EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq	RBD
BLCA	chr16	89563085	3'UTR	novel		0.4
BLCA	chr16	89562979	Silent	rs16966725	L191L	0.88
BLCA	chr16	89563033	Missense_Mutation	NA	K209N	0.37
BLCA	chr16	89561467	Intron	rs777910066		0.42
BRCA	chr16	89562346	Silent	novel	L144L	0.17
CESC	chr16	89561750	Missense_Mutation	novel	S140F	0.23	Ribosomal_L13e
CESC	chr16	89563104	3'UTR	novel		0.15
CESC	chr16	89562392	Splice_Site	novel	X159_splice	0.26
COAD	chr16	89561482	Intron	novel		0.29
COAD	chr16	89561629	Missense_Mutation	NA	P100T	0.24	Ribosomal_L13e
DLBC	chr16	89561633	Missense_Mutation	novel	R101K	0.2	Ribosomal_L13e
DLBC	chr16	89562963	Missense_Mutation	rs139252401	R186H	0.31
ESCA	chr16	89562999	Frame_Shift_Del	novel	*R198Kfs60**	0.31
HNSC	chr16	89560974	Silent	novel	R5R	0.61
KIRP	chr16	89561017	Missense_Mutation	NA	R20W	0.49
LIHC	chr16	89561662	Nonsense_Mutation	novel	Q111*	0.28	Ribosomal_L13e
LUAD	chr16	89561670	Silent	novel	N113N	0.32
LUSC	chr16	89562383	Missense_Mutation	rs781576247	V157I	0.21
LUSC	chr16	89562380	Missense_Mutation	novel	P156S	0.08
LUSC	chr16	89562341	Missense_Mutation	rs140485395	E143K	0.67
SKCM	chr16	89561487	Intron	rs780736973		0.32
SKCM	chr16	89561492	Intron	novel		0.41
SKCM	chr16	89561657	Missense_Mutation	NA	S109F	0.45	Ribosomal_L13e
STAD	chr16	89563043	3'UTR	novel		0.18
UCEC	chr16	89562992	Missense_Mutation	novel	A196T	0.1
UCEC	chr16	89563073	3'UTR	novel		0.19
UCEC	chr16	89562989	Missense_Mutation	rs772105032	R195W	0.43
UCEC	chr16	89561454	Intron	novel		0.19
UCEC	chr16	89563113	3'UTR	rs190936471		0.29
UCEC	chr16	89562982	Silent	rs144229587	F192F	0.1
UCEC	chr16	89562943	Silent	rs372911433	F179F	0.3
UCEC	chr16	89563121	3'UTR	novel		0.38
UCEC	chr16	89563092	3'UTR	rs142800937		0.14
UCEC	chr16	89561621	Missense_Mutation	NA	S97Y	0.34	Ribosomal_L13e
UCEC	chr16	89563161	3'UTR	novel		0.57

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
ACC	DEL	0.0889	0.061428
BRCA	DEL	0.588	7.2395e-08
CHOL	DEL	0.1944	0.23475
GBM	DEL	0.1144	0.023089
KIRP	DEL	0.0382	0.0042101
LAML	DEL	0.0262	0.0010312
LUAD	DEL	0.2655	1.4158e-09
MESO	DEL	0.2529	0.001069
SKCM	DEL	0.3134	0.0077444
TGCT	DEL	0.3867	0.00015997
THCA	DEL	0.01	0.026572
UVM	DEL	0.1875	0.12091

Survival Analysis

Cancer	P-value	Q-value
THYM	0.035	Kaplan-Meier Survival Analysis
KIRC	0.0001	Kaplan-Meier Survival Analysis
MESO	0.013	Kaplan-Meier Survival Analysis
ACC	0.0023	Kaplan-Meier Survival Analysis
HNSC	0.038	Kaplan-Meier Survival Analysis
BRCA	0.0067	Kaplan-Meier Survival Analysis
ESCA	0.032	Kaplan-Meier Survival Analysis
PCPG	0.035	Kaplan-Meier Survival Analysis
READ	0.032	Kaplan-Meier Survival Analysis
KICH	0.0064	Kaplan-Meier Survival Analysis
UCEC	0.00031	Kaplan-Meier Survival Analysis
GBM	0.025	Kaplan-Meier Survival Analysis
LGG	0.00013	Kaplan-Meier Survival Analysis
UVM	0.011	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000167526 (Gene tree)
Gene ID: 6137
Gene Symbol: RPL13
Alias: D16S444E|BBC1|L13
