebus_murinus
ENSG00000167088SNRPD1100100.000ENSMOCG00000017367Snrpd1100100.000Microtus_ochrogaster
ENSG00000167088SNRPD110096.639ENSMMOG00000019089snrpd110096.639Mola_mola
ENSG00000167088SNRPD1100100.000ENSMODG00000021487SNRPD1100100.000Monodelphis_domestica
ENSG00000167088SNRPD110096.639ENSMALG00000014459snrpd110096.639Monopterus_albus
ENSG00000167088SNRPD1100100.000MGP_CAROLIEiJ_G0021994Snrpd1100100.000Mus_caroli
ENSG00000167088SNRPD1100100.000ENSMUSG00000002477Snrpd1100100.000Mus_musculus
ENSG00000167088SNRPD1100100.000MGP_PahariEiJ_G0018731Snrpd1100100.000Mus_pahari
ENSG00000167088SNRPD1100100.000MGP_SPRETEiJ_G0022910Snrpd1100100.000Mus_spretus
ENSG00000167088SNRPD1100100.000ENSMPUG00000005567-10098.291Mustela_putorius_furo
ENSG00000167088SNRPD110099.160ENSMPUG00000020041-10099.160Mustela_putorius_furo
ENSG00000167088SNRPD19997.297ENSMLUG00000009124SNRPD19097.414Myotis_lucifugus
ENSG00000167088SNRPD1100100.000ENSNGAG00000023946Snrpd1100100.000Nannospalax_galili
ENSG00000167088SNRPD17995.745ENSNBRG00000012119snrpd17895.745Neolamprologus_brichardi
ENSG00000167088SNRPD1100100.000ENSNLEG00000031430SNRPD110097.479Nomascus_leucogenys
ENSG00000167088SNRPD1100100.000ENSODEG00000005764SNRPD1100100.000Octodon_degus
ENSG00000167088SNRPD110096.639ENSONIG00000002486snrpd110096.639Oreochromis_niloticus
ENSG00000167088SNRPD18288.776ENSOANG00000004638-8288.776Ornithorhynchus_anatinus
ENSG00000167088SNRPD110099.160ENSOCUG00000014399-10099.160Oryctolagus_cuniculus
ENSG00000167088SNRPD1100100.000ENSOCUG00000023761-10098.291Oryctolagus_cuniculus
ENSG00000167088SNRPD19496.429ENSORLG00000012516snrpd110096.429Oryzias_latipes
ENSG00000167088SNRPD110096.639ENSORLG00020005743snrpd110096.639Oryzias_latipes_hni
ENSG00000167088SNRPD110096.639ENSORLG00015013402snrpd110096.639Oryzias_latipes_hsok
ENSG00000167088SNRPD110096.639ENSOMEG00000011571snrpd110096.639Oryzias_melastigma
ENSG00000167088SNRPD1100100.000ENSOGAG00000007833SNRPD110096.639Otolemur_garnettii
ENSG00000167088SNRPD110094.958ENSOARG00000003413-8594.958Ovis_aries
ENSG00000167088SNRPD1100100.000ENSPPAG00000042593SNRPD1100100.000Pan_paniscus
ENSG00000167088SNRPD110079.221ENSPPRG00000005009-9272.321Panthera_pardus
ENSG00000167088SNRPD1100100.000ENSPPRG00000002399SNRPD1100100.000Panthera_pardus
ENSG00000167088SNRPD1100100.000ENSPTIG00000013206SNRPD1100100.000Panthera_tigris_altaica
ENSG00000167088SNRPD1100100.000ENSPTRG00000009909SNRPD1100100.000Pan_troglodytes
ENSG00000167088SNRPD18694.118ENSPTRG00000050159-8794.118Pan_troglodytes
ENSG00000167088SNRPD1100100.000ENSPANG00000023478SNRPD1100100.000Papio_anubis
ENSG00000167088SNRPD19192.647ENSPKIG00000021610snrpd19495.238Paramormyrops_kingsleyae
ENSG00000167088SNRPD110097.479ENSPKIG00000003985SNRPD110097.479Paramormyrops_kingsleyae
ENSG00000167088SNRPD110096.639ENSPMGG00000001862snrpd110096.639Periophthalmus_magnuspinnatus
ENSG00000167088SNRPD1100100.000ENSPEMG00000014773-100100.000Peromyscus_maniculatus_bairdii
ENSG00000167088SNRPD18682.692ENSPMAG00000003938-8582.692Petromyzon_marinus
ENSG00000167088SNRPD1100100.000ENSPCIG00000020320SNRPD1100100.000Phascolarctos_cinereus
ENSG00000167088SNRPD18195.833ENSPFOG00000012448SNRPD18595.833Poecilia_formosa
ENSG00000167088SNRPD18195.833ENSPLAG00000006738snrpd18595.833Poecilia_latipinna
ENSG00000167088SNRPD18195.833ENSPMEG00000021942snrpd18595.833Poecilia_mexicana
ENSG00000167088SNRPD110096.639ENSPREG00000007094snrpd110096.639Poecilia_reticulata
ENSG00000167088SNRPD1100100.000ENSPPYG00000025874SNRPD1100100.000Pongo_abelii
ENSG00000167088SNRPD1100100.000ENSPCOG00000013327SNRPD1100100.000Propithecus_coquereli
ENSG00000167088SNRPD1100100.000ENSPVAG00000005511SNRPD180100.000Pteropus_vampyrus
ENSG00000167088SNRPD110096.639ENSPNAG00000017824snrpd110096.639Pygocentrus_nattereri
ENSG00000167088SNRPD1100100.000ENSRNOG00000013714Snrpd1100100.000Rattus_norvegicus
ENSG00000167088SNRPD1100100.000ENSRBIG00000022996SNRPD1100100.000Rhinopithecus_bieti
