EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
26617690Up-regulation of AKAP13 and MAGT1 on cytoplasmic membrane in progressive hepatocellular carcinoma: a novel target for prognosis.Int J Clin Exp Pathol2015 Sep 1Molee P-
26272591Protein Kinase A-induced tamoxifen resistance is mediated by anchoring protein AKAP13.BMC Cancer2015 Aug 14Bentin Toaldo Cdoi: 10.1186/s12885-015-1591-4.
16234258Association of genetic variants in the Rho guanine nucleotide exchange factor AKAP13 with familial breast cancer.Carcinogenesis2006 MarWirtenberger M-

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1585743666Missense_MutationnovelH2745N0.4
ACCchr1585581612Missense_MutationnovelE1182K0.16
BLCAchr1585533618SilentnovelL72L0.29
BLCAchr1585533823Missense_Mutationrs767360299R141G0.24
BLCAchr1585664757Splice_SitenovelX1664_splice0.3
BLCAchr1585741352Missense_MutationnovelE2639K0.31
BLCAchr1585543950Silentrs751735705L219L0.51
BLCAchr1585735613Missense_MutationnovelD2499N0.17
BLCAchr1585579149Missense_MutationNAE361K0.15
BLCAchr1585543930Missense_MutationNAH213Y0.23
BLCAchr1585658569Missense_MutationnovelR1593K0.16
BLCAchr1585580756SilentnovelS896S0.53
BLCAchr1585581232Missense_MutationnovelD1055G0.14
BLCAchr1585710630Missense_MutationnovelI1862F0.63
BLCAchr1585718141SilentnovelR1995R0.12
BLCAchr1585581491SilentnovelV1141V0.18
BLCAchr1585730667SilentNAA2414A0.2
BLCAchr1585580410Missense_Mutationrs530733643S781L0.46
BLCAchr1585543770Splice_SitenovelX160_splice0.39
BLCAchr1585580469Missense_Mutationrs751149430A801T0.21
BLCAchr1585662405Intronrs7639088180.35
BLCAchr1585521544SilentNAV50V0.15
BLCAchr1585575154Missense_MutationnovelS229C0.05
BLCAchr1585645851Missense_MutationnovelR1424K0.17
BLCAchr15857446823'UTRrs7716246710.1
BLCAchr1585579171Missense_Mutationrs144259676S368F0.19
BLCAchr1585580175Missense_Mutationrs537413224P703S0.11
BLCAchr1585581770SilentnovelV1234V0.31
BLCAchr1585723295SilentnovelL2240L0.2
BLCAchr1585579593Missense_MutationnovelE509Q0.06
BLCAchr1585717396Missense_MutationnovelD1948N0.52
BLCAchr1585684794Missense_MutationnovelS1737F0.16
BLCAchr1585580528SilentNAT820T0.28
BLCAchr1585533703Missense_MutationNAQ101E0.25
BLCAchr1585543922Missense_MutationNAR210Q0.15
BLCAchr1585741421Missense_MutationNAE2662Q0.37
BLCAchr1585693348SilentnovelK1787K0.29
BRCAchr1585684779Missense_MutationnovelP1732L0.07
BRCAchr1585723166SilentnovelK2197K0.5
BRCAchr1585579772Silentrs755297450T568T0.11
BRCAchr1585741418Missense_MutationNAL2661F0.28
BRCAchr1585579295SilentnovelV409V0.05
BRCAchr1585579296Missense_MutationnovelK410Q0.05
BRCAchr1585579288Missense_Mutationrs768166553C407Y0.22
BRCAchr1585719201Missense_MutationNAD2043H0.31
BRCAchr1585579812Missense_MutationnovelV582I0.22
BRCAchr1585655597Missense_MutationNAE1519K0.27
BRCAchr1585580547Missense_MutationnovelG827C0.1
BRCAchr1585579146Missense_MutationNAV360I0.24
BRCAchr1585743496Missense_MutationnovelS2688C0.33
BRCAchr1585743666Missense_MutationnovelH2745Y0.19
BRCAchr1585580301Missense_Mutationrs747774362D745Y0.13
BRCAchr1585581386Missense_MutationnovelE1106D0.42
BRCAchr1585533868Nonsense_MutationNAQ156*0.33
BRCAchr1585664703Nonsense_MutationNAS1647*0.27
BRCAchr1585693330SilentnovelD1781D0.27
BRCAchr1585580580Missense_Mutationrs748198504R838W0.22
BRCAchr1585741363Missense_MutationNAQ2642H0.13
BRCAchr1585726451Nonsense_MutationnovelQ2263*0.09
BRCAchr1585721988Splice_Regionnovel0.29
BRCAchr1585521575Missense_MutationnovelG61R0.18
CESCchr15857478773'UTRnovel0.09
CESCchr1585684831SilentNAF1749F0.39
CESCchr1585743742Missense_MutationnovelS2770F0.26
CESCchr1585533703Missense_MutationNAQ101E0.18
CESCchr1585580136Missense_MutationNAS690P0.35
CESCchr1585585734Missense_MutationNAD1358H0.48
CESCchr1585580663SilentNAL865L0.12
CESCchr1585533773In_Frame_InsnovelP124_P125insKGN0.08
CESCchr1585579213Frame_Shift_InsnovelV383Tfs*150.07
CESCchr1585543878Missense_MutationNAI195M0.2
CESCchr1585743603Missense_MutationNAE2724K0.23
CESCchr15857446853'UTRnovel0.56
CESCchr1585658534Splice_Regionnovel0.31
CESCchr1585645909SilentNAL1443L0.16
CESCchr1585730547SilentnovelL2374L0.26
CESCchr1585579002Nonsense_MutationnovelE312*0.4