Full Name: ribosomal protein L13
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 6,173 bases
Position: chr16:89,560,657-89,566,829
Accession: 10303
RBP type: canonical RBP
Summary: Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L13E family of ribosomal proteins. It is located in the cytoplasm. This gene is expressed at significantly higher levels in benign breast lesions than in breast carcinomas. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2011]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000307889	Ribosomal_L13e	PF01294.18	1.4e-81	1	1
ENSP00000376811	Ribosomal_L13e	PF01294.18	1.4e-81	1	1
ENSP00000455009	Ribosomal_L13e	PF01294.18	1.4e-81	1	1
ENSP00000464612	Ribosomal_L13e	PF01294.18	1.1e-61	1	1
ENSP00000438959	Ribosomal_L13e	PF01294.18	8.2e-48	1	2
ENSP00000438959	Ribosomal_L13e	PF01294.18	8.2e-48	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	NascentRICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
8219074	A rice (Oryza sativa L.) cDNA encodes a protein sequence homologous to the eukaryotic ribosomal 5S RNA-binding protein.	Plant Mol Biol	1993 Oct	Kim JK	-
15465910	Effects of the U1C L13 mutation and temperature regulation of yeast commitment complex formation.	Proc Natl Acad Sci U S A	2004 Oct 12	Du H	-

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000563270	RPL13-211	554	-	ENSP00000457686	54 (aa)	-	H3BUK8
ENST00000399461	RPL13-203	879	-	-	- (aa)	-	-
ENST00000393099	RPL13-202	2385	-	ENSP00000376811	211 (aa)	-	P26373
ENST00000487034	RPL13-208	615	-	-	- (aa)	-	-
ENST00000562879	RPL13-210	958	-	ENSP00000457174	63 (aa)	-	H3BTH3
ENST00000567815	RPL13-214	712	-	ENSP00000455009	211 (aa)	-	P26373
ENST00000311528	RPL13-201	4498	-	ENSP00000307889	211 (aa)	-	P26373
ENST00000563749	RPL13-212	2367	-	-	- (aa)	-	-
ENST00000570149	RPL13-215	435	-	-	- (aa)	-	-
ENST00000491523	RPL13-209	698	-	-	- (aa)	-	-
ENST00000452368	RPL13-204	1455	-	ENSP00000438959	164 (aa)	-	P26373
ENST00000467736	RPL13-205	528	-	ENSP00000464612	126 (aa)	-	J3QSB4
ENST00000484610	RPL13-207	924	-	-	- (aa)	-	-
ENST00000565571	RPL13-213	568	-	-	- (aa)	-	-
ENST00000472354	RPL13-206	631	-	ENSP00000462380	78 (aa)	-	J3KS98

Gene Model

Click here to download ENSG00000167526's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000167526's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000167526	RPL13	100	89.683	ENSAPOG00000010933	rpl13	100	88.626	Acanthochromis_polyacanthus
ENSG00000167526	RPL13	100	98.148	ENSAMEG00000001111	RPL13	100	85.849	Ailuropoda_melanoleuca
ENSG00000167526	RPL13	100	92.593	ENSACIG00000000422	rpl13	100	89.100	Amphilophus_citrinellus
ENSG00000167526	RPL13	100	89.683	ENSAOCG00000014635	rpl13	100	88.626	Amphiprion_ocellaris
ENSG00000167526	RPL13	100	89.683	ENSAPEG00000011271	rpl13	100	88.626	Amphiprion_percula
ENSG00000167526	RPL13	100	90.741	ENSATEG00000004902	rpl13	100	88.152	Anabas_testudineus
ENSG00000167526	RPL13	100	93.651	ENSACAG00000017072	RPL13	100	92.891	Anolis_carolinensis
