EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
17611393Bridge linkage role played by CD98hc of anti-tumor drug resistance and cancer metastasis on cisplatin-resistant ovarian cancer cells.Cancer Biol Ther2007 JunYang H-
21750865Expression of 4F2hc (CD98) in pulmonary neuroendocrine tumors.Oncol Rep2011 OctKaira Kdoi: 10.3892/or.2011.1384
28179310Prognostic Significance of the Expression of CD98 (4F2hc) in Gastric Cancer.Anticancer Res2017 FebSatoh T-
28350098SLC3A2 is upregulated in human osteosarcoma and promotes tumor growth through the PI3K/Akt signaling pathway.Oncol Rep2017 MayZhu Bdoi: 10.3892/or.2017.5530
30470261CircSLC3A2 functions as an oncogenic factor in hepatocellular carcinoma by sponging miR-490-3p and regulating PPM1F expression.Mol Cancer2018 Nov 23Wang Hdoi: 10.1186/s12943-018-0909-7.
22077314Correlation of L-type amino acid transporter 1 and CD98 expression with triple negative breast cancer prognosis.Cancer Sci2012 FebFuruya Mdoi: 10.1111/j.1349-7006.2011.02151.x
18813831Inhibition of system L (LAT1/CD98hc) reduces the growth of cultured human breast cancer cells.Oncol Rep2008 OctShennan DB-
25041835Association of CD98, integrin β1, integrin β3 and Fak with the progression and liver metastases of colorectal cancer.Pathol Res Pract2014 OctSun Cdoi: 10.1016/j.prp.2014.06.016
24359579CD98hc (SLC3A2) drives integrin-dependent renal cancer cell behavior.Mol Cancer2013 Dec 21Poettler Mdoi: 10.1186/1476-4598-12-169.
25084765CD147-CD98hc complex contributes to poor prognosis of non-small cell lung cancer patients through promoting cell proliferation via the PI3K/Akt signaling pathway.Ann Surg Oncol2014 DecFei Fdoi: 10.1245/s10434-014-3816-1
19777189CD98 expression is associated with poor prognosis in resected non-small-cell lung cancer with lymph node metastases.Ann Surg Oncol2009 DecKaira Kdoi: 10.1245/s10434-009-0685-0