CESCchr1585579595Missense_MutationnovelE509D0.5
CESCchr1585579684Missense_MutationnovelA539V0.38
CESCchr1585581829Missense_Mutationrs138629757R1254H0.37
CESCchr1585645895Missense_MutationnovelS1439G0.37
CESCchr1585715806Missense_MutationnovelR1873H0.36
CESCchr15857473973'UTRnovel0.25
CESCchr15857475963'UTRnovel0.22
CESCchr1585580001Nonsense_MutationnovelQ645*0.27
CESCchr1585723173Missense_MutationNAR2200C0.45
CESCchr1585718147Missense_MutationNAE1997K0.23
CESCchr15857447833'UTRnovel0.44
CESCchr15857475863'UTRnovel0.2
CESCchr1585585728Missense_MutationnovelE1356K0.06
CESCchr1585575224Missense_MutationNAI252M0.45
CESCchr1585521538Silentrs116628862R48R0.26
CHOLchr1585582017Missense_MutationnovelE1317K0.34
COADchr1585579756Frame_Shift_DelNAT565Qfs*180.46
COADchr1585581765Missense_MutationnovelM1233L0.1
COADchr1585580498Missense_MutationnovelE810D0.14
COADchr1585579794Nonsense_MutationnovelE576*0.09
COADchr1585741239Missense_Mutationrs369963716R2601H0.47
COADchr1585579850Missense_MutationnovelK594N0.14
COADchr1585722031Missense_MutationnovelG2098D0.26
COADchr1585581652Frame_Shift_InsnovelT1197Hfs*90.33
COADchr15857447213'UTRnovel0.43
COADchr1585578996Missense_MutationnovelA310T0.1
COADchr1585582081Missense_MutationNAP1338H0.67
COADchr1585581691Missense_MutationnovelA1208V0.16
COADchr1585658545Missense_Mutationrs181593659R1585Q0.34
COADchr1585580017Missense_MutationnovelS650L0.05
COADchr1585730691SilentNAK2422K0.36
COADchr1585730617Frame_Shift_InsNAT2400Nfs*30.33
COADchr1585533932Intronrs7629407490.36
COADchr1585710616Nonsense_MutationnovelS1857*0.36
COADchr1585580418Missense_MutationnovelT784A0.07
COADchr1585743811Missense_Mutationrs368581372R2793H0.31
COADchr1585669792Missense_MutationnovelS1688C0.06
COADchr1585580501Missense_MutationnovelK811N0.05
COADchr1585585816Missense_MutationNAT1385S0.38
COADchr1585741443Missense_Mutationrs746154680R2669H0.38
COADchr1585580524Missense_Mutationrs769879931H819R0.43
COADchr1585722227Splice_Regionnovel0.34
COADchr1585727452Missense_MutationNAR2359Q0.08
COADchr1585533688Missense_MutationNAA96T0.24
COADchr1585581109Missense_MutationNAA1014V0.49
COADchr1585684816SilentNAK1744K0.2
COADchr1585719105Missense_MutationnovelR2011C0.19
COADchr1585741482Missense_Mutationrs772008595R2682Q0.29
COADchr1585580659Missense_MutationNAS864T0.29
COADchr1585664600Missense_Mutationrs777916874G1613R0.31
COADchr1585723251Missense_MutationnovelD2226Y0.12
COADchr1585723289SilentnovelV2238V0.33
COADchr1585580734Missense_MutationnovelN889S0.15
COADchr1585708076Missense_MutationNAV1841A0.13
COADchr1585727219Missense_MutationnovelQ2326K0.1
COADchr1585580754Missense_MutationNAS896C0.26
COADchr1585581453Missense_Mutationrs779149455V1129I0.33
COADchr1585719261Missense_MutationnovelS2063A0.26
COADchr1585727429Missense_Mutationrs780698233K2351N0.3
COADchr1585575272SilentnovelP268P0.27
COADchr1585581035Frame_Shift_DelNAF990Lfs*180.38
COADchr1585693291SilentnovelE1768E0.2
COADchr15857477963'UTRnovel0.38
COADchr1585579989Missense_MutationnovelH641D0.05
COADchr1585579990In_Frame_InsnovelH641delinsQILS0.05
COADchr1585743543Missense_MutationnovelP2704T0.09
COADchr1585741453SilentnovelA2672A0.34
COADchr1585581631Missense_MutationnovelL1188R0.1
COADchr15857448293'UTRnovel0.45
DLBCchr1585533890Intronnovel0.31
ESCAchr1585533613Missense_MutationnovelQ71K0.27
ESCAchr1585579311Missense_MutationnovelL415I0.21
ESCAchr1585735034Missense_MutationnovelT2442I0.1
ESCAchr1585741106Missense_MutationnovelA2557T0.1
ESCAchr1585575260Silentrs139228217E264E0.38
ESCAchr1585579165Missense_MutationnovelD366G0.34
ESCAchr1585664724Missense_MutationnovelD1654V0.12
ESCAchr1585575196Missense_MutationnovelS243F0.61
ESCAchr1585744663Missense_MutationnovelE2810Q0.44
ESCAchr1585719134SilentnovelY2020Y0.43
ESCAchr1585533872Missense_MutationNAS157N0.12
ESCAchr1585726433Missense_MutationnovelD2257N0.4
GBMchr1585581717Nonsense_Mutationrs777358897R1217*0.11
GBMchr15857448113'UTRnovel0.3
GBMchr1585581346Missense_MutationnovelG1093E0.05
GBMchr1585580741SilentNAD891D0.45
GBMchr1585727451Missense_MutationNAR2359G0.32
GBMchr1585580078Missense_MutationnovelN670K0.08
GBMchr1585580532Missense_MutationnovelT822S0.12