ENSG00000167526	RPL13	100	99.206	ENSANAG00000030539	RPL13	100	98.780	Aotus_nancymaae
ENSG00000167526	RPL13	100	90.741	ENSACLG00000001642	rpl13	100	88.626	Astatotilapia_calliptera
ENSG00000167526	RPL13	100	90.741	ENSAMXG00000006495	rpl13	100	84.834	Astyanax_mexicanus
ENSG00000167526	RPL13	100	88.889	ENSBTAG00000033143	-	100	87.678	Bos_taurus
ENSG00000167526	RPL13	100	98.148	ENSBTAG00000012044	RPL13	72	97.630	Bos_taurus
ENSG00000167526	RPL13	100	61.905	WBGene00004425	rpl-13	99	57.282	Caenorhabditis_elegans
ENSG00000167526	RPL13	100	99.206	ENSCJAG00000016268	-	99	98.095	Callithrix_jacchus
ENSG00000167526	RPL13	100	99.206	ENSCJAG00000009672	-	100	98.780	Callithrix_jacchus
ENSG00000167526	RPL13	93	58.000	ENSCAFG00000002388	-	100	62.295	Canis_familiaris
ENSG00000167526	RPL13	100	99.206	ENSCAFG00000019840	RPL13	100	99.052	Canis_familiaris
ENSG00000167526	RPL13	100	92.593	ENSCAFG00020024795	-	75	85.093	Canis_lupus_dingo
ENSG00000167526	RPL13	100	99.206	ENSCAFG00020005125	RPL13	100	99.052	Canis_lupus_dingo
ENSG00000167526	RPL13	100	80.569	ENSCHIG00000026795	-	92	80.569	Capra_hircus
ENSG00000167526	RPL13	100	92.063	ENSCHIG00000017227	-	87	92.040	Capra_hircus
ENSG00000167526	RPL13	100	98.148	ENSCHIG00000001441	-	100	97.630	Capra_hircus
ENSG00000167526	RPL13	100	98.148	ENSTSYG00000027423	RPL13	100	97.630	Carlito_syrichta
ENSG00000167526	RPL13	100	99.206	ENSCPOG00000027348	RPL13	100	99.052	Cavia_porcellus
ENSG00000167526	RPL13	100	99.206	ENSCCAG00000024248	RPL13	100	98.780	Cebus_capucinus
ENSG00000167526	RPL13	100	83.333	ENSCATG00000038806	-	96	73.333	Cercocebus_atys
ENSG00000167526	RPL13	100	99.206	ENSCATG00000042426	RPL13	100	99.052	Cercocebus_atys
ENSG00000167526	RPL13	100	99.206	ENSCLAG00000003801	RPL13	100	99.052	Chinchilla_lanigera
ENSG00000167526	RPL13	100	98.148	ENSCSAG00000000476	-	100	98.104	Chlorocebus_sabaeus
ENSG00000167526	RPL13	100	96.296	ENSCPBG00000013618	RPL13	100	94.787	Chrysemys_picta_bellii
ENSG00000167526	RPL13	100	66.667	ENSCING00000002582	-	92	66.176	Ciona_intestinalis
ENSG00000167526	RPL13	100	68.254	ENSCSAVG00000007075	-	98	65.238	Ciona_savignyi
ENSG00000167526	RPL13	100	98.148	ENSCANG00000028258	RPL13	77	99.296	Colobus_angolensis_palliatus
ENSG00000167526	RPL13	100	80.569	ENSCGRG00001023328	-	100	80.569	Cricetulus_griseus_chok1gshd
ENSG00000167526	RPL13	100	98.413	ENSCGRG00001022563	Rpl13	100	98.104	Cricetulus_griseus_chok1gshd
ENSG00000167526	RPL13	93	75.635	ENSCGRG00001008381	-	100	75.635	Cricetulus_griseus_chok1gshd
ENSG00000167526	RPL13	85	78.333	ENSCGRG00000016503	-	100	78.333	Cricetulus_griseus_crigri
ENSG00000167526	RPL13	100	98.413	ENSCGRG00000014556	Rpl13	100	97.630	Cricetulus_griseus_crigri
ENSG00000167526	RPL13	100	88.095	ENSCSEG00000008346	rpl13	100	87.204	Cynoglossus_semilaevis
ENSG00000167526	RPL13	100	88.889	ENSCVAG00000019742	rpl13	100	87.678	Cyprinodon_variegatus
ENSG00000167526	RPL13	100	88.889	ENSDARG00000099380	rpl13	100	86.730	Danio_rerio