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1162881905Missense_MutationnovelR247L0.1
BLCAchr11628533785'Flanknovel0.07
BLCAchr11628550185'Flanknovel0.17
BLCAchr1162885211Nonsense_Mutationrs147281603Q386*0.39
BLCAchr11628554545'Flanknovel0.59
BLCAchr1162888192In_Frame_DelnovelV503_A505del0.1
BLCAchr11628546795'Flanknovel0.44
BLCAchr11628553575'Flanknovel0.31
BLCAchr1162881326SilentnovelV202V0.33
BRCAchr1162856295Missense_MutationnovelS9L0.78
BRCAchr1162885495Missense_MutationNAL445V0.38
BRCAchr11628552565'Flanknovel0.11
BRCAchr11628540595'Flanknovel0.29
BRCAchr11628533465'Flanknovel0.17
BRCAchr11628555625'Flanknovel0.19
BRCAchr1162884646SilentNAF359F0.33
BRCAchr1162882057Frame_Shift_DelNAK300Rfs*310.19
CESCchr1162882057Frame_Shift_DelNAK300Rfs*310.52
CESCchr11628552475'Flanknovel0.09
CESCchr11628536845'FlankNA0.25
CESCchr11628538695'Flanknovel0.28
CESCchr11628534305'Flanknovel0.35
CESCchr1162882057Frame_Shift_DelNAK300Rfs*310.4
CESCchr1162882018Missense_MutationnovelG285S0.48
CESCchr1162885205Missense_Mutationrs751067361D384N0.42
CESCchr1162884457Missense_MutationNAD332N0.24
CESCchr1162888462SilentnovelI554I0.41
CHOLchr1162882038Missense_MutationnovelD291E0.37
CHOLchr1162888377Missense_MutationnovelL526P0.35
COADchr1162885205Missense_Mutationrs751067361D384N0.26
COADchr1162888464Missense_MutationNAR555H0.14
COADchr1162888655Missense_MutationNAH619Y0.3
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.38
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.25
COADchr1162882914Missense_MutationNAR303H0.39
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.39
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.14
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.2
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.13
COADchr1162888638Missense_Mutationrs374261898R613H0.32
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.43
COADchr1162888370Missense_Mutationrs779207226R524W0.35
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.19
COADchr1162885513Nonsense_MutationnovelR451*0.13
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.44
COADchr1162888483SilentnovelE561E0.11
COADchr1162888638Missense_Mutationrs374261898R613H0.38
COADchr1162882057Frame_Shift_DelNAK300Rfs*310.08
COADchr1162888400Missense_Mutationrs753612198R534C0.27
COADchr1162888356Missense_MutationnovelL519P0.28
ESCAchr11628553265'Flanknovel0.23
ESCAchr11628550075'Flanknovel0.29
ESCAchr1162856271Frame_Shift_DelnovelM1_?90.26
ESCAchr11628535125'Flanknovel0.35
GBMchr1162885345Missense_MutationNAW430C0.25
GBMchr1162885275Missense_MutationnovelD407G0.11
GBMchr1162885214Frame_Shift_InsnovelQ387Lfs*160.1
GBMchr11628531625'Flanknovel0.34
HNSCchr11628535825'Flanknovel0.3
HNSCchr1162888375SilentnovelR525R0.23
HNSCchr11628528985'Flanknovel0.39
HNSCchr11628533785'Flanknovel0.08
HNSCchr1162885518SilentnovelL452L0.04
HNSCchr1162881890Splice_Regionnovel0.15
HNSCchr1162882044SilentnovelL293L0.22
HNSCchr11628553295'Flankrs7509103760.31
HNSCchr1162888543Silentrs143862119S581S0.19
HNSCchr1162888637Missense_Mutationrs537183284R613C0.24
HNSCchr1162888625Missense_MutationnovelL609V0.34
HNSCchr1162884466Missense_MutationNAE335K0.12
HNSCchr1162888369Silentrs755372517F523F0.16
HNSCchr11628531625'Flanknovel0.64
KIRCchr1162856306Missense_MutationNAV13M0.28
KIRCchr1162882057Frame_Shift_DelNAK300Rfs*310.36
KIRCchr1162882938Missense_MutationNAN311S0.31
KIRCchr11628539065'FlankNA0.14
KIRCchr1162885198SilentNAN381N0.25
KIRCchr1162882971Missense_MutationNAQ322R0.3
KIRPchr1162881394In_Frame_DelnovelR226_D229del0.17
KIRPchr1162884635Missense_MutationnovelA356T0.33
KIRPchr1162884636Missense_MutationnovelA356V0.32
KIRPchr1162881083Frame_Shift_Insrs778450636Q123Afs*380.38
KIRPchr1162882971Missense_MutationNAQ322R0.36
KIRPchr11628551625'Flanknovel0.37
LGGchr11628528965'Flanknovel0.19
LGGchr1162882057Frame_Shift_DelNAK300Rfs*310.56
LIHCchr1162881330Missense_MutationNAI204V0.34
LIHCchr1162881320SilentnovelA200A0.25
LUADchr1162881890Splice_Regionnovel0.18