GBMchr1585581684Missense_MutationnovelD1206H0.2
GBMchr1585715900Missense_MutationnovelS1904R0.19
GBMchr1585645838Missense_MutationnovelV1420L0.08
GBMchr1585580296Missense_Mutationrs769554632R743Q0.31
GBMchr1585645865Missense_MutationnovelK1429Q0.4
GBMchr1585743689SilentnovelQ2752Q0.37
GBMchr1585744647Silentrs753208276V2804V0.33
GBMchr1585579594Missense_MutationnovelE509V0.08
GBMchr1585580300SilentnovelK744K0.31
GBMchr1585580818Missense_MutationnovelV917D0.12
GBMchr1585645934Missense_MutationnovelD1452H0.08
GBMchr1585580562Missense_MutationnovelS832A0.36
GBMchr1585743560Silentrs373781999S2709S0.16
GBMchr1585581829Missense_Mutationrs138629757R1254H0.46
GBMchr1585645939Missense_MutationnovelS1453R0.08
GBMchr1585581566Missense_MutationnovelD1166E0.04
GBMchr1585743685Missense_MutationnovelS2751I0.11
GBMchr1585580139Missense_Mutationrs774873759E691K0.42
GBMchr1585579512Missense_MutationnovelM482L0.14
GBMchr1585655657Missense_MutationnovelD1539N0.28
GBMchr1585533744Missense_MutationNAN114K0.2
HNSCchr1585743533Missense_MutationnovelF2700L0.11
HNSCchr1585579780Missense_MutationnovelS571L0.4
HNSCchr1585717345Missense_MutationnovelD1931N0.38
HNSCchr1585740243Missense_MutationnovelH2527Y0.24
HNSCchr1585575255Missense_MutationnovelH263D0.27
HNSCchr1585581468Missense_MutationnovelV1134M0.78
HNSCchr1585658545Missense_MutationnovelR1585L0.05
HNSCchr1585730563Missense_MutationnovelE2380Q0.31
HNSCchr1585741400Missense_MutationnovelR2655C0.17
HNSCchr1585719100Missense_MutationnovelH2009R0.36
HNSCchr1585715807SilentnovelR1873R0.2
HNSCchr1585580642Missense_MutationnovelH858Q0.14
HNSCchr1585645863Nonsense_MutationNAS1428*0.3
HNSCchr1585579699Missense_MutationnovelD544V0.1
KIRCchr1585575204Missense_Mutationrs796265954H246Y0.21
KIRCchr1585580373Missense_MutationNAM769V0.34
KIRCchr1585580413Missense_MutationNAD782G0.17
KIRCchr1585693401Nonsense_MutationnovelC1805delinsW*LF0.05
KIRPchr1585580082Missense_MutationnovelV672L0.46
KIRPchr1585579415SilentnovelD449D0.39
KIRPchr1585726429SilentNAL2255L0.23
KIRPchr1585579312Missense_MutationnovelL415P0.3
KIRPchr1585579408Missense_MutationnovelQ447P0.46
LAMLchr1585575182Silentrs374214307P238P0.33
LGGchr1585741130Missense_MutationnovelP2565T0.38
LGGchr1585719169Missense_MutationNAQ2032P0.4
LGGchr1585543783Nonsense_Mutationrs576412136R164*0.3
LGGchr1585580246Missense_MutationnovelQ726H0.46
LGGchr1585581588Missense_Mutationrs147919379A1174T0.38
LGGchr1585581977Missense_MutationnovelF1303L0.42
LGGchr15857447863'UTRrs5587674060.47
LGGchr1585533707Missense_MutationNAF102S0.48
LGGchr1585533986Intronnovel0.38
LIHCchr1585722288Missense_MutationNAV2146G0.1
LIHCchr1585580741SilentNAD891D0.14
LIHCchr1585743746SilentNAT2771T0.17
LIHCchr1585580939SilentNAG957G0.29
LIHCchr1585580940Nonsense_MutationNAQ958*0.29
LIHCchr1585581673Nonsense_MutationnovelS1202*0.2
LIHCchr1585579371Missense_MutationnovelD435Y0.39
LIHCchr1585730656Missense_MutationNAT2411A0.2
LUADchr1585533771SilentnovelG123G0.14
LUADchr1585582047Missense_MutationnovelA1327S0.12
LUADchr1585581409Missense_MutationnovelD1114G0.31
LUADchr1585722259Missense_MutationnovelR2136S0.32
LUADchr1585693365Frame_Shift_InsnovelS1795Qfs*120.29
LUADchr1585579624Missense_Mutationrs201778847S519C0.13
LUADchr1585693445Missense_MutationNAC1820S0.35
LUADchr1585579995Missense_Mutationrs199949454Q643E0.08
LUADchr1585743525Missense_MutationNAP2698A0.06
LUADchr1585655704Silentrs766774367S1554S0.23
LUADchr1585684769Missense_MutationnovelP1729S0.27
LUADchr1585717340Missense_MutationnovelS1929L0.17
LUADchr1585533584Missense_MutationnovelG61D0.35
LUADchr1585723317Splice_SitenovelX2248_splice0.07
LUADchr1585585824Splice_SitenovelX1387_splice0.15
LUADchr1585723285Missense_MutationNAS2237N0.06
LUADchr1585580043Missense_MutationNAD659N0.19
LUADchr1585521573Missense_MutationnovelP60L0.39
LUADchr1585581024Missense_MutationNAA986S0.13
LUADchr15854857165'UTRnovel0.31
LUADchr1585727111Missense_MutationnovelE2290Q0.21
LUADchr1585579549Missense_MutationNAW494L0.37
LUADchr1585723095Missense_MutationNAL2174I0.29
LUADchr1585719119SilentNAI2015I0.2
LUSCchr1585719173Missense_MutationNAQ2033H0.33
LUSCchr1585580347Missense_MutationNAS760L0.13