ENSG00000167526	RPL13	100	99.206	ENSDNOG00000034247	RPL13	100	98.578	Dasypus_novemcinctus
ENSG00000167526	RPL13	100	96.296	ENSDORG00000028330	Rpl13	100	98.235	Dipodomys_ordii
ENSG00000167526	RPL13	96	67.769	FBgn0011272	RpL13	93	63.366	Drosophila_melanogaster
ENSG00000167526	RPL13	100	69.048	ENSETEG00000004518	-	99	67.021	Echinops_telfairi
ENSG00000167526	RPL13	100	98.413	ENSETEG00000015057	-	98	82.857	Echinops_telfairi
ENSG00000167526	RPL13	100	73.016	ENSEBUG00000000730	rpl13	99	65.403	Eptatretus_burgeri
ENSG00000167526	RPL13	100	92.857	ENSEEUG00000011190	-	100	93.571	Erinaceus_europaeus
ENSG00000167526	RPL13	99	60.952	ENSEEUG00000006113	-	99	60.476	Erinaceus_europaeus
ENSG00000167526	RPL13	100	84.921	ENSELUG00000014509	rpl13	100	82.938	Esox_lucius
ENSG00000167526	RPL13	100	63.281	ENSFCAG00000029961	-	93	64.171	Felis_catus
ENSG00000167526	RPL13	100	98.413	ENSFCAG00000003338	RPL13	100	98.171	Felis_catus
ENSG00000167526	RPL13	100	91.270	ENSFALG00000003173	RPL13	100	90.047	Ficedula_albicollis
ENSG00000167526	RPL13	100	99.206	ENSFDAG00000011310	RPL13	100	99.052	Fukomys_damarensis
ENSG00000167526	RPL13	100	88.889	ENSFHEG00000006122	rpl13	100	87.678	Fundulus_heteroclitus
ENSG00000167526	RPL13	100	83.333	ENSGMOG00000002752	rpl13	100	79.621	Gadus_morhua
ENSG00000167526	RPL13	100	92.857	ENSGALG00000006179	RPL13	100	92.417	Gallus_gallus
ENSG00000167526	RPL13	100	87.302	ENSGAFG00000017260	rpl13	100	81.043	Gambusia_affinis
ENSG00000167526	RPL13	100	85.185	ENSGACG00000015752	rpl13	100	84.360	Gasterosteus_aculeatus
ENSG00000167526	RPL13	100	95.238	ENSGAGG00000003371	RPL13	100	94.313	Gopherus_agassizii
ENSG00000167526	RPL13	100	98.148	ENSGGOG00000025427	RPL13	100	99.432	Gorilla_gorilla
ENSG00000167526	RPL13	100	88.889	ENSGGOG00000026762	-	100	78.673	Gorilla_gorilla
ENSG00000167526	RPL13	100	90.741	ENSHBUG00000013579	rpl13	100	88.152	Haplochromis_burtoni
ENSG00000167526	RPL13	100	99.206	ENSHGLG00000010880	RPL13	100	98.578	Heterocephalus_glaber_female
ENSG00000167526	RPL13	100	99.206	ENSHGLG00100018449	RPL13	100	98.578	Heterocephalus_glaber_male
ENSG00000167526	RPL13	100	85.714	ENSHCOG00000002997	rpl13	100	85.308	Hippocampus_comes
ENSG00000167526	RPL13	100	85.185	ENSIPUG00000009775	rpl13	100	84.834	Ictalurus_punctatus
ENSG00000167526	RPL13	100	98.148	ENSSTOG00000011963	RPL13	100	96.682	Ictidomys_tridecemlineatus
ENSG00000167526	RPL13	100	83.333	ENSJJAG00000000236	-	100	82.938	Jaculus_jaculus
ENSG00000167526	RPL13	100	98.413	ENSJJAG00000014012	Rpl13	100	97.630	Jaculus_jaculus
ENSG00000167526	RPL13	100	90.741	ENSKMAG00000006540	rpl13	100	88.626	Kryptolebias_marmoratus
ENSG00000167526	RPL13	100	88.889	ENSLBEG00000026455	rpl13	100	87.204	Labrus_bergylta
ENSG00000167526	RPL13	96	69.643	ENSLACG00000002299	-	94	67.005	Latimeria_chalumnae
ENSG00000167526	RPL13	100	85.185	ENSLACG00000014843	-	94	81.890	Latimeria_chalumnae
ENSG00000167526	RPL13	100	90.741	ENSLACG00000013768	rpl13	100	88.152	Latimeria_chalumnae