LUADchr1162888340Missense_MutationNAE514K0.16
LUADchr1162882057Frame_Shift_DelNAK300Rfs*310.23
LUADchr1162888648SilentnovelL616L0.13
LUADchr11628555645'Flanknovel0.1
LUADchr11628530545'Flanknovel0.19
LUADchr11628887623'UTRnovel0.26
LUADchr1162888620Missense_MutationNAS607F0.09
LUADchr11628533525'Flankrs5761855560.07
LUADchr1162881916SilentnovelL251L0.31
LUADchr11628552175'FlankNA0.13
LUADchr1162888564SilentnovelS588S0.4
LUADchr11628530415'Flanknovel0.37
LUADchr1162882947Missense_MutationnovelG314V0.42
LUADchr11628556795'Flanknovel0.33
LUADchr1162882944Missense_MutationnovelR313L0.28
LUADchr1162888591SilentNAL597L0.23
LUADchr1162888213Missense_MutationNAV509L0.37
LUADchr1162885203Missense_MutationnovelS383F0.14
LUSCchr11628551045'Flanknovel0.37
LUSCchr1162885278Missense_MutationnovelS408F0.23
LUSCchr11628530705'FlankNA0.11
LUSCchr11628531845'Flanknovel0.14
LUSCchr11628562635'UTRnovel0.28
LUSCchr1162888375SilentNAR525R0.39
LUSCchr1162888638Missense_MutationNAR613P0.27
LUSCchr11628532945'Flanknovel0.12
LUSCchr11628546505'Flanknovel0.49
LUSCchr11628531595'Flanknovel0.29
LUSCchr11628534265'Flanknovel0.62
LUSCchr1162856305Silentrs148497008V12V0.19
LUSCchr1162882964Missense_MutationNAS320P0.29
LUSCchr1162888549SilentnovelL583L0.4
LUSCchr11628529875'Flanknovel0.43
MESOchr1162882057Frame_Shift_DelNAK300Rfs*310.7
OVchr11628550295'Flanknovel0.07
OVchr11628529095'Flanknovel0.21
OVchr1162884505Missense_MutationnovelR348W0.04
OVchr11628887613'UTRnovel0.37
OVchr11628545225'Flanknovel0.14
OVchr11628526075'FlankNA0.56
PAADchr1162881155Missense_MutationnovelK145N0.15
PAADchr11628530255'Flanknovel0.09
PAADchr11628530145'Flanknovel0.19
PCPGchr11628546965'Flanknovel0.32
PRADchr11628535775'Flanknovel0.23
PRADchr1162882030Missense_MutationNAD289N0.2
READchr11628533915'Flanknovel0.06
READchr11628554035'Flanknovel0.41
SARCchr11628562325'UTRnovel0.09
SARCchr11628552325'Flanknovel0.12
SARCchr11628554875'Flanknovel0.41
SKCMchr11628550345'FlankNA0.27
SKCMchr11628532535'Flanknovel0.3
SKCMchr1162885538Missense_MutationnovelT459I0.48
SKCMchr1162888524Missense_Mutationrs138529750S575L0.29
SKCMchr11628528775'Flanknovel0.33
SKCMchr1162888353Missense_MutationNAS518F0.51
SKCMchr11628553925'Flanknovel0.26
SKCMchr1162881300Missense_MutationNAL194F0.88
SKCMchr11628528165'FlankNA0.33
SKCMchr1162882919Missense_MutationNAI305L0.16
SKCMchr11628529975'Flankrs7722536560.41
SKCMchr11628549535'Flanknovel0.56
SKCMchr11628549545'Flanknovel0.57
SKCMchr11628529515'Flanknovel0.31
STADchr11628533315'Flanknovel0.06
STADchr11628540015'FlankNA0.17
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.35
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.29
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.15
STADchr11628552915'Flanknovel0.13
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.38
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.18
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.72
STADchr1162885502Missense_Mutationrs1140538A447V0.09
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.42
STADchr1162885330SilentnovelA425A0.1
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.38
STADchr11628551835'Flanknovel0.08
STADchr11628552205'Flanknovel0.45
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.34
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.31
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.15
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.48
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.21
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.4
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.29
STADchr11628551435'Flanknovel0.26
STADchr11628532225'Flanknovel0.41
STADchr1162888559Missense_MutationnovelA587T0.37
STADchr1162881237Missense_MutationNAA173T0.36
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.38
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.4
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.15
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.18
STADchr1162888652Missense_MutationNAP618S0.31