LUSCchr1585579662Missense_MutationnovelS532C0.73
LUSCchr1585639413Missense_MutationnovelD1401N0.69
LUSCchr1585581886Missense_MutationnovelG1273V0.22
LUSCchr1585581887SilentnovelG1273G0.21
LUSCchr1585579034Silentrs371691695P322P0.07
LUSCchr1585664592Missense_MutationnovelA1610V0.57
LUSCchr1585717355Missense_MutationnovelN1934S0.23
LUSCchr1585664703Missense_MutationNAS1647L0.07
LUSCchr1585581721Missense_MutationNAA1218V0.14
LUSCchr1585581958Missense_MutationNAT1297I0.15
LUSCchr1585664642Missense_MutationnovelA1627S0.28
LUSCchr1585579467Missense_MutationNAG467S0.16
LUSCchr1585655600Missense_Mutationrs769400321G1520S0.11
LUSCchr1585741411Missense_MutationNAQ2658H0.15
LUSCchr1585655597Missense_MutationnovelE1519Q0.16
LUSCchr1585743596Missense_MutationnovelL2721F0.04
LUSCchr1585580895Missense_MutationNAS943P0.29
LUSCchr1585582087Missense_MutationnovelQ1340L0.27
LUSCchr1585533669Missense_MutationNAF89L0.09
LUSCchr1585533670Missense_MutationNAH90Y0.09
LUSCchr1585543935Missense_MutationnovelK214N0.17
LUSCchr1585581673Missense_MutationNAS1202L0.17
LUSCchr1585533791Missense_MutationnovelN130S0.23
LUSCchr1585655721Missense_MutationNAP1560L0.23
LUSCchr1585735089SilentNAS2460S0.32
LUSCchr1585579238SilentNAD390D0.07
LUSCchr1585723173Missense_MutationNAR2200C0.28
LUSCchr1585543870Missense_MutationNAL193F0.47
LUSCchr1585669811Missense_MutationNAI1694M0.58
LUSCchr1585581359SilentNAL1097L0.13
LUSCchr1585581097Missense_MutationNAQ1010P0.23
LUSCchr1585581345Missense_MutationNAG1093W0.41
LUSCchr1585727155SilentNAG2304G0.25
LUSCchr1585581397Missense_MutationnovelH1110R0.19
LUSCchr1585719115Missense_MutationnovelK2014M0.11
LUSCchr1585662389Intronnovel0.24
LUSCchr1585723305Missense_MutationnovelA2244S0.44
LUSCchr1585579683Missense_MutationNAA539T0.24
LUSCchr1585580642Silentrs202087369H858H0.08
LUSCchr1585579077Missense_MutationnovelE337Q0.21
OVchr1585581392SilentnovelI1108I0.06
OVchr1585662389Intronnovel0.04
OVchr1585581990Missense_MutationnovelS1308C0.12
OVchr1585684821Missense_MutationNAS1746I0.11
OVchr1585580030SilentnovelS654S0.05
OVchr1585580945Frame_Shift_InsnovelT960Hfs*60.03
OVchr1585579989Missense_MutationnovelH641Y0.1
OVchr1585581373Missense_MutationnovelE1102G0.04
OVchr1585580009SilentnovelG647G0.05
OVchr1585580562Missense_MutationnovelS832P0.08
OVchr1585579881Missense_MutationnovelT605P0.46
OVchr1585579938Missense_MutationnovelG624R0.3
OVchr1585581469Missense_MutationnovelV1134E0.06
OVchr1585581470SilentnovelV1134V0.05
OVchr1585581148Missense_MutationnovelE1027G0.04
OVchr1585580945Frame_Shift_InsnovelT960Hfs*60.04
OVchr1585581012Frame_Shift_DelnovelN982Ifs*270.2
OVchr1585743682Missense_MutationnovelT2750N0.08
OVchr1585579924Missense_MutationnovelD619V0.05
OVchr1585730524Nonsense_MutationNAQ2367*0.28
OVchr1585580275Missense_MutationnovelV736E0.21
OVchr1585715839Missense_MutationNAT1884I0.22
OVchr1585730575Missense_MutationnovelR2384G0.1
OVchr1585580011Missense_MutationnovelK648I0.05
OVchr1585581061Missense_MutationnovelN998T0.06
OVchr1585579795Missense_MutationnovelE576G0.05
OVchr1585580304Missense_MutationnovelV746M0.22
OVchr1585580879Missense_MutationnovelI937M0.07
OVchr1585580265Missense_Mutationrs775639445P733A0.12
PAADchr1585723272Missense_MutationnovelV2233I0.45
PAADchr1585669751SilentnovelF1674F0.17
PAADchr1585533615Missense_MutationnovelQ71H0.06
PAADchr1585579708Missense_MutationnovelK547R0.18
PAADchr1585581868Missense_MutationnovelG1267E0.2
PCPGchr1585655733Missense_Mutationrs555050692H1564R0.47
PRADchr1585741455Missense_MutationNAE2673G0.11
PRADchr1585723140Missense_MutationnovelD2189N0.07
PRADchr15857447963'UTRnovel0.13
PRADchr1585664585Missense_MutationnovelG1608R0.21
PRADchr1585723173Missense_MutationNAR2200C0.38
READchr1585585713Missense_MutationNAV1351M0.2
READchr1585726424Missense_MutationNAL2254I0.75
READchr1585719106Missense_Mutationrs778424032R2011H0.33
READchr1585580511Missense_MutationnovelT815S0.12
READchr1585579200Missense_MutationnovelR378G0.09
READchr1585534003Intronnovel0.27
READchr1585693309Missense_MutationNAE1774D0.36
READchr1585727111Nonsense_MutationnovelE2290*0.37
READchr1585580552SilentnovelP828P0.28
SARCchr1585575190Missense_MutationnovelD241G0.4