ENSG00000167526	RPL13	100	64.815	ENSLACG00000000752	-	90	67.816	Latimeria_chalumnae
ENSG00000167526	RPL13	100	61.111	ENSLACG00000004644	-	97	66.474	Latimeria_chalumnae
ENSG00000167526	RPL13	100	81.481	ENSLACG00000005311	-	100	79.832	Latimeria_chalumnae
ENSG00000167526	RPL13	73	63.043	ENSLACG00000001306	-	91	67.769	Latimeria_chalumnae
ENSG00000167526	RPL13	100	90.741	ENSLOCG00000004063	rpl13	100	87.678	Lepisosteus_oculatus
ENSG00000167526	RPL13	100	99.206	ENSLAFG00000004054	RPL13	100	97.630	Loxodonta_africana
ENSG00000167526	RPL13	100	83.333	ENSMFAG00000046109	-	97	72.512	Macaca_fascicularis
ENSG00000167526	RPL13	100	98.578	ENSMFAG00000027717	-	100	98.578	Macaca_fascicularis
ENSG00000167526	RPL13	100	98.578	ENSMMUG00000017928	RPL13	100	98.578	Macaca_mulatta
ENSG00000167526	RPL13	100	85.185	ENSMMUG00000038060	-	96	71.429	Macaca_mulatta
ENSG00000167526	RPL13	100	98.148	ENSMNEG00000033097	-	86	75.439	Macaca_nemestrina
ENSG00000167526	RPL13	100	85.185	ENSMNEG00000030483	-	96	72.857	Macaca_nemestrina
ENSG00000167526	RPL13	100	85.185	ENSMLEG00000033776	-	96	74.286	Mandrillus_leucophaeus
ENSG00000167526	RPL13	100	98.780	ENSMLEG00000036728	-	100	98.780	Mandrillus_leucophaeus
ENSG00000167526	RPL13	100	88.889	ENSMAMG00000021552	rpl13	100	87.678	Mastacembelus_armatus
ENSG00000167526	RPL13	100	90.741	ENSMZEG00005014343	rpl13	100	88.626	Maylandia_zebra
ENSG00000167526	RPL13	100	92.593	ENSMGAG00000008027	RPL13	97	90.698	Meleagris_gallopavo
ENSG00000167526	RPL13	100	98.413	ENSMAUG00000020543	-	100	98.113	Mesocricetus_auratus
ENSG00000167526	RPL13	100	98.148	ENSMAUG00000016802	-	100	92.891	Mesocricetus_auratus
ENSG00000167526	RPL13	100	98.148	ENSMICG00000043954	-	100	97.630	Microcebus_murinus
ENSG00000167526	RPL13	100	99.206	ENSMICG00000027620	-	90	90.968	Microcebus_murinus
ENSG00000167526	RPL13	100	90.741	ENSMOCG00000011602	-	100	80.095	Microtus_ochrogaster
ENSG00000167526	RPL13	100	98.578	ENSMOCG00000009058	-	100	98.578	Microtus_ochrogaster
ENSG00000167526	RPL13	100	97.156	ENSMOCG00000002216	-	100	97.156	Microtus_ochrogaster
ENSG00000167526	RPL13	100	96.296	ENSMOCG00000021875	-	100	83.645	Microtus_ochrogaster
ENSG00000167526	RPL13	100	88.889	ENSMOCG00000016985	-	100	86.256	Microtus_ochrogaster
ENSG00000167526	RPL13	100	88.889	ENSMMOG00000016577	rpl13	100	88.152	Mola_mola
ENSG00000167526	RPL13	100	99.206	ENSMODG00000003663	RPL13	100	97.630	Monodelphis_domestica
ENSG00000167526	RPL13	100	88.889	ENSMALG00000020934	rpl13	100	88.152	Monopterus_albus
ENSG00000167526	RPL13	100	98.148	MGP_CAROLIEiJ_G0031676	Rpl13	100	97.630	Mus_caroli
ENSG00000167526	RPL13	100	98.148	ENSMUSG00000000740	Rpl13	100	98.104	Mus_musculus
ENSG00000167526	RPL13	100	98.148	MGP_PahariEiJ_G0023274	Rpl13	100	97.630	Mus_pahari
ENSG00000167526	RPL13	72	88.060	MGP_PahariEiJ_G0022842	-	100	88.060	Mus_pahari
ENSG00000167526	RPL13	100	98.148	MGP_SPRETEiJ_G0032794	Rpl13	100	98.104	Mus_spretus
