Cancer | Chr | Position | Mutation Type | dbSNP | Protein-change | Allele Freq | RBD |
---|---|---|---|---|---|---|---|
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BLCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
CESC | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
DLBC | |||||||
ESCA | |||||||
ESCA | |||||||
GBM | |||||||
HNSC | |||||||
KIRC | |||||||
KIRP | |||||||
KIRP | |||||||
LGG | |||||||
LUAD | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
OV | |||||||
OV | |||||||
PRAD | |||||||
READ | |||||||
READ | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
STAD | |||||||
THCA | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UVM |
Cancer | Type | Freq | Q-value |
---|---|---|---|
ACC | |||
PAAD |
Cancer | P-value | Q-value |
---|---|---|
THYM | ||
UCS | ||
HNSC | ||
SKCM | ||
TGCT | ||
KIRP | ||
PAAD | ||
CESC | ||
LAML | ||
KICH | ||
UCEC | ||
LIHC | ||
LGG | ||
THCA | ||
OV |
Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENST00000422797 | LIMS1-207 | 1544 | - | ENSP00000402322 | 100 (aa) | - | F8WE10 |
ENST00000338045 | LIMS1-202 | 1876 | XM_005263946 | ENSP00000337598 | 387 (aa) | XP_005264003 | P48059 |
ENST00000449684 | LIMS1-210 | 492 | - | - | - (aa) | - | - |
ENST00000462817 | LIMS1-211 | 566 | - | - | - (aa) | - | - |
ENST00000434274 | LIMS1-209 | 779 | - | ENSP00000410751 | 55 (aa) | - | F8WB59 |
ENST00000393310 | LIMS1-203 | 4392 | XM_005263951 | ENSP00000376987 | 325 (aa) | XP_005264008 | P48059 |
ENST00000414829 | LIMS1-206 | 439 | XM_017004096 | ENSP00000399267 | 117 (aa) | XP_016859585 | F8WC86 |
ENST00000410093 | LIMS1-205 | 1526 | - | ENSP00000386926 | 329 (aa) | - | P48059 |
ENST00000332345 | LIMS1-201 | 1235 | XM_005263950 | ENSP00000331775 | 325 (aa) | XP_005264007 | P48059 |
ENST00000428064 | LIMS1-208 | 637 | - | ENSP00000390862 | 176 (aa) | - | C9JF46 |
ENST00000409441 | LIMS1-204 | 1627 | XM_005263948 | ENSP00000387264 | 362 (aa) | XP_005264005 | P48059 |
ENST00000474038 | LIMS1-212 | 679 | - | - | - (aa) | - | - |
ENST00000542845 | LIMS1-214 | 727 | - | ENSP00000446121 | 209 (aa) | - | A0A0M3HER1 |
ENST00000544547 | LIMS1-215 | 4461 | XM_005263949 | ENSP00000437912 | 337 (aa) | XP_005264006 | P48059 |
ENST00000496653 | LIMS1-213 | 626 | - | - | - (aa) | - | - |
ensgID | SNP | Chromosome | Position | SNP-risk | Trait | PubmedID | 95% CI | Or or BEAT | EFO ID |
---|---|---|---|---|---|---|---|---|---|
ENSG00000169756 | rs6542772 | 2 | 108558159 | C | Excessive hairiness | 29895819 | [1.17-1.37] | 1.27 | HP_0001007 |
ENSG00000169756 | rs111995966 | 2 | 108558513 | G | Monocyte chemoattractant protein-1 levels | 27989323 | [0.084-0.206] SD units decrease | 0.1452 | EFO_0004749 |
ENSG00000169756 | rs1866188 | 2 | 108640696 | A | Eyebrow thickness | 30248107 | EFO_0007823 | ||
ENSG00000169756 | rs826681 | 2 | 108615619 | C | Low density lipoprotein cholesterol levels | 29507422 | unit decrease | 0.025 | EFO_0004611 |
ENSG00000169756 | rs826681 | 2 | 108615619 | C | Total cholesterol levels | 29507422 | unit decrease | 0.025 | EFO_0004574 |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0001837 | epithelial to mesenchymal transition | 20926685. | IMP | Process |
GO:0005515 | protein binding | 10574708.12432066.15721255.18339839.19074270.20926685.21390327.23088713.23414517.23455922.23877428.25416956.25852190. | IPI | Function |
GO:0005829 | cytosol | - | TAS | Component |
GO:0005886 | plasma membrane | - | IEA | Component |
GO:0005911 | cell-cell junction | 20926685. | IMP | Component |
GO:0005925 | focal adhesion | 21423176. | HDA | Component |
GO:0005925 | focal adhesion | 20926685.21390327. | IDA | Component |
GO:0005925 | focal adhesion | 19117955. | IDA | Component |
GO:0007569 | cell aging | 7517666. | TAS | Process |
GO:0008270 | zinc ion binding | 19074270. | IDA | Function |
GO:0010628 | positive regulation of gene expression | 20926685. | IMP | Process |
GO:0010811 | positive regulation of cell-substrate adhesion | 20926685. | IMP | Process |
GO:0019901 | protein kinase binding | 20926685. | IPI | Function |
GO:0032991 | protein-containing complex | - | IEA | Component |
GO:0033209 | tumor necrosis factor-mediated signaling pathway | 21343177. | IMP | Process |
GO:0034329 | cell junction assembly | - | TAS | Process |
GO:0043547 | positive regulation of GTPase activity | 20926685. | IMP | Process |
GO:0045184 | establishment of protein localization | 20926685. | IMP | Process |
GO:0045892 | negative regulation of transcription, DNA-templated | 21390327. | IDA | Process |
GO:0048471 | perinuclear region of cytoplasm | 21390327. | IDA | Component |
GO:0050678 | regulation of epithelial cell proliferation | 20926685. | IMP | Process |
GO:0051291 | protein heterooligomerization | - | IEA | Process |
GO:0051894 | positive regulation of focal adhesion assembly | 20926685. | IMP | Process |
GO:0071560 | cellular response to transforming growth factor beta stimulus | 21390327. | IEP | Process |
GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading | 20926685. | IMP | Process |
GO:1901224 | positive regulation of NIK/NF-kappaB signaling | 21343177. | IMP | Process |