SARCchr1585723172SilentnovelV2199V0.13
SARCchr1585743797Missense_Mutationrs35204082K2788N0.55
SKCMchr1585581750Missense_MutationnovelP1228S0.48
SKCMchr1585543872Silentrs754330702L193L0.17
SKCMchr1585693375SilentnovelS1796S0.41
SKCMchr1585727450SilentNAA2358A0.21
SKCMchr1585575270Missense_MutationnovelP268S0.36
SKCMchr1585682183SilentNAF1709F0.3
SKCMchr1585581256Missense_MutationNAS1063F0.13
SKCMchr1585581567Missense_Mutationrs771647350H1167Y0.45
SKCMchr1585581692SilentNAA1208A0.2
SKCMchr1585727063Splice_Regionnovel0.09
SKCMchr1585727444SilentNAT2356T0.19
SKCMchr1585722314Missense_MutationNAV2155I0.4
SKCMchr1585581911Silentrs761455307S1281S0.33
SKCMchr1585585775SilentnovelG1371G0.24
SKCMchr1585533631Missense_MutationNAE77K0.45
SKCMchr1585581671SilentNAL1201L0.25
SKCMchr1585655437SilentNAA1465A0.47
SKCMchr1585718132Missense_MutationnovelV1992M0.14
SKCMchr1585718133Missense_MutationnovelV1992E0.14
SKCMchr1585743740SilentNAA2769A0.56
SKCMchr1585581363Missense_MutationNAG1099S0.11
SKCMchr1585684831SilentNAF1749F0.17
SKCMchr1585582069Missense_MutationnovelK1334R0.39
SKCMchr1585735095SilentnovelP2462P0.32
SKCMchr1585735096Missense_Mutationrs759792670R2463W0.32
SKCMchr1585743549Missense_MutationNAE2706K0.44
SKCMchr1585579171Missense_Mutationrs144259676S368F0.45
SKCMchr1585581608Missense_MutationNAD1180E0.21
SKCMchr1585735100Missense_MutationNAR2464K0.33
SKCMchr1585645896Missense_Mutationrs373476329S1439N0.41
SKCMchr1585582059Missense_MutationNAE1331K0.18
SKCMchr1585533685Nonsense_MutationnovelE95*0.12
SKCMchr1585575258Missense_MutationNAE264K0.15
SKCMchr1585740246Missense_MutationNAL2528F0.75
SKCMchr1585715811Missense_Mutationrs760882035R1875W0.2
SKCMchr1585723175SilentnovelR2200R0.5
SKCMchr1585580366SilentNAV766V0.17
SKCMchr1585543826Missense_MutationNAR178K0.28
SKCMchr1585533641Missense_MutationNAP80L0.12
SKCMchr1585715808Missense_MutationNAP1874S0.17
SKCMchr1585580635Missense_MutationNAL856R0.29
SKCMchr1585581258Missense_MutationNAP1064S0.17
SKCMchr1585715815Missense_MutationnovelS1876F0.32
SKCMchr1585715816Silentrs764970319S1876S0.32
SKCMchr1585723320Missense_MutationNAE2249K0.45
SKCMchr1585741259Missense_Mutationrs750119172R2608C0.4
SKCMchr1585743619Missense_MutationNAP2729L0.36
SKCMchr15857446933'UTRnovel0.26
SKCMchr1585533682Missense_MutationnovelD94N0.47
STADchr1585723083Missense_Mutationrs764296768E2170Q0.2
STADchr1585579635Missense_Mutationrs759395748V523I0.14
STADchr1585579374In_Frame_InsnovelQ436delinsPE0.26
STADchr1585723173Missense_MutationNAR2200C0.1
STADchr1585735605Missense_Mutationrs371824645T2496M0.29
STADchr1585575235Frame_Shift_InsnovelE258Lfs*240.31
STADchr1585662397Intronnovel0.39
STADchr1585581089Silentrs568102019L1007L0.16
STADchr1585741378SilentnovelY2647Y0.22
STADchr1585730625SilentnovelT2400T0.13
STADchr1585723173Missense_MutationNAR2200C0.09
STADchr1585533932Intronnovel0.14
STADchr1585743640Missense_MutationNAR2736L0.16
STADchr1585485746Missense_MutationNAP9L0.33
STADchr1585645829Missense_MutationNAF1417L0.25
STADchr1585581278Missense_MutationNAK1070N0.23
STADchr1585580923Missense_MutationnovelR952I0.11
STADchr1585581680Silentrs202239836H1204H0.44
STADchr1585727182SilentNAV2313V0.36
STADchr1585579365Missense_MutationNAP433S0.09
STADchr1585735624Frame_Shift_DelNAK2504Rfs*500.24
STADchr1585735564Silentrs201887818G2482G0.25
STADchr1585533828Missense_MutationNAH142Q0.16
STADchr1585718028Missense_MutationNAE1957G0.11
STADchr1585578943Missense_MutationnovelK292R0.11
STADchr1585581513Frame_Shift_DelnovelP1150Sfs*20.24
STADchr1585579206Frame_Shift_DelnovelE381Kfs*290.45
STADchr1585743786Frame_Shift_DelNAK2787Rfs*340.53
STADchr1585581748Missense_MutationnovelT1227S0.51
STADchr1585735056SilentNAS2449S0.35
STADchr1585719133Missense_MutationNAY2020C0.08
STADchr1585581364Missense_MutationnovelG1099V0.24
STADchr1585581164SilentNAA1032A0.08
STADchr1585741182Missense_MutationNAQ2582R0.29
STADchr1585521519Missense_Mutationrs142964345R42H0.16
STADchr1585734992Missense_Mutationrs780717590V2428A0.03
STADchr1585741050Missense_Mutationrs777033018V2538A0.11
STADchr1585682184Missense_MutationNAH1710Y0.17
STADchr1585682164Missense_MutationNAR1703Q0.45