ENSG00000167526	RPL13	100	91.270	MGP_SPRETEiJ_G0031839	-	78	92.965	Mus_spretus
ENSG00000167526	RPL13	99	56.459	ENSMPUG00000001481	-	96	55.024	Mustela_putorius_furo
ENSG00000167526	RPL13	100	99.206	ENSMLUG00000010950	RPL13	94	99.052	Myotis_lucifugus
ENSG00000167526	RPL13	100	98.148	ENSNGAG00000018467	Rpl13	100	97.630	Nannospalax_galili
ENSG00000167526	RPL13	89	79.825	ENSNGAG00000014655	-	95	78.378	Nannospalax_galili
ENSG00000167526	RPL13	100	77.778	ENSNGAG00000012072	-	95	69.767	Nannospalax_galili
ENSG00000167526	RPL13	100	90.741	ENSNBRG00000011031	rpl13	100	88.152	Neolamprologus_brichardi
ENSG00000167526	RPL13	100	79.630	ENSNLEG00000028759	-	100	78.302	Nomascus_leucogenys
ENSG00000167526	RPL13	100	100.000	ENSNLEG00000015774	RPL13	100	99.052	Nomascus_leucogenys
ENSG00000167526	RPL13	100	96.296	ENSODEG00000019351	-	100	91.943	Octodon_degus
ENSG00000167526	RPL13	100	98.413	ENSODEG00000004235	-	100	98.104	Octodon_degus
ENSG00000167526	RPL13	100	96.032	ENSODEG00000019915	-	100	94.787	Octodon_degus
ENSG00000167526	RPL13	100	98.148	ENSODEG00000019297	-	100	96.209	Octodon_degus
ENSG00000167526	RPL13	100	96.296	ENSODEG00000020384	-	100	96.209	Octodon_degus
ENSG00000167526	RPL13	100	98.148	ENSODEG00000019458	-	100	97.630	Octodon_degus
ENSG00000167526	RPL13	100	90.741	ENSONIG00000005934	rpl13	100	88.152	Oreochromis_niloticus
ENSG00000167526	RPL13	100	98.413	ENSOANG00000006729	RPL13	100	95.735	Ornithorhynchus_anatinus
ENSG00000167526	RPL13	100	94.444	ENSOCUG00000022399	-	100	92.417	Oryctolagus_cuniculus
ENSG00000167526	RPL13	100	96.296	ENSOCUG00000007536	-	100	90.521	Oryctolagus_cuniculus
ENSG00000167526	RPL13	100	96.296	ENSOCUG00000024415	-	100	93.365	Oryctolagus_cuniculus
ENSG00000167526	RPL13	100	88.889	ENSORLG00000007654	rpl13	100	88.152	Oryzias_latipes
ENSG00000167526	RPL13	100	90.741	ENSORLG00020009960	rpl13	100	89.100	Oryzias_latipes_hni
ENSG00000167526	RPL13	100	90.741	ENSORLG00015008108	rpl13	100	89.100	Oryzias_latipes_hsok
ENSG00000167526	RPL13	100	90.741	ENSOMEG00000001728	rpl13	100	89.573	Oryzias_melastigma
ENSG00000167526	RPL13	100	99.206	ENSOGAG00000026444	RPL13	100	98.578	Otolemur_garnettii
ENSG00000167526	RPL13	53	86.567	ENSOARG00000011291	-	50	86.567	Ovis_aries
ENSG00000167526	RPL13	100	90.741	ENSOARG00000003957	-	71	89.573	Ovis_aries
ENSG00000167526	RPL13	100	88.889	ENSPPAG00000041631	-	100	78.199	Pan_paniscus
ENSG00000167526	RPL13	100	98.148	ENSPPAG00000029415	-	100	99.429	Pan_paniscus
ENSG00000167526	RPL13	100	97.619	ENSPPAG00000042590	-	100	93.939	Pan_paniscus
ENSG00000167526	RPL13	100	63.281	ENSPPRG00000006057	-	86	65.000	Panthera_pardus
ENSG00000167526	RPL13	100	98.413	ENSPPRG00000003949	RPL13	100	98.171	Panthera_pardus
ENSG00000167526	RPL13	100	63.281	ENSPTIG00000014719	-	86	65.000	Panthera_tigris_altaica
ENSG00000167526	RPL13	100	96.296	ENSPTIG00000010985	RPL13	84	94.531	Panthera_tigris_altaica
ENSG00000167526	RPL13	100	100.000	ENSPTRG00000008480	RPL13	100	100.000	Pan_troglodytes