STADchr11628530495'Flanknovel0.3
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.12
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.18
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.21
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.24
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.24
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.36
STADchr1162882057Frame_Shift_DelNAK300Rfs*310.45
THCAchr1162881148Frame_Shift_InsnovelV144Pfs*180.17
THCAchr11628552265'Flanknovel0.08
UCECchr1162882925Missense_MutationNAD307Y0.24
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.17
UCECchr1162882047Missense_MutationnovelL294F0.32
UCECchr1162881264Missense_MutationnovelR182S0.09
UCECchr11628531805'Flanknovel0.21
UCECchr11628556295'Flankrs7710515740.48
UCECchr11628534545'Flanknovel0.26
UCECchr11628550255'Flanknovel0.21
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.38
UCECchr11628526665'Flanknovel0.23
UCECchr11628529575'Flanknovel0.22
UCECchr1162881075Nonsense_MutationnovelE119*0.37
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.36
UCECchr1162881975SilentNAD270D0.13
UCECchr1162884457Missense_MutationNAD332N0.22
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.25
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.41
UCECchr1162881269Nonsense_MutationnovelW183*0.21
UCECchr1162888401Missense_MutationNAR534H0.11
UCECchr11628532535'Flanknovel0.33
UCECchr11628553025'Flankrs1866197410.39
UCECchr1162881140Missense_MutationnovelK140N0.38
UCECchr1162884523Missense_MutationnovelK354E0.08
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.24
UCECchr1162882019Missense_MutationnovelG285D0.44
UCECchr1162888677Missense_MutationnovelF626S0.24
UCECchr1162888450SilentnovelL550L0.2
UCECchr1162884462SilentnovelA333A0.32
UCECchr1162888544Missense_MutationnovelD582N0.42
UCECchr11628530365'Flanknovel0.43
UCECchr11628531285'Flanknovel0.3
UCECchr11628551075'Flanknovel0.38
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.44
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.47
UCECchr1162885189SilentnovelA378A0.06
UCECchr1162888526Missense_MutationNAA576T0.21
UCECchr1162885232Missense_MutationnovelE393K0.26
UCECchr11628528185'Flanknovel0.4
UCECchr11628551385'Flanknovel0.39
UCECchr11628553295'Flankrs7509103760.48
UCECchr1162884652SilentnovelA361A0.43
UCECchr1162882889Intronnovel0.2
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.45
UCECchr1162885204Silentrs767945415S383S0.41
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.5
UCECchr1162885598Missense_MutationnovelL479R0.41
UCECchr1162888429Silentrs138892942A543A0.45
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.45
UCECchr11628529195'Flanknovel0.26
UCECchr11628534255'Flanknovel0.08
UCECchr11628535025'Flanknovel0.11
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.26
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.42
UCECchr11628530115'Flanknovel0.17
UCECchr11628549585'Flanknovel0.16
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.62
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.34
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.47
UCECchr1162888451Missense_MutationnovelF551V0.11
UCECchr11628556895'Flanknovel0.46
UCECchr1162856341SilentnovelS24S0.09
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.39
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.4
UCECchr11628528835'Flanknovel0.17
UCECchr11628534305'Flanknovel0.19
UCECchr11628538555'Flanknovel0.22
UCECchr11628548995'Flanknovel0.21
UCECchr11628554085'Flanknovel0.22
UCECchr1162881056Missense_MutationnovelE112D0.14
UCECchr1162888638Missense_Mutationrs374261898R613H0.39
UCECchr1162885555Frame_Shift_InsnovelS467Qfs*50.21
UCECchr1162882057Frame_Shift_DelNAK300Rfs*310.39
UCECchr11628538445'Flanknovel0.29
UCECchr11628540515'Flanknovel0.07
UCECchr11628551255'Flanknovel0.11
UCECchr11628550215'Flanknovel0.09
UCECchr11628531325'Flanknovel0.29
UCECchr1162885341Missense_MutationnovelR429H0.32
UCSchr11628537335'Flanknovel0.2
UVMchr11628551125'Flanknovel0.07