STADchr1585719112Frame_Shift_DelnovelL2013Pfs*40.12
STADchr1585735624Frame_Shift_DelNAK2504Rfs*500.47
STADchr1585655635Silentrs750404650G1531G0.15
STADchr1585580795SilentNAT909T0.13
TGCTchr1585533722Missense_MutationnovelA107G0.12
THCAchr1585575245In_Frame_InsnovelS259_D260insYF0.06
THCAchr1585727128SilentNAE2295E0.11
THCAchr1585662430IntronNA0.25
THCAchr1585575232In_Frame_InsnovelL255delinsFCLP0.03
THCAchr1585581586Frame_Shift_InsnovelA1174Ifs*60.04
UCECchr1585579742SilentnovelE558E0.32
UCECchr1585580175Missense_MutationnovelP703T0.22
UCECchr1585533932Intronrs7629407490.56
UCECchr15857447383'UTRnovel0.49
UCECchr1585710596SilentNAL1850L0.29
UCECchr1585580296Missense_Mutationrs769554632R743Q0.27
UCECchr1585580548Missense_MutationNAG827D0.49
UCECchr1585579320Missense_MutationnovelC418R0.42
UCECchr1585581391Missense_MutationnovelI1108T0.06
UCECchr1585719177Missense_MutationnovelV2035I0.2
UCECchr1585743597Missense_MutationnovelD2722N0.34
UCECchr15857478653'UTRnovel0.48
UCECchr1585580203Missense_MutationnovelP712Q0.29
UCECchr1585727454Nonsense_MutationNAE2360*0.39
UCECchr1585655779SilentnovelN1579N0.39
UCECchr1585718148Missense_MutationnovelE1997G0.41
UCECchr1585580970Missense_MutationnovelI968F0.31
UCECchr1585579178SilentNAR370R0.13
UCECchr1585735624Frame_Shift_DelNAK2504Rfs*500.24
UCECchr1585715912Missense_MutationnovelQ1908H0.29
UCECchr1585740240Missense_MutationnovelV2526I0.43
UCECchr1585521519Missense_Mutationrs142964345R42H0.18
UCECchr1585710582Missense_Mutationrs112971613P1846S0.21
UCECchr1585533643Missense_Mutationrs146142499V81M0.27
UCECchr1585521531Missense_MutationnovelS46I0.03
UCECchr1585723261Missense_Mutationrs767950472R2229Q0.25
UCECchr1585740235Missense_MutationNAS2524I0.19
UCECchr1585533929Intronnovel0.23
UCECchr1585575211Missense_Mutationrs756880152R248Q0.2
UCECchr1585579245Frame_Shift_InsnovelT393Rfs*190.14
UCECchr1585581613Missense_MutationNAE1182G0.26
UCECchr1585693433Missense_MutationNAD1816Y0.31
UCECchr1585727117Missense_MutationnovelA2292T0.09
UCECchr1585740237Missense_Mutationrs761515628V2525I0.28
UCECchr1585715923Missense_MutationnovelG1912V0.11
UCECchr1585743757Missense_MutationNAG2775E0.27
UCECchr1585581065Missense_MutationnovelK999N0.18
UCECchr1585723184Missense_MutationnovelE2203D0.24
UCECchr1585579743Missense_Mutationrs74597724E559K0.48
UCECchr1585645852SilentnovelR1424R0.61
UCECchr1585708057Silentrs752671158L1835L0.41
UCECchr1585579285Missense_MutationnovelD406G0.3
UCECchr1585580923Missense_MutationnovelR952I0.5
UCECchr1585582030Missense_Mutationrs779156339S1321N0.3
UCECchr1585579851Missense_MutationnovelD595Y0.5
UCECchr1585582038Missense_MutationnovelG1324R0.3
UCECchr1585655560Silentrs772184636Q1506Q0.32
UCECchr1585655710SilentnovelR1556R0.12
UCECchr1585723166Missense_MutationnovelK2197N0.43
UCECchr1585723291Missense_MutationnovelF2239C0.45
UCECchr1585735627Missense_MutationnovelK2503N0.47
UCECchr1585579233Missense_Mutationrs770701124V389M0.47
UCECchr1585579442SilentnovelQ458Q0.39
UCECchr1585580223Missense_MutationnovelS719P0.22
UCECchr1585655638Silentrs752578910D1532D0.24
UCECchr1585662431Intronnovel0.26
UCECchr1585718076Missense_MutationnovelA1973V0.23
UCECchr1585579450Missense_MutationNAS461F0.39
UCECchr1585581020Silentrs201078519P984P0.28
UCECchr1585723276Missense_Mutationrs750905368R2234H0.38
UCECchr15857474733'UTRnovel0.13
UCECchr15857476063'UTRrs5530319010.32
UCECchr1585743798In_Frame_DelNAN2789del0.26
UCECchr1585582081Missense_MutationNAP1338H0.49
UCECchr1585578929Splice_SitenovelX288_splice0.27
UCECchr15857461663'UTRnovel0.26
UCECchr15857462843'UTRnovel0.38
UCECchr1585718065Frame_Shift_DelnovelK1969Nfs*310.41
UCECchr1585684843Missense_MutationnovelK1753N0.09
UCECchr1585579338Missense_MutationnovelE424K0.33
UCECchr1585718018Missense_MutationnovelD1954Y0.4
UCECchr1585743631Missense_MutationnovelS2733I0.49
UCECchr1585727166Missense_MutationNAP2308L0.28
UCECchr1585658545Missense_Mutationrs181593659R1585Q0.45
UCECchr1585719291Missense_MutationnovelL2073I0.32
UCECchr1585578978Missense_MutationNAA304T0.31
UCECchr1585581511Missense_MutationnovelG1148A0.08
UCECchr15857478883'UTRnovel0.1
UCECchr1585735624Frame_Shift_DelNAK2504Rfs*500.42