ENSG00000167526	RPL13	100	87.037	ENSPTRG00000047911	-	100	77.725	Pan_troglodytes
ENSG00000167526	RPL13	100	97.619	ENSPTRG00000041770	-	100	93.939	Pan_troglodytes
ENSG00000167526	RPL13	100	99.206	ENSPANG00000031667	RPL13	100	99.052	Papio_anubis
ENSG00000167526	RPL13	100	90.741	ENSPKIG00000001789	rpl13	100	89.100	Paramormyrops_kingsleyae
ENSG00000167526	RPL13	100	95.238	ENSPSIG00000015634	RPL13	100	94.313	Pelodiscus_sinensis
ENSG00000167526	RPL13	100	88.095	ENSPMGG00000006067	rpl13	100	86.256	Periophthalmus_magnuspinnatus
ENSG00000167526	RPL13	100	98.148	ENSPEMG00000010342	Rpl13	100	98.104	Peromyscus_maniculatus_bairdii
ENSG00000167526	RPL13	100	88.889	ENSPFOG00000013435	rpl13	100	87.678	Poecilia_formosa
ENSG00000167526	RPL13	100	88.889	ENSPLAG00000004085	rpl13	100	87.678	Poecilia_latipinna
ENSG00000167526	RPL13	100	88.889	ENSPMEG00000015599	rpl13	100	87.678	Poecilia_mexicana
ENSG00000167526	RPL13	100	88.889	ENSPREG00000023190	rpl13	100	87.204	Poecilia_reticulata
ENSG00000167526	RPL13	100	98.413	ENSPCAG00000015461	RPL13	100	97.630	Procavia_capensis
ENSG00000167526	RPL13	100	99.206	ENSPCOG00000024647	RPL13	100	98.578	Propithecus_coquereli
ENSG00000167526	RPL13	100	99.206	ENSPVAG00000015130	RPL13	100	95.261	Pteropus_vampyrus
ENSG00000167526	RPL13	100	90.741	ENSPNYG00000013189	rpl13	100	88.152	Pundamilia_nyererei
ENSG00000167526	RPL13	100	90.741	ENSPNAG00000002916	rpl13	100	87.678	Pygocentrus_nattereri
ENSG00000167526	RPL13	100	97.156	ENSRNOG00000015335	Rpl13	100	97.156	Rattus_norvegicus
ENSG00000167526	RPL13	100	92.063	ENSRNOG00000029227	AABR07054469.1	100	91.943	Rattus_norvegicus
ENSG00000167526	RPL13	100	96.296	ENSRNOG00000059545	AC114446.1	100	89.151	Rattus_norvegicus
ENSG00000167526	RPL13	100	96.296	ENSRNOG00000061438	LOC100360491	100	95.735	Rattus_norvegicus
ENSG00000167526	RPL13	100	96.296	ENSRNOG00000055911	LOC100361259	100	96.209	Rattus_norvegicus
ENSG00000167526	RPL13	100	85.185	ENSRBIG00000010434	-	89	73.333	Rhinopithecus_bieti
ENSG00000167526	RPL13	100	99.206	ENSRBIG00000031937	RPL13	100	99.052	Rhinopithecus_bieti
ENSG00000167526	RPL13	100	99.206	ENSRROG00000036999	-	100	99.052	Rhinopithecus_roxellana
ENSG00000167526	RPL13	100	85.185	ENSRROG00000025626	-	89	73.333	Rhinopithecus_roxellana
ENSG00000167526	RPL13	100	56.349	YMR142C	RPL13B	100	49.057	Saccharomyces_cerevisiae
ENSG00000167526	RPL13	100	55.556	YDL082W	RPL13A	100	48.585	Saccharomyces_cerevisiae
ENSG00000167526	RPL13	100	99.206	ENSSBOG00000028589	-	100	98.780	Saimiri_boliviensis_boliviensis
ENSG00000167526	RPL13	100	79.630	ENSSBOG00000019618	-	100	73.832	Saimiri_boliviensis_boliviensis
ENSG00000167526	RPL13	100	55.556	ENSSHAG00000010433	-	100	61.628	Sarcophilus_harrisii
ENSG00000167526	RPL13	100	90.741	ENSSFOG00015019594	rpl13	100	87.678	Scleropages_formosus
ENSG00000167526	RPL13	100	88.889	ENSSMAG00000021443	rpl13	100	85.782	Scophthalmus_maximus
ENSG00000167526	RPL13	100	89.683	ENSSDUG00000001262	rpl13	100	88.626	Seriola_dumerili