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ESCAAMP0.16850.018342
TGCTDEL0.70670.21504

Survival Analysis
CancerP-value Q-value
STAD0.025

Kaplan-Meier Survival Analysis

ACC0.0056

Kaplan-Meier Survival Analysis

UCS0.026

Kaplan-Meier Survival Analysis

HNSC0.0047

Kaplan-Meier Survival Analysis

SKCM0.00039

Kaplan-Meier Survival Analysis

BLCA0.0021

Kaplan-Meier Survival Analysis

UCEC0.0025

Kaplan-Meier Survival Analysis

LIHC0.0014

Kaplan-Meier Survival Analysis

LGG0.002

Kaplan-Meier Survival Analysis

LUAD0.0009

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000168003 (Gene tree)
Gene ID
6520
Gene Symbol
SLC3A2
Alias
4T2HC|4F2|NACAE|CD98|CD98HC|4F2HC|MDU1
Full Name
solute carrier family 3 member 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
32,872 bases
Position
chr11:62,856,012-62,888,883
Accession
11026
RBP type
non-canonical RBP
Summary
This gene is a member of the solute carrier family and encodes a cell surface, transmembrane protein. The protein exists as the heavy chain of a heterodimer, covalently bound through di-sulfide bonds to one of several possible light chains. The encoded transporter plays a role in regulation of intracellular calcium levels and transports L-type amino acids. Alternatively spliced transcript variants, encoding different isoforms, have been characterized. [provided by RefSeq, Nov 2010]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
21282044CD98hc (SLC3A2) is a key regulator of keratinocyte adhesion.J Dermatol Sci2011 MarLemaitre Gdoi: 10.1016/j.jdermsci.2010.12.007
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000537508SLC3A2-209583--- (aa)--
ENST00000457660SLC3A2-205873--- (aa)--
ENST00000542793SLC3A2-219539--- (aa)--
ENST00000535296SLC3A2-2062084-ENSP00000444236599 (aa)-F5GZS6
ENST00000536981SLC3A2-2081486-ENSP00000444439175 (aa)-F5GZI0
ENST00000377891SLC3A2-2042222-ENSP00000367123631 (aa)-J3KPF3
ENST00000377890SLC3A2-2032161-ENSP00000367122630 (aa)-P08195
ENST00000539458SLC3A2-213565-ENSP00000438032145 (aa)-F5H0E2
ENST00000546253SLC3A2-222582--- (aa)--
ENST00000537839SLC3A2-210584--- (aa)--
ENST00000538682SLC3A2-2121368--- (aa)--
ENST00000535768SLC3A2-207597--- (aa)--
ENST00000544377SLC3A2-221589-ENSP00000442135135 (aa)-F5H867
ENST00000539891SLC3A2-2151300-ENSP0000043835367 (aa)-F5H056
ENST00000542922SLC3A2-2202174--- (aa)--
ENST00000546312SLC3A2-223564--- (aa)--
ENST00000541372SLC3A2-216269-ENSP0000044425047 (aa)-F5GZR9
ENST00000539507SLC3A2-214534-ENSP00000440819122 (aa)-H0YFX4
ENST00000377889SLC3A2-2021993-ENSP00000367121568 (aa)-P08195
ENST00000541425SLC3A2-217595-ENSP0000044585824 (aa)-H0YH36
ENST00000541649SLC3A2-218515--- (aa)--
ENST00000338663SLC3A2-2011904-ENSP00000340815529 (aa)-P08195
ENST00000538084SLC3A2-211741-ENSP00000440001247 (aa)-H0YFS2
Gene Model
Click here to download ENSG00000168003's gene model file
Pathways
Pathway IDPathway NameSource
hsa04150mTOR signaling pathwayKEGG
hsa04216FerroptosisKEGG
hsa04974Protein digestion and absorptionKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000168003Myocardial Infarction5.8015742E-004-
ENSG00000168003Myocardial Infarction2.6274260E-004-
ENSG00000168003Heart Failure6.1115535E-004-
ENSG00000168003Platelet Function Tests7.4600000E-006-
ENSG00000168003Platelet Function Tests2.5900000E-006-
ENSG00000168003Platelet Function Tests1.1263300E-005-
ENSG00000168003Platelet Function Tests1.7172800E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000168003rs1444530061162887212GIron status biomarkers (transferrin saturation)28334935[0.57-1.32] unit decrease0.946EFO_0006333
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000168003's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000168003SLC3A210086.667ENSMUSG00000010095Slc3a210087.826Mus_musculus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.HDAFunction
GO:0003725double-stranded RNA binding21266579.IDAFunction
GO:0003824catalytic activity-IEAFunction
GO:0005432calcium:sodium antiporter activity10673541.TASFunction
GO:0005515protein binding10506149.10631289.12270127.20374249.25998567.28298427.IPIFunction
GO:0005634nucleus-IDAComponent
GO:0005829cytosol-IDAComponent
GO:0005886plasma membrane12270127.25998567.IDAComponent
GO:0005886plasma membrane-TASComponent
GO:0005975carbohydrate metabolic process-IEAProcess
GO:0006816calcium ion transport3036867.NASProcess
GO:0006865amino acid transport10673541.TASProcess
GO:0009986cell surface19581412.HDAComponent
GO:0009986cell surface25063885.IDAComponent
GO:0015175neutral amino acid transmembrane transporter activity-ISSFunction
GO:0015827tryptophan transport-ISSProcess
GO:0016020membrane19946888.HDAComponent
GO:0016021integral component of membrane3476959.NASComponent
GO:0016324apical plasma membrane-IEAComponent
GO:0035725sodium ion transmembrane transport-IEAProcess
GO:0042470melanosome-IEAComponent
GO:0043330response to exogenous dsRNA21266579.IMPProcess
GO:0045296cadherin binding25468996.HDAFunction
GO:0050900leukocyte migration-TASProcess
GO:0070062extracellular exosome19056867.19199708.20458337.23533145.HDAComponent
GO:1902475L-alpha-amino acid transmembrane transport-TASProcess
GO:1903801L-leucine import across plasma membrane-ISSProcess
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