UCECchr1585581745Missense_MutationNAS1226N0.43
UCECchr1585655441Missense_MutationnovelD1467Y0.4
UCECchr1585533736Missense_MutationnovelA112T0.29
UCECchr1585575323SilentnovelQ285Q0.3
UCECchr1585579801Missense_MutationnovelA578V0.43
UCECchr15857478663'UTRrs1881341090.21
UCECchr1585580578Frame_Shift_DelNAT837Sfs*40.36
UCECchr1585581901Missense_MutationNAM1278T0.36
UCECchr1585533676Missense_Mutationrs114690403V92I0.22
UCECchr1585579371Missense_Mutationrs754487409D435N0.26
UCECchr1585580395Missense_MutationnovelD776G0.26
UCECchr1585727171Missense_MutationnovelM2310V0.11
UCECchr1585693388Missense_MutationNAG1801S0.16
UCECchr1585715887Missense_Mutationrs371321602S1900L0.24
UCECchr1585533806Missense_MutationnovelK135T0.28
UCECchr1585578983Missense_MutationnovelQ305H0.21
UCECchr15857474373'UTRrs5284670090.5
UCECchr1585579588Missense_MutationnovelR507I0.44
UCECchr1585580610Missense_MutationnovelS848P0.38
UCECchr1585581696Missense_MutationnovelA1210S0.61
UCECchr1585669742SilentnovelQ1671Q0.47
UCECchr1585743673Missense_MutationnovelL2747R0.28
UCECchr15853807765'UTRnovel0.33
UCECchr15857476403'UTRnovel0.37
UCECchr1585723173Missense_MutationNAR2200C0.5
UCECchr15857477613'UTRrs7502281840.4
UCECchr15857477743'UTRnovel0.47
UCECchr1585579262SilentNAD398D0.14
UCECchr1585579783Missense_Mutationrs779495573R572Q0.07
UCECchr1585581519Nonsense_MutationNAE1151*0.3
UCECchr1585581949Missense_MutationnovelS1294I0.1
UCECchr1585684753Missense_Mutationrs767513056E1723D0.3
UCECchr1585726439Missense_MutationNAL2259V0.31
UCECchr1585579770Missense_MutationnovelT568A0.25
UCECchr1585580406Missense_MutationnovelI780L0.28
UCECchr1585580970Missense_MutationnovelI968L0.17
UCECchr1585684790Missense_MutationnovelD1736Y0.15
UCECchr1585741232Missense_MutationnovelR2599C0.2
UCECchr15857479553'UTRnovel0.42
UCECchr1585575134Missense_MutationnovelE222D0.2
UCECchr1585581614Missense_MutationnovelE1182D0.48
UCECchr1585710592Missense_MutationnovelS1849I0.27
UCECchr1585575219Missense_MutationnovelD251N0.5
UCECchr1585580414SilentnovelD782D0.09
UCECchr1585727204Nonsense_Mutationrs770562501R2321*0.31
UCECchr1585533700Missense_MutationnovelA100T0.27
UCECchr1585579181Frame_Shift_InsnovelN373Kfs*20.37
UCECchr1585655665SilentnovelI1541I0.42
UCECchr1585533655Missense_MutationnovelA85T0.34
UCECchr1585543814Missense_MutationNAL174P0.44
UCECchr1585693296Missense_MutationnovelD1770V0.42
UCECchr1585579076SilentnovelT336T0.45
UCECchr1585684824Missense_MutationnovelR1747H0.19
UCECchr1585655639Missense_Mutationrs147374322V1533M0.2
UCECchr1585533661Nonsense_MutationNAE87*0.38
UCECchr1585580301Missense_Mutationrs747774362D745Y0.49
UCECchr1585580449Missense_MutationNAE794A0.54
UCECchr15857477963'UTRnovel0.47
UCECchr1585579553Missense_MutationnovelK495N0.3
UCECchr1585719230Missense_MutationNAF2052L0.44
UCECchr1585662409Intronrs7679983790.3
UCECchr1585543811Missense_MutationnovelR173L0.21
UCECchr1585579052Missense_MutationnovelQ328H0.22
UCECchr1585579252Missense_MutationnovelS395Y0.17
UCECchr1585579614Missense_MutationnovelA516S0.45
UCECchr1585580846SilentnovelQ926Q0.22
UCECchr1585581164SilentNAA1032A0.11
UCECchr1585684860Missense_MutationnovelS1759I0.15
UCECchr1585717293SilentnovelV1913V0.05
UCECchr1585743561Missense_MutationnovelP2710S0.26
UCECchr1585708026Silentrs542222585S1824S0.32
UCECchr1585735097Missense_Mutationrs140687997R2463Q0.38
UCECchr1585533752Missense_MutationNAR117H0.25
UCECchr1585581329SilentNAV1087V0.36
UCECchr1585669760SilentNAC1677C0.28
UCECchr1585717387Missense_MutationnovelS1945P0.09
UCECchr1585735142Missense_MutationNAA2478D0.29
UCECchr1585730575Missense_Mutationrs779871275R2384W0.37
UCECchr1585715887Missense_Mutationrs371321602S1900L0.44
UCECchr1585723260Missense_Mutationrs199748104R2229W0.31
UCECchr15857460943'UTRnovel0.39
UCECchr15857475263'UTRnovel0.17
UCECchr1585579054Missense_Mutationrs115657055R329Q0.3
UCECchr1585715841Missense_Mutationrs374094093A1885T0.3
UCECchr1585722314Missense_MutationNAV2155I0.37
UCSchr1585682162SilentnovelS1702S0.18
UCSchr1585579304Silentrs140888795T412T0.49
UCSchr1585715840SilentnovelT1884T0.23
UVMchr1585581803SilentnovelA1245A0.26
UVMchr1585581231Missense_Mutationrs753131765D1055N0.31