ENSG00000167526	RPL13	100	89.683	ENSSLDG00000021182	rpl13	100	88.626	Seriola_lalandi_dorsalis
ENSG00000167526	RPL13	96	58.197	ENSSLDG00000007067	-	94	51.196	Seriola_lalandi_dorsalis
ENSG00000167526	RPL13	100	94.444	ENSSPUG00000006904	RPL13	89	92.500	Sphenodon_punctatus
ENSG00000167526	RPL13	100	89.683	ENSSPAG00000020434	rpl13	100	88.626	Stegastes_partitus
ENSG00000167526	RPL13	100	72.222	ENSSSCG00000003723	-	99	70.952	Sus_scrofa
ENSG00000167526	RPL13	100	73.810	ENSSSCG00000036198	-	100	68.246	Sus_scrofa
ENSG00000167526	RPL13	98	69.919	ENSSSCG00000033294	-	99	63.285	Sus_scrofa
ENSG00000167526	RPL13	100	96.825	ENSSSCG00000024974	RPL13	100	96.682	Sus_scrofa
ENSG00000167526	RPL13	100	66.667	ENSSSCG00000029020	-	96	57.209	Sus_scrofa
ENSG00000167526	RPL13	99	68.269	ENSSSCG00000007813	-	99	68.269	Sus_scrofa
ENSG00000167526	RPL13	100	88.889	ENSTGUG00000007874	RPL13	100	88.152	Taeniopygia_guttata
ENSG00000167526	RPL13	100	87.037	ENSTRUG00000021170	rpl13	100	86.256	Takifugu_rubripes
ENSG00000167526	RPL13	100	89.683	ENSTNIG00000009349	rpl13	100	89.100	Tetraodon_nigroviridis
ENSG00000167526	RPL13	100	98.148	ENSTTRG00000004374	RPL13	100	97.630	Tursiops_truncatus
ENSG00000167526	RPL13	100	98.578	ENSUAMG00000020363	RPL13	100	98.578	Ursus_americanus
ENSG00000167526	RPL13	96	84.615	ENSVPAG00000000569	-	100	88.889	Vicugna_pacos
ENSG00000167526	RPL13	100	94.444	ENSVVUG00000003839	-	100	91.469	Vulpes_vulpes
ENSG00000167526	RPL13	94	58.537	ENSVVUG00000005779	-	92	56.190	Vulpes_vulpes
ENSG00000167526	RPL13	100	92.593	ENSXETG00000019835	rpl13	100	89.100	Xenopus_tropicalis
ENSG00000167526	RPL13	100	88.889	ENSXCOG00000011315	rpl13	100	87.204	Xiphophorus_couchianus
ENSG00000167526	RPL13	100	88.889	ENSXMAG00000003221	rpl13	100	87.678	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	-	TAS	Process
GO:0003723	RNA binding	22658674.	HDA	Function
GO:0003735	structural constituent of ribosome	12962325.	NAS	Function
GO:0005515	protein binding	17474147.21044950.24725412.24965446.25416956.	IPI	Function
GO:0005634	nucleus	21630459.	HDA	Component
GO:0005730	nucleolus	-	IDA	Component
GO:0005783	endoplasmic reticulum	-	IDA	Component
GO:0005829	cytosol	-	IDA	Component
GO:0005829	cytosol	-	TAS	Component
GO:0006412	translation	12962325.	NAS	Process
GO:0006413	translational initiation	-	TAS	Process
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	-	TAS	Process
GO:0016020	membrane	19946888.	HDA	Component
GO:0019083	viral transcription	-	TAS	Process
GO:0022625	cytosolic large ribosomal subunit	12962325.	HDA	Component
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component
GO:0022626	cytosolic ribosome	9582194.	TAS	Component

EuRBPDB

Note: to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Note: Click here to get the extension of tumor abbreviations.

Select Dataset :

Input Drug :

Input Cell Line :

Eesembl ID

Cell lines and drugs in GSE70138 or GSE92742

Note: to get the extension of tumor abbreviations.