ENSG00000167088SNRPD1100100.000ENSRROG00000027640SNRPD1100100.000Rhinopithecus_roxellana
ENSG00000167088SNRPD1100100.000ENSSBOG00000020998SNRPD1100100.000Saimiri_boliviensis_boliviensis
ENSG00000167088SNRPD1100100.000ENSSHAG00000011791SNRPD1100100.000Sarcophilus_harrisii
ENSG00000167088SNRPD19495.536ENSSFOG00015008809-9495.536Scleropages_formosus
ENSG00000167088SNRPD19495.536ENSSFOG00015022253-9495.536Scleropages_formosus
ENSG00000167088SNRPD19495.536ENSSMAG00000008765snrpd19495.536Scophthalmus_maximus
ENSG00000167088SNRPD19195.370ENSSDUG00000010521snrpd19295.370Seriola_dumerili
ENSG00000167088SNRPD110096.639ENSSLDG00000011858snrpd110096.639Seriola_lalandi_dorsalis
ENSG00000167088SNRPD157100.000ENSSARG00000004271SNRPD1100100.000Sorex_araneus
ENSG00000167088SNRPD1100100.000ENSSPUG00000002824SNRPD1100100.000Sphenodon_punctatus
ENSG00000167088SNRPD19496.429ENSSPAG00000015229snrpd110096.429Stegastes_partitus
ENSG00000167088SNRPD1100100.000ENSSSCG00000003701SNRPD1100100.000Sus_scrofa
ENSG00000167088SNRPD1100100.000ENSTGUG00000005095SNRPD197100.000Taeniopygia_guttata
ENSG00000167088SNRPD19496.429ENSTRUG00000008977snrpd110096.429Takifugu_rubripes
ENSG00000167088SNRPD19194.118ENSTNIG00000001224snrpd19291.667Tetraodon_nigroviridis
ENSG00000167088SNRPD1100100.000ENSTBEG00000013776SNRPD1100100.000Tupaia_belangeri
ENSG00000167088SNRPD1100100.000ENSTTRG00000002654SNRPD1100100.000Tursiops_truncatus
ENSG00000167088SNRPD1100100.000ENSUAMG00000013431SNRPD197100.000Ursus_americanus
ENSG00000167088SNRPD1100100.000ENSUMAG00000019740SNRPD1100100.000Ursus_maritimus
ENSG00000167088SNRPD1100100.000ENSVPAG00000010056SNRPD180100.000Vicugna_pacos
ENSG00000167088SNRPD1100100.000ENSVVUG00000004009SNRPD1100100.000Vulpes_vulpes
ENSG00000167088SNRPD110098.667ENSXETG00000027354snrpd110098.319Xenopus_tropicalis
ENSG00000167088SNRPD110096.639ENSXCOG00000020108snrpd110096.639Xiphophorus_couchianus
ENSG00000167088SNRPD110096.639ENSXMAG00000003368snrpd110096.639Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000243commitment complex21873635.IBAComponent
GO:0000245spliceosomal complex assembly7527560.TASProcess
GO:0000387spliceosomal snRNP assembly21873635.IBAProcess
GO:0000387spliceosomal snRNP assembly18984161.IDAProcess
GO:0000387spliceosomal snRNP assembly-TASProcess
GO:0000398mRNA splicing, via spliceosome11991638.ICProcess
GO:0000398mRNA splicing, via spliceosome28076346.IDAProcess
GO:0000398mRNA splicing, via spliceosome-TASProcess
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0005515protein binding9417867.11714716.14524621.15939020.18984161.22365833.25416956.30021884.IPIFunction
GO:0005634nucleus21630459.HDAComponent
GO:0005634nucleus14524621.28076346.IDAComponent
GO:0005634nucleus14524621.IMPComponent
GO:0005654nucleoplasm-TASComponent
GO:0005682U5 snRNP21873635.IBAComponent
GO:0005685U1 snRNP21873635.IBAComponent
GO:0005685U1 snRNP21113136.25555158.IDAComponent
GO:0005686U2 snRNP21873635.IBAComponent
GO:0005687U4 snRNP21873635.IBAComponent
GO:0005687U4 snRNP21516107.IDAComponent
GO:0005689U12-type spliceosomal complex21873635.IBAComponent
GO:0005689U12-type spliceosomal complex15146077.IDAComponent
GO:0005829cytosol18984161.IDAComponent
GO:0005829cytosol-TASComponent
GO:0008380RNA splicing1701240.TASProcess
GO:0030532small nuclear ribonucleoprotein complex7527560.TASComponent
GO:0034709methylosome18984161.IDAComponent
GO:0034715pICln-Sm protein complex21873635.IBAComponent
GO:0034715pICln-Sm protein complex18984161.IDAComponent
GO:0034719SMN-Sm protein complex21873635.IBAComponent
GO:0034719SMN-Sm protein complex18984161.IDAComponent
GO:0046540U4/U6 x U5 tri-snRNP complex26912367.IDAComponent
GO:0051170import into nucleus-TASProcess
GO:0071005U2-type precatalytic spliceosome28781166.IDAComponent
GO:0071007U2-type catalytic step 2 spliceosome28076346.IDAComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome11991638.IDAComponent
GO:1990446U1 snRNP binding-IEAFunction
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