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
CESCAMP0.21360.0058042
LGGAMP0.02140.19963
PAADAMP0.07610.20695
PAADDEL0.10330.13216
SKCMAMP0.25349.6912e-06

Survival Analysis
CancerP-value Q-value
THYM0.028

Kaplan-Meier Survival Analysis

KIRC0.00047

Kaplan-Meier Survival Analysis

MESO0.017

Kaplan-Meier Survival Analysis

SKCM0.0001

Kaplan-Meier Survival Analysis

BLCA0.019

Kaplan-Meier Survival Analysis

LIHC0.0067

Kaplan-Meier Survival Analysis

DLBC0.045

Kaplan-Meier Survival Analysis

LGG0.0053

Kaplan-Meier Survival Analysis

LUAD0.0084

Kaplan-Meier Survival Analysis

UVM0.00038

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000170776 (Gene tree)
Gene ID
11214
Gene Symbol
AKAP13
Alias
Ht31|BRX|AKAP-Lbc|c-lbc|PROTO-LB|HA-3|ARHGEF13|LBC
Full Name
A-kinase anchoring protein 13
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
368,788 bases
Position
chr15:85,380,571-85,749,358
Accession
371
RBP type
non-canonical RBP
Summary
The A-kinase anchor proteins (AKAPs) are a group of structurally diverse proteins which have the common function of binding to the regulatory subunit of protein kinase A (PKA) and confining the holoenzyme to discrete locations within the cell. This gene encodes a member of the AKAP family. Alternative splicing of this gene results in multiple transcript variants encoding different isoforms containing c-terminal dbl oncogene homology (DH) and pleckstrin homology (PH) domains. The DH domain is associated with guanine nucleotide exchange activation for the Rho/Rac family of small GTP binding proteins, resulting in the conversion of the inactive GTPase to the active form capable of transducing signals. The PH domain has multiple functions. Therefore, these isoforms function as scaffolding proteins to coordinate a Rho signaling pathway, function as protein kinase A-anchoring proteins and, in addition, enhance ligand-dependent activity of estrogen receptors alpha and beta. [provided by RefSeq, Jul 2012]
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
1869528A major substrate of maturation promoting factor identified as elongation factor 1 beta gamma delta in Xenopus laevis.J Biol Chem1991 Aug 15Janssen GM-
17762649Upregulation of AT1 receptor gene on activation of protein kinase Cbeta/nicotinamide adenine dinucleotide diphosphate oxidase/ERK1/2/c-fos signaling cascade mediates long-term pressor effect of angiotensin II in rostral ventrolateral medulla.J Hypertens2007 SepChan SH-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000560302AKAP13-2173765-ENSP00000453634179 (aa)-Q12802
ENST00000560579AKAP13-2214290-ENSP000004777801429 (aa)-A0A087WTD7
ENST00000558644AKAP13-2081401--- (aa)--
ENST00000361243AKAP13-2019468-ENSP000003547182817 (aa)-Q12802
ENST00000560571AKAP13-220712--- (aa)--
ENST00000558092AKAP13-206620--- (aa)--
ENST00000559486AKAP13-213827-ENSP00000453205275 (aa)-H0YLH1
ENST00000559362AKAP13-2115459-ENSP000004537681745 (aa)-H0YMW2
ENST00000558166AKAP13-207558-ENSP0000045262293 (aa)-H0YK18
ENST00000557852AKAP13-204660-ENSP00000480789166 (aa)